@jbrowse/plugin-data-management 2.1.3 → 2.1.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/AddConnectionWidget/components/AddConnectionWidget.d.ts +4 -7
- package/dist/AddConnectionWidget/components/AddConnectionWidget.js +15 -20
- package/dist/AddConnectionWidget/components/AddConnectionWidget.js.map +1 -1
- package/dist/AddConnectionWidget/components/ConfigureConnection.d.ts +9 -1
- package/dist/AddConnectionWidget/components/ConfigureConnection.js +3 -3
- package/dist/AddConnectionWidget/components/ConfigureConnection.js.map +1 -1
- package/dist/AddConnectionWidget/components/ConnectionTypeSelect.d.ts +4 -4
- package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js +6 -12
- package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js.map +1 -1
- package/dist/AddConnectionWidget/index.d.ts +2 -2
- package/dist/AddConnectionWidget/index.js.map +1 -1
- package/dist/AddConnectionWidget/model.js.map +1 -1
- package/dist/AddTrackWidget/index.d.ts +2 -2
- package/dist/AddTrackWidget/index.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/Header.js +2 -3
- package/dist/HierarchicalTrackSelectorWidget/components/Header.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js +6 -7
- package/dist/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.d.ts +2 -2
- package/dist/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js +10 -13
- package/dist/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/model.js +13 -17
- package/dist/HierarchicalTrackSelectorWidget/model.js.map +1 -1
- package/dist/PluginStoreWidget/index.d.ts +2 -2
- package/dist/PluginStoreWidget/index.js.map +1 -1
- package/dist/ucsc-trackhub/model.d.ts +16 -4
- package/dist/ucsc-trackhub/ucscTrackHub.d.ts +3 -3
- package/esm/AddConnectionWidget/components/AddConnectionWidget.d.ts +4 -7
- package/esm/AddConnectionWidget/components/AddConnectionWidget.js +16 -21
- package/esm/AddConnectionWidget/components/AddConnectionWidget.js.map +1 -1
- package/esm/AddConnectionWidget/components/ConfigureConnection.d.ts +9 -1
- package/esm/AddConnectionWidget/components/ConfigureConnection.js +3 -3
- package/esm/AddConnectionWidget/components/ConfigureConnection.js.map +1 -1
- package/esm/AddConnectionWidget/components/ConnectionTypeSelect.d.ts +4 -4
- package/esm/AddConnectionWidget/components/ConnectionTypeSelect.js +6 -12
- package/esm/AddConnectionWidget/components/ConnectionTypeSelect.js.map +1 -1
- package/esm/AddConnectionWidget/index.d.ts +2 -2
- package/esm/AddConnectionWidget/index.js.map +1 -1
- package/esm/AddConnectionWidget/model.js.map +1 -1
- package/esm/AddTrackWidget/index.d.ts +2 -2
- package/esm/AddTrackWidget/index.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/Header.js +2 -3
- package/esm/HierarchicalTrackSelectorWidget/components/Header.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js +6 -7
- package/esm/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.d.ts +2 -2
- package/esm/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js +8 -13
- package/esm/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/model.js +14 -18
- package/esm/HierarchicalTrackSelectorWidget/model.js.map +1 -1
- package/esm/PluginStoreWidget/index.d.ts +2 -2
- package/esm/PluginStoreWidget/index.js.map +1 -1
- package/esm/ucsc-trackhub/model.d.ts +16 -4
- package/esm/ucsc-trackhub/ucscTrackHub.d.ts +3 -3
- package/package.json +3 -3
- package/src/AddConnectionWidget/components/{AddConnectionWidget.js → AddConnectionWidget.tsx} +28 -33
- package/src/AddConnectionWidget/components/ConfigureConnection.tsx +26 -0
- package/src/AddConnectionWidget/components/ConnectionTypeSelect.tsx +43 -52
- package/src/AddConnectionWidget/components/__snapshots__/AddConnectionWidget.test.js.snap +8 -8
- package/src/AddConnectionWidget/{index.js → index.ts} +0 -0
- package/src/AddConnectionWidget/{model.js → model.ts} +0 -0
- package/src/AddTrackWidget/components/AddTrackWidget.test.tsx +75 -85
- package/src/AddTrackWidget/{index.js → index.ts} +0 -0
- package/src/HierarchicalTrackSelectorWidget/components/Header.tsx +2 -2
- package/src/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.test.tsx +7 -15
- package/src/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.tsx +13 -15
- package/src/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.tsx +9 -14
- package/src/HierarchicalTrackSelectorWidget/components/__snapshots__/HierarchicalTrackSelector.test.tsx.snap +2 -2
- package/src/HierarchicalTrackSelectorWidget/model.ts +25 -20
- package/src/PluginStoreWidget/components/__snapshots__/PluginStoreWidget.test.js.snap +2 -2
- package/src/PluginStoreWidget/{index.js → index.ts} +0 -0
- package/src/AddConnectionWidget/components/ConfigureConnection.js +0 -20
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/// <reference types="react" />
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declare function AddConnectionWidget({ model }: {
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model: unknown;
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}): JSX.Element;
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declare
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namespace propTypes {
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const model: import("prop-types").Validator<any>;
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}
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}
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declare const _default: typeof AddConnectionWidget;
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export default _default;
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@@ -52,25 +52,25 @@ const useStyles = (0, mui_1.makeStyles)()(theme => ({
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}));
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const steps = ['Select a Connection Type', 'Configure Connection'];
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function AddConnectionWidget({ model }) {
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const [connectionType, setConnectionType] = (0, react_1.useState)(
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const [configModel, setConfigModel] = (0, react_1.useState)(
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const [configModelReady, setConfigModelReady] = (0, react_1.useState)(true);
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const [connectionType, setConnectionType] = (0, react_1.useState)();
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const [configModel, setConfigModel] = (0, react_1.useState)();
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const [activeStep, setActiveStep] = (0, react_1.useState)(0);
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const { classes } = useStyles();
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const session = (0, util_1.getSession)(model);
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const { pluginManager } = (0, mobx_state_tree_1.getEnv)(session);
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function handleSetConnectionType(newConnectionType) {
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setConnectionType(newConnectionType);
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setConfigModel(newConnectionType.configSchema.create({
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connectionId: `${newConnectionType.name}-${Date.now()}`,
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}, (0, mobx_state_tree_1.getEnv)(model)));
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}
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function stepContent() {
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switch (activeStep) {
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case 0:
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return (react_1.default.createElement(ConnectionTypeSelect_1.default, { connectionTypeChoices: pluginManager.getElementTypesInGroup('connection'), connectionType: connectionType, setConnectionType:
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return (react_1.default.createElement(ConnectionTypeSelect_1.default, { connectionTypeChoices: pluginManager.getElementTypesInGroup('connection'), connectionType: connectionType, setConnectionType: c => {
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setConnectionType(c);
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if (c) {
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setConfigModel(c.configSchema.create({
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connectionId: `${c.name}-${Date.now()}`,
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}, (0, mobx_state_tree_1.getEnv)(model)));
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}
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} }));
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case 1:
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return (react_1.default.createElement(ConfigureConnection_1.default, { connectionType: connectionType, model: configModel,
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return connectionType && configModel ? (react_1.default.createElement(ConfigureConnection_1.default, { connectionType: connectionType, model: configModel, session: session })) : null;
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default:
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return react_1.default.createElement(material_1.Typography, null, "Unknown step");
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}
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}
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function handleFinish() {
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const connectionConf = session.addConnectionConf(configModel);
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session.makeConnection
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if (session.makeConnection) {
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session.makeConnection(connectionConf);
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}
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session.hideWidget(model);
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}
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function checkNextEnabled() {
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(activeStep === 1 && configModel && configModelReady)) {
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return true;
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}
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return false;
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return ((activeStep === 0 && connectionType) || (activeStep === 1 && configModel));
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}
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return (react_1.default.createElement("div", { className: classes.root },
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react_1.default.createElement(material_1.Stepper, { className: classes.stepper, activeStep: activeStep, orientation: "vertical" }, steps.map(label => (react_1.default.createElement(material_1.Step, { key: label },
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react_1.default.createElement(material_1.Button, { disabled: activeStep === 0, onClick: handleBack, className: classes.button }, "Back"),
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react_1.default.createElement(material_1.Button, { disabled: !checkNextEnabled(), variant: "contained", color: "primary", onClick: handleNext, className: classes.button, "data-testid": "addConnectionNext" }, activeStep === steps.length - 1 ? 'Connect' : 'Next')))))))));
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}
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AddConnectionWidget.propTypes = {
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model: mobx_react_1.PropTypes.observableObject.isRequired,
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};
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exports.default = (0, mobx_react_1.observer)(AddConnectionWidget);
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//# sourceMappingURL=AddConnectionWidget.js.map
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{"version":3,"file":"AddConnectionWidget.js","sourceRoot":"","sources":["../../../src/AddConnectionWidget/components/AddConnectionWidget.
