@jbrowse/plugin-data-management 2.1.0 → 2.1.2

package/dist/AssemblyManager/AssemblyManager.js.map

@@ -1 +1 @@
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+{"version":3,"file":"AssemblyManager.js","sourceRoot":"","sources":["../../src/AssemblyManager/AssemblyManager.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,2CAAqC;AACrC,uCAA0C;AAE1C,4CAOsB;AACtB,oFAA+D;AAC/D,sEAAiD;AACjD,kEAA6C;AAE7C,oEAA2C;AAC3C,wEAA+C;AAC/C,sEAA6C;AAE7C,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,QAAQ,EAAE;QACR,KAAK,EAAE,MAAM;QACb,eAAe,EAAE,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,IAAI;QAC3C,SAAS,EAAE,QAAQ;KACpB;IACD,aAAa,EAAE;QACb,KAAK,EAAE,MAAM;KACd;IACD,UAAU,EAAE;QACV,KAAK,EAAE,MAAM;QACb,QAAQ,EAAE,UAAU;QACpB,IAAI,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACtB,GAAG,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACtB;IACD,WAAW,EAAE;QACX,QAAQ,EAAE,UAAU;QACpB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACvB,GAAG,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACrB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC;KAC/B;CACF,CAAC,CAAC,CAAA;AAEH,MAAM,eAAe,GAAG,IAAA,qBAAQ,EAC9B,CAAC,EACC,SAAS,EACT,OAAO,GAKR,EAAE,EAAE;IACH,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,CAAC,UAAU,EAAE,WAAW,CAAC,GAAG,IAAA,gBAAQ,EAAC,KAAK,CAAC,CAAA;IACjD,MAAM,CAAC,qBAAqB,EAAE,wBAAwB,CAAC,GAAG,IAAA,gBAAQ,EAAC,KAAK,CAAC,CAAA;IACzE,MAAM,CAAC,mBAAmB,EAAE,sBAAsB,CAAC,GACjD,IAAA,gBAAQ,GAAyB,CAAA;IAEnC,MAAM,iBAAiB,GAAG,CAAC,UAAU,IAAI,CAAC,qBAAqB,CAAA;IAE/D,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI,QAAC,OAAO,EAAE,GAAG,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QACxC,8BAAC,sBAAW,IAAC,SAAS,EAAE,OAAO,CAAC,QAAQ;YACrC,iBAAiB,CAAC,CAAC,CAAC,kBAAkB,CAAC,CAAC,CAAC,IAAI;YAC7C,UAAU,CAAC,CAAC,CAAC,CACZ;gBACE,8BAAC,qBAAU,kBACE,MAAM,EACjB,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,CAAC,KAAK,CAAC;oBAEjC,8BAAC,sBAAgB,OAAG,CACT;mCAEZ,CACJ,CAAC,CAAC,CAAC,IAAI;YACP,qBAAqB,CAAC,CAAC,CAAC,CACvB;gBACE,8BAAC,qBAAU,kBACE,MAAM,EACjB,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,OAAO,EAAE,GAAG,EAAE,CAAC,wBAAwB,CAAC,KAAK,CAAC;oBAE9C,8BAAC,sBAAgB,OAAG,CACT;gBACZ,kBAAkB,CAAC,mBAAmB,CAAC,CACvC,CACJ,CAAC,CAAC,CAAC,IAAI;YACR,8BAAC,qBAAU,kBACE,OAAO,EAClB,SAAS,EAAE,OAAO,CAAC,WAAW,EAC9B,OAAO,EAAE,GAAG,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;gBAE7B,8BAAC,eAAS,OAAG,CACF,CACD;QACd,8BAAC,wBAAa;YACZ,uCAAK,SAAS,EAAE,OAAO,CAAC,aAAa;gBAClC,iBAAiB,CAAC,CAAC,CAAC,CACnB,8BAAC,uBAAa,IACZ,SAAS,EAAE,SAAS,EACpB,wBAAwB,EAAE,wBAAwB,EAClD,sBAAsB,EAAE,sBAAsB,GAC9C,CACH,CAAC,CAAC,CAAC,IAAI;gBACP,qBAAqB,CAAC,CAAC,CAAC,CACvB,8BAAC,wBAAc,IAAC,QAAQ,EAAE,mBAAmB,GAAI,CAClD,CAAC,CAAC,CAAC,IAAI;gBACP,UAAU,CAAC,CAAC,CAAC,CACZ,8BAAC,yBAAe,IACd,SAAS,EAAE,SAAS,EACpB,WAAW,EAAE,WAAW,GACxB,CACH,CAAC,CAAC,CAAC,IAAI,CACJ,CACQ;QAChB,8BAAC,wBAAa,QACX,iBAAiB,CAAC,CAAC,CAAC,CACnB;YACE,8BAAC,iBAAM,IACL,KAAK,EAAC,WAAW,EACjB,OAAO,EAAC,WAAW,EACnB,OAAO,EAAE,GAAG,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC,YAGtB;YACT,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,WAAW,EACjB,SAAS,EAAE,8BAAC,aAAO,OAAG,EACtB,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,CAAC,IAAI,CAAC,uBAGzB,CACR,CACJ,CAAC,CAAC,CAAC,IAAI,CACM,CACT,CACV,CAAA;AACH,CAAC,CACF,CAAA;AAED,8DAA8D;AAC9D,SAAS,kBAAkB,CAAC,QAAa;IACvC,IAAI,QAAQ,KAAK,SAAS,EAAE;QAC1B,OAAO,QAAQ,CAAC,IAAI,CAAA;KACrB;IACD,OAAO,IAAI,CAAA;AACb,CAAC;AAED,kBAAe,eAAe,CAAA"}

