@jbrowse/plugin-config 2.17.0 → 3.0.0

package/dist/FromConfigAdapter/FromConfigAdapter.js

@@ -4,10 +4,10 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.makeFeatures = makeFeatures;
+const configuration_1 = require("@jbrowse/core/configuration");
 const BaseAdapter_1 = require("@jbrowse/core/data_adapters/BaseAdapter");
-const simpleFeature_1 = __importDefault(require("@jbrowse/core/util/simpleFeature"));
 const rxjs_1 = require("@jbrowse/core/util/rxjs");
-const configuration_1 = require("@jbrowse/core/configuration");
+const simpleFeature_1 = __importDefault(require("@jbrowse/core/util/simpleFeature"));
 function makeFeatures(fdata) {
     const features = new Map();
     for (const entry of fdata) {
@@ -20,7 +20,6 @@ function makeFeatures(fdata) {
         }
         bucket.push(f);
     }
-    // sort the features on each reference sequence by start coordinate
     for (const refFeatures of features.values()) {
         refFeatures.sort((a, b) => a.get('start') - b.get('start'));
     }
@@ -53,6 +52,6 @@ class FromConfigAdapter extends BaseAdapter_1.BaseFeatureDataAdapter {
             observer.complete();
         });
     }
-    freeResources( /* { region } */) { }
+    freeResources() { }
 }
 exports.default = FromConfigAdapter;

package/dist/FromConfigAdapter/configSchema.d.ts

@@ -1,7 +1,4 @@
 declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    /**
-     * #slot
-     */
     features: {
         type: string;
         defaultValue: never[];

package/dist/FromConfigAdapter/configSchema.js

@@ -1,14 +1,8 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
-/**
- * #config FromConfigAdapter
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 const configSchema = (0, configuration_1.ConfigurationSchema)('FromConfigAdapter', {
-    /**
-     * #slot
-     */
     features: {
         type: 'frozen',
         defaultValue: [],

package/dist/FromConfigAdapter/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function FromConfigAdapterF(pluginManager: PluginManager): void;

package/dist/FromConfigAdapter/index.js

@@ -15,13 +15,23 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };

package/dist/FromConfigRegionsAdapter/FromConfigRegionsAdapter.d.ts

@@ -1,18 +1,11 @@
-import { BaseAdapter, RegionsAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
-import { AnyConfigurationModel } from '@jbrowse/core/configuration';
-import PluginManager from '@jbrowse/core/PluginManager';
-import { getSubAdapterType } from '@jbrowse/core/data_adapters/dataAdapterCache';
-/**
- * Adapter that just returns the features defined in its `features` configuration
- * key, like:
- *   `"features": [ { "refName": "ctgA", "start":1, "end":20 }, ... ]`
- */
+import { BaseAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
+import type PluginManager from '@jbrowse/core/PluginManager';
+import type { AnyConfigurationModel } from '@jbrowse/core/configuration';
+import type { RegionsAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
+import type { getSubAdapterType } from '@jbrowse/core/data_adapters/dataAdapterCache';
 export default class FromConfigRegionsAdapter extends BaseAdapter implements RegionsAdapter {
     private features;
     constructor(config: AnyConfigurationModel, getSubAdapter?: getSubAdapterType, pluginManager?: PluginManager);
-    /**
-     * Get refName, start, and end for all features after collapsing any overlaps
-     */
     getRegions(): Promise<{
         refName: string;
         start: number;

package/dist/FromConfigRegionsAdapter/FromConfigRegionsAdapter.js

@@ -1,25 +1,16 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-const BaseAdapter_1 = require("@jbrowse/core/data_adapters/BaseAdapter");
 const configuration_1 = require("@jbrowse/core/configuration");
+const BaseAdapter_1 = require("@jbrowse/core/data_adapters/BaseAdapter");
 const FromConfigAdapter_1 = require("../FromConfigAdapter/FromConfigAdapter");
-/**
- * Adapter that just returns the features defined in its `features` configuration
- * key, like:
- *   `"features": [ { "refName": "ctgA", "start":1, "end":20 }, ... ]`
- */
 class FromConfigRegionsAdapter extends BaseAdapter_1.BaseAdapter {
     constructor(config, getSubAdapter, pluginManager) {
         super(config, getSubAdapter, pluginManager);
         const f = (0, configuration_1.readConfObject)(config, 'features');
         this.features = (0, FromConfigAdapter_1.makeFeatures)(f);
     }
-    /**
-     * Get refName, start, and end for all features after collapsing any overlaps
-     */
     async getRegions() {
         const regions = [];
-        // recall: features are stored in this object sorted by start coordinate
         for (const [refName, features] of this.features) {
             let currentRegion;
             for (const feature of features) {
@@ -43,10 +34,9 @@ class FromConfigRegionsAdapter extends BaseAdapter_1.BaseAdapter {
                 regions.push(currentRegion);
             }
         }
-        // sort the regions by refName
         regions.sort((a, b) => a.refName.localeCompare(b.refName));
         return regions;
     }
-    freeResources( /* { region } */) { }
+    freeResources() { }
 }
 exports.default = FromConfigRegionsAdapter;