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{"version":3,"file":"AddConnectionWidget.js","sourceRoot":"","sources":["../../../src/AddConnectionWidget/components/AddConnectionWidget.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,6CAA+C;AAC/C,4CAOsB;AACtB,uCAA0C;AAC1C,2CAAqC;AACrC,qDAAwC;AAGxC,SAAS;AACT,gFAAuD;AACvD,kFAAyD;AAGzD,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,IAAI,EAAE;QACJ,SAAS,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC5B;IACD,OAAO,EAAE;QACP,eAAe,EAAE,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,OAAO;KAClD;IACD,MAAM,EAAE;QACN,SAAS,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAC3B,WAAW,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC9B;IACD,gBAAgB,EAAE;QAChB,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC/B;CACF,CAAC,CAAC,CAAA;AAEH,MAAM,KAAK,GAAG,CAAC,0BAA0B,EAAE,sBAAsB,CAAC,CAAA;AAElE,SAAS,mBAAmB,CAAC,EAAE,KAAK,EAAsB;IACxD,MAAM,CAAC,cAAc,EAAE,iBAAiB,CAAC,GAAG,IAAA,gBAAQ,GAAkB,CAAA;IACtE,MAAM,CAAC,WAAW,EAAE,cAAc,CAAC,GAAG,IAAA,gBAAQ,GAAyB,CAAA;IACvE,MAAM,CAAC,UAAU,EAAE,aAAa,CAAC,GAAG,IAAA,gBAAQ,EAAC,CAAC,CAAC,CAAA;IAC/C,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAE/B,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;IAEjC,MAAM,EAAE,aAAa,EAAE,GAAG,IAAA,wBAAM,EAAC,OAAO,CAAC,CAAA;IAEzC,SAAS,WAAW;QAClB,QAAQ,UAAU,EAAE;YAClB,KAAK,CAAC;gBACJ,OAAO,CACL,8BAAC,8BAAoB,IACnB,qBAAqB,EAAE,aAAa,CAAC,sBAAsB,CACzD,YAAY,CACb,EACD,cAAc,EAAE,cAAc,EAC9B,iBAAiB,EAAE,CAAC,CAAC,EAAE;wBACrB,iBAAiB,CAAC,CAAC,CAAC,CAAA;wBACpB,IAAI,CAAC,EAAE;4BACL,cAAc,CACZ,CAAC,CAAC,YAAY,CAAC,MAAM,CACnB;gCACE,YAAY,EAAE,GAAG,CAAC,CAAC,IAAI,IAAI,IAAI,CAAC,GAAG,EAAE,EAAE;6BACxC,EACD,IAAA,wBAAM,EAAC,KAAK,CAAC,CACd,CACF,CAAA;yBACF;oBACH,CAAC,GACD,CACH,CAAA;YACH,KAAK,CAAC;gBACJ,OAAO,cAAc,IAAI,WAAW,CAAC,CAAC,CAAC,CACrC,8BAAC,6BAAmB,IAClB,cAAc,EAAE,cAAc,EAC9B,KAAK,EAAE,WAAW,EAClB,OAAO,EAAE,OAAO,GAChB,CACH,CAAC,CAAC,CAAC,IAAI,CAAA;YAEV;gBACE,OAAO,8BAAC,qBAAU,uBAA0B,CAAA;SAC/C;IACH,CAAC;IAED,SAAS,UAAU;QACjB,IAAI,UAAU,KAAK,KAAK,CAAC,MAAM,GAAG,CAAC,EAAE;YACnC,YAAY,EAAE,CAAA;SACf;aAAM;YACL,aAAa,CAAC,UAAU,GAAG,CAAC,CAAC,CAAA;SAC9B;IACH,CAAC;IAED,SAAS,UAAU;QACjB,aAAa,CAAC,UAAU,GAAG,CAAC,CAAC,CAAA;IAC/B,CAAC;IAED,SAAS,YAAY;QACnB,MAAM,cAAc,GAAG,OAAO,CAAC,iBAAiB,CAAC,WAAW,CAAC,CAAA;QAC7D,IAAI,OAAO,CAAC,cAAc,EAAE;YAC1B,OAAO,CAAC,cAAc,CAAC,cAAc,CAAC,CAAA;SACvC;QACD,OAAO,CAAC,UAAU,CAAC,KAAK,CAAC,CAAA;IAC3B,CAAC;IAED,SAAS,gBAAgB;QACvB,OAAO,CACL,CAAC,UAAU,KAAK,CAAC,IAAI,cAAc,CAAC,IAAI,CAAC,UAAU,KAAK,CAAC,IAAI,WAAW,CAAC,CAC1E,CAAA;IACH,CAAC;IAED,OAAO,CACL,uCAAK,SAAS,EAAE,OAAO,CAAC,IAAI;QAC1B,8BAAC,kBAAO,IACN,SAAS,EAAE,OAAO,CAAC,OAAO,EAC1B,UAAU,EAAE,UAAU,EACtB,WAAW,EAAC,UAAU,IAErB,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,CAClB,8BAAC,eAAI,IAAC,GAAG,EAAE,KAAK;YACd,8BAAC,oBAAS,QAAE,KAAK,CAAa;YAC9B,8BAAC,sBAAW;gBACT,WAAW,EAAE;gBACd,uCAAK,SAAS,EAAE,OAAO,CAAC,gBAAgB;oBACtC,8BAAC,iBAAM,IACL,QAAQ,EAAE,UAAU,KAAK,CAAC,EAC1B,OAAO,EAAE,UAAU,EACnB,SAAS,EAAE,OAAO,CAAC,MAAM,WAGlB;oBACT,8BAAC,iBAAM,IACL,QAAQ,EAAE,CAAC,gBAAgB,EAAE,EAC7B,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,UAAU,EACnB,SAAS,EAAE,OAAO,CAAC,MAAM,iBACb,mBAAmB,IAE9B,UAAU,KAAK,KAAK,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,MAAM,CAC9C,CACL,CACM,CACT,CACR,CAAC,CACM,CACN,CACP,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,mBAAmB,CAAC,CAAA"}
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{"version":3,"file":"ConfigureConnection.js","sourceRoot":"","sources":["../../../src/AddConnectionWidget/components/ConfigureConnection.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,0DAA4D;AAC5D,2CAAqC;AAKrC,MAAM,mBAAmB,GAAG,IAAA,qBAAQ,EAClC,CAAC,KAIA,EAAE,EAAE;IACH,MAAM,EAAE,cAAc,EAAE,KAAK,EAAE,OAAO,EAAE,GAAG,KAAK,CAAA;IAChD,MAAM,qBAAqB,GACzB,cAAc,CAAC,qBAAqB,IAAI,mCAAmB,CAAA;IAE7D,OAAO,CACL,8BAAC,gBAAQ,IAAC,QAAQ,EAAE,wDAAqB;QACvC,8BAAC,qBAAqB,IAAC,KAAK,EAAE,EAAE,MAAM,EAAE,KAAK,EAAE,EAAE,OAAO,EAAE,OAAO,GAAI,CAC5D,CACZ,CAAA;AACH,CAAC,CACF,CAAA;AAED,kBAAe,mBAAmB,CAAA"}
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+
// icons
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const OpenInNew_1 = __importDefault(require("@mui/icons-material/OpenInNew"));
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32
33
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function ConnectionTypeSelect(props) {
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const { connectionTypeChoices, connectionType, setConnectionType } = props;
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(0, react_1.useEffect)(() => {
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if (!connectionType
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36
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+
if (!connectionType) {
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36
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setConnectionType(connectionTypeChoices[0]);
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}
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});
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39
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-
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40
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-
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-
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-
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return null;
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}
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-
return (react_1.default.createElement("form", { autoComplete: "off" },
