@jbrowse/plugin-data-management 2.1.0 → 2.1.2

package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.js.map

@@ -1 +1 @@
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+{"version":3,"file":"DefaultAddTrackWorkflow.js","sourceRoot":"","sources":["../../../src/AddTrackWidget/components/DefaultAddTrackWorkflow.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,4CAQsB;AACtB,uCAA0C;AAE1C,6CAI2B;AAC3B,+DAAqD;AACrD,2CAAqC;AACrC,qDAAwC;AAExC,SAAS;AACT,kEAAyC;AACzC,4EAAmD;AAInD,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,IAAI,EAAE;QACJ,SAAS,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC5B;IACD,OAAO,EAAE;QACP,eAAe,EAAE,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,OAAO;KAClD;IACD,MAAM,EAAE;QACN,SAAS,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAC3B,WAAW,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC9B;IACD,gBAAgB,EAAE;QAChB,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC/B;IACD,WAAW,EAAE;QACX,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;IACD,cAAc,EAAE;QACd,OAAO,EAAE,GAAG,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,UAAU,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,QAAQ;KAC/D;CACF,CAAC,CAAC,CAAA;AAEH,MAAM,KAAK,GAAG,CAAC,kBAAkB,EAAE,oBAAoB,CAAC,CAAA;AAExD,SAAS,gBAAgB,CAAC,EAAE,KAAK,EAA4B;IAC3D,MAAM,CAAC,UAAU,EAAE,aAAa,CAAC,GAAG,IAAA,gBAAQ,EAAC,CAAC,CAAC,CAAA;IAC/C,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EAAE,aAAa,EAAE,GAAG,IAAA,wBAAM,EAAC,KAAK,CAAC,CAAA;IACvC,MAAM,EAAE,SAAS,EAAE,GAAG,aAAa,CAAA;IACnC,MAAM,EAAE,WAAW,EAAE,GAAG,SAAS,CAAA;IACjC,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;IACjC,MAAM,EACJ,QAAQ,EACR,YAAY,EACZ,SAAS,EACT,SAAS,EACT,SAAS,EACT,cAAc,EACd,gBAAgB,GACjB,GAAG,KAAK,CAAA;IACT,MAAM,CAAC,iBAAiB,EAAE,oBAAoB,CAAC,GAAG,IAAA,gBAAQ,GAAU,CAAA;IAEpE,SAAS,cAAc,CAAC,IAAY;QAClC,QAAQ,IAAI,EAAE;YACZ,KAAK,CAAC;gBACJ,OAAO,8BAAC,2BAAiB,IAAC,KAAK,EAAE,KAAK,GAAI,CAAA;YAC5C,KAAK,CAAC;gBACJ,OAAO,8BAAC,sBAAY,IAAC,KAAK,EAAE,KAAK,GAAI,CAAA;YACvC;gBACE,OAAO,8BAAC,qBAAU,uBAA0B,CAAA;SAC/C;IACH,CAAC;IAED,KAAK,UAAU,UAAU;QACvB,IAAI,UAAU,KAAK,KAAK,CAAC,MAAM,GAAG,CAAC,EAAE;YACnC,aAAa,CAAC,UAAU,GAAG,CAAC,CAAC,CAAA;YAC7B,OAAM;SACP;QAED,MAAM,OAAO,GAAG;YACd,GAAG,SAAS,CAAC,WAAW,EAAE,CAAC,OAAO,CAAC,IAAI,EAAE,GAAG,CAAC,IAAI,IAAI,CAAC,GAAG,EAAE,EAAE;YAC7D,GAAG,OAAO,CAAC,SAAS,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,eAAe,EAAE;SAC9C,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;QAEV,MAAM,gBAAgB,GAAG,OAAO,CAAC,eAAe,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAA;QAE9D,IAAI,YAAY,IAAI,YAAY,CAAC,IAAI,KAAK,SAAS,EAAE;YACnD,OAAO,CAAC,YAAY,CAAC;gBACnB,OAAO;gBACP,IAAI,EAAE,SAAS;gBACf,IAAI,EAAE,SAAS;gBACf,aAAa,EAAE,CAAC,QAAQ,CAAC;gBACzB,OAAO,EAAE;oBACP,GAAG,YAAY;oBACf,eAAe,EAAE,IAAA,uBAAO,EAAC,gBAAgB,EAAE,CAAC,UAAU,EAAE,SAAS,CAAC,CAAC;iBACpE;aACF,CAAC,CAAA;YACF,IAAI,KAAK,CAAC,IAAI,EAAE;gBACd,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,CAAA;gBAC7B,IACE,iBAAU;oBACV,cAAc;oBACd,IAAA,gCAAyB,EAAC,YAAY,CAAC,IAAI,CAAC,EAC5C;oBACA,MAAM,IAAI,GAAG,gBAAgB,IAAI;wBAC/B,UAAU,EAAE,CAAC,MAAM,EAAE,IAAI,CAAC;wBAC1B,OAAO,EAAE,CAAC,KAAK,EAAE,MAAM,CAAC;qBACzB,CAAA;oBACD,MAAM,SAAS,GAAG,SAAS,GAAG,QAAQ,CAAA;oBACtC,MAAM,QAAQ,GAAG;wBACf,cAAc,EAAE;4BACd,GAAG,IAAI;4BACP,UAAU,EAAE,CAAC,QAAQ,CAAC;4BACtB,MAAM,EAAE,CAAC,OAAO,CAAC;4BACjB,SAAS,EAAE,UAAU;4BACrB,IAAI,EAAE,SAAS;4BACf,SAAS,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;yBACpC;wBACD,IAAI,EAAE,SAAS;wBACf,cAAc,EAAE,GAAG,EAAE,CAAC,WAAW,CAAC,QAAQ,EAAE;qBAC7C,CAAA;oBACD,WAAW,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAA;iBAC/B;aACF;iBAAM;gBACL,OAAO,CAAC,MAAM,CACZ,oFAAoF,EACpF,MAAM,CACP,CAAA;aACF;YACD,KAAK,CAAC,SAAS,EAAE,CAAA;YACjB,OAAO,CAAC,UAAU,CAAC,KAAK,CAAC,CAAA;SAC1B;aAAM;YACL,oBAAoB,CAClB,kFAAkF,CACnF,CAAA;SACF;IACH,CAAC;IAED,SAAS,UAAU;QACjB,oBAAoB,CAAC,SAAS,CAAC,CAAA;QAC/B,aAAa,CAAC,UAAU,GAAG,CAAC,CAAC,CAAA;IAC/B,CAAC;IAED,SAAS,cAAc;QACrB,QAAQ,UAAU,EAAE;YAClB,KAAK,CAAC;gBACJ,OAAO,CAAC,SAAS,CAAA;YACnB,KAAK,CAAC;gBACJ,OAAO,CAAC,CAAC,SAAS,IAAI,SAAS,KAAI,YAAY,aAAZ,YAAY,uBAAZ,YAAY,CAAE,IAAI,CAAA,IAAI,QAAQ,CAAC,CAAA;YACpE;gBACE,OAAO,IAAI,CAAA;SACd;IACH,CAAC;IAED,OAAO,CACL,uCAAK,SAAS,EAAE,OAAO,CAAC,IAAI;QAC1B,8BAAC,kBAAO,IACN,SAAS,EAAE,OAAO,CAAC,OAAO,EAC1B,UAAU,EAAE,UAAU,EACtB,WAAW,EAAC,UAAU,IAErB,KAAK,CAAC,GAAG,CAAC,CAAC,KAAK,EAAE,GAAG,EAAE,EAAE,CAAC,CACzB,8BAAC,eAAI,IAAC,GAAG,EAAE,KAAK;YACd,8BAAC,oBAAS,QAAE,KAAK,CAAa;YAC9B,8BAAC,sBAAW;gBACT,cAAc,CAAC,GAAG,CAAC;gBACpB,uCAAK,SAAS,EAAE,OAAO,CAAC,gBAAgB;oBACtC,8BAAC,iBAAM,IACL,QAAQ,EAAE,UAAU,KAAK,CAAC,EAC1B,OAAO,EAAE,UAAU,EACnB,SAAS,EAAE,OAAO,CAAC,MAAM,WAGlB;oBACT,8BAAC,iBAAM,IACL,QAAQ,EAAE,cAAc,EAAE,EAC1B,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,UAAU,EACnB,SAAS,EAAE,OAAO,CAAC,MAAM,iBACb,oBAAoB,IAE/B,UAAU,KAAK,KAAK,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,CAC1C,CACL;gBACL,iBAAiB,CAAC,CAAC,CAAC,CACnB,uCAAK,SAAS,EAAE,OAAO,CAAC,cAAc;oBACpC,8BAAC,gBAAK,IAAC,QAAQ,EAAC,OAAO,IAAE,iBAAiB,CAAS,CAC/C,CACP,CAAC,CAAC,CAAC,IAAI,CACI,CACT,CACR,CAAC,CACM,CACN,CACP,CAAA;AACH,CAAC;AACD,kBAAe,IAAA,qBAAQ,EAAC,gBAAgB,CAAC,CAAA"}