package/dist/AssemblyManager/AssemblyTable.js

@@ -3,14 +3,14 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importDefault(require("react"));
-var mobx_react_1 = require("mobx-react");
-var material_1 = require("@mui/material");
-var mui_1 = require("tss-react/mui");
-var Create_1 = __importDefault(require("@mui/icons-material/Create"));
-var Delete_1 = __importDefault(require("@mui/icons-material/Delete"));
-var configuration_1 = require("@jbrowse/core/configuration");
-var useStyles = (0, mui_1.makeStyles)()(function () { return ({
+const react_1 = __importDefault(require("react"));
+const mobx_react_1 = require("mobx-react");
+const material_1 = require("@mui/material");
+const mui_1 = require("tss-react/mui");
+const Create_1 = __importDefault(require("@mui/icons-material/Create"));
+const Delete_1 = __importDefault(require("@mui/icons-material/Delete"));
+const configuration_1 = require("@jbrowse/core/configuration");
+const useStyles = (0, mui_1.makeStyles)()(() => ({
     table: {
         minWidth: 500,
         minHeight: 150,
@@ -24,28 +24,27 @@ var useStyles = (0, mui_1.makeStyles)()(function () { return ({
         minHeight: 0,
         minWidth: 0,
     },
-}); });
-var AssemblyTable = (0, mobx_react_1.observer)(function (_a) {
-    var rootModel = _a.rootModel, setIsAssemblyBeingEdited = _a.setIsAssemblyBeingEdited, setAssemblyBeingEdited = _a.setAssemblyBeingEdited;
-    var classes = useStyles().classes;
+}));
+const AssemblyTable = (0, mobx_react_1.observer)(({ rootModel, setIsAssemblyBeingEdited, setAssemblyBeingEdited, }) => {
+    const { classes } = useStyles();
     function removeAssembly(name) {
         rootModel.jbrowse.removeAssemblyConf(name);
     }
-    var rows = rootModel.jbrowse.assemblies.map(function (assembly) {
-        var name = (0, configuration_1.readConfObject)(assembly, 'name');
-        var displayName = (0, configuration_1.readConfObject)(assembly, 'displayName');
-        var aliases = (0, configuration_1.readConfObject)(assembly, 'aliases');
+    const rows = rootModel.jbrowse.assemblies.map(assembly => {
+        const name = (0, configuration_1.readConfObject)(assembly, 'name');
+        const displayName = (0, configuration_1.readConfObject)(assembly, 'displayName');
+        const aliases = (0, configuration_1.readConfObject)(assembly, 'aliases');
         return (react_1.default.createElement(material_1.TableRow, { key: name },
             react_1.default.createElement(material_1.TableCell, null, name),
             react_1.default.createElement(material_1.TableCell, null, displayName),
             react_1.default.createElement(material_1.TableCell, null, aliases ? aliases.toString() : ''),
             react_1.default.createElement(material_1.TableCell, { className: classes.buttonCell },
-                react_1.default.createElement(material_1.IconButton, { "data-testid": "".concat(name, "-edit"), className: classes.button, onClick: function () {
+                react_1.default.createElement(material_1.IconButton, { "data-testid": `${name}-edit`, className: classes.button, onClick: () => {
                         setIsAssemblyBeingEdited(true);
                         setAssemblyBeingEdited(assembly);
                     } },
                     react_1.default.createElement(Create_1.default, { color: "primary" })),
-                react_1.default.createElement(material_1.IconButton, { "data-testid": "".concat(name, "-delete"), className: classes.button, onClick: function () {
+                react_1.default.createElement(material_1.IconButton, { "data-testid": `${name}-delete`, className: classes.button, onClick: () => {
                         removeAssembly(name);
                     } },
                     react_1.default.createElement(Delete_1.default, { color: "error" })))));