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46
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-
react_1.default.createElement(material_1.TextField, { value: connectionType.name, label: "connectionType", helperText: connectionType.description ? (react_1.default.createElement(react_1.default.Fragment, null,
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47
|
-
connectionType.description,
|
|
48
|
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connectionType.url ? (react_1.default.createElement(material_1.IconButton, { href: connectionType.url, rel: "noopener noreferrer", target: "_blank", color: "secondary" },
|
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49
|
-
react_1.default.createElement(OpenInNew_1.default, null))) : null)) : null, select: true, fullWidth: true, onChange: handleChange, variant: "outlined" }, connectionTypeChoices.map((connectionTypeChoice) => (react_1.default.createElement(material_1.MenuItem, { key: connectionTypeChoice.name, value: connectionTypeChoice.name }, connectionTypeChoice.displayName || connectionTypeChoice.name))))));
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40
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+
return (react_1.default.createElement("form", { autoComplete: "off" }, connectionType ? (react_1.default.createElement(material_1.TextField, { value: connectionType.name, label: "connectionType", helperText: connectionType.description ? (react_1.default.createElement(react_1.default.Fragment, null,
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41
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+
connectionType.description,
|
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42
|
+
connectionType.url ? (react_1.default.createElement(material_1.IconButton, { href: connectionType.url, rel: "noopener noreferrer", target: "_blank", color: "secondary" },
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43
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+
react_1.default.createElement(OpenInNew_1.default, null))) : null)) : null, select: true, fullWidth: true, onChange: event => setConnectionType(connectionTypeChoices.find(c => c.name === event.target.value)), variant: "outlined" }, connectionTypeChoices.map(c => (react_1.default.createElement(material_1.MenuItem, { key: c.name, value: c.name }, c.displayName || c.name))))) : null));
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50
44
|
}
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51
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|
exports.default = ConnectionTypeSelect;
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52
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//# sourceMappingURL=ConnectionTypeSelect.js.map
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"ConnectionTypeSelect.js","sourceRoot":"","sources":["../../../src/AddConnectionWidget/components/ConnectionTypeSelect.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAwC;AACxC,4CAA+D;
|
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1
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+
{"version":3,"file":"ConnectionTypeSelect.js","sourceRoot":"","sources":["../../../src/AddConnectionWidget/components/ConnectionTypeSelect.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAwC;AACxC,4CAA+D;AAG/D,QAAQ;AACR,8EAAyD;AAEzD,SAAS,oBAAoB,CAAC,KAI7B;IACC,MAAM,EAAE,qBAAqB,EAAE,cAAc,EAAE,iBAAiB,EAAE,GAAG,KAAK,CAAA;IAE1E,IAAA,iBAAS,EAAC,GAAG,EAAE;QACb,IAAI,CAAC,cAAc,EAAE;YACnB,iBAAiB,CAAC,qBAAqB,CAAC,CAAC,CAAC,CAAC,CAAA;SAC5C;IACH,CAAC,CAAC,CAAA;IAEF,OAAO,CACL,wCAAM,YAAY,EAAC,KAAK,IACrB,cAAc,CAAC,CAAC,CAAC,CAChB,8BAAC,oBAAS,IACR,KAAK,EAAE,cAAc,CAAC,IAAI,EAC1B,KAAK,EAAC,gBAAgB,EACtB,UAAU,EACR,cAAc,CAAC,WAAW,CAAC,CAAC,CAAC,CAC3B;YACG,cAAc,CAAC,WAAW;YAC1B,cAAc,CAAC,GAAG,CAAC,CAAC,CAAC,CACpB,8BAAC,qBAAU,IACT,IAAI,EAAE,cAAc,CAAC,GAAG,EACxB,GAAG,EAAC,qBAAqB,EACzB,MAAM,EAAC,QAAQ,EACf,KAAK,EAAC,WAAW;gBAEjB,8BAAC,mBAAa,OAAG,CACN,CACd,CAAC,CAAC,CAAC,IAAI,CACP,CACJ,CAAC,CAAC,CAAC,IAAI,EAEV,MAAM,QACN,SAAS,QACT,QAAQ,EAAE,KAAK,CAAC,EAAE,CAChB,iBAAiB,CACf,qBAAqB,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,CAC/D,EAEH,OAAO,EAAC,UAAU,IAEjB,qBAAqB,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAC9B,8BAAC,mBAAQ,IAAC,GAAG,EAAE,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,CAAC,CAAC,IAAI,IACjC,CAAC,CAAC,WAAW,IAAI,CAAC,CAAC,IAAI,CACf,CACZ,CAAC,CACQ,CACb,CAAC,CAAC,CAAC,IAAI,CACH,CACR,CAAA;AACH,CAAC;AAED,kBAAe,oBAAoB,CAAA"}
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@@ -1,2 +1,2 @@
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1
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-
export { default as stateModel } from
|
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2
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-
export const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
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1
|
+
export { default as stateModel } from './model';
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2
|
+
export declare const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/AddConnectionWidget/index.
|
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1
|
+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/AddConnectionWidget/index.ts"],"names":[],"mappings":";;;;;;AAAA,+DAAiE;AAEjE,iCAA+C;AAAtC,oHAAA,OAAO,OAAc;AACjB,QAAA,YAAY,GAAG,IAAA,mCAAmB,EAAC,qBAAqB,EAAE,EAAE,CAAC,CAAA"}
|
|
@@ -1 +1 @@
|
|
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1
|
-
{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/AddConnectionWidget/model.
|
