@jbrowse/plugin-circular-view 2.2.1 → 2.3.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (66) hide show
  1. package/README.md +13 -4
  2. package/dist/BaseChordDisplay/components/BaseChordDisplay.d.ts +11 -3
  3. package/dist/BaseChordDisplay/components/BaseChordDisplay.js +4 -6
  4. package/dist/BaseChordDisplay/components/BaseChordDisplay.js.map +1 -1
  5. package/dist/BaseChordDisplay/components/DisplayError.js +1 -1
  6. package/dist/BaseChordDisplay/components/DisplayError.js.map +1 -1
  7. package/dist/BaseChordDisplay/components/Loading.js +1 -2
  8. package/dist/BaseChordDisplay/components/Loading.js.map +1 -1
  9. package/dist/BaseChordDisplay/models/BaseChordDisplayModel.d.ts +6 -5
  10. package/dist/BaseChordDisplay/models/BaseChordDisplayModel.js +198 -194
  11. package/dist/BaseChordDisplay/models/BaseChordDisplayModel.js.map +1 -1
  12. package/dist/BaseChordDisplay/models/renderReaction.d.ts +2 -0
  13. package/dist/BaseChordDisplay/models/renderReaction.js +12 -3
  14. package/dist/BaseChordDisplay/models/renderReaction.js.map +1 -1
  15. package/dist/CircularView/components/CircularView.js +2 -2
  16. package/dist/CircularView/components/CircularView.js.map +1 -1
  17. package/dist/CircularView/index.d.ts +3 -0
  18. package/dist/CircularView/index.js +40 -0
  19. package/dist/CircularView/index.js.map +1 -0
  20. package/dist/LaunchCircularView/index.d.ts +3 -0
  21. package/dist/LaunchCircularView/index.js +22 -0
  22. package/dist/LaunchCircularView/index.js.map +1 -0
  23. package/dist/index.d.ts +1 -1
  24. package/dist/index.js +7 -50
  25. package/dist/index.js.map +1 -1
  26. package/esm/BaseChordDisplay/components/BaseChordDisplay.d.ts +11 -3
  27. package/esm/BaseChordDisplay/components/BaseChordDisplay.js +4 -6
  28. package/esm/BaseChordDisplay/components/BaseChordDisplay.js.map +1 -1
  29. package/esm/BaseChordDisplay/components/DisplayError.js +1 -1
  30. package/esm/BaseChordDisplay/components/DisplayError.js.map +1 -1
  31. package/esm/BaseChordDisplay/components/Loading.js +1 -2
  32. package/esm/BaseChordDisplay/components/Loading.js.map +1 -1
  33. package/esm/BaseChordDisplay/models/BaseChordDisplayModel.d.ts +6 -5
  34. package/esm/BaseChordDisplay/models/BaseChordDisplayModel.js +199 -195
  35. package/esm/BaseChordDisplay/models/BaseChordDisplayModel.js.map +1 -1
  36. package/esm/BaseChordDisplay/models/renderReaction.d.ts +2 -0
  37. package/esm/BaseChordDisplay/models/renderReaction.js +9 -3
  38. package/esm/BaseChordDisplay/models/renderReaction.js.map +1 -1
  39. package/esm/CircularView/components/CircularView.js +2 -2
  40. package/esm/CircularView/components/CircularView.js.map +1 -1
  41. package/esm/CircularView/index.d.ts +3 -0
  42. package/esm/CircularView/index.js +12 -0
  43. package/esm/CircularView/index.js.map +1 -0
  44. package/esm/LaunchCircularView/index.d.ts +3 -0
  45. package/esm/LaunchCircularView/index.js +20 -0
  46. package/esm/LaunchCircularView/index.js.map +1 -0
  47. package/esm/index.d.ts +1 -1
  48. package/esm/index.js +6 -26
  49. package/esm/index.js.map +1 -1
  50. package/package.json +6 -5
  51. package/src/BaseChordDisplay/components/BaseChordDisplay.tsx +16 -6
  52. package/src/BaseChordDisplay/components/DisplayError.tsx +41 -43
  53. package/src/BaseChordDisplay/components/Loading.tsx +55 -58
  54. package/src/BaseChordDisplay/models/BaseChordDisplayModel.ts +241 -232
  55. package/src/BaseChordDisplay/models/renderReaction.ts +9 -3
  56. package/src/CircularView/components/CircularView.tsx +73 -75
  57. package/src/CircularView/index.ts +16 -0
  58. package/src/LaunchCircularView/index.ts +48 -0
  59. package/src/index.ts +10 -55
  60. package/dist/BaseChordDisplay/components/RpcRenderedSvgGroup.d.ts +0 -12
  61. package/dist/BaseChordDisplay/components/RpcRenderedSvgGroup.js +0 -73
  62. package/dist/BaseChordDisplay/components/RpcRenderedSvgGroup.js.map +0 -1
  63. package/esm/BaseChordDisplay/components/RpcRenderedSvgGroup.d.ts +0 -12
  64. package/esm/BaseChordDisplay/components/RpcRenderedSvgGroup.js +0 -48
  65. package/esm/BaseChordDisplay/components/RpcRenderedSvgGroup.js.map +0 -1
  66. package/src/BaseChordDisplay/components/RpcRenderedSvgGroup.tsx +0 -69
@@ -1,219 +1,223 @@
1
+ import clone from 'clone';
2
+ import { getParent, isAlive, types } from 'mobx-state-tree';
3
+ // jbrowse
1
4
  import { getConf } from '@jbrowse/core/configuration';
2
5
  import { BaseDisplay } from '@jbrowse/core/pluggableElementTypes/models';
3
6
  import CircularChordRendererType from '@jbrowse/core/pluggableElementTypes/renderers/CircularChordRendererType';
4
- import { getContainingView, getSession, getEnv, makeAbortableReaction, } from '@jbrowse/core/util';
5
- import { isFeature } from '@jbrowse/core/util/simpleFeature';
7
+ import { getContainingView, getSession, getEnv, isFeature, makeAbortableReaction, } from '@jbrowse/core/util';
6
8
  import { getParentRenderProps, getRpcSessionId, getTrackAssemblyNames, } from '@jbrowse/core/util/tracks';
7
- import { getParent, isAlive, types } from 'mobx-state-tree';
8
9
  // locals
9
10
  import { renderReactionData, renderReactionEffect } from './renderReaction';
10
11
  /**
11
12
  * #stateModel BaseChordDisplay
12
13
  * extends `BaseDisplay`
13
14
  */
14
- function stateModelFactory() {
15
- return types
16
- .compose('BaseChordDisplay', BaseDisplay, types.model({
17
- /**
18
- * #property
19
- */
20
- bezierRadiusRatio: 0.1,
15
+ function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
16
+ export const BaseChordDisplayModel = types
17
+ .compose('BaseChordDisplay', BaseDisplay, types.model({
18
+ /**
19
+ * #property
20
+ */
21
+ bezierRadiusRatio: 0.1,
22
+ /**
23
+ * #property
24
+ */
25
+ assemblyName: types.maybe(types.string),
26
+ }))
27
+ .volatile(() => {
28
+ return {
29
+ // NOTE: all this volatile stuff has to be filled in at once
30
+ // so that it stays consistent
31
+ filled: false,
32
+ reactElement: undefined,
33
+ data: undefined,
34
+ html: undefined,
35
+ message: '',
36
+ renderingComponent: undefined,
37
+ refNameMap: undefined,
38
+ };
39
+ })
40
+ .actions(self => {
41
+ const { pluginManager } = getEnv(self);
42
+ const track = self;
43
+ return {
21
44
  /**
22
- * #property
45
+ * #action
23
46
  */
24
- assemblyName: types.maybe(types.string),
25
- }))
26
- .volatile(() => {
47
+ onChordClick(feature) {
48
+ getConf(self, 'onChordClick', { feature, track, pluginManager });
49
+ },
50
+ };
51
+ })
52
+ .views(self => ({
53
+ /**
54
+ * #getter
55
+ */
56
+ get blockDefinitions() {
57
+ const origSlices = getContainingView(self)
58
+ .staticSlices;
59
+ if (!self.refNameMap) {
60
+ return origSlices;
61
+ }
62
+ const slices = clone(origSlices);
63
+ // eslint-disable-next-line @typescript-eslint/no-explicit-any
64
+ slices.forEach((slice) => {
65
+ const regions = slice.region.elided
66
+ ? slice.region.regions
67
+ : [slice.region];
68
+ regions.forEach((region) => {
69
+ var _a;
70
+ const renamed = (_a = self.refNameMap) === null || _a === void 0 ? void 0 : _a[region.refName];
71
+ if (renamed && region.refName !== renamed) {
72
+ region.refName = renamed;
73
+ }
74
+ });
75
+ });
76
+ return slices;
77
+ },
78
+ /**
79
+ * #method
80
+ */
81
+ renderProps() {
82
+ const view = getContainingView(self);
27
83
  return {
28
- // NOTE: all this volatile stuff has to be filled in at once
29
- // so that it stays consistent
30
- filled: false,
31
- reactElement: undefined,
32
- data: undefined,
33
- message: '',
34
- renderingComponent: undefined,
35
- refNameMap: undefined,
84
+ ...getParentRenderProps(self),
85
+ rpcDriverName: self.rpcDriverName,
86
+ displayModel: self,
87
+ bezierRadius: view.radiusPx * self.bezierRadiusRatio,
88
+ radius: view.radiusPx,
89
+ blockDefinitions: this.blockDefinitions,
90
+ onChordClick: self.onChordClick,
36
91
  };
37
- })
38
- .actions(self => {
92
+ },
93
+ /**
94
+ * #getter
95
+ * the pluggable element type object for this display's
96
+ * renderer
97
+ */
98
+ get rendererType() {
99
+ const display = self;
39
100
  const { pluginManager } = getEnv(self);
40
- const track = self;
41
- return {
42
- /**
43
- * #action
44
- */
45
- onChordClick(feature) {
46
- getConf(self, 'onChordClick', { feature, track, pluginManager });
47
- },
48
- };
49
- })
50
- .views(self => ({
51
- /**
52
- * #getter
53
- */
54
- get blockDefinitions() {
55
- const origSlices = getContainingView(self)
56
- .staticSlices;
57
- if (!self.refNameMap) {
58
- return origSlices;
59
- }
60
- const slices = JSON.parse(JSON.stringify(origSlices));
61
- // eslint-disable-next-line @typescript-eslint/no-explicit-any
62
- slices.forEach((slice) => {
63
- const regions = slice.region.elided
64
- ? slice.region.regions
65
- : [slice.region];
66
- regions.forEach((region) => {
67
- var _a;
68
- const renamed = (_a = self.refNameMap) === null || _a === void 0 ? void 0 : _a[region.refName];
69
- if (renamed && region.refName !== renamed) {
70
- region.refName = renamed;
71
- }
72
- });
73
- });
74
- return slices;
75
- },
76
- /**
77
- * #method
78
- */
79
- renderProps() {
80
- const view = getContainingView(self);
81
- return {
82
- ...getParentRenderProps(self),
83
- rpcDriverName: self.rpcDriverName,
84
- displayModel: self,
85
- bezierRadius: view.radiusPx * self.bezierRadiusRatio,
86
- radius: view.radiusPx,
87
- blockDefinitions: this.blockDefinitions,
88
- onChordClick: self.onChordClick,
89
- };
90
- },
91
- /**
92
- * #getter
93
- * the pluggable element type object for this diplay's
94
- * renderer
95
- */
96
- get rendererType() {
97
- const display = self;
98
- const { pluginManager } = getEnv(self);
99
- const ThisRendererType = pluginManager.getRendererType(self.rendererTypeName);
100
- if (!ThisRendererType) {
101
- throw new Error(`renderer "${display.rendererTypeName}" not found`);
102
- }
103
- if (!ThisRendererType.ReactComponent) {
104
- throw new Error(`renderer ${display.rendererTypeName} has no ReactComponent, it may not be completely implemented yet`);
105
- }
106
- return ThisRendererType;
107
- },
108
- /**
109
- * #method
110
- */
111
- isCompatibleWithRenderer(renderer) {
112
- return !!(renderer instanceof CircularChordRendererType);
113
- },
114
- /**
115
- * #getter
116
- * returns a string feature ID if the globally-selected object
117
- * is probably a feature
118
- */
119
- get selectedFeatureId() {
120
- if (!isAlive(self)) {
121
- return undefined;
122
- }
123
- const session = getSession(self);
124
- if (!session) {
125
- return undefined;
126
- }
127
- const { selection } = session;
128
- // does it quack like a feature?