package/dist/AssemblyManager/AssemblyTable.js.map

@@ -1 +1 @@
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+{"version":3,"file":"AssemblyTable.js","sourceRoot":"","sources":["../../src/AssemblyManager/AssemblyTable.tsx"],"names":[],"mappings":";;;;;AAAA,kDAAyB;AACzB,2CAAqC;AACrC,4CAUsB;AACtB,uCAA0C;AAE1C,wEAAmD;AACnD,wEAAmD;AACnD,+DAGoC;AAEpC,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,GAAG,EAAE,CAAC,CAAC;IACpC,KAAK,EAAE;QACL,QAAQ,EAAE,GAAG;QACb,SAAS,EAAE,GAAG;KACf;IACD,UAAU,EAAE;QACV,OAAO,EAAE,CAAC;KACX;IACD,MAAM,EAAE;QACN,OAAO,EAAE,cAAc;QACvB,OAAO,EAAE,CAAC;QACV,SAAS,EAAE,CAAC;QACZ,QAAQ,EAAE,CAAC;KACZ;CACF,CAAC,CAAC,CAAA;AAEH,MAAM,aAAa,GAAG,IAAA,qBAAQ,EAC5B,CAAC,EACC,SAAS,EACT,wBAAwB,EACxB,sBAAsB,GAUvB,EAAE,EAAE;IACH,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAE/B,SAAS,cAAc,CAAC,IAAY;QAClC,SAAS,CAAC,OAAO,CAAC,kBAAkB,CAAC,IAAI,CAAC,CAAA;IAC5C,CAAC;IAED,MAAM,IAAI,GAAG,SAAS,CAAC,OAAO,CAAC,UAAU,CAAC,GAAG,CAAC,QAAQ,CAAC,EAAE;QACvD,MAAM,IAAI,GAAG,IAAA,8BAAc,EAAC,QAAQ,EAAE,MAAM,CAAC,CAAA;QAC7C,MAAM,WAAW,GAAG,IAAA,8BAAc,EAAC,QAAQ,EAAE,aAAa,CAAC,CAAA;QAC3D,MAAM,OAAO,GAAG,IAAA,8BAAc,EAAC,QAAQ,EAAE,SAAS,CAAC,CAAA;QACnD,OAAO,CACL,8BAAC,mBAAQ,IAAC,GAAG,EAAE,IAAI;YACjB,8BAAC,oBAAS,QAAE,IAAI,CAAa;YAC7B,8BAAC,oBAAS,QAAE,WAAW,CAAa;YACpC,8BAAC,oBAAS,QAAE,OAAO,CAAC,CAAC,CAAC,OAAO,CAAC,QAAQ,EAAE,CAAC,CAAC,CAAC,EAAE,CAAa;YAC1D,8BAAC,oBAAS,IAAC,SAAS,EAAE,OAAO,CAAC,UAAU;gBACtC,8BAAC,qBAAU,mBACI,GAAG,IAAI,OAAO,EAC3B,SAAS,EAAE,OAAO,CAAC,MAAM,EACzB,OAAO,EAAE,GAAG,EAAE;wBACZ,wBAAwB,CAAC,IAAI,CAAC,CAAA;wBAC9B,sBAAsB,CAAC,QAAQ,CAAC,CAAA;oBAClC,CAAC;oBAED,8BAAC,gBAAU,IAAC,KAAK,EAAC,SAAS,GAAG,CACnB;gBACb,8BAAC,qBAAU,mBACI,GAAG,IAAI,SAAS,EAC7B,SAAS,EAAE,OAAO,CAAC,MAAM,EACzB,OAAO,EAAE,GAAG,EAAE;wBACZ,cAAc,CAAC,IAAI,CAAC,CAAA;oBACtB,CAAC;oBAED,8BAAC,gBAAU,IAAC,KAAK,EAAC,OAAO,GAAG,CACjB,CACH,CACH,CACZ,CAAA;IACH,CAAC,CAAC,CAAA;IAEF,OAAO,CACL,8BAAC,yBAAc,IAAC,SAAS,EAAE,gBAAK;QAC9B,8BAAC,gBAAK,IAAC,SAAS,EAAE,OAAO,CAAC,KAAK;YAC7B,8BAAC,oBAAS;gBACR,8BAAC,mBAAQ;oBACP,8BAAC,oBAAS;wBACR,8BAAC,qBAAU,IAAC,OAAO,EAAC,IAAI,WAAkB,CAChC;oBACZ,8BAAC,oBAAS;wBACR,8BAAC,qBAAU,IAAC,OAAO,EAAC,IAAI,mBAA0B,CACxC;oBACZ,8BAAC,oBAAS;wBACR,8BAAC,qBAAU,IAAC,OAAO,EAAC,IAAI,cAAqB,CACnC;oBACZ,8BAAC,oBAAS;wBACR,8BAAC,qBAAU,IAAC,OAAO,EAAC,IAAI,cAAqB,CACnC,CACH,CACD;YACZ,8BAAC,oBAAS,QAAE,IAAI,CAAa,CACvB,CACO,CAClB,CAAA;AACH,CAAC,CACF,CAAA;AAED,kBAAe,aAAa,CAAA"}

package/dist/HierarchicalTrackSelectorWidget/components/CloseConnectionDialog.js

@@ -1,30 +1,13 @@
 "use strict";
-var __read = (this && this.__read) || function (o, n) {
-    var m = typeof Symbol === "function" && o[Symbol.iterator];
-    if (!m) return o;
-    var i = m.call(o), r, ar = [], e;
-    try {
-        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
-    }
-    catch (error) { e = { error: error }; }
-    finally {
-        try {
-            if (r && !r.done && (m = i["return"])) m.call(i);
-        }
-        finally { if (e) throw e.error; }
-    }
-    return ar;
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importDefault(require("react"));
-var material_1 = require("@mui/material");
-var mobx_react_1 = require("mobx-react");
-function CloseConnectionDialog(_a) {
-    var _b = _a.modalInfo, modalInfo = _b === void 0 ? {} : _b, setModalInfo = _a.setModalInfo;
-    var name = modalInfo.name, dereferenceTypeCount = modalInfo.dereferenceTypeCount, safelyBreakConnection = modalInfo.safelyBreakConnection;
+const react_1 = __importDefault(require("react"));
+const material_1 = require("@mui/material");
+const mobx_react_1 = require("mobx-react");
+function CloseConnectionDialog({ modalInfo = {}, setModalInfo, }) {
+    const { name, dereferenceTypeCount, safelyBreakConnection } = modalInfo;
     return (react_1.default.createElement(material_1.Dialog, { open: true },
         react_1.default.createElement(material_1.DialogTitle, null,
             "Close connection \"",
@@ -33,19 +16,16 @@ function CloseConnectionDialog(_a) {
         react_1.default.createElement(material_1.DialogContent, null,
             dereferenceTypeCount ? (react_1.default.createElement(react_1.default.Fragment, null,
                 react_1.default.createElement(material_1.DialogContentText, null, "Closing this connection will close:"),
-                react_1.default.createElement(material_1.List, null, Object.entries(dereferenceTypeCount).map(function (_a) {
-                    var _b = __read(_a, 2), key = _b[0], value = _b[1];
-                    return (react_1.default.createElement(material_1.ListItem, { key: key }, "".concat(value, " ").concat(key)));
-                })))) : null,
+                react_1.default.createElement(material_1.List, null, Object.entries(dereferenceTypeCount).map(([key, value]) => (react_1.default.createElement(material_1.ListItem, { key: key }, `${value} ${key}`)))))) : null,
             react_1.default.createElement(material_1.DialogContentText, null, "Are you sure you want to close this connection?")),
         react_1.default.createElement(material_1.DialogActions, null,
-            react_1.default.createElement(material_1.Button, { onClick: function () { return setModalInfo(); }, color: "primary" }, "Cancel"),
+            react_1.default.createElement(material_1.Button, { onClick: () => setModalInfo(), color: "primary" }, "Cancel"),
             react_1.default.createElement(material_1.Button, { variant: "contained", onClick: modalInfo
-                    ? function () {
+                    ? () => {
                         safelyBreakConnection === null || safelyBreakConnection === void 0 ? void 0 : safelyBreakConnection();
                         setModalInfo();
                     }
-                    : function () { }, color: "primary" }, "OK"))));
+                    : () => { }, color: "primary" }, "OK"))));
 }
 exports.default = (0, mobx_react_1.observer)(CloseConnectionDialog);
 //# sourceMappingURL=CloseConnectionDialog.js.map