package/dist/FromConfigRegionsAdapter/configSchema.d.ts

@@ -1,7 +1,4 @@
 declare const regionsConfigSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    /**
-     * #slot
-     */
     features: {
         type: string;
         defaultValue: never[];

package/dist/FromConfigRegionsAdapter/configSchema.js

@@ -1,15 +1,8 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
-/**
- * #config FromConfigRegionsAdapter
- * used for specifying refNames+sizes of an assembly
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 const regionsConfigSchema = (0, configuration_1.ConfigurationSchema)('FromConfigRegionsAdapter', {
-    /**
-     * #slot
-     */
     features: {
         type: 'frozen',
         defaultValue: [],

package/dist/FromConfigRegionsAdapter/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function FromConfigRegionsAdapterF(pluginManager: PluginManager): void;

package/dist/FromConfigRegionsAdapter/index.js

@@ -15,13 +15,23 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };

package/dist/FromConfigSequenceAdapter/FromConfigSequenceAdapter.d.ts

@@ -1,26 +1,13 @@
-import { Feature } from '@jbrowse/core/util/simpleFeature';
-import { NoAssemblyRegion } from '@jbrowse/core/util/types';
-import { RegionsAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
 import FromConfigAdapter from '../FromConfigAdapter/FromConfigAdapter';
+import type { RegionsAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
+import type { Feature } from '@jbrowse/core/util/simpleFeature';
+import type { NoAssemblyRegion } from '@jbrowse/core/util/types';
 export default class FromConfigSequenceAdapter extends FromConfigAdapter implements RegionsAdapter {
-    /**
-     * Fetch features for a certain region
-     * @param region - Region
-     * @returns Observable of Feature objects in the region
-     */
     getFeatures(region: NoAssemblyRegion): import("rxjs").Observable<Feature>;
-    /**
-     * Get refName, start, and end for all features after collapsing any overlaps
-     */
     getRegions(): Promise<{
         start: number;
         end: number;
         refName: string;
     }[]>;
-    /**
-     * called to provide a hint that data tied to a certain region
-     * will not be needed for the foreseeable future and can be purged
-     * from caches, etc
-     */
     freeResources(): void;
 }

package/dist/FromConfigSequenceAdapter/FromConfigSequenceAdapter.js

@@ -3,18 +3,12 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-const simpleFeature_1 = __importDefault(require("@jbrowse/core/util/simpleFeature"));
 const rxjs_1 = require("@jbrowse/core/util/rxjs");
+const simpleFeature_1 = __importDefault(require("@jbrowse/core/util/simpleFeature"));
+const rxjs_2 = require("rxjs");
 const operators_1 = require("rxjs/operators");
-// locals
 const FromConfigAdapter_1 = __importDefault(require("../FromConfigAdapter/FromConfigAdapter"));
-const rxjs_2 = require("rxjs");
 class FromConfigSequenceAdapter extends FromConfigAdapter_1.default {
-    /**
-     * Fetch features for a certain region
-     * @param region - Region
-     * @returns Observable of Feature objects in the region
-     */
     getFeatures(region) {
         return (0, rxjs_1.ObservableCreate)(async (observer) => {
             const feats = await (0, rxjs_2.firstValueFrom)(super.getFeatures(region).pipe((0, operators_1.toArray)()));
@@ -31,12 +25,8 @@ class FromConfigSequenceAdapter extends FromConfigAdapter_1.default {
             observer.complete();
         });
     }
-    /**
-     * Get refName, start, and end for all features after collapsing any overlaps
-     */
     async getRegions() {
         const regions = [];
-        // recall: features are stored in this object sorted by start coordinate
         for (const [refName, features] of this.features) {
             let currentRegion;
             for (const feature of features) {
@@ -62,11 +52,6 @@ class FromConfigSequenceAdapter extends FromConfigAdapter_1.default {
         }
         return regions;
     }
-    /**
-     * called to provide a hint that data tied to a certain region
-     * will not be needed for the foreseeable future and can be purged
-     * from caches, etc
-     */
-    freeResources( /* { region } */) { }
+    freeResources() { }
 }
 exports.default = FromConfigSequenceAdapter;