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1
|
+
{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/AddConnectionWidget/model.ts"],"names":[],"mappings":";;AAAA,qDAAuC;AACvC,sDAAwD;AAExD,kBAAe,uBAAK,CAAC,KAAK,CAAC,oBAAoB,EAAE;IAC/C,EAAE,EAAE,eAAS;IACb,IAAI,EAAE,uBAAK,CAAC,OAAO,CAAC,qBAAqB,CAAC;CAC3C,CAAC,CAAA"}
|
|
@@ -1,2 +1,2 @@
|
|
|
1
|
-
export { default as stateModelFactory } from
|
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2
|
-
export const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
|
|
1
|
+
export { default as stateModelFactory } from './model';
|
|
2
|
+
export declare const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/AddTrackWidget/index.
|
|
1
|
+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/AddTrackWidget/index.ts"],"names":[],"mappings":";;;;;;AAAA,+DAAiE;AAEjE,iCAAsD;AAA7C,2HAAA,OAAO,OAAqB;AACxB,QAAA,YAAY,GAAG,IAAA,mCAAmB,EAAC,gBAAgB,EAAE,EAAE,CAAC,CAAA"}
|
|
@@ -65,7 +65,6 @@ function HierarchicalTrackSelectorHeader({ model, setHeaderHeight, setAssemblyId
|
|
|
65
65
|
const [connectionManagerOpen, setConnectionManagerOpen] = (0, react_1.useState)(false);
|
|
66
66
|
const [connectionToggleOpen, setConnectionToggleOpen] = (0, react_1.useState)(false);
|
|
67
67
|
const { assemblyNames } = model;
|
|
68
|
-
const assemblyName = assemblyNames[assemblyIdx];
|
|
69
68
|
function breakConnection(connectionConf, deletingConnection) {
|
|
70
69
|
const name = (0, configuration_1.readConfObject)(connectionConf, 'name');
|
|
71
70
|
// @ts-ignore
|
|
@@ -132,7 +131,7 @@ function HierarchicalTrackSelectorHeader({ model, setHeaderHeight, setAssemblyId
|
|
|
132
131
|
},
|
|
133
132
|
...assemblyMenuItems,
|
|
134
133
|
];
|
|
135
|
-
const items = (0, mobx_state_tree_1.getEnv)(model).pluginManager.evaluateExtensionPoint('TrackSelector-multiTrackMenuItems');
|
|
134
|
+
const items = (0, mobx_state_tree_1.getEnv)(model).pluginManager.evaluateExtensionPoint('TrackSelector-multiTrackMenuItems', [], { session });
|
|
136
135
|
return (react_1.default.createElement("div", { ref: ref => setHeaderHeight((ref === null || ref === void 0 ? void 0 : ref.getBoundingClientRect().height) || 0), "data-testid": "hierarchical_track_selector" },
|
|
137
136
|
react_1.default.createElement("div", { style: { display: 'flex' } },
|
|
138
137
|
(0, util_1.isSessionWithAddTracks)(session) && (react_1.default.createElement(material_1.IconButton, { className: classes.menuIcon, onClick: event => setMenuEl(event.currentTarget) },
|
|
@@ -171,7 +170,7 @@ function HierarchicalTrackSelectorHeader({ model, setHeaderHeight, setAssemblyId
|
|
|
171
170
|
modalInfo ? (react_1.default.createElement(CloseConnectionDialog, { modalInfo: modalInfo, setModalInfo: setModalInfo })) : null,
|
|
172
171
|
deleteDlgDetails ? (react_1.default.createElement(DeleteConnectionDialog, { handleClose: () => setDeleteDlgDetails(undefined), deleteDialogDetails: deleteDlgDetails, session: session })) : null,
|
|
173
172
|
connectionManagerOpen ? (react_1.default.createElement(ManageConnectionsDialog, { handleClose: () => setConnectionManagerOpen(false), breakConnection: breakConnection, session: session })) : null,
|
|
174
|
-
connectionToggleOpen ? (react_1.default.createElement(ToggleConnectionsDialog, { handleClose: () => setConnectionToggleOpen(false), session: session, breakConnection: breakConnection
|
|
173
|
+
connectionToggleOpen ? (react_1.default.createElement(ToggleConnectionsDialog, { handleClose: () => setConnectionToggleOpen(false), session: session, breakConnection: breakConnection })) : null)));
|
|
175
174
|
}
|
|
176
175
|
exports.default = (0, mobx_react_1.observer)(HierarchicalTrackSelectorHeader);
|
|
177
176
|
//# sourceMappingURL=Header.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Header.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/Header.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuD;AACvD,uCAA0C;AAC1C,4CAA4E;AAC5E,QAAQ;AACR,sEAAiD;AACjD,oEAA+C;AAC/C,oFAA+D;AAC/D,kDAA8C;AAE9C,QAAQ;AACR,iEAA6D;AAC7D,6CAK2B;AAC3B,+DAGoC;AACpC,2CAAqC;AACrC,qDAAwC;AAKxC,kBAAkB;AAClB,MAAM,qBAAqB,GAAG,IAAA,YAAI,EAAC,GAAG,EAAE,mDAAQ,yBAAyB,GAAC,CAAC,CAAA;AAC3E,MAAM,sBAAsB,GAAG,IAAA,YAAI,EAAC,GAAG,EAAE,mDAAQ,0BAA0B,GAAC,CAAC,CAAA;AAC7E,MAAM,uBAAuB,GAAG,IAAA,YAAI,EAAC,GAAG,EAAE,mDAAQ,2BAA2B,GAAC,CAAC,CAAA;AAC/E,MAAM,uBAAuB,GAAG,IAAA,YAAI,EAAC,GAAG,EAAE,mDAAQ,2BAA2B,GAAC,CAAC,CAAA;AAE/E,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,SAAS,EAAE;QACT,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;IACD,QAAQ,EAAE;QACR,WAAW,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAC7B,YAAY,EAAE,CAAC;KAChB;CACF,CAAC,CAAC,CAAA;AAcH,SAAS,+BAA+B,CAAC,EACvC,KAAK,EACL,eAAe,EACf,cAAc,EACd,WAAW,GAMZ;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;IACjC,MAAM,CAAC,YAAY,EAAE,eAAe,CAAC,GAAG,IAAA,gBAAQ,GAAqB,CAAA;IACrE,MAAM,CAAC,WAAW,EAAE,cAAc,CAAC,GAAG,IAAA,gBAAQ,GAAqB,CAAA;IACnE,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,IAAA,gBAAQ,GAAqB,CAAA;IACzD,MAAM,CAAC,SAAS,EAAE,YAAY,CAAC,GAAG,IAAA,gBAAQ,GAAa,CAAA;IACvD,MAAM,CAAC,gBAAgB,EAAE,mBAAmB,CAAC,GAAG,IAAA,gBAAQ,GAAiB,CAAA;IACzE,MAAM,CAAC,qBAAqB,EAAE,wBAAwB,CAAC,GAAG,IAAA,gBAAQ,EAAC,KAAK,CAAC,CAAA;IACzE,MAAM,CAAC,oBAAoB,EAAE,uBAAuB,CAAC,GAAG,IAAA,gBAAQ,EAAC,KAAK,CAAC,CAAA;IACvE,MAAM,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;
|
|
1
|
+