package/dist/AddTrackWidget/components/TrackSourceSelect.js

@@ -3,13 +3,13 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importDefault(require("react"));
-var ui_1 = require("@jbrowse/core/ui");
-var material_1 = require("@mui/material");
-var mui_1 = require("tss-react/mui");
-var mobx_state_tree_1 = require("mobx-state-tree");
-var mobx_react_1 = require("mobx-react");
-var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
+const react_1 = __importDefault(require("react"));
+const ui_1 = require("@jbrowse/core/ui");
+const material_1 = require("@mui/material");
+const mui_1 = require("tss-react/mui");
+const mobx_state_tree_1 = require("mobx-state-tree");
+const mobx_react_1 = require("mobx-react");
+const useStyles = (0, mui_1.makeStyles)()(theme => ({
     paper: {
         display: 'flex',
         flexDirection: 'column',
@@ -18,12 +18,11 @@ var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
     spacer: {
         height: theme.spacing(8),
     },
-}); });
-function TrackSourceSelect(_a) {
-    var model = _a.model;
-    var classes = useStyles().classes;
+}));
+function TrackSourceSelect({ model }) {
+    const { classes } = useStyles();
     // eslint-disable-next-line @typescript-eslint/no-explicit-any
-    var rootModel = (0, mobx_state_tree_1.getRoot)(model);
+    const rootModel = (0, mobx_state_tree_1.getRoot)(model);
     return (react_1.default.createElement(material_1.Paper, { className: classes.paper },
         react_1.default.createElement(ui_1.FileSelector, { name: "Main file", description: "", location: model.trackData, setLocation: model.setTrackData, setName: model.setTrackName, rootModel: rootModel }),
         react_1.default.createElement("div", { className: classes.spacer }),

package/dist/AddTrackWidget/components/TrackSourceSelect.js.map

@@ -1 +1 @@
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+{"version":3,"file":"TrackSourceSelect.js","sourceRoot":"","sources":["../../../src/AddTrackWidget/components/TrackSourceSelect.tsx"],"names":[],"mappings":";;;;;AAAA,kDAAyB;AACzB,yCAA+C;AAC/C,4CAAqC;AACrC,uCAA0C;AAC1C,qDAAyC;AACzC,2CAAqC;AAKrC,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,KAAK,EAAE;QACL,OAAO,EAAE,MAAM;QACf,aAAa,EAAE,QAAQ;QACvB,OAAO,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC1B;IACD,MAAM,EAAE;QACN,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,iBAAiB,CAAC,EAAE,KAAK,EAA4B;IAC5D,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,8DAA8D;IAC9D,MAAM,SAAS,GAAG,IAAA,yBAAO,EAAM,KAAK,CAAC,CAAA;IAErC,OAAO,CACL,8BAAC,gBAAK,IAAC,SAAS,EAAE,OAAO,CAAC,KAAK;QAC7B,8BAAC,iBAAY,IACX,IAAI,EAAC,WAAW,EAChB,WAAW,EAAC,EAAE,EACd,QAAQ,EAAE,KAAK,CAAC,SAAS,EACzB,WAAW,EAAE,KAAK,CAAC,YAAY,EAC/B,OAAO,EAAE,KAAK,CAAC,YAAY,EAC3B,SAAS,EAAE,SAAS,GACpB;QACF,uCAAK,SAAS,EAAE,OAAO,CAAC,MAAM,GAAI;QAClC,8BAAC,iBAAY,IACX,IAAI,EAAC,YAAY,EACjB,WAAW,EAAC,qHAAqH,EACjI,QAAQ,EAAE,KAAK,CAAC,cAAc,EAC9B,WAAW,EAAE,KAAK,CAAC,iBAAiB,EACpC,OAAO,EAAE,KAAK,CAAC,YAAY,EAC3B,SAAS,EAAE,SAAS,GACpB,CACI,CACT,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,iBAAiB,CAAC,CAAA"}