package/dist/FromConfigSequenceAdapter/configSchema.d.ts

@@ -1,7 +1,4 @@
 declare const sequenceConfigSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    /**
-     * #slot
-     */
     features: {
         type: string;
         defaultValue: never[];

package/dist/FromConfigSequenceAdapter/configSchema.js

@@ -1,14 +1,8 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
-/**
- * #config FromConfigSequenceAdapter
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 const sequenceConfigSchema = (0, configuration_1.ConfigurationSchema)('FromConfigSequenceAdapter', {
-    /**
-     * #slot
-     */
     features: {
         type: 'frozen',
         defaultValue: [],

package/dist/FromConfigSequenceAdapter/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function FromConfigSequenceAdapterF(pluginManager: PluginManager): void;

package/dist/FromConfigSequenceAdapter/index.js

@@ -15,13 +15,23 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };

package/dist/NcbiSequenceReportAliasAdapter/NcbiSequenceReportAliasAdapter.d.ts

@@ -1,4 +1,5 @@
-import { BaseRefNameAliasAdapter, BaseAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
+import { BaseAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
+import type { BaseRefNameAliasAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
 export default class NcbiSequenceReportAliasAdapter extends BaseAdapter implements BaseRefNameAliasAdapter {
     getRefNameAliases(): Promise<{
         refName: string;

package/dist/NcbiSequenceReportAliasAdapter/configSchema.d.ts

@@ -1,7 +1,4 @@
 declare const NcbiSequenceReportAliasAdapterConfigSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    /**
-     * #slot
-     */
     location: {
         type: string;
         defaultValue: {

package/dist/NcbiSequenceReportAliasAdapter/configSchema.js

@@ -1,15 +1,8 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
-/**
- * #config NcbiSequenceReportAliasAdapter
- * can read "sequence_report.tsv" type files from NCBI
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 const NcbiSequenceReportAliasAdapterConfigSchema = (0, configuration_1.ConfigurationSchema)('NcbiSequenceReportAliasAdapter', {
-    /**
-     * #slot
-     */
     location: {
         type: 'fileLocation',
         defaultValue: {

package/dist/NcbiSequenceReportAliasAdapter/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function NcbiSequenceReportAliasAdapterF(pluginManager: PluginManager): void;

package/dist/NcbiSequenceReportAliasAdapter/index.js

@@ -15,13 +15,23 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };

package/dist/RefNameAliasAdapter/RefNameAliasAdapter.d.ts

@@ -1,4 +1,5 @@
-import { BaseRefNameAliasAdapter, BaseAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
+import { BaseAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
+import type { BaseRefNameAliasAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
 export default class RefNameAliasAdapter extends BaseAdapter implements BaseRefNameAliasAdapter {
     getRefNameAliases(): Promise<{
         refName: string;

package/dist/RefNameAliasAdapter/configSchema.d.ts

@@ -1,7 +1,4 @@
 declare const RefNameAliasAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    /**
-     * #slot
-     */
     location: {
         type: string;
         defaultValue: {
@@ -9,11 +6,6 @@ declare const RefNameAliasAdapter: import("@jbrowse/core/configuration/configura
             locationType: string;
         };
     };
-    /**
-     * #slot
-     * by default, the "ref names that match the fasta" are assumed to be in the
-     * first column (0), change this variable if needed
-     */
     refNameColumn: {
         type: string;
         defaultValue: number;

package/dist/RefNameAliasAdapter/configSchema.js

@@ -1,16 +1,8 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
-/**
- * #config RefNameAliasAdapter
- * can read "chromAliases" type files from UCSC or any tab separated file of
- * refName aliases
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 const RefNameAliasAdapter = (0, configuration_1.ConfigurationSchema)('RefNameAliasAdapter', {
-    /**
-     * #slot
-     */
     location: {
         type: 'fileLocation',
         defaultValue: {
@@ -18,11 +10,6 @@ const RefNameAliasAdapter = (0, configuration_1.ConfigurationSchema)('RefNameAli
             locationType: 'UriLocation',
         },
     },
-    /**
-     * #slot
-     * by default, the "ref names that match the fasta" are assumed to be in the
-     * first column (0), change this variable if needed
-     */
     refNameColumn: {
         type: 'number',
         defaultValue: 0,