129
- if (isFeature(selection)) {
130
- return selection.id();
131
- }
101
+ const ThisRendererType = pluginManager.getRendererType(self.rendererTypeName);
102
+ if (!ThisRendererType) {
103
+ throw new Error(`renderer "${display.rendererTypeName}" not found`);
104
+ }
105
+ if (!ThisRendererType.ReactComponent) {
106
+ throw new Error(`renderer ${display.rendererTypeName} has no ReactComponent, it may not be completely implemented yet`);
107
+ }
108
+ return ThisRendererType;
109
+ },
110
+ /**
111
+ * #method
112
+ */
113
+ isCompatibleWithRenderer(renderer) {
114
+ return !!(renderer instanceof CircularChordRendererType);
115
+ },
116
+ /**
117
+ * #getter
118
+ * returns a string feature ID if the globally-selected object
119
+ * is probably a feature
120
+ */
121
+ get selectedFeatureId() {
122
+ if (!isAlive(self)) {
132
123
  return undefined;
133
- },
134
- }))
135
- .actions(self => ({
136
- /**
137
- * #action
138
- */
139
- renderStarted() {
124
+ }
125
+ const session = getSession(self);
126
+ if (!session) {
127
+ return undefined;
128
+ }
129
+ const { selection } = session;
130
+ // does it quack like a feature?
131
+ if (isFeature(selection)) {
132
+ return selection.id();
133
+ }
134
+ return undefined;
135
+ },
136
+ }))
137
+ .actions(self => ({
138
+ /**
139
+ * #action
140
+ */
141
+ renderStarted() {
142
+ self.filled = false;
143
+ self.message = '';
144
+ self.reactElement = undefined;
145
+ self.data = undefined;
146
+ self.html = undefined;
147
+ self.error = undefined;
148
+ self.renderingComponent = undefined;
149
+ },
150
+ /**
151
+ * #action
152
+ */
153
+ renderSuccess({ message, data, reactElement, html, renderingComponent, }) {
154
+ if (message) {
140
155
  self.filled = false;
141
- self.message = '';
156
+ self.message = message;
142
157
  self.reactElement = undefined;
143
158
  self.data = undefined;
159
+ self.html = undefined;
144
160
  self.error = undefined;
145
161
  self.renderingComponent = undefined;
146
- },
147
- /**
148
- * #action
149
- */
150
- renderSuccess({ message, data, reactElement, renderingComponent, }) {
151
- if (message) {
152
- self.filled = false;
153
- self.message = message;
154
- self.reactElement = undefined;
155
- self.data = undefined;
156
- self.error = undefined;
157
- self.renderingComponent = undefined;
158
- }
159
- else {
160
- self.filled = true;
161
- self.message = '';
162
- self.reactElement = reactElement;
163
- self.data = data;
164
- self.error = undefined;
165
- self.renderingComponent = renderingComponent;
166
- }
167
- },
168
- /**
169
- * #action
170
- */
171
- renderError(error) {
172
- console.error(error);
173
- // the rendering failed for some reason
174
- self.filled = false;
162
+ }
163
+ else {
164
+ self.filled = true;
175
165
  self.message = '';
176
- self.reactElement = undefined;
177
- self.data = undefined;
178
- self.error = error;
179
- self.renderingComponent = undefined;
180
- },
181
- /**
182
- * #action
183
- */
184
- setRefNameMap(refNameMap) {
185
- self.refNameMap = refNameMap;
186
- },
187
- }))
188
- .actions(self => ({
189
- afterAttach() {
190
- makeAbortableReaction(self, renderReactionData,
191
- // @ts-ignore
192
- renderReactionEffect, {
193
- name: `${self.type} ${self.id} rendering`,
194
- // delay: self.renderDelay || 300,
195
- fireImmediately: true,
196
- }, self.renderStarted, self.renderSuccess, self.renderError);
197
- makeAbortableReaction(self, () => ({
198
- assemblyNames: getTrackAssemblyNames(self.parentTrack),
199
- // eslint-disable-next-line @typescript-eslint/no-explicit-any
200
- adapter: getConf(getParent(self, 2), 'adapter'),
201
- assemblyManager: getSession(self).assemblyManager,
202
- }),
166
+ self.reactElement = reactElement;
167
+ self.data = data;
168
+ self.html = html;
169
+ self.error = undefined;
170
+ self.renderingComponent = renderingComponent;
171
+ }
172
+ },
173
+ /**
174
+ * #action
175
+ */
176
+ renderError(error) {
177
+ console.error(error);
178
+ // the rendering failed for some reason
179
+ self.filled = false;
180
+ self.message = '';
181
+ self.reactElement = undefined;
182
+ self.html = undefined;
183
+ self.data = undefined;
184
+ self.error = error;
185
+ self.renderingComponent = undefined;
186
+ },
187
+ /**
188
+ * #action
189
+ */
190
+ setRefNameMap(refNameMap) {
191
+ self.refNameMap = refNameMap;
192
+ },
193
+ }))
194
+ .actions(self => ({
195
+ afterAttach() {
196
+ makeAbortableReaction(self, renderReactionData,
197
+ // @ts-ignore
198
+ renderReactionEffect, {
199
+ name: `${self.type} ${self.id} rendering`,
200
+ // delay: self.renderDelay || 300,
201
+ fireImmediately: true,
202
+ }, self.renderStarted, self.renderSuccess, self.renderError);
203
+ makeAbortableReaction(self, () => ({
204
+ assemblyNames: getTrackAssemblyNames(self.parentTrack),
203
205
  // eslint-disable-next-line @typescript-eslint/no-explicit-any
204
- async ({ assemblyNames, adapter, assemblyManager }, signal) => {
205
- return assemblyManager.getRefNameMapForAdapter(adapter, assemblyNames[0], { signal, sessionId: getRpcSessionId(self) });
206
- }, {
207
- name: `${self.type} ${self.id} getting refNames`,
208
- fireImmediately: true,
209
- }, () => { }, refNameMap => {
210
- self.setRefNameMap(refNameMap);
211
- }, error => {
212
- console.error(error);
213
- self.setError(error);
214
- });
215
- },
216
- }));
217
- }
218
- export const BaseChordDisplayModel = stateModelFactory();
206
+ adapter: getConf(getParent(self, 2), 'adapter'),
207
+ assemblyManager: getSession(self).assemblyManager,
208
+ }),
209
+ // eslint-disable-next-line @typescript-eslint/no-explicit-any
210
+ async ({ assemblyNames, adapter, assemblyManager }, signal) => {
211
+ return assemblyManager.getRefNameMapForAdapter(adapter, assemblyNames[0], { signal, sessionId: getRpcSessionId(self) });