{"version":3,"file":"Header.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/Header.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuD;AACvD,uCAA0C;AAC1C,4CAA4E;AAC5E,QAAQ;AACR,sEAAiD;AACjD,oEAA+C;AAC/C,oFAA+D;AAC/D,kDAA8C;AAE9C,QAAQ;AACR,iEAA6D;AAC7D,6CAK2B;AAC3B,+DAGoC;AACpC,2CAAqC;AACrC,qDAAwC;AAKxC,kBAAkB;AAClB,MAAM,qBAAqB,GAAG,IAAA,YAAI,EAAC,GAAG,EAAE,mDAAQ,yBAAyB,GAAC,CAAC,CAAA;AAC3E,MAAM,sBAAsB,GAAG,IAAA,YAAI,EAAC,GAAG,EAAE,mDAAQ,0BAA0B,GAAC,CAAC,CAAA;AAC7E,MAAM,uBAAuB,GAAG,IAAA,YAAI,EAAC,GAAG,EAAE,mDAAQ,2BAA2B,GAAC,CAAC,CAAA;AAC/E,MAAM,uBAAuB,GAAG,IAAA,YAAI,EAAC,GAAG,EAAE,mDAAQ,2BAA2B,GAAC,CAAC,CAAA;AAE/E,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,SAAS,EAAE;QACT,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;IACD,QAAQ,EAAE;QACR,WAAW,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAC7B,YAAY,EAAE,CAAC;KAChB;CACF,CAAC,CAAC,CAAA;AAcH,SAAS,+BAA+B,CAAC,EACvC,KAAK,EACL,eAAe,EACf,cAAc,EACd,WAAW,GAMZ;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;IACjC,MAAM,CAAC,YAAY,EAAE,eAAe,CAAC,GAAG,IAAA,gBAAQ,GAAqB,CAAA;IACrE,MAAM,CAAC,WAAW,EAAE,cAAc,CAAC,GAAG,IAAA,gBAAQ,GAAqB,CAAA;IACnE,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,IAAA,gBAAQ,GAAqB,CAAA;IACzD,MAAM,CAAC,SAAS,EAAE,YAAY,CAAC,GAAG,IAAA,gBAAQ,GAAa,CAAA;IACvD,MAAM,CAAC,gBAAgB,EAAE,mBAAmB,CAAC,GAAG,IAAA,gBAAQ,GAAiB,CAAA;IACzE,MAAM,CAAC,qBAAqB,EAAE,wBAAwB,CAAC,GAAG,IAAA,gBAAQ,EAAC,KAAK,CAAC,CAAA;IACzE,MAAM,CAAC,oBAAoB,EAAE,uBAAuB,CAAC,GAAG,IAAA,gBAAQ,EAAC,KAAK,CAAC,CAAA;IACvE,MAAM,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;IAE/B,SAAS,eAAe,CACtB,cAAqC,EACrC,kBAA4B;QAE5B,MAAM,IAAI,GAAG,IAAA,8BAAc,EAAC,cAAc,EAAE,MAAM,CAAC,CAAA;QAEnD,aAAa;QACb,MAAM,MAAM,GAAG,OAAO,CAAC,wBAAwB,CAAC,cAAc,CAAC,CAAA;QAC/D,IAAI,MAAM,EAAE;YACV,MAAM,CAAC,qBAAqB,EAAE,oBAAoB,CAAC,GAAG,MAAM,CAAA;YAC5D,IAAI,MAAM,CAAC,IAAI,CAAC,oBAAoB,CAAC,CAAC,MAAM,GAAG,CAAC,EAAE;gBAChD,YAAY,CAAC;oBACX,cAAc;oBACd,qBAAqB;oBACrB,oBAAoB;oBACpB,IAAI;iBACL,CAAC,CAAA;aACH;iBAAM;gBACL,qBAAqB,EAAE,CAAA;aACxB;SACF;QACD,IAAI,kBAAkB,EAAE;YACtB,mBAAmB,CAAC,EAAE,IAAI,EAAE,cAAc,EAAE,CAAC,CAAA;SAC9C;IACH,CAAC;IAED,MAAM,mBAAmB,GAAG;QAC1B;YACE,KAAK,EAAE,4BAA4B;YACnC,OAAO,EAAE,GAAG,EAAE,CAAC,uBAAuB,CAAC,IAAI,CAAC;SAC7C;KACF,CAAA;IAED,IAAI,IAAA,oCAA6B,EAAC,OAAO,CAAC,EAAE;QAC1C,mBAAmB,CAAC,OAAO,CAAC;YAC1B,KAAK,EAAE,gBAAgB;YACvB,OAAO,EAAE,GAAG,EAAE;gBACZ,IAAI,IAAA,gCAAyB,EAAC,OAAO,CAAC,EAAE;oBACtC,OAAO,CAAC,UAAU,CAChB,OAAO,CAAC,SAAS,CAAC,qBAAqB,EAAE,qBAAqB,CAAC,CAChE,CAAA;iBACF;YACH,CAAC;SACF,CAAC,CAAA;QAEF,mBAAmB,CAAC,IAAI,CAAC;YACvB,KAAK,EAAE,uBAAuB;YAC9B,OAAO,EAAE,GAAG,EAAE,CAAC,wBAAwB,CAAC,IAAI,CAAC;SAC9C,CAAC,CAAA;KACH;IAED,MAAM,iBAAiB,GACrB,aAAa,CAAC,MAAM,GAAG,CAAC;QACtB,CAAC,CAAC;YACE;gBACE,KAAK,EAAE,oBAAoB;gBAC3B,OAAO,EAAE,aAAa,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,GAAG,EAAE,EAAE,CAAC,CAAC;oBACzC,KAAK,EAAE,IAAI;oBACX,OAAO,EAAE,GAAG,EAAE,CAAC,cAAc,CAAC,GAAG,CAAC;iBACnC,CAAC,CAAC;aACJ;SACF;QACH,CAAC,CAAC,EAAE,CAAA;IAER,MAAM,SAAS,GAAG;QAChB;YACE,KAAK,EAAE,cAAc;YACrB,OAAO,EAAE,GAAG,EAAE;gBACZ,IAAI,IAAA,gCAAyB,EAAC,OAAO,CAAC,EAAE;oBACtC,OAAO,CAAC,UAAU,CAChB,OAAO,CAAC,SAAS,CAAC,gBAAgB,EAAE,gBAAgB,EAAE;wBACpD,IAAI,EAAE,KAAK,CAAC,IAAI,CAAC,EAAE;qBACpB,CAAC,CACH,CAAA;iBACF;YACH,CAAC;SACF;QAED,GAAG,iBAAiB;KACrB,CAAA;IAED,MAAM,KAAK,GAAG,IAAA,wBAAM,EAAC,KAAK,CAAC,CAAC,aAAa,CAAC,sBAAsB,CAC9D,mCAAmC,EACnC,EAAE,EACF,EAAE,OAAO,EAAE,CACE,CAAA;IACf,OAAO,CACL,uCACE,GAAG,EAAE,GAAG,CAAC,EAAE,CAAC,eAAe,CAAC,CAAA,GAAG,aAAH,GAAG,uBAAH,GAAG,CAAE,qBAAqB,GAAG,MAAM,KAAI,CAAC,CAAC,iBACzD,6BAA6B;QAEzC,uCAAK,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,EAAE;YAC5B,IAAA,6BAAsB,EAAC,OAAO,CAAC,IAAI,CAClC,8BAAC,qBAAU,IACT,SAAS,EAAE,OAAO,CAAC,QAAQ,EAC3B,OAAO,EAAE,KAAK,CAAC,EAAE,CAAC,SAAS,CAAC,KAAK,CAAC,aAAa,CAAC;gBAEhD,8BAAC,cAAQ,OAAG,CACD,CACd;YAEA,OAAO,CAAC,cAAc,IAAI,CACzB,8BAAC,qBAAU,IACT,SAAS,EAAE,OAAO,CAAC,QAAQ,EAC3B,OAAO,EAAE,KAAK,CAAC,EAAE,CAAC,eAAe,CAAC,KAAK,CAAC,aAAa,CAAC;gBAEtD,8BAAC,aAAK,OAAG,CACE,CACd;YAEA,KAAK,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,CACxB,8BAAC,qBAAU,IACT,SAAS,EAAE,OAAO,CAAC,QAAQ,EAC3B,OAAO,EAAE,KAAK,CAAC,EAAE,CAAC,cAAc,CAAC,KAAK,CAAC,aAAa,CAAC;gBAErD,8BAAC,gBAAK,IAAC,YAAY,EAAE,KAAK,CAAC,SAAS,CAAC,MAAM,EAAE,KAAK,EAAC,SAAS;oBAC1D,8BAAC,sBAAgB,OAAG,CACd,CACG,CACd,CAAC,CAAC,CAAC,IAAI;YAER,8BAAC,oBAAS,IACR,SAAS,EAAE,OAAO,CAAC,SAAS,EAC5B,KAAK,EAAC,eAAe,EACrB,KAAK,EAAE,KAAK,CAAC,UAAU,EACvB,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,KAAK,CAAC,aAAa,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,EAC1D,SAAS,QACT,UAAU,EAAE;oBACV,YAAY,EAAE,CACZ,8BAAC,yBAAc,IAAC,QAAQ,EAAC,KAAK;wBAC5B,8BAAC,qBAAU,IAAC,KAAK,EAAC,WAAW,EAAC,OAAO,EAAE,KAAK,CAAC,eAAe;4BAC1D,8BAAC,eAAS,OAAG,CACF,CACE,CAClB;iBACF,GACD,CACE;QACN,8BAAC,cAAW,IACV,QAAQ,EAAE,YAAY,EACtB,IAAI,EAAE,OAAO,CAAC,YAAY,CAAC,EAC3B,eAAe,EAAE,CAAC,CAAC,EAAE,QAAQ,EAAE,EAAE;gBAC/B,QAAQ,EAAE,CAAA;gBACV,eAAe,CAAC,SAAS,CAAC,CAAA;YAC5B,CAAC,EACD,OAAO,EAAE,GAAG,EAAE,CAAC,eAAe,CAAC,SAAS,CAAC,EACzC,SAAS,EAAE,mBAAmB,GAC9B;QACF,8BAAC,cAAW,IACV,QAAQ,EAAE,MAAM,EAChB,IAAI,EAAE,OAAO,CAAC,MAAM,CAAC,EACrB,eAAe,EAAE,CAAC,CAAC,EAAE,QAAQ,EAAE,EAAE;gBAC/B,QAAQ,EAAE,CAAA;gBACV,SAA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@@ -34,13 +34,12 @@ function ManageConnectionsDlg({ session, handleClose, breakConnection, }) {
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34
34
|
react_1.default.createElement("div", { className: classes.connectionContainer },
|
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connections.map(conf => {
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const name = (0, configuration_1.readConfObject)(conf, 'name');
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37
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-
return (react_1.default.createElement(
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react_1.default.createElement(material_1.
