@jbrowse/plugin-circular-view 2.2.1 → 2.3.0

package/dist/BaseChordDisplay/models/renderReaction.js

@@ -1,6 +1,10 @@
 "use strict";
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.renderReactionEffect = exports.renderReactionData = void 0;
+const clone_1 = __importDefault(require("clone"));
 const tracks_1 = require("@jbrowse/core/util/tracks");
 const util_1 = require("@jbrowse/core/util");
 // eslint-disable-next-line @typescript-eslint/no-explicit-any
@@ -15,9 +19,9 @@ function renderReactionData(self) {
         renderProps: self.renderProps(),
         renderArgs: {
             assemblyName: (_a = view.displayedRegions[0]) === null || _a === void 0 ? void 0 : _a.assemblyName,
-            adapterConfig: JSON.parse(JSON.stringify(self.adapterConfig)),
+            adapterConfig: (0, clone_1.default)(self.adapterConfig),
             rendererType: rendererType.name,
-            regions: JSON.parse(JSON.stringify(view.displayedRegions)),
+            regions: (0, clone_1.default)(view.displayedRegions),
             blockDefinitions: self.blockDefinitions,
             sessionId: (0, tracks_1.getRpcSessionId)(self),
             timeout: 1000000,
@@ -52,7 +56,12 @@ self) {
         ...renderProps,
         signal,
     });
-    return { html, data, renderingComponent: rendererType.ReactComponent };
+    return {
+        html,
+        data,
+        reactElement: data.reactElement,
+        renderingComponent: rendererType.ReactComponent,
+    };
 }
 exports.renderReactionEffect = renderReactionEffect;
 //# sourceMappingURL=renderReaction.js.map

package/dist/BaseChordDisplay/models/renderReaction.js.map

@@ -1 +1 @@
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+{"version":3,"file":"renderReaction.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/models/renderReaction.ts"],"names":[],"mappings":";;;;;;AAAA,kDAAyB;AACzB,sDAA2D;AAC3D,6CAAkE;AAElE,8DAA8D;AAC9D,SAAgB,kBAAkB,CAAC,IAAS;;IAC1C,MAAM,IAAI,GAAG,IAAA,wBAAiB,EAAC,IAAI,CAAC,CAAA;IACpC,MAAM,EAAE,YAAY,EAAE,GAAG,IAAI,CAAA;IAC7B,MAAM,EAAE,UAAU,EAAE,GAAG,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAA;IAEvC,OAAO;QACL,YAAY;QACZ,UAAU;QACV,WAAW,EAAE,IAAI,CAAC,WAAW,EAAE;QAC/B,UAAU,EAAE;YACV,YAAY,EAAE,MAAA,IAAI,CAAC,gBAAgB,CAAC,CAAC,CAAC,0CAAE,YAAY;YACpD,aAAa,EAAE,IAAA,eAAK,EAAC,IAAI,CAAC,aAAa,CAAC;YACxC,YAAY,EAAE,YAAY,CAAC,IAAI;YAC/B,OAAO,EAAE,IAAA,eAAK,EAAC,IAAI,CAAC,gBAAgB,CAAC;YACrC,gBAAgB,EAAE,IAAI,CAAC,gBAAgB;YACvC,SAAS,EAAE,IAAA,wBAAe,EAAC,IAAI,CAAC;YAChC,OAAO,EAAE,OAAO;SACjB;KACF,CAAA;AACH,CAAC;AAnBD,gDAmBC;AAEM,KAAK,UAAU,oBAAoB;AACxC,8DAA8D;AAC9D,KAAU,EACV,MAAmB;AACnB,8DAA8D;AAC9D,IAAS;IAET,IAAI,CAAC,KAAK,EAAE;QACV,MAAM,IAAI,KAAK,CAAC,6BAA6B,CAAC,CAAA;KAC/C;IAED,MAAM,EACJ,YAAY,EACZ,UAAU,EACV,sBAAsB,EACtB,UAAU,EACV,WAAW,GACZ,GAAG,KAAK,CAAA;IAET,IAAI,sBAAsB,EAAE;QAC1B,OAAO,EAAE,OAAO,EAAE,sBAAsB,EAAE,CAAA;KAC3C;IAED,oDAAoD;IACpD,IACE,CAAC,KAAK,CAAC,WAAW,CAAC,MAAM;QACzB,CAAC,KAAK,CAAC,UAAU,CAAC,OAAO;QACzB,CAAC,KAAK,CAAC,UAAU,CAAC,OAAO,CAAC,MAAM,EAChC;QACA,OAAO,EAAE,OAAO,EAAE,iBAAiB,EAAE,CAAA;KACtC;IAED,mCAAmC;IACnC,IAAI,CAAC,IAAI,CAAC,wBAAwB,CAAC,YAAY,CAAC,EAAE;QAChD,MAAM,IAAI,KAAK,CACb,YAAY,YAAY,CAAC,IAAI,2CAA2C,CACzE,CAAA;KACF;IAED,MAAM,EAAE,IAAI,EAAE,GAAG,IAAI,EAAE,GAAG,MAAM,YAAY,CAAC,cAAc,CAAC,UAAU,EAAE;QACtE,GAAG,UAAU;QACb,GAAG,WAAW;QACd,MAAM;KACP,CAAC,CAAA;IAEF,OAAO;QACL,IAAI;QACJ,IAAI;QACJ,YAAY,EAAE,IAAI,CAAC,YAAY;QAC/B,kBAAkB,EAAE,YAAY,CAAC,cAAc;KAChD,CAAA;AACH,CAAC;AAnDD,oDAmDC"}