212
+ }, {
213
+ name: `${self.type} ${self.id} getting refNames`,
214
+ fireImmediately: true,
215
+ }, () => { }, refNameMap => {
216
+ self.setRefNameMap(refNameMap);
217
+ }, error => {
218
+ console.error(error);
219
+ self.setError(error);
220
+ });
221
+ },
222
+ }));
219
223
  //# sourceMappingURL=BaseChordDisplayModel.js.map
@@ -1 +1 @@
1
- {"version":3,"file":"BaseChordDisplayModel.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/models/BaseChordDisplayModel.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,OAAO,EAAE,MAAM,6BAA6B,CAAA;AACrD,OAAO,EAAE,WAAW,EAAE,MAAM,4CAA4C,CAAA;AACxE,OAAO,yBAAyB,MAAM,yEAAyE,CAAA;AAE/G,OAAO,EACL,iBAAiB,EACjB,UAAU,EACV,MAAM,EACN,qBAAqB,GAEtB,MAAM,oBAAoB,CAAA;AAC3B,OAAO,EAAW,SAAS,EAAE,MAAM,kCAAkC,CAAA;AACrE,OAAO,EACL,oBAAoB,EACpB,eAAe,EACf,qBAAqB,GACtB,MAAM,2BAA2B,CAAA;AAElC,OAAO,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE,MAAM,iBAAiB,CAAA;AAE3D,SAAS;AACT,OAAO,EAAE,kBAAkB,EAAE,oBAAoB,EAAE,MAAM,kBAAkB,CAAA;AAG3E;;;GAGG;AACH,SAAS,iBAAiB;IACxB,OAAO,KAAK;SACT,OAAO,CACN,kBAAkB,EAClB,WAAW,EACX,KAAK,CAAC,KAAK,CAAC;QACV;;WAEG;QACH,iBAAiB,EAAE,GAAG;QACtB;;WAEG;QACH,YAAY,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,MAAM,CAAC;KACxC,CAAC,CACH;SACA,QAAQ,CAAC,GAAG,EAAE;QACb,OAAO;YACL,4DAA4D;YAC5D,8BAA8B;YAC9B,MAAM,EAAE,KAAK;YACb,YAAY,EAAE,SAA2C;YACzD,IAAI,EAAE,SAAS;YACf,OAAO,EAAE,EAAE;YACX,kBAAkB,EAAE,SAA8C;YAClE,UAAU,EAAE,SAA+C;SAC5D,CAAA;IACH,CAAC,CAAC;SACD,OAAO,CAAC,IAAI,CAAC,EAAE;QACd,MAAM,EAAE,aAAa,EAAE,GAAG,MAAM,CAAC,IAAI,CAAC,CAAA;QACtC,MAAM,KAAK,GAAG,IAAI,CAAA;QAClB,OAAO;YACL;;eAEG;YACH,YAAY,CAAC,OAAgB;gBAC3B,OAAO,CAAC,IAAI,EAAE,cAAc,EAAE,EAAE,OAAO,EAAE,KAAK,EAAE,aAAa,EAAE,CAAC,CAAA;YAClE,CAAC;SACF,CAAA;IACH,CAAC,CAAC;SACD,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACd;;WAEG;QACH,IAAI,gBAAgB;YAClB,MAAM,UAAU,GAAI,iBAAiB,CAAC,IAAI,CAAuB;iBAC9D,YAAY,CAAA;YACf,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE;gBACpB,OAAO,UAAU,CAAA;aAClB;YAED,MAAM,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,UAAU,CAAC,CAAC,CAAA;YAErD,8DAA8D;YAC9D,MAAM,CAAC,OAAO,CAAC,CAAC,KAAU,EAAE,EAAE;gBAC5B,MAAM,OAAO,GAAG,KAAK,CAAC,MAAM,CAAC,MAAM;oBACjC,CAAC,CAAC,KAAK,CAAC,MAAM,CAAC,OAAO;oBACtB,CAAC,CAAC,CAAC,KAAK,CAAC,MAAM,CAAC,CAAA;gBAClB,OAAO,CAAC,OAAO,CAAC,CAAC,MAAc,EAAE,EAAE;;oBACjC,MAAM,OAAO,GAAG,MAAA,IAAI,CAAC,UAAU,0CAAG,MAAM,CAAC,OAAO,CAAC,CAAA;oBACjD,IAAI,OAAO,IAAI,MAAM,CAAC,OAAO,KAAK,OAAO,EAAE;wBACzC,MAAM,CAAC,OAAO,GAAG,OAAO,CAAA;qBACzB;gBACH,CAAC,CAAC,CAAA;YACJ,CAAC,CAAC,CAAA;YACF,OAAO,MAAM,CAAA;QACf,CAAC;QAED;;WAEG;QACH,WAAW;YACT,MAAM,IAAI,GAAG,iBAAiB,CAAC,IAAI,CAAsB,CAAA;YACzD,OAAO;gBACL,GAAG,oBAAoB,CAAC,IAAI,CAAC;gBAC7B,aAAa,EAAE,IAAI,CAAC,aAAa;gBACjC,YAAY,EAAE,IAAI;gBAClB,YAAY,EAAE,IAAI,CAAC,QAAQ,GAAG,IAAI,CAAC,iBAAiB;gBACpD,MAAM,EAAE,IAAI,CAAC,QAAQ;gBACrB,gBAAgB,EAAE,IAAI,CAAC,gBAAgB;gBACvC,YAAY,EAAE,IAAI,CAAC,YAAY;aAChC,CAAA;QACH,CAAC;QAED;;;;WAIG;QACH,IAAI,YAAY;YACd,MAAM,OAAO,GAAG,IAAI,CAAA;YACpB,MAAM,EAAE,aAAa,EAAE,GAAG,MAAM,CAAC,IAAI,CAAC,CAAA;YACtC,MAAM,gBAAgB,GAAG,aAAa,CAAC,eAAe,CACpD,IAAI,CAAC,gBAAgB,CACtB,CAAA;YACD,IAAI,CAAC,gBAAgB,EAAE;gBACrB,MAAM,IAAI,KAAK,CAAC,aAAa,OAAO,CAAC,gBAAgB,aAAa,CAAC,CAAA;aACpE;YACD,IAAI,CAAC,gBAAgB,CAAC,cAAc,EAAE;gBACpC,MAAM,IAAI,KAAK,CACb,YAAY,OAAO,CAAC,gBAAgB,kEAAkE,CACvG,CAAA;aACF;YACD,OAAO,gBAAgB,CAAA;QACzB,CAAC;QAED;;WAEG;QACH,wBAAwB,CAAC,QAAsB;YAC7C,OAAO,CAAC,CAAC,CAAC,QAAQ,YAAY,yBAAyB,CAAC,CAAA;QAC1D,CAAC;QAED;;;;WAIG;QACH,IAAI,iBAAiB;YACnB,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE;gBAClB,OAAO,SAAS,CAAA;aACjB;YACD,MAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAA;YAChC,IAAI,CAAC,OAAO,EAAE;gBACZ,OAAO,SAAS,CAAA;aACjB;YACD,MAAM,EAAE,SAAS,EAAE,GAAG,OAAO,CAAA;YAC7B,gCAAgC;YAChC,IAAI,SAAS,CAAC,SAAS,CAAC,EAAE;gBACxB,OAAO,SAAS,CAAC,EAAE,EAAE,CAAA;aACtB;YACD,OAAO,SAAS,CAAA;QAClB,CAAC;KACF,CAAC,CAAC;SACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB;;WAEG;QACH,aAAa;YACX,IAAI,CAAC,MAAM,GAAG,KAAK,CAAA;YACnB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;YACjB,IAAI,CAAC,YAAY,GAAG,SAAS,CAAA;YAC7B,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;YACrB,IAAI,CAAC,KAAK,GAAG,SAAS,CAAA;YACtB,IAAI,CAAC,kBAAkB,GAAG,SAAS,CAAA;QACrC,CAAC;QACD;;WAEG;QACH,aAAa,CAAC,EACZ,OAAO,EACP,IAAI,EACJ,YAAY,EACZ,kBAAkB,GAOnB;YACC,IAAI,OAAO,EAAE;gBACX,IAAI,CAAC,MAAM,GAAG,KAAK,CAAA;gBACnB,IAAI,CAAC,OAAO,GAAG,OAAO,CAAA;gBACtB,IAAI,CAAC,YAAY,GAAG,SAAS,CAAA;gBAC7B,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;gBACrB,IAAI,CAAC,KAAK,GAAG,SAAS,CAAA;gBACtB,IAAI,CAAC,kBAAkB,GAAG,SAAS,CAAA;aACpC;iBAAM;gBACL,IAAI,CAAC,MAAM,GAAG,IAAI,CAAA;gBAClB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;gBACjB,IAAI,CAAC,YAAY,GAAG,YAAY,CAAA;gBAChC,IAAI,CAAC,IAAI,GAAG,IAAI,CAAA;gBAChB,IAAI,CAAC,KAAK,GAAG,SAAS,CAAA;gBACtB,IAAI,CAAC,kBAAkB,GAAG,kBAAkB,CAAA;aAC7C;QACH,CAAC;QACD;;WAEG;QACH,WAAW,CAAC,KAAc;YACxB,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAA;YACpB,uCAAuC;YACvC,IAAI,CAAC,MAAM,GAAG,KAAK,CAAA;YACnB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;YACjB,IAAI,CAAC,YAAY,GAAG,SAAS,CAAA;YAC7B,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;YACrB,IAAI,CAAC,KAAK,GAAG,KAAK,CAAA;YAClB,IAAI,CAAC,kBAAkB,GAAG,SAAS,CAAA;QACrC,CAAC;QAED;;WAEG;QACH,aAAa,CAAC,UAAkC;YAC9C,IAAI,CAAC,UAAU,GAAG,UAAU,CAAA;QAC9B,CAAC;KACF,CAAC,CAAC;SACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB,WAAW;YACT,qBAAqB,CACnB,IAAI,EACJ,kBAAkB;YAElB,aAAa;YACb,oBAAoB,EACpB;gBACE,IAAI,EAAE,GAAG,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,EAAE,YAAY;gBACzC,kCAAkC;gBAClC,eAAe,EAAE,IAAI;aACtB,EACD,IAAI,CAAC,aAAa,EAClB,IAAI,CAAC,aAAa,EAClB,IAAI,CAAC,WAAW,CACjB,CAAA;YACD,qBAAqB,CACnB,IAAI,EACJ,GAAG,EAAE,CAAC,CAAC;gBACL,aAAa,EAAE,qBAAqB,CAAC,IAAI,CAAC,WAAW,CAAa;gBAClE,8DAA8D;gBAC9D,OAAO,EAAE,OAAO,CAAC,SAAS,CAAM,IAAI,EAAE,CAAC,CAAC,EAAE,SAAS,CAAC;gBACpD,eAAe,EAAE,UAAU,CAAC,IAAI,CAAC,CAAC,eAAe;aAClD,CAAC;YACF,8DAA8D;YAC9D,KAAK,EAAE,EAAE,aAAa,EAAE,OAAO,EAAE,eAAe,EAAO,EAAE,MAAM,EAAE,EAAE;gBACjE,OAAO,eAAe,CAAC,uBAAuB,CAC5C,OAAO,EACP,aAAa,CAAC,CAAC,CAAC,EAChB,EAAE,MAAM,EAAE,SAAS,EAAE,eAAe,CAAC,IAAI,CAAC,EAAE,CAC7C,CAAA;YACH,CAAC,EACD;gBACE,IAAI,EAAE,GAAG,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,EAAE,mBAAmB;gBAChD,eAAe,EAAE,IAAI;aACtB,EACD,GAAG,EAAE,GAAE,CAAC,EACR,UAAU,CAAC,EAAE;gBACX,IAAI,CAAC,aAAa,CAAC,UAAU,CAAC,CAAA;YAChC,CAAC,EACD,KAAK,CAAC,EAAE;gBACN,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAA;gBACpB,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAA;YACtB,CAAC,CACF,CAAA;QACH,CAAC;KACF,CAAC,CAAC,CAAA;AACP,CAAC;AAED,MAAM,CAAC,MAAM,qBAAqB,GAAG,iBAAiB,EAAE,CAAA"}