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react_1.default.createElement(
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name)));
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+
return (react_1.default.createElement(material_1.Typography, { key: `conn-${name}` },
|
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38
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+
adminMode || (sessionConnections === null || sessionConnections === void 0 ? void 0 : sessionConnections.includes(conf)) ? (react_1.default.createElement(material_1.IconButton, { onClick: () => breakConnection(conf, true) },
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39
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+
react_1.default.createElement(Close_1.default, { color: "error" }))) : (react_1.default.createElement(material_1.Tooltip, { title: "Unable to delete connection in config file as non-admin user" },
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react_1.default.createElement(material_1.IconButton, null,
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react_1.default.createElement(Close_1.default, { color: "disabled" })))),
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name));
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}),
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!connections.length ? (react_1.default.createElement(material_1.Typography, null, "No connections found")) : null)),
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react_1.default.createElement(material_1.DialogActions, null,
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"ManageConnectionsDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.tsx"],"names":[],"mappings":";;;;;AAAA,kDAAyB;AACzB,4CASsB;AACtB,uCAA0C;AAC1C,sEAAiD;AACjD,2CAAqC;AACrC,+DAGoC;AAGpC,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,WAAW,EAAE;QACX,QAAQ,EAAE,UAAU;QACpB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACvB,GAAG,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACrB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC;KAC/B;IAED,mBAAmB,EAAE;QACnB,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACxB,KAAK,EAAE,GAAG;KACX;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,oBAAoB,CAAC,EAC5B,OAAO,EACP,WAAW,EACX,eAAe,GAKhB;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EAAE,SAAS,EAAE,WAAW,EAAE,kBAAkB,EAAE,GAAG,OAAO,CAAA;IAC9D,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI,QAAC,OAAO,EAAE,WAAW,EAAE,QAAQ,EAAC,IAAI;QAC9C,8BAAC,sBAAW;;YAEV,8BAAC,qBAAU,IACT,SAAS,EAAE,OAAO,CAAC,WAAW,EAC9B,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE;gBAE5B,8BAAC,eAAS,OAAG,CACF,CACD;QACd,8BAAC,wBAAa;YACZ,8BAAC,qBAAU,gFAEE;YACb,uCAAK,SAAS,EAAE,OAAO,CAAC,mBAAmB;gBACxC,WAAW,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE;oBACtB,MAAM,IAAI,GAAG,IAAA,8BAAc,EAAC,IAAI,EAAE,MAAM,CAAC,CAAA;oBACzC,OAAO,CACL,
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1
|
+
{"version":3,"file":"ManageConnectionsDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.tsx"],"names":[],"mappings":";;;;;AAAA,kDAAyB;AACzB,4CASsB;AACtB,uCAA0C;AAC1C,sEAAiD;AACjD,2CAAqC;AACrC,+DAGoC;AAGpC,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,WAAW,EAAE;QACX,QAAQ,EAAE,UAAU;QACpB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACvB,GAAG,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACrB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC;KAC/B;IAED,mBAAmB,EAAE;QACnB,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACxB,KAAK,EAAE,GAAG;KACX;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,oBAAoB,CAAC,EAC5B,OAAO,EACP,WAAW,EACX,eAAe,GAKhB;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EAAE,SAAS,EAAE,WAAW,EAAE,kBAAkB,EAAE,GAAG,OAAO,CAAA;IAC9D,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI,QAAC,OAAO,EAAE,WAAW,EAAE,QAAQ,EAAC,IAAI;QAC9C,8BAAC,sBAAW;;YAEV,8BAAC,qBAAU,IACT,SAAS,EAAE,OAAO,CAAC,WAAW,EAC9B,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE;gBAE5B,8BAAC,eAAS,OAAG,CACF,CACD;QACd,8BAAC,wBAAa;YACZ,8BAAC,qBAAU,gFAEE;YACb,uCAAK,SAAS,EAAE,OAAO,CAAC,mBAAmB;gBACxC,WAAW,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE;oBACtB,MAAM,IAAI,GAAG,IAAA,8BAAc,EAAC,IAAI,EAAE,MAAM,CAAC,CAAA;oBACzC,OAAO,CACL,8BAAC,qBAAU,IAAC,GAAG,EAAE,QAAQ,IAAI,EAAE;wBAC5B,SAAS,KAAI,kBAAkB,aAAlB,kBAAkB,uBAAlB,kBAAkB,CAAE,QAAQ,CAAC,IAAI,CAAC,CAAA,CAAC,CAAC,CAAC,CACjD,8BAAC,qBAAU,IAAC,OAAO,EAAE,GAAG,EAAE,CAAC,eAAe,CAAC,IAAI,EAAE,IAAI,CAAC;4BACpD,8BAAC,eAAS,IAAC,KAAK,EAAC,OAAO,GAAG,CAChB,CACd,CAAC,CAAC,CAAC,CACF,8BAAC,kBAAO,IAAC,KAAK,EAAC,8DAA8D;4BAC3E,8BAAC,qBAAU;gCACT,8BAAC,eAAS,IAAC,KAAK,EAAC,UAAU,GAAG,CACnB,CACL,CACX;wBACA,IAAI,CACM,CACd,CAAA;gBACH,CAAC,CAAC;gBACD,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,CAAC,CACrB,8BAAC,qBAAU,+BAAkC,CAC9C,CAAC,CAAC,CAAC,IAAI,CACJ,CACQ;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IACL,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,EAC5B,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,YAGR,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,oBAAoB,CAAC,CAAA"}
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@@ -1,10 +1,10 @@
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1
1
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/// <reference types="react" />
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2
2
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import { AnyConfigurationModel } from '@jbrowse/core/configuration';
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3
3
|
import { AbstractSessionModel } from '@jbrowse/core/util';
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|
4
|
-
declare function
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4
|
+
export declare function ellipses(slug: string): string;
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5
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+
declare function ToggleConnectionDialog({ session, handleClose, breakConnection, }: {
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5
6
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handleClose: () => void;
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6
7
|
session: AbstractSessionModel;
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|
-
assemblyName: string;
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8
8
|
breakConnection: (arg: AnyConfigurationModel) => void;
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9
9
|
}): JSX.Element;
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10
10
|
declare const _default: typeof ToggleConnectionDialog;
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|
@@ -3,12 +3,17 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
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3
3
|
return (mod && mod.__esModule) ? mod : { "default": mod };
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4
4
|
};
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5
5
|
Object.defineProperty(exports, "__esModule", { value: true });
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6
|
+
exports.ellipses = void 0;
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6
7
|
const react_1 = __importDefault(require("react"));
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7
8
|
const material_1 = require("@mui/material");
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8
9
|
const mui_1 = require("tss-react/mui");
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9
10
|
const Close_1 = __importDefault(require("@mui/icons-material/Close"));
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10
11
|
const mobx_react_1 = require("mobx-react");
|
|
11
12
|
const configuration_1 = require("@jbrowse/core/configuration");
|
|
13
|
+
function ellipses(slug) {
|
|
14
|
+
return slug.length > 20 ? `${slug.slice(0, 20)}...` : slug;
|
|
15
|
+
}
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16
|
+
exports.ellipses = ellipses;
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const useStyles = (0, mui_1.makeStyles)()(theme => ({
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closeButton: {
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position: 'absolute',
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@@ -21,16 +26,9 @@ const useStyles = (0, mui_1.makeStyles)()(theme => ({
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margin: theme.spacing(4),
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function ToggleConnectionDialog({ session, handleClose,
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function ToggleConnectionDialog({ session, handleClose, breakConnection, }) {
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const { connections, connectionInstances: instances = [] } = session;
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const configAssemblyNames = (0, configuration_1.readConfObject)(c, 'assemblyNames');
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});
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react_1.default.createElement(material_1.DialogTitle, null,
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"Turn on/off connections",
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@@ -39,8 +37,9 @@ function ToggleConnectionDialog({ session, handleClose, assemblyName, breakConne
|
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react_1.default.createElement(material_1.DialogContent, null,
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react_1.default.createElement(material_1.Typography, null, "Use the checkbox to turn on/off connections"),
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react_1.default.createElement("div", { className: classes.connectionContainer },
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connections.map(conf => {
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const assemblyNames = (0, configuration_1.readConfObject)(conf, 'assemblyNames');
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const found = instances.find(conn => name === conn.name);
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return (react_1.default.createElement(material_1.FormControlLabel, { key: conf.connectionId, control: react_1.default.createElement(material_1.Checkbox, { checked: !!found, onChange: () => {
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@@ -50,11 +49,9 @@ function ToggleConnectionDialog({ session, handleClose, assemblyName, breakConne
|
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else {
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(_a = session.makeConnection) === null || _a === void 0 ? void 0 : _a.call(session, conf);
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}, color: "primary" }), label: name }));
|
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!