package/dist/HierarchicalTrackSelectorWidget/components/CloseConnectionDialog.js.map

@@ -1 +1 @@
-{"version":3,"file":"CloseConnectionDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/CloseConnectionDialog.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;AAAA,gDAAyB;AACzB,0CASsB;AACtB,yCAAqC;AAErC,SAAS,qBAAqB,CAAC,EAU9B;QATC,iBAAc,EAAd,SAAS,mBAAG,EAAE,KAAA,EACd,YAAY,kBAAA;IASJ,IAAA,IAAI,GAAkD,SAAS,KAA3D,EAAE,oBAAoB,GAA4B,SAAS,qBAArC,EAAE,qBAAqB,GAAK,SAAS,sBAAd,CAAc;IACvE,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI;QACV,8BAAC,sBAAW;;YAAyB,IAAI;iBAAqB;QAC9D,8BAAC,wBAAa;YACX,oBAAoB,CAAC,CAAC,CAAC,CACtB;gBACE,8BAAC,4BAAiB,8CAEE;gBACpB,8BAAC,eAAI,QACF,MAAM,CAAC,OAAO,CAAC,oBAAoB,CAAC,CAAC,GAAG,CAAC,UAAC,EAAY;wBAAZ,KAAA,aAAY,EAAX,GAAG,QAAA,EAAE,KAAK,QAAA;oBAAM,OAAA,CAC1D,8BAAC,mBAAQ,IAAC,GAAG,EAAE,GAAG,IAAG,UAAG,KAAK,cAAI,GAAG,CAAE,CAAY,CACnD;gBAF2D,CAE3D,CAAC,CACG,CACN,CACJ,CAAC,CAAC,CAAC,IAAI;YACR,8BAAC,4BAAiB,0DAEE,CACN;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IAAC,OAAO,EAAE,cAAM,OAAA,YAAY,EAAE,EAAd,CAAc,EAAE,KAAK,EAAC,SAAS,aAE7C;YACT,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,OAAO,EACL,SAAS;oBACP,CAAC,CAAC;wBACE,qBAAqB,aAArB,qBAAqB,uBAArB,qBAAqB,EAAI,CAAA;wBACzB,YAAY,EAAE,CAAA;oBAChB,CAAC;oBACH,CAAC,CAAC,cAAO,CAAC,EAEd,KAAK,EAAC,SAAS,SAGR,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,qBAAqB,CAAC,CAAA"}
+{"version":3,"file":"CloseConnectionDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/CloseConnectionDialog.tsx"],"names":[],"mappings":";;;;;AAAA,kDAAyB;AACzB,4CASsB;AACtB,2CAAqC;AAErC,SAAS,qBAAqB,CAAC,EAC7B,SAAS,GAAG,EAAE,EACd,YAAY,GAQb;IACC,MAAM,EAAE,IAAI,EAAE,oBAAoB,EAAE,qBAAqB,EAAE,GAAG,SAAS,CAAA;IACvE,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI;QACV,8BAAC,sBAAW;;YAAyB,IAAI;iBAAqB;QAC9D,8BAAC,wBAAa;YACX,oBAAoB,CAAC,CAAC,CAAC,CACtB;gBACE,8BAAC,4BAAiB,8CAEE;gBACpB,8BAAC,eAAI,QACF,MAAM,CAAC,OAAO,CAAC,oBAAoB,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,GAAG,EAAE,KAAK,CAAC,EAAE,EAAE,CAAC,CAC1D,8BAAC,mBAAQ,IAAC,GAAG,EAAE,GAAG,IAAG,GAAG,KAAK,IAAI,GAAG,EAAE,CAAY,CACnD,CAAC,CACG,CACN,CACJ,CAAC,CAAC,CAAC,IAAI;YACR,8BAAC,4BAAiB,0DAEE,CACN;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IAAC,OAAO,EAAE,GAAG,EAAE,CAAC,YAAY,EAAE,EAAE,KAAK,EAAC,SAAS,aAE7C;YACT,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,OAAO,EACL,SAAS;oBACP,CAAC,CAAC,GAAG,EAAE;wBACH,qBAAqB,aAArB,qBAAqB,uBAArB,qBAAqB,EAAI,CAAA;wBACzB,YAAY,EAAE,CAAA;oBAChB,CAAC;oBACH,CAAC,CAAC,GAAG,EAAE,GAAE,CAAC,EAEd,KAAK,EAAC,SAAS,SAGR,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,qBAAqB,CAAC,CAAA"}

package/dist/HierarchicalTrackSelectorWidget/components/DeleteConnectionDialog.js