package/dist/AddTrackWidget/index.js

@@ -4,7 +4,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.configSchema = exports.stateModelFactory = void 0;
-var configuration_1 = require("@jbrowse/core/configuration");
+const configuration_1 = require("@jbrowse/core/configuration");
 var model_1 = require("./model");
 Object.defineProperty(exports, "stateModelFactory", { enumerable: true, get: function () { return __importDefault(model_1).default; } });
 exports.configSchema = (0, configuration_1.ConfigurationSchema)('AddTrackWidget', {});

package/dist/AddTrackWidget/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/AddTrackWidget/index.js"],"names":[],"mappings":";;;;;;AAAA,6DAAiE;AAEjE,iCAAsD;AAA7C,2HAAA,OAAO,OAAqB;AACxB,QAAA,YAAY,GAAG,IAAA,mCAAmB,EAAC,gBAAgB,EAAE,EAAE,CAAC,CAAA"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/AddTrackWidget/index.js"],"names":[],"mappings":";;;;;;AAAA,+DAAiE;AAEjE,iCAAsD;AAA7C,2HAAA,OAAO,OAAqB;AACxB,QAAA,YAAY,GAAG,IAAA,mCAAmB,EAAC,gBAAgB,EAAE,EAAE,CAAC,CAAA"}

package/dist/AddTrackWidget/model.js

@@ -1,10 +1,9 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-var mobx_state_tree_1 = require("mobx-state-tree");
-var mst_1 = require("@jbrowse/core/util/types/mst");
-var tracks_1 = require("@jbrowse/core/util/tracks");
-function isAbsoluteUrl(url) {
-    if (url === void 0) { url = ''; }
+const mobx_state_tree_1 = require("mobx-state-tree");
+const mst_1 = require("@jbrowse/core/util/types/mst");
+const tracks_1 = require("@jbrowse/core/util/tracks");
+function isAbsoluteUrl(url = '') {
     try {
         new URL(url);
         return true;
@@ -20,7 +19,7 @@ function f(pluginManager) {
         type: mobx_state_tree_1.types.literal('AddTrackWidget'),
         view: mobx_state_tree_1.types.safeReference(pluginManager.pluggableMstType('view', 'stateModel')),
     })
-        .volatile(function () { return ({
+        .volatile(() => ({
         trackSource: 'fromFile',
         trackData: undefined,
         indexTrackData: undefined,
@@ -31,36 +30,36 @@ function f(pluginManager) {
         adapterHint: '',
         textIndexTrack: true,
         textIndexingConf: undefined,
-    }); })
-        .actions(function (self) { return ({
-        setAdapterHint: function (obj) {
+    }))
+        .actions(self => ({
+        setAdapterHint(obj) {
             self.adapterHint = obj;
         },
-        setTrackSource: function (str) {
+        setTrackSource(str) {
             self.trackSource = str;
         },
-        setTextIndexingConf: function (conf) {
+        setTextIndexingConf(conf) {
             self.textIndexingConf = conf;
         },
-        setTextIndexTrack: function (flag) {
+        setTextIndexTrack(flag) {
             self.textIndexTrack = flag;
         },
-        setTrackData: function (obj) {
+        setTrackData(obj) {
             self.trackData = obj;
         },
-        setIndexTrackData: function (obj) {
+        setIndexTrackData(obj) {
             self.indexTrackData = obj;
         },
-        setAssembly: function (str) {
+        setAssembly(str) {
             self.altAssemblyName = str;
         },
-        setTrackName: function (str) {
+        setTrackName(str) {
             self.altTrackName = str;
         },
-        setTrackType: function (str) {
+        setTrackType(str) {
             self.altTrackType = str;
         },
-        clearData: function () {
+        clearData() {
             self.trackSource = '';
             self.altTrackName = '';
             self.altTrackType = '';
@@ -71,10 +70,10 @@ function f(pluginManager) {
             self.textIndexingConf = undefined;
             self.textIndexTrack = true;
         },
-    }); })
-        .views(function (self) { return ({
+    }))
+        .views(self => ({
         get trackAdapter() {
-            var trackData = self.trackData, indexTrackData = self.indexTrackData, adapterHint = self.adapterHint;
+            const { trackData, indexTrackData, adapterHint } = self;
             return trackData
                 ? (0, tracks_1.guessAdapter)(trackData, indexTrackData, adapterHint, self)
                 : undefined;
@@ -85,7 +84,7 @@ function f(pluginManager) {
         },
         get isFtp() {
             var _a, _b;
-            var track = self.trackData, index = self.indexTrackData;
+            const { trackData: track, indexTrackData: index } = self;
             return !!(
             // @ts-ignore
             (((_a = index === null || index === void 0 ? void 0 : index.uri) === null || _a === void 0 ? void 0 : _a.startsWith('ftp://')) || ((_b = track === null || track === void 0 ? void 0 : track.uri) === null || _b === void 0 ? void 0 : _b.startsWith('ftp://'))));
@@ -93,13 +92,13 @@ function f(pluginManager) {
         get isRelativeTrackUrl() {
             var _a;
             // @ts-ignore
-            var uri = (_a = self.trackData) === null || _a === void 0 ? void 0 : _a.uri;
+            const uri = (_a = self.trackData) === null || _a === void 0 ? void 0 : _a.uri;
             return uri ? !isAbsoluteUrl(uri) : false;
         },
         get isRelativeIndexUrl() {
             var _a;
             // @ts-ignore
-            var uri = (_a = self.indexTrackData) === null || _a === void 0 ? void 0 : _a.uri;
+            const uri = (_a = self.indexTrackData) === null || _a === void 0 ? void 0 : _a.uri;
             return uri ? !isAbsoluteUrl(uri) : false;
         },
         get isRelativeUrl() {
@@ -133,21 +132,26 @@ function f(pluginManager) {
                     ? (0, tracks_1.guessTrackType)(this.trackAdapter.type, self)
                     : ''));
         },
-    }); })
-        .views(function (self) { return ({
+    }))
+        .views(self => ({
         get warningMessage() {
             if (self.isFtp) {
-                return "Warning: JBrowse cannot access files using the ftp protocol";
+                return `Warning: JBrowse cannot access files using the ftp protocol`;
             }
             else if (self.isRelativeUrl) {
-                return "Warning: one or more of your files do not provide the protocol e.g.\n          https://, please provide an absolute URL unless you are sure a\n          relative URL is intended.";
+                return `Warning: one or more of your files do not provide the protocol e.g.
+          https://, please provide an absolute URL unless you are sure a
+          relative URL is intended.`;
             }
             else if (self.wrongProtocol) {
-                return "Warning: You entered a http:// resources but we cannot access HTTP\n          resources from JBrowse when it is running on https. Please use an\n          https URL for your track, or access the JBrowse app from the http\n          protocol";
+                return `Warning: You entered a http:// resources but we cannot access HTTP
+          resources from JBrowse when it is running on https. Please use an
+          https URL for your track, or access the JBrowse app from the http
+          protocol`;
             }
             return '';
         },
-    }); });
+    }));
 }
 exports.default = f;
 //# sourceMappingURL=model.js.map