package/dist/CircularView/components/CircularView.js

@@ -5,9 +5,9 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 const react_1 = __importDefault(require("react"));
 const mobx_react_1 = require("mobx-react");
+const material_1 = require("@mui/material");
 const ui_1 = require("@jbrowse/core/ui");
 const util_1 = require("@jbrowse/core/util");
-const material_1 = require("@mui/material");
 const mui_1 = require("tss-react/mui");
 const colors_1 = require("@mui/material/colors");
 // icons
@@ -67,7 +67,7 @@ const Slices = (0, mobx_react_1.observer)(({ model }) => {
             return (react_1.default.createElement(display.RenderingComponent, { key: display.id, display: display, view: model }));
         })));
 });
-const Controls = (0, mobx_react_1.observer)(({ model, showingFigure, }) => {
+const Controls = (0, mobx_react_1.observer)(function ({ model, showingFigure, }) {
     const { classes } = useStyles();
     return (react_1.default.createElement("div", { className: classes.controls },
         react_1.default.createElement(material_1.IconButton, { onClick: model.zoomOutButton, className: classes.iconButton, title: model.lockedFitToWindow ? 'unlock to zoom out' : 'zoom out', disabled: !showingFigure || model.atMaxBpPerPx || model.lockedFitToWindow, color: "secondary" },

package/dist/CircularView/components/CircularView.js.map

@@ -1 +1 @@
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package/dist/CircularView/index.d.ts

@@ -0,0 +1,3 @@
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/dist/CircularView/index.js

@@ -0,0 +1,40 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const react_1 = require("react");
+const ViewType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/ViewType"));
+const CircularView_1 = __importDefault(require("./models/CircularView"));
+exports.default = (pluginManager) => {
+    pluginManager.addViewType(() => new ViewType_1.default({
+        ReactComponent: (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./components/CircularView')))),
+        stateModel: (0, CircularView_1.default)(pluginManager),
+        name: 'CircularView',
+        displayName: 'Circular view',
+    }));
+};
+//# sourceMappingURL=index.js.map