1
+ {"version":3,"file":"BaseChordDisplayModel.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/models/BaseChordDisplayModel.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE,MAAM,iBAAiB,CAAA;AAE3D,UAAU;AACV,OAAO,EAAE,OAAO,EAAE,MAAM,6BAA6B,CAAA;AACrD,OAAO,EAAE,WAAW,EAAE,MAAM,4CAA4C,CAAA;AACxE,OAAO,yBAAyB,MAAM,yEAAyE,CAAA;AAE/G,OAAO,EACL,iBAAiB,EACjB,UAAU,EACV,MAAM,EACN,SAAS,EACT,qBAAqB,GAItB,MAAM,oBAAoB,CAAA;AAC3B,OAAO,EACL,oBAAoB,EACpB,eAAe,EACf,qBAAqB,GACtB,MAAM,2BAA2B,CAAA;AAElC,SAAS;AACT,OAAO,EAAE,kBAAkB,EAAE,oBAAoB,EAAE,MAAM,kBAAkB,CAAA;AAG3E;;;GAGG;AACH,SAAS,CAAC,KAAI,CAAC,CAAC,wDAAwD;AAExE,MAAM,CAAC,MAAM,qBAAqB,GAAG,KAAK;KACvC,OAAO,CACN,kBAAkB,EAClB,WAAW,EACX,KAAK,CAAC,KAAK,CAAC;IACV;;OAEG;IACH,iBAAiB,EAAE,GAAG;IACtB;;OAEG;IACH,YAAY,EAAE,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,MAAM,CAAC;CACxC,CAAC,CACH;KACA,QAAQ,CAAC,GAAG,EAAE;IACb,OAAO;QACL,4DAA4D;QAC5D,8BAA8B;QAC9B,MAAM,EAAE,KAAK;QACb,YAAY,EAAE,SAA2C;QACzD,IAAI,EAAE,SAAS;QACf,IAAI,EAAE,SAA+B;QACrC,OAAO,EAAE,EAAE;QACX,kBAAkB,EAAE,SAA8C;QAClE,UAAU,EAAE,SAA+C;KAC5D,CAAA;AACH,CAAC,CAAC;KACD,OAAO,CAAC,IAAI,CAAC,EAAE;IACd,MAAM,EAAE,aAAa,EAAE,GAAG,MAAM,CAAC,IAAI,CAAC,CAAA;IACtC,MAAM,KAAK,GAAG,IAAI,CAAA;IAClB,OAAO;QACL;;WAEG;QACH,YAAY,CAAC,OAAgB;YAC3B,OAAO,CAAC,IAAI,EAAE,cAAc,EAAE,EAAE,OAAO,EAAE,KAAK,EAAE,aAAa,EAAE,CAAC,CAAA;QAClE,CAAC;KACF,CAAA;AACH,CAAC,CAAC;KACD,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACd;;OAEG;IACH,IAAI,gBAAgB;QAClB,MAAM,UAAU,GAAI,iBAAiB,CAAC,IAAI,CAAuB;aAC9D,YAAY,CAAA;QACf,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE;YACpB,OAAO,UAAU,CAAA;SAClB;QAED,MAAM,MAAM,GAAG,KAAK,CAAC,UAAU,CAAC,CAAA;QAEhC,8DAA8D;QAC9D,MAAM,CAAC,OAAO,CAAC,CAAC,KAAU,EAAE,EAAE;YAC5B,MAAM,OAAO,GAAG,KAAK,CAAC,MAAM,CAAC,MAAM;gBACjC,CAAC,CAAC,KAAK,CAAC,MAAM,CAAC,OAAO;gBACtB,CAAC,CAAC,CAAC,KAAK,CAAC,MAAM,CAAC,CAAA;YAClB,OAAO,CAAC,OAAO,CAAC,CAAC,MAAc,EAAE,EAAE;;gBACjC,MAAM,OAAO,GAAG,MAAA,IAAI,CAAC,UAAU,0CAAG,MAAM,CAAC,OAAO,CAAC,CAAA;gBACjD,IAAI,OAAO,IAAI,MAAM,CAAC,OAAO,KAAK,OAAO,EAAE;oBACzC,MAAM,CAAC,OAAO,GAAG,OAAO,CAAA;iBACzB;YACH,CAAC,CAAC,CAAA;QACJ,CAAC,CAAC,CAAA;QACF,OAAO,MAAM,CAAA;IACf,CAAC;IAED;;OAEG;IACH,WAAW;QACT,MAAM,IAAI,GAAG,iBAAiB,CAAC,IAAI,CAAsB,CAAA;QACzD,OAAO;YACL,GAAG,oBAAoB,CAAC,IAAI,CAAC;YAC7B,aAAa,EAAE,IAAI,CAAC,aAAa;YACjC,YAAY,EAAE,IAAI;YAClB,YAAY,EAAE,IAAI,CAAC,QAAQ,GAAG,IAAI,CAAC,iBAAiB;YACpD,MAAM,EAAE,IAAI,CAAC,QAAQ;YACrB,gBAAgB,EAAE,IAAI,CAAC,gBAAgB;YACvC,YAAY,EAAE,IAAI,CAAC,YAAY;SAChC,CAAA;IACH,CAAC;IAED;;;;OAIG;IACH,IAAI,YAAY;QACd,MAAM,OAAO,GAAG,IAAI,CAAA;QACpB,MAAM,EAAE,aAAa,EAAE,GAAG,MAAM,CAAC,IAAI,CAAC,CAAA;QACtC,MAAM,gBAAgB,GAAG,aAAa,CAAC,eAAe,CACpD,IAAI,CAAC,gBAAgB,CACtB,CAAA;QACD,IAAI,CAAC,gBAAgB,EAAE;YACrB,MAAM,IAAI,KAAK,CAAC,aAAa,OAAO,CAAC,gBAAgB,aAAa,CAAC,CAAA;SACpE;QACD,IAAI,CAAC,gBAAgB,CAAC,cAAc,EAAE;YACpC,MAAM,IAAI,KAAK,CACb,YAAY,OAAO,CAAC,gBAAgB,kEAAkE,CACvG,CAAA;SACF;QACD,OAAO,gBAAgB,CAAA;IACzB,CAAC;IAED;;OAEG;IACH,wBAAwB,CAAC,QAAsB;QAC7C,OAAO,CAAC,CAAC,CAAC,QAAQ,YAAY,yBAAyB,CAAC,CAAA;IAC1D,CAAC;IAED;;;;OAIG;IACH,IAAI,iBAAiB;QACnB,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE;YAClB,OAAO,SAAS,CAAA;SACjB;QACD,MAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAA;QAChC,IAAI,CAAC,OAAO,EAAE;YACZ,OAAO,SAAS,CAAA;SACjB;QACD,MAAM,EAAE,SAAS,EAAE,GAAG,OAAO,CAAA;QAC7B,gCAAgC;QAChC,IAAI,SAAS,CAAC,SAAS,CAAC,EAAE;YACxB,OAAO,SAAS,CAAC,EAAE,EAAE,CAAA;SACtB;QACD,OAAO,SAAS,CAAA;IAClB,CAAC;CACF,CAAC,CAAC;KACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB;;OAEG;IACH,aAAa;QACX,IAAI,CAAC,MAAM,GAAG,KAAK,CAAA;QACnB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;QACjB,IAAI,CAAC,YAAY,GAAG,SAAS,CAAA;QAC7B,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;QACrB,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;QACrB,IAAI,CAAC,KAAK,GAAG,SAAS,CAAA;QACtB,IAAI,CAAC,kBAAkB,GAAG,SAAS,CAAA;IACrC,CAAC;IACD;;OAEG;IACH,aAAa,CAAC,EACZ,OAAO,EACP,IAAI,EACJ,YAAY,EACZ,IAAI,EACJ,kBAAkB,GAQnB;QACC,IAAI,OAAO,EAAE;YACX,IAAI,CAAC,MAAM,GAAG,KAAK,CAAA;YACnB,IAAI,CAAC,OAAO,GAAG,OAAO,CAAA;YACtB,IAAI,CAAC,YAAY,GAAG,SAAS,CAAA;YAC7B,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;YACrB,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;YACrB,IAAI,CAAC,KAAK,GAAG,SAAS,CAAA;YACtB,IAAI,CAAC,kBAAkB,GAAG,SAAS,CAAA;SACpC;aAAM;YACL,IAAI,CAAC,MAAM,GAAG,IAAI,CAAA;YAClB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;YACjB,IAAI,CAAC,YAAY,GAAG,YAAY,CAAA;YAChC,IAAI,CAAC,IAAI,GAAG,IAAI,CAAA;YAChB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAA;YAChB,IAAI,CAAC,KAAK,GAAG,SAAS,CAAA;YACtB,IAAI,CAAC,kBAAkB,GAAG,kBAAkB,CAAA;SAC7C;IACH,CAAC;IACD;;OAEG;IACH,WAAW,CAAC,KAAc;QACxB,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAA;QACpB,uCAAuC;QACvC,IAAI,CAAC,MAAM,GAAG,KAAK,CAAA;QACnB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;QACjB,IAAI,CAAC,YAAY,GAAG,SAAS,CAAA;QAC7B,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;QACrB,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;QACrB,IAAI,CAAC,KAAK,GAAG,KAAK,CAAA;QAClB,IAAI,CAAC,kBAAkB,GAAG,SAAS,CAAA;IACrC,CAAC;IAED;;OAEG;IACH,aAAa,CAAC,UAAkC;QAC9C,IAAI,CAAC,UAAU,GAAG,UAAU,CAAA;IAC9B,CAAC;CACF,CAAC,CAAC;KACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,WAAW;QACT,qBAAqB,CACnB,IAAI,EACJ,kBAAkB;QAElB,aAAa;QACb,oBAAoB,EACpB;YACE,IAAI,EAAE,GAAG,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,EAAE,YAAY;YACzC,kCAAkC;YAClC,eAAe,EAAE,IAAI;SACtB,EACD,IAAI,CAAC,aAAa,EAClB,IAAI,CAAC,aAAa,EAClB,IAAI,CAAC,WAAW,CACjB,CAAA;QACD,qBAAqB,CACnB,IAAI,EACJ,GAAG,EAAE,CAAC,CAAC;YACL,aAAa,EAAE,qBAAqB,CAAC,IAAI,CAAC,WAAW,CAAa;YAClE,8DAA8D;YAC9D,OAAO,EAAE,OAAO,CAAC,SAAS,CAAM,IAAI,EAAE,CAAC,CAAC,EAAE,SAAS,CAAC;YACpD,eAAe,EAAE,UAAU,CAAC,IAAI,CAAC,CAAC,eAAe;SAClD,CAAC;QACF,8DAA8D;QAC9D,KAAK,EAAE,EAAE,aAAa,EAAE,OAAO,EAAE,eAAe,EAAO,EAAE,MAAM,EAAE,EAAE;YACjE,OAAO,eAAe,CAAC,uBAAuB,CAC5C,OAAO,EACP,aAAa,CAAC,CAAC,CAAC,EAChB,EAAE,MAAM,EAAE,SAAS,EAAE,eAAe,CAAC,IAAI,CAAC,EAAE,CAC7C,CAAA;QACH,CAAC,EACD;YACE,IAAI,EAAE,GAAG,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,EAAE,mBAAmB;YAChD,eAAe,EAAE,IAAI;SACtB,EACD,GAAG,EAAE,GAAE,CAAC,EACR,UAAU,CAAC,EAAE;YACX,IAAI,CAAC,aAAa,CAAC,UAAU,CAAC,CAAA;QAChC,CAAC,EACD,KAAK,CAAC,EAAE;YACN,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAA;YACpB,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAA;QACtB,CAAC,CACF,CAAA;IACH,CAAC;CACF,CAAC,CAAC,CAAA"}
@@ -16,10 +16,12 @@ export declare function renderReactionEffect(props: any, signal: AbortSignal, se
16
16
  message: any;
17
17
  html?: undefined;
18
18
  data?: undefined;
19
+ reactElement?: undefined;
19
20
  renderingComponent?: undefined;
20
21
  } | {
21
22
  html: any;
22
23
  data: any;
24
+ reactElement: any;
23
25
  renderingComponent: any;
24
26
  message?: undefined;
25
27
  }>;
@@ -1,3 +1,4 @@
1
+ import clone from 'clone';
1
2
  import { getRpcSessionId } from '@jbrowse/core/util/tracks';
2
3
  import { getSession, getContainingView } from '@jbrowse/core/util';
3
4
  // eslint-disable-next-line @typescript-eslint/no-explicit-any
@@ -12,9 +13,9 @@ export function renderReactionData(self) {
12
13
  renderProps: self.renderProps(),
13
14
  renderArgs: {
14
15
  assemblyName: (_a = view.displayedRegions[0]) === null || _a === void 0 ? void 0 : _a.assemblyName,
15
- adapterConfig: JSON.parse(JSON.stringify(self.adapterConfig)),
16
+ adapterConfig: clone(self.adapterConfig),
16
17
  rendererType: rendererType.name,
17
- regions: JSON.parse(JSON.stringify(view.displayedRegions)),
18
+ regions: clone(view.displayedRegions),
18
19
  blockDefinitions: self.blockDefinitions,
19
20
  sessionId: getRpcSessionId(self),
20
21
  timeout: 1000000,
@@ -48,6 +49,11 @@ self) {
48
49
  ...renderProps,
49
50
  signal,
50
51
  });
51
- return { html, data, renderingComponent: rendererType.ReactComponent };
52
+ return {
53
+ html,
54
+ data,
55
+ reactElement: data.reactElement,
56
+ renderingComponent: rendererType.ReactComponent,
57
+ };
52
58
  }
53
59
  //# sourceMappingURL=renderReaction.js.map
@@ -1 +1 @@
1
- {"version":3,"file":"renderReaction.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/models/renderReaction.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,eAAe,EAAE,MAAM,2BAA2B,CAAA;AAC3D,OAAO,EAAE,UAAU,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAA;AAElE,8DAA8D;AAC9D,MAAM,UAAU,kBAAkB,CAAC,IAAS;;IAC1C,MAAM,IAAI,GAAG,iBAAiB,CAAC,IAAI,CAAC,CAAA;IACpC,MAAM,EAAE,YAAY,EAAE,GAAG,IAAI,CAAA;IAC7B,MAAM,EAAE,UAAU,EAAE,GAAG,UAAU,CAAC,IAAI,CAAC,CAAA;IAEvC,OAAO;QACL,YAAY;QACZ,UAAU;QACV,WAAW,EAAE,IAAI,CAAC,WAAW,EAAE;QAC/B,UAAU,EAAE;YACV,YAAY,EAAE,MAAA,IAAI,CAAC,gBAAgB,CAAC,CAAC,CAAC,0CAAE,YAAY;YACpD,aAAa,EAAE,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAC7D,YAAY,EAAE,YAAY,CAAC,IAAI;YAC/B,OAAO,EAAE,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,gBAAgB,CAAC,CAAC;YAC1D,gBAAgB,EAAE,IAAI,CAAC,gBAAgB;YACvC,SAAS,EAAE,eAAe,CAAC,IAAI,CAAC;YAChC,OAAO,EAAE,OAAO;SACjB;KACF,CAAA;AACH,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,oBAAoB;AACxC,8DAA8D;AAC9D,KAAU,EACV,MAAmB;AACnB,8DAA8D;AAC9D,IAAS;IAET,IAAI,CAAC,KAAK,EAAE;QACV,MAAM,IAAI,KAAK,CAAC,6BAA6B,CAAC,CAAA;KAC/C;IAED,MAAM,EACJ,YAAY,EACZ,UAAU,EACV,sBAAsB,EACtB,UAAU,EACV,WAAW,GACZ,GAAG,KAAK,CAAA;IAET,IAAI,sBAAsB,EAAE;QAC1B,OAAO,EAAE,OAAO,EAAE,sBAAsB,EAAE,CAAA;KAC3C;IAED,oDAAoD;IACpD,IACE,CAAC,KAAK,CAAC,WAAW,CAAC,MAAM;QACzB,CAAC,KAAK,CAAC,UAAU,CAAC,OAAO;QACzB,CAAC,KAAK,CAAC,UAAU,CAAC,OAAO,CAAC,MAAM,EAChC;QACA,OAAO,EAAE,OAAO,EAAE,iBAAiB,EAAE,CAAA;KACtC;IAED,mCAAmC;IACnC,IAAI,CAAC,IAAI,CAAC,wBAAwB,CAAC,YAAY,CAAC,EAAE;QAChD,MAAM,IAAI,KAAK,CACb,YAAY,YAAY,CAAC,IAAI,2CAA2C,CACzE,CAAA;KACF;IAED,MAAM,EAAE,IAAI,EAAE,GAAG,IAAI,EAAE,GAAG,MAAM,YAAY,CAAC,cAAc,CAAC,UAAU,EAAE;QACtE,GAAG,UAAU;QACb,GAAG,WAAW;QACd,MAAM;KACP,CAAC,CAAA;IAEF,OAAO,EAAE,IAAI,EAAE,IAAI,EAAE,kBAAkB,EAAE,YAAY,CAAC,cAAc,EAAE,CAAA;AACxE,CAAC"}
1
+ {"version":3,"file":"renderReaction.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/models/renderReaction.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,eAAe,EAAE,MAAM,2BAA2B,CAAA;AAC3D,OAAO,EAAE,UAAU,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAA;AAElE,8DAA8D;AAC9D,MAAM,UAAU,kBAAkB,CAAC,IAAS;;IAC1C,MAAM,IAAI,GAAG,iBAAiB,CAAC,IAAI,CAAC,CAAA;IACpC,MAAM,EAAE,YAAY,EAAE,GAAG,IAAI,CAAA;IAC7B,MAAM,EAAE,UAAU,EAAE,GAAG,UAAU,CAAC,IAAI,CAAC,CAAA;IAEvC,OAAO;QACL,YAAY;QACZ,UAAU;QACV,WAAW,EAAE,IAAI,CAAC,WAAW,EAAE;QAC/B,UAAU,EAAE;YACV,YAAY,EAAE,MAAA,IAAI,CAAC,gBAAgB,CAAC,CAAC,CAAC,0CAAE,YAAY;YACpD,aAAa,EAAE,KAAK,CAAC,IAAI,CAAC,aAAa,CAAC;YACxC,YAAY,EAAE,YAAY,CAAC,IAAI;YAC/B,OAAO,EAAE,KAAK,CAAC,IAAI,CAAC,gBAAgB,CAAC;YACrC,gBAAgB,EAAE,IAAI,CAAC,gBAAgB;YACvC,SAAS,EAAE,eAAe,CAAC,IAAI,CAAC;YAChC,OAAO,EAAE,OAAO;SACjB;KACF,CAAA;AACH,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,oBAAoB;AACxC,8DAA8D;AAC9D,KAAU,EACV,MAAmB;AACnB,8DAA8D;AAC9D,IAAS;IAET,IAAI,CAAC,KAAK,EAAE;QACV,MAAM,IAAI,KAAK,CAAC,6BAA6B,CAAC,CAAA;KAC/C;IAED,MAAM,EACJ,YAAY,EACZ,UAAU,EACV,sBAAsB,EACtB,UAAU,EACV,WAAW,GACZ,GAAG,KAAK,CAAA;IAET,IAAI,sBAAsB,EAAE;QAC1B,OAAO,EAAE,OAAO,EAAE,sBAAsB,EAAE,CAAA;KAC3C;IAED,oDAAoD;IACpD,IACE,CAAC,KAAK,CAAC,WAAW,CAAC,MAAM;QACzB,CAAC,KAAK,CAAC,UAAU,CAAC,OAAO;QACzB,CAAC,KAAK,CAAC,UAAU,CAAC,OAAO,CAAC,MAAM,EAChC;QACA,OAAO,EAAE,OAAO,EAAE,iBAAiB,EAAE,CAAA;KACtC;IAED,mCAAmC;IACnC,IAAI,CAAC,IAAI,CAAC,wBAAwB,CAAC,YAAY,CAAC,EAAE;QAChD,MAAM,IAAI,KAAK,CACb,YAAY,YAAY,CAAC,IAAI,2CAA2C,CACzE,CAAA;KACF;IAED,MAAM,EAAE,IAAI,EAAE,GAAG,IAAI,EAAE,GAAG,MAAM,YAAY,CAAC,cAAc,CAAC,UAAU,EAAE;QACtE,GAAG,UAAU;QACb,GAAG,WAAW;QACd,MAAM;KACP,CAAC,CAAA;IAEF,OAAO;QACL,IAAI;QACJ,IAAI;QACJ,YAAY,EAAE,IAAI,CAAC,YAAY;QAC/B,kBAAkB,EAAE,YAAY,CAAC,cAAc;KAChD,CAAA;AACH,CAAC"}