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"No connections found for ",
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assemblyName)) : null)),
|
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!connections.length ? (react_1.default.createElement(material_1.Typography, null, "No connections found")) : null)),
|
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react_1.default.createElement(material_1.DialogActions, null,
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react_1.default.createElement(material_1.Button, { onClick: () => handleClose(), variant: "contained", color: "primary" }, "Close"))));
|
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}
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@@ -1 +1 @@
|
|
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1
|
-
{"version":3,"file":"ToggleConnectionsDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.tsx"],"names":[],"mappings":"
|
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1
|
+
{"version":3,"file":"ToggleConnectionsDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.tsx"],"names":[],"mappings":";;;;;;AAAA,kDAAyB;AACzB,4CAUsB;AACtB,uCAA0C;AAC1C,sEAAiD;AACjD,2CAAqC;AACrC,+DAGoC;AAGpC,SAAgB,QAAQ,CAAC,IAAY;IACnC,OAAO,IAAI,CAAC,MAAM,GAAG,EAAE,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,CAAA;AAC5D,CAAC;AAFD,4BAEC;AAED,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,WAAW,EAAE;QACX,QAAQ,EAAE,UAAU;QACpB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACvB,GAAG,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACrB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC;KAC/B;IAED,mBAAmB,EAAE;QACnB,KAAK,EAAE,GAAG;QACV,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,sBAAsB,CAAC,EAC9B,OAAO,EACP,WAAW,EACX,eAAe,GAKhB;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EAAE,WAAW,EAAE,mBAAmB,EAAE,SAAS,GAAG,EAAE,EAAE,GAAG,OAAO,CAAA;IACpE,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI,QAAC,OAAO,EAAE,WAAW,EAAE,QAAQ,EAAC,IAAI;QAC9C,8BAAC,sBAAW;;YAEV,8BAAC,qBAAU,IACT,SAAS,EAAE,OAAO,CAAC,WAAW,EAC9B,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE;gBAE5B,8BAAC,eAAS,OAAG,CACF,CACD;QACd,8BAAC,wBAAa;YACZ,8BAAC,qBAAU,sDAAyD;YACpE,uCAAK,SAAS,EAAE,OAAO,CAAC,mBAAmB;gBACxC,WAAW,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE;oBACtB,MAAM,IAAI,GAAG,IAAA,8BAAc,EAAC,IAAI,EAAE,MAAM,CAAC,CAAA;oBACzC,MAAM,aAAa,GAAG,IAAA,8BAAc,EAAC,IAAI,EAAE,eAAe,CAAC,CAAA;oBAC3D,MAAM,KAAK,GAAG,SAAS,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,KAAK,IAAI,CAAC,IAAI,CAAC,CAAA;oBACxD,OAAO,CACL,8BAAC,2BAAgB,IACf,GAAG,EAAE,IAAI,CAAC,YAAY,EACtB,OAAO,EACL,8BAAC,mBAAQ,IACP,OAAO,EAAE,CAAC,CAAC,KAAK,EAChB,QAAQ,EAAE,GAAG,EAAE;;gCACb,IAAI,KAAK,EAAE;oCACT,eAAe,CAAC,IAAI,CAAC,CAAA;iCACtB;qCAAM;oCACL,MAAA,OAAO,CAAC,cAAc,wDAAG,IAAI,CAAC,CAAA;iCAC/B;4BACH,CAAC,EACD,KAAK,EAAC,SAAS,GACf,EAEJ,KAAK,EAAE,GAAG,IAAI,KAAK,QAAQ,CAAC,aAAa,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,GAAG,GACvD,CACH,CAAA;gBACH,CAAC,CAAC;gBACD,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,CAAC,CACrB,8BAAC,qBAAU,+BAAkC,CAC9C,CAAC,CAAC,CAAC,IAAI,CACJ,CACQ;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IACL,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,EAC5B,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,YAGR,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,sBAAsB,CAAC,CAAA"}
|
|
@@ -29,12 +29,9 @@ function filterTracks(tracks, self, assemblyName) {
|
|
|
29
29
|
if (!assembly) {
|
|
30
30
|
return [];
|
|
31
31
|
}
|
|
32
|
+
const { allAliases } = assembly;
|
|
32
33
|
return tracks
|
|
33
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.filter(c =>
|
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34
|
-
const trackConfAssemblies = (0, configuration_1.readConfObject)(c, 'assemblyNames');
|
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35
|
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const { allAliases } = assembly;
|
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36
|
-
return hasAnyOverlap(allAliases, trackConfAssemblies);
|
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37
|
-
})
|
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34
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+
.filter(c => hasAnyOverlap(allAliases, (0, configuration_1.readConfObject)(c, 'assemblyNames')))
|
|
38
35
|
.filter(c => {
|
|
39
36
|
const { displayTypes } = pluginManager.getViewType(self.view.type);
|
|
40
37
|
const compatDisplays = displayTypes.map((d) => d.name);
|
|
@@ -175,21 +172,20 @@ function stateTreeFactory(pluginManager) {
|
|
|
175
172
|
// eslint-disable-next-line @typescript-eslint/no-explicit-any
|
|
176
173
|
self, self.trackConfigurations(assemblyName), self.collapsed);
|
|
177
174
|
const session = (0, util_1.getSession)(self);
|
|
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|
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const {
|
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|
-
const
|
|
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|
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|
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|
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|
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187
|
-
children: this.connectionHierarchy(assemblyName, conn),
|
|
175
|
+
const { connectionInstances } = session;
|
|
176
|
+
const { assemblyManager } = (0, util_1.getSession)(self);
|
|
177
|
+
const assembly = assemblyManager.get(assemblyName);
|
|
178
|
+
const conns = (assembly &&
|
|
179
|
+
(connectionInstances === null || connectionInstances === void 0 ? void 0 : connectionInstances.filter(c => hasAnyOverlap(assembly.allAliases, (0, configuration_1.getConf)(c, 'assemblyNames'))).map(c => ({
|
|
180
|
+
// @ts-ignore
|
|
181
|
+
id: (0, mobx_state_tree_1.getSnapshot)(c).configuration,
|
|
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|
+
name: (0, configuration_1.getConf)(c, 'name'),
|
|
183
|
+
children: this.connectionHierarchy(assemblyName, c),
|
|
188
184
|
state: {
|
|
189
185
|
expanded: true,
|
|
190
186
|
},
|
|
191
|
-
}
|
|
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|
-
|
|
187
|
+
})))) ||
|
|
188
|
+
[];
|
|
193
189
|
return {
|
|
194
190
|
name: 'Root',
|
|
195
191
|
id: 'Root',
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/HierarchicalTrackSelectorWidget/model.ts"],"names":[],"mappings":";;;AAAA,
|
|
1
|
+
{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/HierarchicalTrackSelectorWidget/model.ts"],"names":[],"mappings":";;;AAAA,qDAMwB;AACxB,+DAIoC;AACpC,6CAA+C;AAC/C,sDAAwD;AAGxD,SAAS,aAAa,CAAI,KAAU,EAAE,EAAE,KAAU,EAAE;IAClD,OAAO,CAAC,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,EAAE,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAA;AAC/C,CAAC;AAED,SAAS,YAAY,CAAC,MAAc,EAAE,MAA6B;IACjE,MAAM,UAAU,GAAG,IAAA,8BAAc,EAAC,MAAM,EAAE,UAAU,CAAyB,CAAA;IAC7E,MAAM,WAAW,GAAG,MAAM,CAAC,WAAW,EAAE,CAAA;IACxC,OAAO,CACL,YAAY,CAAC,MAAM,CAAC,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,WAAW,CAAC;QACxD,CAAC,CAAC,CAAA,UAAU,aAAV,UAAU,uBAAV,UAAU,CAAE,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,WAAW,CAAC,EAAE,MAAM,CAAA,CACxE,CAAA;AACH,CAAC;AAED,SAAS,YAAY,CAAC,MAA6B;IACjD,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE;QACnB,MAAM,IAAI,KAAK,CAAC,aAAa,CAAC,CAAA;KAC/B;IACD,OAAO,CACL,IAAA,8BAAc,EAAC,MAAM,EAAE,MAAM,CAAC;QAC9B,uBACE,IAAA,8BAAc,EAAC,IAAA,2BAAS,EAAC,MAAM,CAAC,EAAE,aAAa,CAAC;YAChD,IAAA,8BAAc,EAAC,IAAA,2BAAS,EAAC,MAAM,CAAC,EAAE,MAAM,CAC1C,GAAG,CACJ,CAAA;AACH,CAAC;AAWD,SAAS,YAAY,CACnB,MAA+B,EAC/B,IAAgC,EAChC,YAAoB;IAEpB,MAAM,EAAE,eAAe,EAAE,GAAG,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAA;IAC5C,MAAM,EAAE,aAAa,EAAE,GAAG,IAAA,wBAAM,EAAC,IAAI,CAAC,CAAA;IACtC,MAAM,QAAQ,GAAG,eAAe,CAAC,GAAG,CAAC,YAAY,CAAC,CAAA;IAElD,IAAI,CAAC,QAAQ,EAAE;QACb,OAAO,EAAE,CAAA;KACV;IACD,MAAM,EAAE,UAAU,EAAE,GAAG,QAAQ,CAAA;IAC/B,OAAO,MAAM;SACV,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,aAAa,CAAC,UAAU,EAAE,IAAA,8BAAc,EAAC,CAAC,EAAE,eAAe,CAAC,CAAC,CAAC;SAC1E,MAAM,CAAC,CAAC,CAAC,EAAE;QACV,MAAM,EAAE,YAAY,EAAE,GAAG,aAAa,CAAC,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QAClE,MAAM,cAAc,GAAG,YAAY,CAAC,GAAG,CAAC,CAAC,CAAmB,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAA;QACxE,MAAM,aAAa,GAAG,CAAC,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAmB,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAA;QACrE,OAAO,aAAa,CAAC,cAAc,EAAE,aAAa,CAAC,CAAA;IACrD,CAAC,CAAC,CAAA;AACN,CAAC;AAED,SAAgB,iBAAiB,CAC/B,KAAqC,EACrC,mBAA4C,EAC5C,SAAwD;IAExD,MAAM,SAAS,GAAG,EAAE,QAAQ,EAAE,EAAgB,EAAc,CAAA;IAC5D,MAAM,EAAE,UAAU,EAAE,IAAI,EAAE,GAAG,KAAK,CAAA;IAElC,mBAAmB;SAChB,MAAM,CAAC,IAAI,CAAC,EAAE,CAAC,YAAY,CAAC,UAAU,EAAE,IAAI,CAAC,CAAC;SAC9C,OAAO,CAAC,IAAI,CAAC,EAAE;QACd,iEAAiE;QACjE,MAAM,UAAU,GAAG,CAAC,GAAG,CAAC,IAAA,8BAAc,EAAC,IAAI,EAAE,UAAU,CAAC,IAAI,EAAE,CAAC,CAAC,CAAA;QAEhE,uEAAuE;QACvE,kEAAkE;QAClE,0BAA0B;QAC1B,IAAI,IAAI,CAAC,OAAO,CAAC,QAAQ,CAAC,cAAc,CAAC,EAAE;YACzC,UAAU,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAA;SACtC;QAED,IAAI,SAAS,GAAG,SAAS,CAAA;QAEzB,wDAAwD;QACxD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,UAAU,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;YAC1C,MAAM,QAAQ,GAAG,UAAU,CAAC,CAAC,CAAC,CAAA;YAC9B,MAAM,GAAG,GAAG,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