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+{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/AddTrackWidget/model.ts"],"names":[],"mappings":";;AAAA,qDAAiD;AAEjD,sDAAwD;AAExD,sDAKkC;AAElC,SAAS,aAAa,CAAC,GAAG,GAAG,EAAE;IAC7B,IAAI;QACF,IAAI,GAAG,CAAC,GAAG,CAAC,CAAA;QACZ,OAAO,IAAI,CAAA;KACZ;IAAC,OAAO,KAAK,EAAE;QACd,OAAO,GAAG,CAAC,UAAU,CAAC,GAAG,CAAC,CAAA;KAC3B;AACH,CAAC;AAKD,SAAwB,CAAC,CAAC,aAA4B;IACpD,OAAO,uBAAK;SACT,KAAK,CAAC,eAAe,EAAE;QACtB,EAAE,EAAE,eAAS;QACb,IAAI,EAAE,uBAAK,CAAC,OAAO,CAAC,gBAAgB,CAAC;QACrC,IAAI,EAAE,uBAAK,CAAC,aAAa,CACvB,aAAa,CAAC,gBAAgB,CAAC,MAAM,EAAE,YAAY,CAAC,CACrD;KACF,CAAC;SACD,QAAQ,CAAC,GAAG,EAAE,CAAC,CAAC;QACf,WAAW,EAAE,UAAU;QACvB,SAAS,EAAE,SAAqC;QAChD,cAAc,EAAE,SAAqC;QAErD,OAAO;QACP,eAAe,EAAE,EAAE;QACnB,YAAY,EAAE,EAAE;QAChB,YAAY,EAAE,EAAE;QAEhB,WAAW,EAAE,EAAE;QACf,cAAc,EAAE,IAAI;QACpB,gBAAgB,EAAE,SAAqC;KACxD,CAAC,CAAC;SACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB,cAAc,CAAC,GAAW;YACxB,IAAI,CAAC,WAAW,GAAG,GAAG,CAAA;QACxB,CAAC;QACD,cAAc,CAAC,GAAW;YACxB,IAAI,CAAC,WAAW,GAAG,GAAG,CAAA;QACxB,CAAC;QACD,mBAAmB,CAAC,IAAkB;YACpC,IAAI,CAAC,gBAAgB,GAAG,IAAI,CAAA;QAC9B,CAAC;QACD,iBAAiB,CAAC,IAAa;YAC7B,IAAI,CAAC,cAAc,GAAG,IAAI,CAAA;QAC5B,CAAC;QACD,YAAY,CAAC,GAAiB;YAC5B,IAAI,CAAC,SAAS,GAAG,GAAG,CAAA;QACtB,CAAC;QACD,iBAAiB,CAAC,GAAiB;YACjC,IAAI,CAAC,cAAc,GAAG,GAAG,CAAA;QAC3B,CAAC;QACD,WAAW,CAAC,GAAW;YACrB,IAAI,CAAC,eAAe,GAAG,GAAG,CAAA;QAC5B,CAAC;QACD,YAAY,CAAC,GAAW;YACtB,IAAI,CAAC,YAAY,GAAG,GAAG,CAAA;QACzB,CAAC;QACD,YAAY,CAAC,GAAW;YACtB,IAAI,CAAC,YAAY,GAAG,GAAG,CAAA;QACzB,CAAC;QAED,SAAS;YACP,IAAI,CAAC,WAAW,GAAG,EAAE,CAAA;YACrB,IAAI,CAAC,YAAY,GAAG,EAAE,CAAA;YACtB,IAAI,CAAC,YAAY,GAAG,EAAE,CAAA;YACtB,IAAI,CAAC,eAAe,GAAG,EAAE,CAAA;YACzB,IAAI,CAAC,WAAW,GAAG,EAAE,CAAA;YACrB,IAAI,CAAC,cAAc,GAAG,SAAS,CAAA;YAC/B,IAAI,CAAC,SAAS,GAAG,SAAS,CAAA;YAC1B,IAAI,CAAC,gBAAgB,GAAG,SAAS,CAAA;YACjC,IAAI,CAAC,cAAc,GAAG,IAAI,CAAA;QAC5B,CAAC;KACF,CAAC,CAAC;SACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACd,IAAI,YAAY;YACd,MAAM,EAAE,SAAS,EAAE,cAAc,EAAE,WAAW,EAAE,GAAG,IAAI,CAAA;YAEvD,OAAO,SAAS;gBACd,CAAC,CAAC,IAAA,qBAAY,EAAC,SAAS,EAAE,cAAc,EAAE,WAAW,EAAE,IAAI,CAAC;gBAC5D,CAAC,CAAC,SAAS,CAAA;QACf,CAAC;QAED,IAAI,SAAS;YACX,OAAO,CACL,IAAI,CAAC,YAAY;gBACjB,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,CAAC,IAAA,oBAAW,EAAC,IAAI,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CACpD,CAAA;QACH,CAAC;QAED,IAAI,KAAK;;YACP,MAAM,EAAE,SAAS,EAAE,KAAK,EAAE,cAAc,EAAE,KAAK,EAAE,GAAG,IAAI,CAAA;YACxD,OAAO,CAAC,CAAC;YACP,aAAa;YACb,CAAC,CAAA,MAAA,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,GAAG,0CAAE,UAAU,CAAC,QAAQ,CAAC,MAAI,MAAA,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,GAAG,0CAAE,UAAU,CAAC,QAAQ,CAAC,CAAA,CAAC,CACvE,CAAA;QACH,CAAC;QAED,IAAI,kBAAkB;;YACpB,aAAa;YACb,MAAM,GAAG,GAAG,MAAA,IAAI,CAAC,SAAS,0CAAE,GAAG,CAAA;YAC/B,OAAO,GAAG,CAAC,CAAC,CAAC,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAA;QAC1C,CAAC;QACD,IAAI,kBAAkB;;YACpB,aAAa;YACb,MAAM,GAAG,GAAG,MAAA,IAAI,CAAC,cAAc,0CAAE,GAAG,CAAA;YACpC,OAAO,GAAG,CAAC,CAAC,CAAC,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAA;QAC1C,CAAC;QACD,IAAI,aAAa;YACf,OAAO,IAAI,CAAC,kBAAkB,IAAI,IAAI,CAAC,kBAAkB,CAAA;QAC3D,CAAC;QAED,IAAI,SAAS;;YACX,aAAa;YACb,OAAO,MAAA,MAAA,IAAI,CAAC,SAAS,0CAAE,GAAG,0CAAE,UAAU,CAAC,SAAS,CAAC,CAAA;QACnD,CAAC;QACD,IAAI,SAAS;;YACX,aAAa;YACb,OAAO,MAAA,MAAA,IAAI,CAAC,cAAc,0CAAE,GAAG,0CAAE,UAAU,CAAC,SAAS,CAAC,CAAA;QACxD,CAAC;QAED,IAAI,aAAa;YACf,OAAO,CACL,MAAM,CAAC,QAAQ,CAAC,QAAQ,KAAK,QAAQ;gBACrC,CAAC,IAAI,CAAC,SAAS,IAAI,IAAI,CAAC,SAAS,CAAC,CACnC,CAAA;QACH,CAAC;QAED,IAAI,WAAW;;YACb,OAAO,CAAA,MAAA,IAAI,CAAC,YAAY,0CAAE,IAAI,MAAK,oBAAW,CAAA;QAChD,CAAC;QAED,IAAI,QAAQ;;YACV,OAAO,IAAI,CAAC,eAAe,KAAI,MAAA,IAAI,CAAC,IAAI,CAAC,aAAa,0CAAG,CAAC,CAAC,CAAA,CAAA;QAC7D,CAAC;QAED,IAAI,SAAS;YACX,OAAO,CACL,IAAI,CAAC,YAAY;gBACjB,CAAC,IAAI,CAAC,YAAY;oBAChB,CAAC,CAAC,IAAA,uBAAc,EAAC,IAAI,CAAC,YAAY,CAAC,IAAI,EAAE,IAAI,CAAC;oBAC9C,CAAC,CAAC,EAAE,CAAC,CACR,CAAA;QACH,CAAC;KACF,CAAC,CAAC;SACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACd,IAAI,cAAc;YAChB,IAAI,IAAI,CAAC,KAAK,EAAE;gBACd,OAAO,6DAA6D,CAAA;aACrE;iBAAM,IAAI,IAAI,CAAC,aAAa,EAAE;gBAC7B,OAAO;;oCAEmB,CAAA;aAC3B;iBAAM,IAAI,IAAI,CAAC,aAAa,EAAE;gBAC7B,OAAO;;;mBAGE,CAAA;aACV;YACD,OAAO,EAAE,CAAA;QACX,CAAC;KACF,CAAC,CAAC,CAAA;AACP,CAAC;AAxJD,oBAwJC"}