@@ -3,12 +3,11 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importDefault(require("react"));
-var material_1 = require("@mui/material");
-var mobx_react_1 = require("mobx-react");
-function DeleteConnectionDialog(_a) {
-    var deleteDialogDetails = _a.deleteDialogDetails, session = _a.session, handleClose = _a.handleClose;
-    var connectionConf = deleteDialogDetails.connectionConf, name = deleteDialogDetails.name;
+const react_1 = __importDefault(require("react"));
+const material_1 = require("@mui/material");
+const mobx_react_1 = require("mobx-react");
+function DeleteConnectionDialog({ deleteDialogDetails, session, handleClose, }) {
+    const { connectionConf, name } = deleteDialogDetails;
     return (react_1.default.createElement(material_1.Dialog, { open: true },
         react_1.default.createElement(material_1.DialogTitle, null,
             "Delete connection \"",
@@ -17,8 +16,8 @@ function DeleteConnectionDialog(_a) {
         react_1.default.createElement(material_1.DialogContent, null,
             react_1.default.createElement(material_1.DialogContentText, null, "Are you sure you want to delete this connection?")),
         react_1.default.createElement(material_1.DialogActions, null,
-            react_1.default.createElement(material_1.Button, { onClick: function () { return handleClose(); }, color: "primary" }, "Cancel"),
-            react_1.default.createElement(material_1.Button, { variant: "contained", color: "primary", onClick: function () {
+            react_1.default.createElement(material_1.Button, { onClick: () => handleClose(), color: "primary" }, "Cancel"),
+            react_1.default.createElement(material_1.Button, { variant: "contained", color: "primary", onClick: () => {
                     var _a;
                     if (connectionConf) {
                         (_a = session.deleteConnection) === null || _a === void 0 ? void 0 : _a.call(session, connectionConf);

package/dist/HierarchicalTrackSelectorWidget/components/DeleteConnectionDialog.js.map

@@ -1 +1 @@
-{"version":3,"file":"DeleteConnectionDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/DeleteConnectionDialog.tsx"],"names":[],"mappings":";;;;;AAAA,gDAAyB;AACzB,0CAOsB;AACtB,yCAAqC;AAIrC,SAAS,sBAAsB,CAAC,EAQ/B;QAPC,mBAAmB,yBAAA,EACnB,OAAO,aAAA,EACP,WAAW,iBAAA;IAMH,IAAA,cAAc,GAAW,mBAAmB,eAA9B,EAAE,IAAI,GAAK,mBAAmB,KAAxB,CAAwB;IACpD,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI;QACV,8BAAC,sBAAW;;YAA0B,IAAI;iBAAqB;QAC/D,8BAAC,wBAAa;YACZ,8BAAC,4BAAiB,2DAEE,CACN;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IAAC,OAAO,EAAE,cAAM,OAAA,WAAW,EAAE,EAAb,CAAa,EAAE,KAAK,EAAC,SAAS,aAE5C;YACT,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE;;oBACP,IAAI,cAAc,EAAE;wBAClB,MAAA,OAAO,CAAC,gBAAgB,wDAAG,cAAc,CAAC,CAAA;qBAC3C;oBACD,WAAW,EAAE,CAAA;gBACf,CAAC,SAGM,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,sBAAsB,CAAC,CAAA"}
+{"version":3,"file":"DeleteConnectionDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/DeleteConnectionDialog.tsx"],"names":[],"mappings":";;;;;AAAA,kDAAyB;AACzB,4CAOsB;AACtB,2CAAqC;AAIrC,SAAS,sBAAsB,CAAC,EAC9B,mBAAmB,EACnB,OAAO,EACP,WAAW,GAKZ;IACC,MAAM,EAAE,cAAc,EAAE,IAAI,EAAE,GAAG,mBAAmB,CAAA;IACpD,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI;QACV,8BAAC,sBAAW;;YAA0B,IAAI;iBAAqB;QAC/D,8BAAC,wBAAa;YACZ,8BAAC,4BAAiB,2DAEE,CACN;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IAAC,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,EAAE,KAAK,EAAC,SAAS,aAE5C;YACT,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,GAAG,EAAE;;oBACZ,IAAI,cAAc,EAAE;wBAClB,MAAA,OAAO,CAAC,gBAAgB,wDAAG,cAAc,CAAC,CAAA;qBAC3C;oBACD,WAAW,EAAE,CAAA;gBACf,CAAC,SAGM,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,sBAAsB,CAAC,CAAA"}