,QAAQ,CAAC,CAAA;YAC7D,MAAM,EAAE,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAA;YAC/C,IAAI,CAAC,GAAG,EAAE;gBACR,MAAM,CAAC,GAAG;oBACR,QAAQ,EAAE,EAAE;oBACZ,IAAI,EAAE,QAAQ;oBACd,EAAE;oBACF,eAAe,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC,EAAE,CAAC;iBACpC,CAAA;gBACD,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;gBAC1B,SAAS,GAAG,CAAC,CAAA;aACd;iBAAM;gBACL,SAAS,GAAG,GAAG,CAAA;aAChB;SACF;QACD,MAAM,MAAM,GAAG,IAAI,CAAC,MAAoD,CAAA;QAExE,uEAAuE;QACvE,SAAS,CAAC,QAAQ,CAAC,MAAM,CACvB,SAAS,CAAC,QAAQ,CAAC,SAAS,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,QAAQ,CAAC,MAAM,CAAC,EACxD,CAAC,EACD;YACE,EAAE,EAAE,IAAI,CAAC,OAAO;YAChB,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;YACxB,IAAI;YACJ,OAAO,EAAE,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,aAAa,KAAK,IAAI,CAAC;YACrD,QAAQ,EAAE,EAAE;SACb,CACF,CAAA;IACH,CAAC,CAAC,CAAA;IAEJ,OAAO,SAAS,CAAC,QAAQ,CAAA;AAC3B,CAAC;AA1DD,8CA0DC;AAED,SAAwB,gBAAgB,CAAC,aAA4B;IACnE,OAAO,uBAAK;SACT,KAAK,CAAC,iCAAiC,EAAE;QACxC,EAAE,EAAE,eAAS;QACb,IAAI,EAAE,uBAAK,CAAC,OAAO,CAAC,iCAAiC,CAAC;QACtD,SAAS,EAAE,uBAAK,CAAC,GAAG,CAAC,uBAAK,CAAC,OAAO,CAAC;QACnC,UAAU,EAAE,EAAE;QACd,IAAI,EAAE,uBAAK,CAAC,aAAa,CACvB,aAAa,CAAC,gBAAgB,CAAC,MAAM,EAAE,YAAY,CAAC,CACrD;KACF,CAAC;SACD,QAAQ,CAAC,GAAG,EAAE,CAAC,CAAC;QACf,SAAS,EAAE,EAA6B;KACzC,CAAC,CAAC;SACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB,cAAc,CAAC,GAA4B;YACzC,IAAI,CAAC,SAAS,GAAG,CAAC,GAAG,IAAI,CAAC,SAAS,EAAE,GAAG,GAAG,CAAC,CAAA;QAC9C,CAAC;QACD,mBAAmB,CAAC,GAA4B;YAC9C,IAAI,CAAC,SAAS,GAAG,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAA;QAC/D,CAAC;QACD,cAAc;YACZ,IAAI,CAAC,SAAS,GAAG,EAAE,CAAA;QACrB,CAAC;QACD,OAAO,CAAC,IAAa;YACnB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAA;QAClB,CAAC;QACD,cAAc,CAAC,QAAgB;YAC7B,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,QAAQ,EAAE,CAAC,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAA;QAC7D,CAAC;QACD,eAAe;YACb,IAAI,CAAC,UAAU,GAAG,EAAE,CAAA;QACtB,CAAC;QACD,aAAa,CAAC,OAAe;YAC3B,IAAI,CAAC,UAAU,GAAG,OAAO,CAAA;QAC3B,CAAC;KACF,CAAC,CAAC;SACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACd,kBAAkB,CAAC,YAAoB;YACrC,MAAM,EAAE,eAAe,EAAE,GAAG,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAA;YAC5C,MAAM,QAAQ,GAAG,eAAe,CAAC,GAAG,CAAC,YAAY,CAAC,CAAA;YAClD,MAAM,SAAS,GAAG,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,aAAa,CAAC,QAAQ,CAAA;YAClD,MAAM,QAAQ,GAAG,aAAa,CAAC,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;YAC1D,IAAI,CAAC,SAAS,EAAE;gBACd,OAAO,SAAS,CAAA;aA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@@ -1,2 +1,2 @@
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1
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-
export { default as stateModelFactory } from
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2
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-
export const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
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1
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+
export { default as stateModelFactory } from './model';
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+
export declare const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/PluginStoreWidget/index.
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1
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+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/PluginStoreWidget/index.ts"],"names":[],"mappings":";;;;;;AAAA,+DAAiE;AAEjE,iCAAsD;AAA7C,2HAAA,OAAO,OAAqB;AACxB,QAAA,YAAY,GAAG,IAAA,mCAAmB,EAAC,mBAAmB,EAAE,EAAE,CAAC,CAAA"}
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@@ -1,14 +1,26 @@
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1
1
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export default function UCSCTrackHubConnection(pluginManager: any): import("mobx-state-tree").IModelType<{
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2
2
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name: import("mobx-state-tree").ISimpleType<string>;
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3
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-
tracks: import("mobx-state-tree").IArrayType<
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3
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+
tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>;
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4
4
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} & {
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5
5
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configuration: import("mobx-state-tree").ITypeUnion<any, any, any>;
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6
6
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type: import("mobx-state-tree").ISimpleType<"UCSCTrackHubConnection">;
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7
7
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}, {
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8
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afterAttach(): void;
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9
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-
addTrackConf(trackConf:
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10
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-
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11
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-
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9
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+
addTrackConf(trackConf: {
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10
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[x: string]: any;
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11
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+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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12
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+
setSubschema(slotName: string, data: unknown): any;
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13
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+
} & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>): any;
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14
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+
addTrackConfs(trackConfs: ({
|
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15
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+
[x: string]: any;
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16
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+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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17
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+
setSubschema(slotName: string, data: unknown): any;
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18
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+
} & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>)[]): any[];
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19
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+
setTrackConfs(trackConfs: ({
|
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20
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+
[x: string]: any;
|
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21
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
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22
|
+
setSubschema(slotName: string, data: unknown): any;
|
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23
|
+
} & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>)[]): import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IAnyModelType> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>>;
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12
24
|
clear(): void;
|
|
13
25
|
} & {
|
|
14
26
|
connect(): void;
|
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@@ -1,6 +1,6 @@
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1
|
-
export function fetchHubFile(hubFileLocation: any): Promise<
|
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2
|
-
export function fetchGenomesFile(genomesFileLocation: any): Promise<
|
|
3
|
-
export function fetchTrackDbFile(trackDbFileLocation: any): Promise<
|
|
1
|
+
export function fetchHubFile(hubFileLocation: any): Promise<import("@gmod/ucsc-hub").HubFile>;
|
|
2
|
+
export function fetchGenomesFile(genomesFileLocation: any): Promise<import("@gmod/ucsc-hub").GenomesFile>;
|
|
3
|
+
export function fetchTrackDbFile(trackDbFileLocation: any): Promise<import("@gmod/ucsc-hub").TrackDbFile>;
|
|
4
4
|
export function generateTracks(trackDb: any, trackDbFileLocation: any, assemblyName: any, sequenceAdapter: any): any[];
|
|
5
5
|
export { ucscAssemblies };
|
|
6
6
|
import ucscAssemblies from "./ucscAssemblies";
|
|
@@ -1,9 +1,6 @@
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1
|
-
|
|
2
|
-
|
|
1
|
+
/// <reference types="react" />
|
|
2
|
+
declare function AddConnectionWidget({ model }: {
|
|
3
|
+
model: unknown;
|
|
3
4
|
}): JSX.Element;
|
|
4
|
-
declare
|
|
5
|
-
namespace propTypes {
|
|
6
|
-
const model: import("prop-types").Validator<any>;
|
|
7
|
-
}
|
|
8
|
-
}
|
|
5
|
+
declare const _default: typeof AddConnectionWidget;
|
|
9
6
|
export default _default;
|