package/dist/AssemblyManager/AssemblyAddForm.js

@@ -22,40 +22,24 @@ var __importStar = (this && this.__importStar) || function (mod) {
     __setModuleDefault(result, mod);
     return result;
 };
-var __read = (this && this.__read) || function (o, n) {
-    var m = typeof Symbol === "function" && o[Symbol.iterator];
-    if (!m) return o;
-    var i = m.call(o), r, ar = [], e;
-    try {
-        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
-    }
-    catch (error) { e = { error: error }; }
-    finally {
-        try {
-            if (r && !r.done && (m = i["return"])) m.call(i);
-        }
-        finally { if (e) throw e.error; }
-    }
-    return ar;
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importStar(require("react"));
-var mobx_react_1 = require("mobx-react");
-var FileSelector_1 = __importDefault(require("@jbrowse/core/ui/FileSelector"));
-var material_1 = require("@mui/material");
-var mui_1 = require("tss-react/mui");
-var Add_1 = __importDefault(require("@mui/icons-material/Add"));
-var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
+const react_1 = __importStar(require("react"));
+const mobx_react_1 = require("mobx-react");
+const FileSelector_1 = __importDefault(require("@jbrowse/core/ui/FileSelector"));
+const material_1 = require("@mui/material");
+const mui_1 = require("tss-react/mui");
+const Add_1 = __importDefault(require("@mui/icons-material/Add"));
+const useStyles = (0, mui_1.makeStyles)()(theme => ({
     root: {
         flexGrow: 1,
         overflow: 'hidden',
         padding: theme.spacing(0, 3),
     },
     paper: {
-        margin: "".concat(theme.spacing(1), "px auto"),
+        margin: `${theme.spacing(1)}px auto`,
         padding: theme.spacing(2),
     },
     createButton: {
@@ -64,62 +48,59 @@ var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
     },
     paperContent: {
         flex: 'auto',
-        margin: "".concat(theme.spacing(1), "px auto"),
+        margin: `${theme.spacing(1)}px auto`,
         padding: theme.spacing(1),
         overflow: 'auto',
     },
-}); });
-var AdapterSelector = (0, mobx_react_1.observer)(function (_a) {
-    var adapterSelection = _a.adapterSelection, setAdapterSelection = _a.setAdapterSelection, adapterTypes = _a.adapterTypes;
-    return (react_1.default.createElement(material_1.TextField, { value: adapterSelection, label: "Type", select: true, helperText: "Type of adapter to use", fullWidth: true, onChange: function (event) {
+}));
+const AdapterSelector = (0, mobx_react_1.observer)(({ adapterSelection, setAdapterSelection, adapterTypes, }) => {
+    return (react_1.default.createElement(material_1.TextField, { value: adapterSelection, label: "Type", select: true, helperText: "Type of adapter to use", fullWidth: true, onChange: event => {
             setAdapterSelection(event.target.value);
-        } }, adapterTypes.map(function (str) { return (react_1.default.createElement(material_1.MenuItem, { key: str, value: str }, str)); })));
+        } }, adapterTypes.map(str => (react_1.default.createElement(material_1.MenuItem, { key: str, value: str }, str)))));
 });
-var AdapterInput = (0, mobx_react_1.observer)(function (_a) {
-    var adapterSelection = _a.adapterSelection, fastaLocation = _a.fastaLocation, setFastaLocation = _a.setFastaLocation, faiLocation = _a.faiLocation, setFaiLocation = _a.setFaiLocation, gziLocation = _a.gziLocation, setGziLocation = _a.setGziLocation, twoBitLocation = _a.twoBitLocation, setTwoBitLocation = _a.setTwoBitLocation, chromSizesLocation = _a.chromSizesLocation, setChromSizesLocation = _a.setChromSizesLocation;
+const AdapterInput = (0, mobx_react_1.observer)(({ adapterSelection, fastaLocation, setFastaLocation, faiLocation, setFaiLocation, gziLocation, setGziLocation, twoBitLocation, setTwoBitLocation, chromSizesLocation, setChromSizesLocation, }) => {
     if (adapterSelection === 'IndexedFastaAdapter' ||
         adapterSelection === 'BgzipFastaAdapter') {
         return (react_1.default.createElement(material_1.Grid, { container: true, spacing: 2 },
             react_1.default.createElement(material_1.Grid, { item: true },
-                react_1.default.createElement(FileSelector_1.default, { name: "fastaLocation", location: fastaLocation, setLocation: function (loc) { return setFastaLocation(loc); } })),
+                react_1.default.createElement(FileSelector_1.default, { name: "fastaLocation", location: fastaLocation, setLocation: loc => setFastaLocation(loc) })),
             react_1.default.createElement(material_1.Grid, { item: true },
-                react_1.default.createElement(FileSelector_1.default, { name: "faiLocation", location: faiLocation, setLocation: function (loc) { return setFaiLocation(loc); } })),
+                react_1.default.createElement(FileSelector_1.default, { name: "faiLocation", location: faiLocation, setLocation: loc => setFaiLocation(loc) })),
             adapterSelection === 'BgzipFastaAdapter' ? (react_1.default.createElement(material_1.Grid, { item: true },
-                react_1.default.createElement(FileSelector_1.default, { name: "gziLocation", location: gziLocation, setLocation: function (loc) { return setGziLocation(loc); } }))) : null));
+                react_1.default.createElement(FileSelector_1.default, { name: "gziLocation", location: gziLocation, setLocation: loc => setGziLocation(loc) }))) : null));
     }
     if (adapterSelection === 'TwoBitAdapter') {
         return (react_1.default.createElement(material_1.Grid, { container: true, spacing: 2 },
             react_1.default.createElement(material_1.Grid, { item: true },
-                react_1.default.createElement(FileSelector_1.default, { name: "twoBitLocation", location: twoBitLocation, setLocation: function (loc) { return setTwoBitLocation(loc); } })),
+                react_1.default.createElement(FileSelector_1.default, { name: "twoBitLocation", location: twoBitLocation, setLocation: loc => setTwoBitLocation(loc) })),
             react_1.default.createElement(material_1.Grid, { item: true },
-                react_1.default.createElement(FileSelector_1.default, { name: "chromSizesLocation (optional, can be added to speed up loading 2bit files with many contigs)", location: chromSizesLocation, setLocation: function (loc) { return setChromSizesLocation(loc); } }))));
+                react_1.default.createElement(FileSelector_1.default, { name: "chromSizesLocation (optional, can be added to speed up loading 2bit files with many contigs)", location: chromSizesLocation, setLocation: loc => setChromSizesLocation(loc) }))));