package/dist/HierarchicalTrackSelectorWidget/components/Header.js

@@ -1,15 +1,4 @@
 "use strict";
-var __assign = (this && this.__assign) || function () {
-    __assign = Object.assign || function(t) {
-        for (var s, i = 1, n = arguments.length; i < n; i++) {
-            s = arguments[i];
-            for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p))
-                t[p] = s[p];
-        }
-        return t;
-    };
-    return __assign.apply(this, arguments);
-};
 var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
     if (k2 === undefined) k2 = k;
     var desc = Object.getOwnPropertyDescriptor(m, k);
@@ -33,55 +22,30 @@ var __importStar = (this && this.__importStar) || function (mod) {
     __setModuleDefault(result, mod);
     return result;
 };
-var __read = (this && this.__read) || function (o, n) {
-    var m = typeof Symbol === "function" && o[Symbol.iterator];
-    if (!m) return o;
-    var i = m.call(o), r, ar = [], e;
-    try {
-        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
-    }
-    catch (error) { e = { error: error }; }
-    finally {
-        try {
-            if (r && !r.done && (m = i["return"])) m.call(i);
-        }
-        finally { if (e) throw e.error; }
-    }
-    return ar;
-};
-var __spreadArray = (this && this.__spreadArray) || function (to, from, pack) {
-    if (pack || arguments.length === 2) for (var i = 0, l = from.length, ar; i < l; i++) {
-        if (ar || !(i in from)) {
-            if (!ar) ar = Array.prototype.slice.call(from, 0, i);
-            ar[i] = from[i];
-        }
-    }
-    return to.concat(ar || Array.prototype.slice.call(from));
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importStar(require("react"));
-var mui_1 = require("tss-react/mui");
-var material_1 = require("@mui/material");
+const react_1 = __importStar(require("react"));
+const mui_1 = require("tss-react/mui");
+const material_1 = require("@mui/material");
 // icons
-var Clear_1 = __importDefault(require("@mui/icons-material/Clear"));
-var Menu_1 = __importDefault(require("@mui/icons-material/Menu"));
-var ShoppingCart_1 = __importDefault(require("@mui/icons-material/ShoppingCart"));
-var Icons_1 = require("@jbrowse/core/ui/Icons");
+const Clear_1 = __importDefault(require("@mui/icons-material/Clear"));
+const Menu_1 = __importDefault(require("@mui/icons-material/Menu"));
+const ShoppingCart_1 = __importDefault(require("@mui/icons-material/ShoppingCart"));
+const Icons_1 = require("@jbrowse/core/ui/Icons");
 // other
-var Menu_2 = __importDefault(require("@jbrowse/core/ui/Menu"));
-var util_1 = require("@jbrowse/core/util");
-var configuration_1 = require("@jbrowse/core/configuration");
-var mobx_react_1 = require("mobx-react");
-var mobx_state_tree_1 = require("mobx-state-tree");
+const Menu_2 = __importDefault(require("@jbrowse/core/ui/Menu"));
+const util_1 = require("@jbrowse/core/util");
+const configuration_1 = require("@jbrowse/core/configuration");
+const mobx_react_1 = require("mobx-react");
+const mobx_state_tree_1 = require("mobx-state-tree");
 // lazy components
-var CloseConnectionDialog = (0, react_1.lazy)(function () { return Promise.resolve().then(function () { return __importStar(require('./CloseConnectionDialog')); }); });
-var DeleteConnectionDialog = (0, react_1.lazy)(function () { return Promise.resolve().then(function () { return __importStar(require('./DeleteConnectionDialog')); }); });
-var ManageConnectionsDialog = (0, react_1.lazy)(function () { return Promise.resolve().then(function () { return __importStar(require('./ManageConnectionsDialog')); }); });
-var ToggleConnectionsDialog = (0, react_1.lazy)(function () { return Promise.resolve().then(function () { return __importStar(require('./ToggleConnectionsDialog')); }); });
-var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
+const CloseConnectionDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./CloseConnectionDialog'))));
+const DeleteConnectionDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./DeleteConnectionDialog'))));
+const ManageConnectionsDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./ManageConnectionsDialog'))));
+const ToggleConnectionsDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./ToggleConnectionsDialog'))));
+const useStyles = (0, mui_1.makeStyles)()(theme => ({
     searchBox: {
         margin: theme.spacing(2),
     },
@@ -89,32 +53,31 @@ var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
         marginRight: theme.spacing(1),
         marginBottom: 0,
     },
-}); });
-function HierarchicalTrackSelectorHeader(_a) {
-    var model = _a.model, setHeaderHeight = _a.setHeaderHeight, setAssemblyIdx = _a.setAssemblyIdx, assemblyIdx = _a.assemblyIdx;
-    var classes = useStyles().classes;
-    var session = (0, util_1.getSession)(model);
-    var _b = __read((0, react_1.useState)(), 2), connectionEl = _b[0], setConnectionEl = _b[1];
-    var _c = __read((0, react_1.useState)(), 2), selectionEl = _c[0], setSelectionEl = _c[1];
-    var _d = __read((0, react_1.useState)(), 2), menuEl = _d[0], setMenuEl = _d[1];
-    var _e = __read((0, react_1.useState)(), 2), modalInfo = _e[0], setModalInfo = _e[1];
-    var _f = __read((0, react_1.useState)(), 2), deleteDlgDetails = _f[0], setDeleteDlgDetails = _f[1];
-    var _g = __read((0, react_1.useState)(false), 2), connectionManagerOpen = _g[0], setConnectionManagerOpen = _g[1];
-    var _h = __read((0, react_1.useState)(false), 2), connectionToggleOpen = _h[0], setConnectionToggleOpen = _h[1];
-    var assemblyNames = model.assemblyNames;
-    var assemblyName = assemblyNames[assemblyIdx];
+}));
+function HierarchicalTrackSelectorHeader({ model, setHeaderHeight, setAssemblyIdx, assemblyIdx, }) {
+    const { classes } = useStyles();