package/dist/CircularView/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/CircularView/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,iCAA4B;AAE5B,4FAAmE;AACnE,yEAAqD;AAErD,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,WAAW,CACvB,GAAG,EAAE,CACH,IAAI,kBAAQ,CAAC;QACX,cAAc,EAAE,IAAA,YAAI,EAAC,GAAG,EAAE,mDAAQ,2BAA2B,GAAC,CAAC;QAC/D,UAAU,EAAE,IAAA,sBAAiB,EAAC,aAAa,CAAC;QAC5C,IAAI,EAAE,cAAc;QACpB,WAAW,EAAE,eAAe;KAC7B,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}

package/dist/LaunchCircularView/index.d.ts

@@ -0,0 +1,3 @@
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/dist/LaunchCircularView/index.js

@@ -0,0 +1,22 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+const mobx_1 = require("mobx");
+exports.default = (pluginManager) => {
+    pluginManager.addToExtensionPoint('LaunchView-CircularView', 
+    // @ts-ignore
+    async ({ session, assembly, loc, tracks = [], }) => {
+        const { assemblyManager } = session;
+        const view = session.addView('CircularView', {});
+        await (0, mobx_1.when)(() => view.initialized);
+        if (!assembly) {
+            throw new Error('No assembly provided when launching circular genome view');
+        }
+        const asm = await assemblyManager.waitForAssembly(assembly);
+        if (!asm) {
+            throw new Error(`Assembly "${assembly}" not found when launching circular genome view`);
+        }
+        view.setDisplayedRegions(asm.regions || []);
+        tracks.forEach(track => view.showTrack(track));
+    });
+};
+//# sourceMappingURL=index.js.map

package/dist/LaunchCircularView/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/LaunchCircularView/index.ts"],"names":[],"mappings":";;AAAA,+BAA2B;AAS3B,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,mBAAmB,CAC/B,yBAAyB;IACzB,aAAa;IACb,KAAK,EAAE,EACL,OAAO,EACP,QAAQ,EACR,GAAG,EACH,MAAM,GAAG,EAAE,GAMZ,EAAE,EAAE;QACH,MAAM,EAAE,eAAe,EAAE,GAAG,OAAO,CAAA;QACnC,MAAM,IAAI,GAAG,OAAO,CAAC,OAAO,CAAC,cAAc,EAAE,EAAE,CAAQ,CAAA;QAEvD,MAAM,IAAA,WAAI,EAAC,GAAG,EAAE,CAAC,IAAI,CAAC,WAAW,CAAC,CAAA;QAElC,IAAI,CAAC,QAAQ,EAAE;YACb,MAAM,IAAI,KAAK,CACb,0DAA0D,CAC3D,CAAA;SACF;QAED,MAAM,GAAG,GAAG,MAAM,eAAe,CAAC,eAAe,CAAC,QAAQ,CAAC,CAAA;QAC3D,IAAI,CAAC,GAAG,EAAE;YACR,MAAM,IAAI,KAAK,CACb,aAAa,QAAQ,iDAAiD,CACvE,CAAA;SACF;QAED,IAAI,CAAC,mBAAmB,CAAC,GAAG,CAAC,OAAO,IAAI,EAAE,CAAC,CAAA;QAE3C,MAAM,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC,CAAC,CAAA;IAChD,CAAC,CACF,CAAA;AACH,CAAC,CAAA"}

package/dist/index.d.ts

@@ -6,5 +6,5 @@ export default class CircularViewPlugin extends Plugin {
     install(pluginManager: PluginManager): void;
     configure(pluginManager: PluginManager): void;
 }
-export { BaseChordDisplayModel, baseChordDisplayConfig, BaseChordDisplayComponent, } from './BaseChordDisplay';
+export { baseChordDisplayConfig, BaseChordDisplayModel, BaseChordDisplayComponent, } from './BaseChordDisplay';
 export type { CircularViewModel, CircularViewStateModel };