     }
     return null;
 });
-var blank = { uri: '' };
-var AssemblyAddForm = (0, mobx_react_1.observer)(function (_a) {
-    var rootModel = _a.rootModel, setFormOpen = _a.setFormOpen;
-    var classes = useStyles().classes;
-    var adapterTypes = [
+const blank = { uri: '' };
+const AssemblyAddForm = (0, mobx_react_1.observer)(({ rootModel, setFormOpen, }) => {
+    const { classes } = useStyles();
+    const adapterTypes = [
         'IndexedFastaAdapter',
         'BgzipFastaAdapter',
         'TwoBitAdapter',
     ];
-    var _b = __read((0, react_1.useState)(''), 2), assemblyName = _b[0], setAssemblyName = _b[1];
-    var _c = __read((0, react_1.useState)(''), 2), assemblyDisplayName = _c[0], setAssemblyDisplayName = _c[1];
-    var _d = __read((0, react_1.useState)(adapterTypes[0]), 2), adapterSelection = _d[0], setAdapterSelection = _d[1];
-    var _e = __read((0, react_1.useState)(blank), 2), fastaLocation = _e[0], setFastaLocation = _e[1];
-    var _f = __read((0, react_1.useState)(blank), 2), faiLocation = _f[0], setFaiLocation = _f[1];
-    var _g = __read((0, react_1.useState)(blank), 2), gziLocation = _g[0], setGziLocation = _g[1];
-    var _h = __read((0, react_1.useState)(blank), 2), twoBitLocation = _h[0], setTwoBitLocation = _h[1];
-    var _j = __read((0, react_1.useState)(blank), 2), chromSizesLocation = _j[0], setChromSizesLocation = _j[1];
+    const [assemblyName, setAssemblyName] = (0, react_1.useState)('');
+    const [assemblyDisplayName, setAssemblyDisplayName] = (0, react_1.useState)('');
+    const [adapterSelection, setAdapterSelection] = (0, react_1.useState)(adapterTypes[0]);
+    const [fastaLocation, setFastaLocation] = (0, react_1.useState)(blank);
+    const [faiLocation, setFaiLocation] = (0, react_1.useState)(blank);
+    const [gziLocation, setGziLocation] = (0, react_1.useState)(blank);
+    const [twoBitLocation, setTwoBitLocation] = (0, react_1.useState)(blank);
+    const [chromSizesLocation, setChromSizesLocation] = (0, react_1.useState)(blank);
     function createAssembly() {
         if (assemblyName === '') {
             rootModel.session.notify("Can't create an assembly without a name");
         }
         else {
             setFormOpen(false);
-            var newAssembly = void 0;
+            let newAssembly;
             if (adapterSelection === 'IndexedFastaAdapter') {
                 newAssembly = {
                     name: assemblyName,
@@ -127,8 +108,8 @@ var AssemblyAddForm = (0, mobx_react_1.observer)(function (_a) {
                     sequence: {
                         adapter: {
                             type: 'IndexedFastaAdapter',
-                            fastaLocation: fastaLocation,
-                            faiLocation: faiLocation,
+                            fastaLocation,
+                            faiLocation,
                         },
                     },
                 };
@@ -140,9 +121,9 @@ var AssemblyAddForm = (0, mobx_react_1.observer)(function (_a) {
                     sequence: {
                         adapter: {
                             type: 'BgzipFastaAdapter',
-                            fastaLocation: fastaLocation,
-                            faiLocation: faiLocation,
-                            gziLocation: gziLocation,
+                            fastaLocation,
+                            faiLocation,
+                            gziLocation,
                         },
                     },
                 };
@@ -154,20 +135,20 @@ var AssemblyAddForm = (0, mobx_react_1.observer)(function (_a) {
                     sequence: {
                         adapter: {
                             type: 'TwoBitAdapter',
-                            twoBitLocation: twoBitLocation,
-                            chromSizesLocation: chromSizesLocation,
+                            twoBitLocation,
+                            chromSizesLocation,
                         },
                     },
                 };
             }
             rootModel.jbrowse.addAssemblyConf(newAssembly);
-            rootModel.session.notify("Successfully added ".concat(assemblyName, " assembly to JBrowse 2"), 'success');
+            rootModel.session.notify(`Successfully added ${assemblyName} assembly to JBrowse 2`, 'success');
         }
     }
     return (react_1.default.createElement("div", { className: classes.root },
         react_1.default.createElement(material_1.Paper, { className: classes.paper },
-            react_1.default.createElement(material_1.TextField, { id: "assembly-name", inputProps: { 'data-testid': 'assembly-name' }, label: "Assembly name", helperText: "The assembly name e.g. hg38", variant: "outlined", value: assemblyName, onChange: function (event) { return setAssemblyName(event.target.value); } }),
-            react_1.default.createElement(material_1.TextField, { id: "assembly-name", inputProps: { 'data-testid': 'assembly-display-name' }, label: "Assembly display name", helperText: 'A human readable display name for the assembly e.g. "Homo sapiens (hg38)"', variant: "outlined", value: assemblyDisplayName, onChange: function (event) { return setAssemblyDisplayName(event.target.value); } }),
+            react_1.default.createElement(material_1.TextField, { id: "assembly-name", inputProps: { 'data-testid': 'assembly-name' }, label: "Assembly name", helperText: "The assembly name e.g. hg38", variant: "outlined", value: assemblyName, onChange: event => setAssemblyName(event.target.value) }),
+            react_1.default.createElement(material_1.TextField, { id: "assembly-name", inputProps: { 'data-testid': 'assembly-display-name' }, label: "Assembly display name", helperText: 'A human readable display name for the assembly e.g. "Homo sapiens (hg38)"', variant: "outlined", value: assemblyDisplayName, onChange: event => setAssemblyDisplayName(event.target.value) }),
             react_1.default.createElement(AdapterSelector, { adapterSelection: adapterSelection, setAdapterSelection: setAdapterSelection, adapterTypes: adapterTypes }),
             react_1.default.createElement("div", { className: classes.paperContent },
                 react_1.default.createElement(AdapterInput, { adapterSelection: adapterSelection, fastaLocation: fastaLocation, setFastaLocation: setFastaLocation, faiLocation: faiLocation, setFaiLocation: setFaiLocation, gziLocation: gziLocation, setGziLocation: setGziLocation, twoBitLocation: twoBitLocation, setTwoBitLocation: setTwoBitLocation, chromSizesLocation: chromSizesLocation, setChromSizesLocation: setChromSizesLocation }))),