@@ -1,8 +1,8 @@
1
1
  import React from 'react';
2
2
  import { observer } from 'mobx-react';
3
+ import { IconButton } from '@mui/material';
3
4
  import { ResizeHandle, ErrorMessage } from '@jbrowse/core/ui';
4
5
  import { assembleLocString } from '@jbrowse/core/util';
5
- import { IconButton } from '@mui/material';
6
6
  import { makeStyles } from 'tss-react/mui';
7
7
  import { grey } from '@mui/material/colors';
8
8
  // icons
@@ -62,7 +62,7 @@ const Slices = observer(({ model }) => {
62
62
  return (React.createElement(display.RenderingComponent, { key: display.id, display: display, view: model }));
63
63
  })));
64
64
  });
65
- const Controls = observer(({ model, showingFigure, }) => {
65
+ const Controls = observer(function ({ model, showingFigure, }) {
66
66
  const { classes } = useStyles();
67
67
  return (React.createElement("div", { className: classes.controls },
68
68
  React.createElement(IconButton, { onClick: model.zoomOutButton, className: classes.iconButton, title: model.lockedFitToWindow ? 'unlock to zoom out' : 'zoom out', disabled: !showingFigure || model.atMaxBpPerPx || model.lockedFitToWindow, color: "secondary" },
@@ -1 +1 @@
1
- {"version":3,"file":"CircularView.js","sourceRoot":"","sources":["../../../src/CircularView/components/CircularView.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,YAAY,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAA;AAC7D,OAAO,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAA;AAEtD,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,IAAI,EAAE,MAAM,sBAAsB,CAAA;AAE3C,QAAQ;AACR,OAAO,WAAW,MAAM,6BAA6B,CAAA;AACrD,OAAO,UAAU,MAAM,4BAA4B,CAAA;AACnD,OAAO,cAAc,MAAM,gCAAgC,CAAA;AAC3D,OAAO,eAAe,MAAM,iCAAiC,CAAA;AAC7D,OAAO,YAAY,MAAM,8BAA8B,CAAA;AACvD,OAAO,QAAQ,MAAM,0BAA0B,CAAA;AAC/C,OAAO,EAAE,aAAa,IAAI,iBAAiB,EAAE,MAAM,wBAAwB,CAAA;AAE3E,SAAS;AACT,OAAO,KAAK,MAAM,SAAS,CAAA;AAC3B,OAAO,UAAU,MAAM,cAAc,CAAA;AAErC,MAAM,gBAAgB,GAAG,CAAC,CAAA;AAE1B,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,IAAI,EAAE;QACJ,QAAQ,EAAE,UAAU;QACpB,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAC9B,QAAQ,EAAE,QAAQ;QAClB,UAAU,EAAE,OAAO;KACpB;IACD,QAAQ,EAAE;QACR,QAAQ,EAAE,MAAM;KACjB;IACD,SAAS,EAAE;QACT,UAAU,EAAE,MAAM;QAClB,8CAA8C;QAC9C,SAAS,EAAE,aAAa;QACxB,OAAO,EAAE,OAAO;KACjB;IACD,UAAU,EAAE;QACV,OAAO,EAAE,KAAK;QACd,MAAM,EAAE,aAAa;KACtB;IACD,QAAQ,EAAE;QACR,QAAQ,EAAE,QAAQ;QAClB,UAAU,EAAE,QAAQ;QACpB,QAAQ,EAAE,UAAU;QACpB,UAAU,EAAE,IAAI,CAAC,GAAG,CAAC;QACrB,SAAS,EAAE,YAAY;QACvB,WAAW,EAAE,mBAAmB;QAChC,YAAY,EAAE,mBAAmB;QACjC,IAAI,EAAE,CAAC;QACP,GAAG,EAAE,CAAC;KACP;IACD,mBAAmB,EAAE;QACnB,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC/B;CACF,CAAC,CAAC,CAAA;AAEH,MAAM,MAAM,GAAG,QAAQ,CAAC,CAAC,EAAE,KAAK,EAAgC,EAAE,EAAE;IAClE,OAAO,CACL;QACG,KAAK,CAAC,YAAY,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,CAC/B,oBAAC,KAAK,IACJ,GAAG,EAAE,iBAAiB;YACpB,aAAa;YACb,KAAK,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,KAAK,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,MAAM,CAC7D,EACD,KAAK,EAAE,KAAK,EACZ,KAAK,EAAE,KAAK,GACZ,CACH,CAAC;QACD,KAAK,CAAC,MAAM,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;YACxB,MAAM,OAAO,GAAG,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAA;YACjC,OAAO,CACL,oBAAC,OAAO,CAAC,kBAAkB,IACzB,GAAG,EAAE,OAAO,CAAC,EAAE,EACf,OAAO,EAAE,OAAO,EAChB,IAAI,EAAE,KAAK,GACX,CACH,CAAA;QACH,CAAC,CAAC,CACD,CACJ,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,QAAQ,GAAG,QAAQ,CACvB,CAAC,EACC,KAAK,EACL,aAAa,GAId,EAAE,EAAE;IACH,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,OAAO,CACL,6BAAK,SAAS,EAAE,OAAO,CAAC,QAAQ;QAC9B,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,aAAa,EAC5B,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,KAAK,EAAE,KAAK,CAAC,iBAAiB,CAAC,CAAC,CAAC,oBAAoB,CAAC,CAAC,CAAC,UAAU,EAClE,QAAQ,EACN,CAAC,aAAa,IAAI,KAAK,CAAC,YAAY,IAAI,KAAK,CAAC,iBAAiB,EAEjE,KAAK,EAAC,WAAW;YAEjB,oBAAC,WAAW,OAAG,CACJ;QAEb,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,YAAY,EAC3B,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,KAAK,EAAC,SAAS,EACf,QAAQ,EAAE,CAAC,aAAa,IAAI,KAAK,CAAC,YAAY,EAC9C,KAAK,EAAC,WAAW;YAEjB,oBAAC,UAAU,OAAG,CACH;QAEb,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,4BAA4B,EAC3C,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,KAAK,EAAC,0BAA0B,EAChC,QAAQ,EAAE,CAAC,aAAa,EACxB,KAAK,EAAC,WAAW;YAEjB,oBAAC,cAAc,OAAG,CACP;QAEb,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,qBAAqB,EACpC,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,KAAK,EAAC,kBAAkB,EACxB,QAAQ,EAAE,CAAC,aAAa,EACxB,KAAK,EAAC,WAAW;YAEjB,oBAAC,eAAe,OAAG,CACR;QAEb,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,qBAAqB,EACpC,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,KAAK,EACH,KAAK,CAAC,iBAAiB;gBACrB,CAAC,CAAC,6BAA6B;gBAC/B,CAAC,CAAC,gCAAgC,EAEtC,QAAQ,EAAE,KAAK,CAAC,cAAc,EAC9B,KAAK,EAAC,WAAW,IAEhB,KAAK,CAAC,iBAAiB,CAAC,CAAC,CAAC,oBAAC,QAAQ,OAAG,CAAC,CAAC,CAAC,oBAAC,YAAY,OAAG,CAC/C;QAEZ,KAAK,CAAC,uBAAuB,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CACtC,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,qBAAqB,EACpC,KAAK,EAAC,qBAAqB,iBACf,uBAAuB,EACnC,KAAK,EAAC,WAAW;YAEjB,oBAAC,iBAAiB,OAAG,CACV,CACd,CACG,CACP,CAAA;AACH,CAAC,CACF,CAAA;AAED,MAAM,YAAY,GAAG,QAAQ,CAAC,CAAC,EAAE,KAAK,EAAgC,EAAE,EAAE;IACxE,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,WAAW,GACf,CAAC,CAAC,KAAK,CAAC,gBAAgB,CAAC,MAAM;QAC/B,CAAC,CAAC,KAAK,CAAC,WAAW;QACnB,CAAC,CAAC,KAAK,CAAC,YAAY,CAAA;IAEtB,MAAM,cAAc,GAAG,CAAC,WAAW,IAAI,CAAC,KAAK,CAAC,iBAAiB,CAAA;IAC/D,MAAM,UAAU,GAAG,WAAW,IAAI,CAAC,cAAc,CAAA;IAEjD,OAAO,CACL,6BACE,SAAS,EAAE,OAAO,CAAC,IAAI,EACvB,KAAK,EAAE;YACL,KAAK,EAAE,KAAK,CAAC,KAAK;YAClB,MAAM,EAAE,KAAK,CAAC,MAAM;SACrB,iBACY,KAAK,CAAC,EAAE,IAEpB,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CACb,oBAAC,YAAY,IAAC,KAAK,EAAE,KAAK,CAAC,KAAK,GAAI,CACrC,CAAC,CAAC,CAAC,CACF;QACG,cAAc,CAAC,CAAC,CAAC,oBAAC,UAAU,IAAC,KAAK,EAAE,KAAK,GAAI,CAAC,CAAC,CAAC,IAAI;QACrD;YACG,CAAC,UAAU,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CACpB,6BACE,SAAS,EAAE,OAAO,CAAC,QAAQ,EAC3B,KAAK,EAAE;oBACL,KAAK,EAAE,KAAK,CAAC,KAAK;oBAClB,MAAM,EAAE,KAAK,CAAC,MAAM;iBACrB;gBAED,6BACE,KAAK,EAAE;wBACL,SAAS,EAAE,CAAC,UAAU,KAAK,CAAC,aAAa,MAAM,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC;wBAC1D,UAAU,EAAE,gBAAgB;wBAC5B,eAAe,EAAE,KAAK,CAAC,QAAQ;6BAC5B,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,GAAG,CAAC,IAAI,CAAC;6BAClB,IAAI,CAAC,GAAG,CAAC;qBACb;oBAED,6BACE,KAAK,EAAE;4BACL,QAAQ,EAAE,UAAU;4BACpB,IAAI,EAAE,CAAC;4BACP,GAAG,EAAE,CAAC;yBACP,EACD,SAAS,EAAE,OAAO,CAAC,SAAS,EAC5B,KAAK,EAAE,GAAG,KAAK,CAAC,WAAW,IAAI,EAC/B,MAAM,EAAE,GAAG,KAAK,CAAC,YAAY,IAAI,EACjC,OAAO,EAAC,KAAK;wBAEb,2BAAG,SAAS,EAAE,aAAa,KAAK,CAAC,QAAQ,GAAG;4BAC1C,oBAAC,MAAM,IAAC,KAAK,EAAE,KAAK,GAAI,CACtB,CACA,CACF,CACF,CACP;YACD,oBAAC,QAAQ,IAAC,KAAK,EAAE,KAAK,EAAE,aAAa,EAAE,UAAU,GAAI;YACpD,KAAK,CAAC,wBAAwB,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CACvC,oBAAC,YAAY,IACX,MAAM,EAAE,KAAK,CAAC,YAAY,EAC1B,KAAK,EAAE;oBACL,MAAM,EAAE,gBAAgB;oBACxB,QAAQ,EAAE,UAAU;oBACpB,MAAM,EAAE,CAAC;oBACT,IAAI,EAAE,CAAC;oBACP,UAAU,EAAE,MAAM;oBAClB,SAAS,EAAE,YAAY;oBACvB,SAAS,EAAE,mBAAmB;iBAC/B,GACD,CACH,CACA,CACF,CACJ,CACG,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,YAAY,CAAA"}
1
+ {"version":3,"file":"CircularView.js","sourceRoot":"","sources":["../../../src/CircularView/components/CircularView.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,YAAY,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAA;AAC7D,OAAO,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAA;AACtD,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,IAAI,EAAE,MAAM,sBAAsB,CAAA;AAE3C,QAAQ;AACR,OAAO,WAAW,MAAM,6BAA6B,CAAA;AACrD,OAAO,UAAU,MAAM,4BAA4B,CAAA;AACnD,OAAO,cAAc,MAAM,gCAAgC,CAAA;AAC3D,OAAO,eAAe,MAAM,iCAAiC,CAAA;AAC7D,OAAO,YAAY,MAAM,8BAA8B,CAAA;AACvD,OAAO,QAAQ,MAAM,0BAA0B,CAAA;AAC/C,OAAO,EAAE,aAAa,IAAI,iBAAiB,EAAE,MAAM,wBAAwB,CAAA;AAE3E,SAAS;AACT,OAAO,KAAK,MAAM,SAAS,CAAA;AAC3B,OAAO,UAAU,MAAM,cAAc,CAAA;AAGrC,MAAM,gBAAgB,GAAG,CAAC,CAAA;AAE1B,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,IAAI,EAAE;QACJ,QAAQ,EAAE,UAAU;QACpB,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAC9B,QAAQ,EAAE,QAAQ;QAClB,UAAU,EAAE,OAAO;KACpB;IACD,QAAQ,EAAE;QACR,QAAQ,EAAE,MAAM;KACjB;IACD,SAAS,EAAE;QACT,UAAU,EAAE,MAAM;QAClB,8CAA8C;QAC9C,SAAS,EAAE,aAAa;QACxB,OAAO,EAAE,OAAO;KACjB;IACD,UAAU,EAAE;QACV,OAAO,EAAE,KAAK;QACd,MAAM,EAAE,aAAa;KACtB;IACD,QAAQ,EAAE;QACR,QAAQ,EAAE,QAAQ;QAClB,UAAU,EAAE,QAAQ;QACpB,QAAQ,EAAE,UAAU;QACpB,UAAU,EAAE,IAAI,CAAC,GAAG,CAAC;QACrB,SAAS,EAAE,YAAY;QACvB,WAAW,EAAE,mBAAmB;QAChC,YAAY,EAAE,mBAAmB;QACjC,IAAI,EAAE,CAAC;QACP,GAAG,EAAE,CAAC;KACP;IACD,mBAAmB,EAAE;QACnB,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC/B;CACF,CAAC,CAAC,CAAA;AAEH,MAAM,MAAM,GAAG,QAAQ,CAAC,CAAC,EAAE,KAAK,EAAgC,EAAE,EAAE;IAClE,OAAO,CACL;QACG,KAAK,CAAC,YAAY,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,CAC/B,oBAAC,KAAK,IACJ,GAAG,EAAE,iBAAiB;YACpB,aAAa;YACb,KAAK,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,KAAK,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,MAAM,CAC7D,EACD,KAAK,EAAE,KAAK,EACZ,KAAK,EAAE,KAAK,GACZ,CACH,CAAC;QACD,KAAK,CAAC,MAAM,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;YACxB,MAAM,OAAO,GAAG,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAA;YACjC,OAAO,CACL,oBAAC,OAAO,CAAC,kBAAkB,IACzB,GAAG,EAAE,OAAO,CAAC,EAAE,EACf,OAAO,EAAE,OAAO,EAChB,IAAI,EAAE,KAAK,GACX,CACH,CAAA;QACH,CAAC,CAAC,CACD,CACJ,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,QAAQ,GAAG,QAAQ,CAAC,UAAU,EAClC,KAAK,EACL,aAAa,GAId;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,OAAO,CACL,6BAAK,SAAS,EAAE,OAAO,CAAC,QAAQ;QAC9B,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,aAAa,EAC5B,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,KAAK,EAAE,KAAK,CAAC,iBAAiB,CAAC,CAAC,CAAC,oBAAoB,CAAC,CAAC,CAAC,UAAU,EAClE,QAAQ,EACN,CAAC,aAAa,IAAI,KAAK,CAAC,YAAY,IAAI,KAAK,CAAC,iBAAiB,EAEjE,KAAK,EAAC,WAAW;YAEjB,oBAAC,WAAW,OAAG,CACJ;QAEb,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,YAAY,EAC3B,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,KAAK,EAAC,SAAS,EACf,QAAQ,EAAE,CAAC,aAAa,IAAI,KAAK,CAAC,YAAY,EAC9C,KAAK,EAAC,WAAW;YAEjB,oBAAC,UAAU,OAAG,CACH;QAEb,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,4BAA4B,EAC3C,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,KAAK,EAAC,0BAA0B,EAChC,QAAQ,EAAE,CAAC,aAAa,EACxB,KAAK,EAAC,WAAW;YAEjB,oBAAC,cAAc,OAAG,CACP;QAEb,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,qBAAqB,EACpC,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,KAAK,EAAC,kBAAkB,EACxB,QAAQ,EAAE,CAAC,aAAa,EACxB,KAAK,EAAC,WAAW;YAEjB,oBAAC,eAAe,OAAG,CACR;QAEb,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,qBAAqB,EACpC,SAAS,EAAE,OAAO,CAAC,UAAU,EAC7B,KAAK,EACH,KAAK,CAAC,iBAAiB;gBACrB,CAAC,CAAC,6BAA6B;gBAC/B,CAAC,CAAC,gCAAgC,EAEtC,QAAQ,EAAE,KAAK,CAAC,cAAc,EAC9B,KAAK,EAAC,WAAW,IAEhB,KAAK,CAAC,iBAAiB,CAAC,CAAC,CAAC,oBAAC,QAAQ,OAAG,CAAC,CAAC,CAAC,oBAAC,YAAY,OAAG,CAC/C;QAEZ,KAAK,CAAC,uBAAuB,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CACtC,oBAAC,UAAU,IACT,OAAO,EAAE,KAAK,CAAC,qBAAqB,EACpC,KAAK,EAAC,qBAAqB,iBACf,uBAAuB,EACnC,KAAK,EAAC,WAAW;YAEjB,oBAAC,iBAAiB,OAAG,CACV,CACd,CACG,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,YAAY,GAAG,QAAQ,CAAC,CAAC,EAAE,KAAK,EAAgC,EAAE,EAAE;IACxE,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,WAAW,GACf,CAAC,CAAC,KAAK,CAAC,gBAAgB,CAAC,MAAM;QAC/B,CAAC,CAAC,KAAK,CAAC,WAAW;QACnB,CAAC,CAAC,KAAK,CAAC,YAAY,CAAA;IAEtB,MAAM,cAAc,GAAG,CAAC,WAAW,IAAI,CAAC,KAAK,CAAC,iBAAiB,CAAA;IAC/D,MAAM,UAAU,GAAG,WAAW,IAAI,CAAC,cAAc,CAAA;IAEjD,OAAO,CACL,6BACE,SAAS,EAAE,OAAO,CAAC,IAAI,EACvB,KAAK,EAAE;YACL,KAAK,EAAE,KAAK,CAAC,KAAK;YAClB,MAAM,EAAE,KAAK,CAAC,MAAM;SACrB,iBACY,KAAK,CAAC,EAAE,IAEpB,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CACb,oBAAC,YAAY,IAAC,KAAK,EAAE,KAAK,CAAC,KAAK,GAAI,CACrC,CAAC,CAAC,CAAC,CACF;QACG,cAAc,CAAC,CAAC,CAAC,oBAAC,UAAU,IAAC,KAAK,EAAE,KAAK,GAAI,CAAC,CAAC,CAAC,IAAI;QACrD;YACG,CAAC,UAAU,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CACpB,6BACE,SAAS,EAAE,OAAO,CAAC,QAAQ,EAC3B,KAAK,EAAE;oBACL,KAAK,EAAE,KAAK,CAAC,KAAK;oBAClB,MAAM,EAAE,KAAK,CAAC,MAAM;iBACrB;gBAED,6BACE,KAAK,EAAE;wBACL,SAAS,EAAE,CAAC,UAAU,KAAK,CAAC,aAAa,MAAM,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC;wBAC1D,UAAU,EAAE,gBAAgB;wBAC5B,eAAe,EAAE,KAAK,CAAC,QAAQ;6BAC5B,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,GAAG,CAAC,IAAI,CAAC;6BAClB,IAAI,CAAC,GAAG,CAAC;qBACb;oBAED,6BACE,KAAK,EAAE;4BACL,QAAQ,EAAE,UAAU;4BACpB,IAAI,EAAE,CAAC;4BACP,GAAG,EAAE,CAAC;yBACP,EACD,SAAS,EAAE,OAAO,CAAC,SAAS,EAC5B,KAAK,EAAE,GAAG,KAAK,CAAC,WAAW,IAAI,EAC/B,MAAM,EAAE,GAAG,KAAK,CAAC,YAAY,IAAI,EACjC,OAAO,EAAC,KAAK;wBAEb,2BAAG,SAAS,EAAE,aAAa,KAAK,CAAC,QAAQ,GAAG;4BAC1C,oBAAC,MAAM,IAAC,KAAK,EAAE,KAAK,GAAI,CACtB,CACA,CACF,CACF,CACP;YACD,oBAAC,QAAQ,IAAC,KAAK,EAAE,KAAK,EAAE,aAAa,EAAE,UAAU,GAAI;YACpD,KAAK,CAAC,wBAAwB,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CACvC,oBAAC,YAAY,IACX,MAAM,EAAE,KAAK,CAAC,YAAY,EAC1B,KAAK,EAAE;oBACL,MAAM,EAAE,gBAAgB;oBACxB,QAAQ,EAAE,UAAU;oBACpB,MAAM,EAAE,CAAC;oBACT,IAAI,EAAE,CAAC;oBACP,UAAU,EAAE,MAAM;oBAClB,SAAS,EAAE,YAAY;oBACvB,SAAS,EAAE,mBAAmB;iBAC/B,GACD,CACH,CACA,CACF,CACJ,CACG,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,YAAY,CAAA"}
@@ -0,0 +1,3 @@
1
+ import PluginManager from '@jbrowse/core/PluginManager';
2
+ declare const _default: (pluginManager: PluginManager) => void;
3
+ export default _default;
@@ -0,0 +1,12 @@
1
+ import { lazy } from 'react';
2
+ import ViewType from '@jbrowse/core/pluggableElementTypes/ViewType';
3
+ import stateModelFactory from './models/CircularView';
4
+ export default (pluginManager) => {
5
+ pluginManager.addViewType(() => new ViewType({
6
+ ReactComponent: lazy(() => import('./components/CircularView')),
7
+ stateModel: stateModelFactory(pluginManager),
8
+ name: 'CircularView',
9
+ displayName: 'Circular view',
10
+ }));
11
+ };
12
+ //# sourceMappingURL=index.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/CircularView/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,IAAI,EAAE,MAAM,OAAO,CAAA;AAE5B,OAAO,QAAQ,MAAM,8CAA8C,CAAA;AACnE,OAAO,iBAAiB,MAAM,uBAAuB,CAAA;AAErD,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,WAAW,CACvB,GAAG,EAAE,CACH,IAAI,QAAQ,CAAC;QACX,cAAc,EAAE,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,2BAA2B,CAAC,CAAC;QAC/D,UAAU,EAAE,iBAAiB,CAAC,aAAa,CAAC;QAC5C,IAAI,EAAE,cAAc;QACpB,WAAW,EAAE,eAAe;KAC7B,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
@@ -0,0 +1,3 @@
1
+ import PluginManager from '@jbrowse/core/PluginManager';
2
+ declare const _default: (pluginManager: PluginManager) => void;
3
+ export default _default;
@@ -0,0 +1,20 @@
1
+ import { when } from 'mobx';
2
+ export default (pluginManager) => {
3
+ pluginManager.addToExtensionPoint('LaunchView-CircularView',
4
+ // @ts-ignore
5
+ async ({ session, assembly, loc, tracks = [], }) => {
6
+ const { assemblyManager } = session;
7
+ const view = session.addView('CircularView', {});
8
+ await when(() => view.initialized);
9
+ if (!assembly) {
10
+ throw new Error('No assembly provided when launching circular genome view');
11
+ }
12
+ const asm = await assemblyManager.waitForAssembly(assembly);
13
+ if (!asm) {
14
+ throw new Error(`Assembly "${assembly}" not found when launching circular genome view`);
15
+ }
16
+ view.setDisplayedRegions(asm.regions || []);
17
+ tracks.forEach(track => view.showTrack(track));
18
+ });
19
+ };
20
+ //# sourceMappingURL=index.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/LaunchCircularView/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,IAAI,EAAE,MAAM,MAAM,CAAA;AAS3B,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,mBAAmB,CAC/B,yBAAyB;IACzB,aAAa;IACb,KAAK,EAAE,EACL,OAAO,EACP,QAAQ,EACR,GAAG,EACH,MAAM,GAAG,EAAE,GAMZ,EAAE,EAAE;QACH,MAAM,EAAE,eAAe,EAAE,GAAG,OAAO,CAAA;QACnC,MAAM,IAAI,GAAG,OAAO,CAAC,OAAO,CAAC,cAAc,EAAE,EAAE,CAAQ,CAAA;QAEvD,MAAM,IAAI,CAAC,GAAG,EAAE,CAAC,IAAI,CAAC,WAAW,CAAC,CAAA;QAElC,IAAI,CAAC,QAAQ,EAAE;YACb,MAAM,IAAI,KAAK,CACb,0DAA0D,CAC3D,CAAA;SACF;QAED,MAAM,GAAG,GAAG,MAAM,eAAe,CAAC,eAAe,CAAC,QAAQ,CAAC,CAAA;QAC3D,IAAI,CAAC,GAAG,EAAE;YACR,MAAM,IAAI,KAAK,CACb,aAAa,QAAQ,iDAAiD,CACvE,CAAA;SACF;QAED,IAAI,CAAC,mBAAmB,CAAC,GAAG,CAAC,OAAO,IAAI,EAAE,CAAC,CAAA;QAE3C,MAAM,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC,CAAC,CAAA;IAChD,CAAC,CACF,CAAA;AACH,CAAC,CAAA"}
package/esm/index.d.ts CHANGED
@@ -6,5 +6,5 @@ export default class CircularViewPlugin extends Plugin {
6
6
  install(pluginManager: PluginManager): void;
7
7
  configure(pluginManager: PluginManager): void;
8
8
  }
9
- export { BaseChordDisplayModel, baseChordDisplayConfig, BaseChordDisplayComponent, } from './BaseChordDisplay';
9
+ export { baseChordDisplayConfig, BaseChordDisplayModel, BaseChordDisplayComponent, } from './BaseChordDisplay';
10
10
  export type { CircularViewModel, CircularViewStateModel };