+    const session = (0, util_1.getSession)(model);
+    const [connectionEl, setConnectionEl] = (0, react_1.useState)();
+    const [selectionEl, setSelectionEl] = (0, react_1.useState)();
+    const [menuEl, setMenuEl] = (0, react_1.useState)();
+    const [modalInfo, setModalInfo] = (0, react_1.useState)();
+    const [deleteDlgDetails, setDeleteDlgDetails] = (0, react_1.useState)();
+    const [connectionManagerOpen, setConnectionManagerOpen] = (0, react_1.useState)(false);
+    const [connectionToggleOpen, setConnectionToggleOpen] = (0, react_1.useState)(false);
+    const { assemblyNames } = model;
+    const assemblyName = assemblyNames[assemblyIdx];
     function breakConnection(connectionConf, deletingConnection) {
-        var name = (0, configuration_1.readConfObject)(connectionConf, 'name');
+        const name = (0, configuration_1.readConfObject)(connectionConf, 'name');
         // @ts-ignore
-        var result = session.prepareToBreakConnection(connectionConf);
+        const result = session.prepareToBreakConnection(connectionConf);
         if (result) {
-            var _a = __read(result, 2), safelyBreakConnection = _a[0], dereferenceTypeCount = _a[1];
+            const [safelyBreakConnection, dereferenceTypeCount] = result;
             if (Object.keys(dereferenceTypeCount).length > 0) {
                 setModalInfo({
-                    connectionConf: connectionConf,
-                    safelyBreakConnection: safelyBreakConnection,
-                    dereferenceTypeCount: dereferenceTypeCount,
-                    name: name,
+                    connectionConf,
+                    safelyBreakConnection,
+                    dereferenceTypeCount,
+                    name,
                 });
             }
             else {
@@ -122,19 +85,19 @@ function HierarchicalTrackSelectorHeader(_a) {
             }
         }
         if (deletingConnection) {
-            setDeleteDlgDetails({ name: name, connectionConf: connectionConf });
+            setDeleteDlgDetails({ name, connectionConf });
         }
     }
-    var connectionMenuItems = [
+    const connectionMenuItems = [
         {
             label: 'Turn on/off connections...',
-            onClick: function () { return setConnectionToggleOpen(true); },
+            onClick: () => setConnectionToggleOpen(true),
         },
     ];
     if ((0, util_1.isSessionModelWithConnections)(session)) {
         connectionMenuItems.unshift({
             label: 'Add connection',
-            onClick: function () {
+            onClick: () => {
                 if ((0, util_1.isSessionModelWithWidgets)(session)) {
                     session.showWidget(session.addWidget('AddConnectionWidget', 'addConnectionWidget'));
                 }
@@ -142,68 +105,73 @@ function HierarchicalTrackSelectorHeader(_a) {
         });
         connectionMenuItems.push({
             label: 'Delete connections...',
-            onClick: function () { return setConnectionManagerOpen(true); },
+            onClick: () => setConnectionManagerOpen(true),
         });
     }
-    var assemblyMenuItems = assemblyNames.length > 1
+    const assemblyMenuItems = assemblyNames.length > 1
         ? [
             {
                 label: 'Select assembly...',
-                subMenu: assemblyNames.map(function (name, idx) { return ({
+                subMenu: assemblyNames.map((name, idx) => ({
                     label: name,
-                    onClick: function () { return setAssemblyIdx(idx); },
-                }); }),
+                    onClick: () => setAssemblyIdx(idx),
+                })),
             },
         ]
         : [];
-    var menuItems = __spreadArray([
+    const menuItems = [
         {
             label: 'Add track...',
-            onClick: function () {
+            onClick: () => {
                 if ((0, util_1.isSessionModelWithWidgets)(session)) {
                     session.showWidget(session.addWidget('AddTrackWidget', 'addTrackWidget', {
                         view: model.view.id,
                     }));
                 }
             },
-        }
-    ], __read(assemblyMenuItems), false);
-    var items = (0, mobx_state_tree_1.getEnv)(model).pluginManager.evaluateExtensionPoint('TrackSelector-multiTrackMenuItems');
-    return (react_1.default.createElement("div", { ref: function (ref) { return setHeaderHeight((ref === null || ref === void 0 ? void 0 : ref.getBoundingClientRect().height) || 0); }, "data-testid": "hierarchical_track_selector" },
+        },
+        ...assemblyMenuItems,
+    ];
+    const items = (0, mobx_state_tree_1.getEnv)(model).pluginManager.evaluateExtensionPoint('TrackSelector-multiTrackMenuItems');
+    return (react_1.default.createElement("div", { ref: ref => setHeaderHeight((ref === null || ref === void 0 ? void 0 : ref.getBoundingClientRect().height) || 0), "data-testid": "hierarchical_track_selector" },
         react_1.default.createElement("div", { style: { display: 'flex' } },
-            (0, util_1.isSessionWithAddTracks)(session) && (react_1.default.createElement(material_1.IconButton, { className: classes.menuIcon, onClick: function (event) { return setMenuEl(event.currentTarget); } },
+            (0, util_1.isSessionWithAddTracks)(session) && (react_1.default.createElement(material_1.IconButton, { className: classes.menuIcon, onClick: event => setMenuEl(event.currentTarget) },
                 react_1.default.createElement(Menu_1.default, null))),
-            session.makeConnection && (react_1.default.createElement(material_1.IconButton, { className: classes.menuIcon, onClick: function (event) { return setConnectionEl(event.currentTarget); } },