package/dist/AssemblyManager/AssemblyAddForm.js.map

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package/dist/AssemblyManager/AssemblyEditor.js

@@ -3,11 +3,10 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importDefault(require("react"));
-var mobx_react_1 = require("mobx-react");
-var plugin_config_1 = require("@jbrowse/plugin-config");
-var AssemblyEditor = (0, mobx_react_1.observer)(function (_a) {
-    var assembly = _a.assembly;
+const react_1 = __importDefault(require("react"));
+const mobx_react_1 = require("mobx-react");
+const plugin_config_1 = require("@jbrowse/plugin-config");
+const AssemblyEditor = (0, mobx_react_1.observer)(({ assembly, }) => {
     return react_1.default.createElement(plugin_config_1.ConfigurationEditor, { model: { target: assembly } });
 });
 exports.default = AssemblyEditor;

package/dist/AssemblyManager/AssemblyEditor.js.map

@@ -1 +1 @@
-{"version":3,"file":"AssemblyEditor.js","sourceRoot":"","sources":["../../src/AssemblyManager/AssemblyEditor.tsx"],"names":[],"mappings":";;;;;AAAA,gDAAyB;AACzB,yCAAqC;AACrC,wDAA4D;AAE5D,IAAM,cAAc,GAAG,IAAA,qBAAQ,EAC7B,UAAC,EAKA;QAJC,QAAQ,cAAA;IAKR,OAAO,8BAAC,mCAAmB,IAAC,KAAK,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,GAAI,CAAA;AAC7D,CAAC,CACF,CAAA;AAED,kBAAe,cAAc,CAAA"}
+{"version":3,"file":"AssemblyEditor.js","sourceRoot":"","sources":["../../src/AssemblyManager/AssemblyEditor.tsx"],"names":[],"mappings":";;;;;AAAA,kDAAyB;AACzB,2CAAqC;AACrC,0DAA4D;AAE5D,MAAM,cAAc,GAAG,IAAA,qBAAQ,EAC7B,CAAC,EACC,QAAQ,GAIT,EAAE,EAAE;IACH,OAAO,8BAAC,mCAAmB,IAAC,KAAK,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,GAAI,CAAA;AAC7D,CAAC,CACF,CAAA;AAED,kBAAe,cAAc,CAAA"}