package/dist/RefNameAliasAdapter/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function RefNameAliasAdapterF(pluginManager: PluginManager): void;

package/dist/RefNameAliasAdapter/index.js

@@ -15,13 +15,23 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };

package/dist/index.d.ts

@@ -1,11 +1,11 @@
 import Plugin from '@jbrowse/core/Plugin';
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 declare const LazyConfigurationEditorComponent: import("react").LazyExoticComponent<({ model, }: {
     model: {
         target: import("@jbrowse/core/configuration").AnyConfigurationModel;
     };
     session?: import("@jbrowse/core/util").AbstractSessionModel;
-}) => import("react").JSX.Element>;
+}) => import("react/jsx-runtime").JSX.Element>;
 export default class ConfigurationPlugin extends Plugin {
     name: string;
     install(pluginManager: PluginManager): void;

package/dist/index.js

@@ -15,13 +15,23 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
@@ -29,12 +39,12 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.ConfigurationEditor = void 0;
 const react_1 = require("react");
 const Plugin_1 = __importDefault(require("@jbrowse/core/Plugin"));
+const ConfigurationEditorWidget_1 = __importDefault(require("./ConfigurationEditorWidget"));
 const FromConfigAdapter_1 = __importDefault(require("./FromConfigAdapter"));
 const FromConfigRegionsAdapter_1 = __importDefault(require("./FromConfigRegionsAdapter"));
 const FromConfigSequenceAdapter_1 = __importDefault(require("./FromConfigSequenceAdapter"));
-const RefNameAliasAdapter_1 = __importDefault(require("./RefNameAliasAdapter"));
-const ConfigurationEditorWidget_1 = __importDefault(require("./ConfigurationEditorWidget"));
 const NcbiSequenceReportAliasAdapter_1 = __importDefault(require("./NcbiSequenceReportAliasAdapter"));
+const RefNameAliasAdapter_1 = __importDefault(require("./RefNameAliasAdapter"));
 const LazyConfigurationEditorComponent = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./ConfigurationEditorWidget/components/ConfigurationEditor'))));
 exports.ConfigurationEditor = LazyConfigurationEditorComponent;
 class ConfigurationPlugin extends Plugin_1.default {

package/esm/ConfigurationEditorWidget/components/BooleanEditor.d.ts

@@ -1,4 +1,3 @@
-import React from 'react';
 declare const BooleanEditor: ({ slot, }: {
     slot: {
         name: string;
@@ -6,5 +5,5 @@ declare const BooleanEditor: ({ slot, }: {
         set: (arg: boolean) => void;
         description: string;
     };
-}) => React.JSX.Element;
+}) => import("react/jsx-runtime").JSX.Element;
 export default BooleanEditor;

package/esm/ConfigurationEditorWidget/components/BooleanEditor.js

@@ -1,11 +1,9 @@
-import React from 'react';
-import { observer } from 'mobx-react';
+import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
 import { Checkbox, FormControl, FormControlLabel, FormHelperText, } from '@mui/material';
+import { observer } from 'mobx-react';
 const BooleanEditor = observer(function ({ slot, }) {
-    return (React.createElement(FormControl, null,
-        React.createElement(FormControlLabel, { label: slot.name, control: React.createElement(Checkbox, { checked: slot.value, onChange: evt => {
-                    slot.set(evt.target.checked);
-                } }) }),
-        React.createElement(FormHelperText, null, slot.description)));
+    return (_jsxs(FormControl, { children: [_jsx(FormControlLabel, { label: slot.name, control: _jsx(Checkbox, { checked: slot.value, onChange: evt => {
+                        slot.set(evt.target.checked);
+                    } }) }), _jsx(FormHelperText, { children: slot.description })] }));
 });
 export default BooleanEditor;

package/esm/ConfigurationEditorWidget/components/CallbackEditor.d.ts

@@ -1,4 +1,3 @@
-import React from 'react';
 declare const CallbackEditor: ({ slot, }: {
     slot: {
         set: (arg: string) => void;
@@ -7,5 +6,5 @@ declare const CallbackEditor: ({ slot, }: {
         value: string;
         contextVariable: string;
     };
-}) => React.JSX.Element;
+}) => import("react/jsx-runtime").JSX.Element;
 export default CallbackEditor;