package/dist/index.js

@@ -1,66 +1,23 @@
 "use strict";
-var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    var desc = Object.getOwnPropertyDescriptor(m, k);
-    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
-      desc = { enumerable: true, get: function() { return m[k]; } };
-    }
-    Object.defineProperty(o, k2, desc);
-}) : (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    o[k2] = m[k];
-}));
-var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
-    Object.defineProperty(o, "default", { enumerable: true, value: v });
-}) : function(o, v) {
-    o["default"] = v;
-});
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.BaseChordDisplayComponent = exports.baseChordDisplayConfig = exports.BaseChordDisplayModel = void 0;
-const react_1 = require("react");
-const mobx_1 = require("mobx");
+exports.BaseChordDisplayComponent = exports.BaseChordDisplayModel = exports.baseChordDisplayConfig = void 0;
 const util_1 = require("@jbrowse/core/util");
 const Plugin_1 = __importDefault(require("@jbrowse/core/Plugin"));
-const ViewType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/ViewType"));
+const CircularView_1 = __importDefault(require("./CircularView"));
+const LaunchCircularView_1 = __importDefault(require("./LaunchCircularView"));
+// icons
 const DataUsage_1 = __importDefault(require("@mui/icons-material/DataUsage"));
-const CircularView_1 = __importDefault(require("./CircularView/models/CircularView"));
 class CircularViewPlugin extends Plugin_1.default {
     constructor() {
         super(...arguments);
         this.name = 'CircularViewPlugin';
     }
     install(pluginManager) {
-        pluginManager.addViewType(() => new ViewType_1.default({
-            ReactComponent: (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./CircularView/components/CircularView')))),
-            stateModel: (0, CircularView_1.default)(pluginManager),
-            name: 'CircularView',
-        }));
-        pluginManager.addToExtensionPoint('LaunchView-CircularView', 
-        // @ts-ignore
-        async ({ session, assembly, loc, tracks = [], }) => {
-            const { assemblyManager } = session;
-            const view = session.addView('CircularView', {});
-            await (0, mobx_1.when)(() => view.initialized);
-            if (!assembly) {
-                throw new Error('No assembly provided when launching circular genome view');
-            }
-            const asm = await assemblyManager.waitForAssembly(assembly);
-            if (!asm) {
-                throw new Error(`Assembly "${assembly}" not found when launching circular genome view`);
-            }
-            view.setDisplayedRegions(asm.regions || []);
-            tracks.forEach(track => view.showTrack(track));
-        });
+        (0, CircularView_1.default)(pluginManager);
+        (0, LaunchCircularView_1.default)(pluginManager);
     }
     configure(pluginManager) {
         if ((0, util_1.isAbstractMenuManager)(pluginManager.rootModel)) {
@@ -76,7 +33,7 @@ class CircularViewPlugin extends Plugin_1.default {
 }
 exports.default = CircularViewPlugin;
 var BaseChordDisplay_1 = require("./BaseChordDisplay");
-Object.defineProperty(exports, "BaseChordDisplayModel", { enumerable: true, get: function () { return BaseChordDisplay_1.BaseChordDisplayModel; } });
 Object.defineProperty(exports, "baseChordDisplayConfig", { enumerable: true, get: function () { return BaseChordDisplay_1.baseChordDisplayConfig; } });
+Object.defineProperty(exports, "BaseChordDisplayModel", { enumerable: true, get: function () { return BaseChordDisplay_1.BaseChordDisplayModel; } });
 Object.defineProperty(exports, "BaseChordDisplayComponent", { enumerable: true, get: function () { return BaseChordDisplay_1.BaseChordDisplayComponent; } });
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;;;;AAAA,6CAAgF;AAEhF,kEAAyC;AAOzC,kEAA0C;AAC1C,8EAAsD;AAEtD,QAAQ;AACR,8EAAyD;AAEzD,MAAqB,kBAAmB,SAAQ,gBAAM;IAAtD;;QACE,SAAI,GAAG,oBAAoB,CAAA;IAkB7B,CAAC;IAhBC,OAAO,CAAC,aAA4B;QAClC,IAAA,sBAAa,EAAC,aAAa,CAAC,CAAA;QAC5B,IAAA,4BAAmB,EAAC,aAAa,CAAC,CAAA;IACpC,CAAC;IAED,SAAS,CAAC,aAA4B;QACpC,IAAI,IAAA,4BAAqB,EAAC,aAAa,CAAC,SAAS,CAAC,EAAE;YAClD,aAAa,CAAC,SAAS,CAAC,eAAe,CAAC,CAAC,KAAK,CAAC,EAAE;gBAC/C,KAAK,EAAE,eAAe;gBACtB,IAAI,EAAE,mBAAa;gBACnB,OAAO,EAAE,CAAC,OAA6B,EAAE,EAAE;oBACzC,OAAO,CAAC,OAAO,CAAC,cAAc,EAAE,EAAE,CAAC,CAAA;gBACrC,CAAC;aACF,CAAC,CAAA;SACH;IACH,CAAC;CACF;AAnBD,qCAmBC;AAED,uDAI2B;AAHzB,0HAAA,sBAAsB,OAAA;AACtB,yHAAA,qBAAqB,OAAA;AACrB,6HAAA,yBAAyB,OAAA"}