+            session.makeConnection && (react_1.default.createElement(material_1.IconButton, { className: classes.menuIcon, onClick: event => setConnectionEl(event.currentTarget) },
                 react_1.default.createElement(Icons_1.Cable, null))),
-            model.selection.length ? (react_1.default.createElement(material_1.IconButton, { className: classes.menuIcon, onClick: function (event) { return setSelectionEl(event.currentTarget); } },
+            model.selection.length ? (react_1.default.createElement(material_1.IconButton, { className: classes.menuIcon, onClick: event => setSelectionEl(event.currentTarget) },
                 react_1.default.createElement(material_1.Badge, { badgeContent: model.selection.length, color: "primary" },
                     react_1.default.createElement(ShoppingCart_1.default, null)))) : null,
-            react_1.default.createElement(material_1.TextField, { className: classes.searchBox, label: "Filter tracks", value: model.filterText, onChange: function (event) { return model.setFilterText(event.target.value); }, fullWidth: true, InputProps: {
+            react_1.default.createElement(material_1.TextField, { className: classes.searchBox, label: "Filter tracks", value: model.filterText, onChange: event => model.setFilterText(event.target.value), fullWidth: true, InputProps: {
                     endAdornment: (react_1.default.createElement(material_1.InputAdornment, { position: "end" },
                         react_1.default.createElement(material_1.IconButton, { color: "secondary", onClick: model.clearFilterText },
                             react_1.default.createElement(Clear_1.default, null)))),
                 } })),
-        react_1.default.createElement(Menu_2.default, { anchorEl: connectionEl, open: Boolean(connectionEl), onMenuItemClick: function (_, callback) {
+        react_1.default.createElement(Menu_2.default, { anchorEl: connectionEl, open: Boolean(connectionEl), onMenuItemClick: (_, callback) => {
                 callback();
                 setConnectionEl(undefined);
-            }, onClose: function () { return setConnectionEl(undefined); }, menuItems: connectionMenuItems }),
-        react_1.default.createElement(Menu_2.default, { anchorEl: menuEl, open: Boolean(menuEl), onMenuItemClick: function (_, callback) {
+            }, onClose: () => setConnectionEl(undefined), menuItems: connectionMenuItems }),
+        react_1.default.createElement(Menu_2.default, { anchorEl: menuEl, open: Boolean(menuEl), onMenuItemClick: (_, callback) => {
                 callback();
                 setMenuEl(undefined);
-            }, onClose: function () { return setMenuEl(undefined); }, menuItems: menuItems }),
-        react_1.default.createElement(Menu_2.default, { anchorEl: selectionEl, open: Boolean(selectionEl), onMenuItemClick: function (_, callback) {
+            }, onClose: () => setMenuEl(undefined), menuItems: menuItems }),
+        react_1.default.createElement(Menu_2.default, { anchorEl: selectionEl, open: Boolean(selectionEl), onMenuItemClick: (_, callback) => {
                 callback();
                 setSelectionEl(undefined);
-            }, onClose: function () { return setSelectionEl(undefined); }, menuItems: __spreadArray([
-                { label: 'Clear', onClick: function () { return model.clearSelection(); } }
-            ], __read(items.map(function (item) { return (__assign(__assign({}, item), ('onClick' in item
-                ? { onClick: function () { return item.onClick(model); } }
-                : {}))); })), false) }),
+            }, onClose: () => setSelectionEl(undefined), menuItems: [
+                { label: 'Clear', onClick: () => model.clearSelection() },
+                ...items.map(item => ({
+                    ...item,
+                    ...('onClick' in item
+                        ? { onClick: () => item.onClick(model) }
+                        : {}),
+                })),
+            ] }),
         react_1.default.createElement(react_1.Suspense, { fallback: react_1.default.createElement("div", null) },
             modalInfo ? (react_1.default.createElement(CloseConnectionDialog, { modalInfo: modalInfo, setModalInfo: setModalInfo })) : null,
-            deleteDlgDetails ? (react_1.default.createElement(DeleteConnectionDialog, { handleClose: function () { return setDeleteDlgDetails(undefined); }, deleteDialogDetails: deleteDlgDetails, session: session })) : null,
-            connectionManagerOpen ? (react_1.default.createElement(ManageConnectionsDialog, { handleClose: function () { return setConnectionManagerOpen(false); }, breakConnection: breakConnection, session: session })) : null,
-            connectionToggleOpen ? (react_1.default.createElement(ToggleConnectionsDialog, { handleClose: function () { return setConnectionToggleOpen(false); }, session: session, breakConnection: breakConnection, assemblyName: assemblyName })) : null)));
+            deleteDlgDetails ? (react_1.default.createElement(DeleteConnectionDialog, { handleClose: () => setDeleteDlgDetails(undefined), deleteDialogDetails: deleteDlgDetails, session: session })) : null,
+            connectionManagerOpen ? (react_1.default.createElement(ManageConnectionsDialog, { handleClose: () => setConnectionManagerOpen(false), breakConnection: breakConnection, session: session })) : null,
+            connectionToggleOpen ? (react_1.default.createElement(ToggleConnectionsDialog, { handleClose: () => setConnectionToggleOpen(false), session: session, breakConnection: breakConnection, assemblyName: assemblyName })) : null)));
 }
 exports.default = (0, mobx_react_1.observer)(HierarchicalTrackSelectorHeader);
 //# sourceMappingURL=Header.js.map

package/dist/HierarchicalTrackSelectorWidget/components/Header.js.map

@@ -1 +1 @@
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