package/dist/AssemblyManager/AssemblyManager.js

@@ -22,37 +22,21 @@ var __importStar = (this && this.__importStar) || function (mod) {
     __setModuleDefault(result, mod);
     return result;
 };
-var __read = (this && this.__read) || function (o, n) {
-    var m = typeof Symbol === "function" && o[Symbol.iterator];
-    if (!m) return o;
-    var i = m.call(o), r, ar = [], e;
-    try {
-        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
-    }
-    catch (error) { e = { error: error }; }
-    finally {
-        try {
-            if (r && !r.done && (m = i["return"])) m.call(i);
-        }
-        finally { if (e) throw e.error; }
-    }
-    return ar;
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importStar(require("react"));
-var mobx_react_1 = require("mobx-react");
-var mui_1 = require("tss-react/mui");
-var material_1 = require("@mui/material");
-var ArrowBackIos_1 = __importDefault(require("@mui/icons-material/ArrowBackIos"));
-var Close_1 = __importDefault(require("@mui/icons-material/Close"));
-var Add_1 = __importDefault(require("@mui/icons-material/Add"));
-var AssemblyTable_1 = __importDefault(require("./AssemblyTable"));
-var AssemblyAddForm_1 = __importDefault(require("./AssemblyAddForm"));
-var AssemblyEditor_1 = __importDefault(require("./AssemblyEditor"));
-var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
+const react_1 = __importStar(require("react"));
+const mobx_react_1 = require("mobx-react");
+const mui_1 = require("tss-react/mui");
+const material_1 = require("@mui/material");
+const ArrowBackIos_1 = __importDefault(require("@mui/icons-material/ArrowBackIos"));
+const Close_1 = __importDefault(require("@mui/icons-material/Close"));
+const Add_1 = __importDefault(require("@mui/icons-material/Add"));
+const AssemblyTable_1 = __importDefault(require("./AssemblyTable"));
+const AssemblyAddForm_1 = __importDefault(require("./AssemblyAddForm"));
+const AssemblyEditor_1 = __importDefault(require("./AssemblyEditor"));
+const useStyles = (0, mui_1.makeStyles)()(theme => ({
     titleBox: {
         color: '#fff',
         backgroundColor: theme.palette.primary.main,
@@ -73,26 +57,25 @@ var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
         top: theme.spacing(1),
         color: theme.palette.grey[500],
     },
-}); });
-var AssemblyManager = (0, mobx_react_1.observer)(function (_a) {
-    var rootModel = _a.rootModel, onClose = _a.onClose;
-    var classes = useStyles().classes;
-    var _b = __read((0, react_1.useState)(false), 2), isFormOpen = _b[0], setFormOpen = _b[1];
-    var _c = __read((0, react_1.useState)(false), 2), isAssemblyBeingEdited = _c[0], setIsAssemblyBeingEdited = _c[1];
-    var _d = __read((0, react_1.useState)(), 2), assemblyBeingEdited = _d[0], setAssemblyBeingEdited = _d[1];
-    var showAssemblyTable = !isFormOpen && !isAssemblyBeingEdited;
-    return (react_1.default.createElement(material_1.Dialog, { open: true, onClose: function () { return onClose(false); } },
+}));
+const AssemblyManager = (0, mobx_react_1.observer)(({ rootModel, onClose, }) => {
+    const { classes } = useStyles();
+    const [isFormOpen, setFormOpen] = (0, react_1.useState)(false);
+    const [isAssemblyBeingEdited, setIsAssemblyBeingEdited] = (0, react_1.useState)(false);
+    const [assemblyBeingEdited, setAssemblyBeingEdited] = (0, react_1.useState)();
+    const showAssemblyTable = !isFormOpen && !isAssemblyBeingEdited;
+    return (react_1.default.createElement(material_1.Dialog, { open: true, onClose: () => onClose(false) },
         react_1.default.createElement(material_1.DialogTitle, { className: classes.titleBox },
             showAssemblyTable ? 'Assembly manager' : null,
             isFormOpen ? (react_1.default.createElement(react_1.default.Fragment, null,
-                react_1.default.createElement(material_1.IconButton, { "aria-label": "back", className: classes.backButton, onClick: function () { return setFormOpen(false); } },
+                react_1.default.createElement(material_1.IconButton, { "aria-label": "back", className: classes.backButton, onClick: () => setFormOpen(false) },
                     react_1.default.createElement(ArrowBackIos_1.default, null)),
                 "Add new assembly")) : null,
             isAssemblyBeingEdited ? (react_1.default.createElement(react_1.default.Fragment, null,
-                react_1.default.createElement(material_1.IconButton, { "aria-label": "back", className: classes.backButton, onClick: function () { return setIsAssemblyBeingEdited(false); } },
+                react_1.default.createElement(material_1.IconButton, { "aria-label": "back", className: classes.backButton, onClick: () => setIsAssemblyBeingEdited(false) },
                     react_1.default.createElement(ArrowBackIos_1.default, null)),
                 returnAssemblyName(assemblyBeingEdited))) : null,
-            react_1.default.createElement(material_1.IconButton, { "aria-label": "close", className: classes.closeButton, onClick: function () { return onClose(false); } },
+            react_1.default.createElement(material_1.IconButton, { "aria-label": "close", className: classes.closeButton, onClick: () => onClose(false) },
                 react_1.default.createElement(Close_1.default, null))),
         react_1.default.createElement(material_1.DialogContent, null,
             react_1.default.createElement("div", { className: classes.dialogContent },
@@ -100,8 +83,8 @@ var AssemblyManager = (0, mobx_react_1.observer)(function (_a) {
                 isAssemblyBeingEdited ? (react_1.default.createElement(AssemblyEditor_1.default, { assembly: assemblyBeingEdited })) : null,
                 isFormOpen ? (react_1.default.createElement(AssemblyAddForm_1.default, { rootModel: rootModel, setFormOpen: setFormOpen })) : null)),
         react_1.default.createElement(material_1.DialogActions, null, showAssemblyTable ? (react_1.default.createElement(react_1.default.Fragment, null,
-            react_1.default.createElement(material_1.Button, { color: "secondary", variant: "contained", onClick: function () { return onClose(false); } }, "Close"),
-            react_1.default.createElement(material_1.Button, { variant: "contained", color: "secondary", startIcon: react_1.default.createElement(Add_1.default, null), onClick: function () { return setFormOpen(true); } }, "Add new assembly"))) : null)));
+            react_1.default.createElement(material_1.Button, { color: "secondary", variant: "contained", onClick: () => onClose(false) }, "Close"),
+            react_1.default.createElement(material_1.Button, { variant: "contained", color: "secondary", startIcon: react_1.default.createElement(Add_1.default, null), onClick: () => setFormOpen(true) }, "Add new assembly"))) : null)));
 });
 // eslint-disable-next-line @typescript-eslint/no-explicit-any
 function returnAssemblyName(assembly) {