package/esm/BaseChordDisplay/components/BaseChordDisplay.d.ts

@@ -1,4 +1,12 @@
-/// <reference types="react" />
-declare function BaseChordDisplay({ display }: any): JSX.Element;
-declare const _default: typeof BaseChordDisplay;
+import React from 'react';
+declare const _default: ({ display, }: {
+    display: {
+        filled: boolean;
+        error: unknown;
+        reactElement: React.ReactElement;
+        renderProps: {
+            radius: number;
+        };
+    };
+}) => JSX.Element;
 export default _default;

package/esm/BaseChordDisplay/components/BaseChordDisplay.js

@@ -1,17 +1,15 @@
 import React from 'react';
 import { observer } from 'mobx-react';
+// locals
 import Loading from './Loading';
 import DisplayError from './DisplayError';
-import RpcRenderedSvgGroup from './RpcRenderedSvgGroup';
-// eslint-disable-next-line @typescript-eslint/no-explicit-any
-function BaseChordDisplay({ display }) {
+export default observer(function BaseChordDisplay({ display, }) {
     if (display.error) {
         return React.createElement(DisplayError, { model: display });
     }
     if (!display.filled) {
         return React.createElement(Loading, { model: display });
     }
-    return React.createElement(RpcRenderedSvgGroup, { model: display });
-}
-export default observer(BaseChordDisplay);
+    return display.reactElement;
+});
 //# sourceMappingURL=BaseChordDisplay.js.map

package/esm/BaseChordDisplay/components/BaseChordDisplay.js.map

@@ -1 +1 @@
-{"version":3,"file":"BaseChordDisplay.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/components/BaseChordDisplay.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,OAAO,MAAM,WAAW,CAAA;AAC/B,OAAO,YAAY,MAAM,gBAAgB,CAAA;AACzC,OAAO,mBAAmB,MAAM,uBAAuB,CAAA;AACvD,8DAA8D;AAC9D,SAAS,gBAAgB,CAAC,EAAE,OAAO,EAAO;IACxC,IAAI,OAAO,CAAC,KAAK,EAAE;QACjB,OAAO,oBAAC,YAAY,IAAC,KAAK,EAAE,OAAO,GAAI,CAAA;KACxC;IACD,IAAI,CAAC,OAAO,CAAC,MAAM,EAAE;QACnB,OAAO,oBAAC,OAAO,IAAC,KAAK,EAAE,OAAO,GAAI,CAAA;KACnC;IACD,OAAO,oBAAC,mBAAmB,IAAC,KAAK,EAAE,OAAO,GAAI,CAAA;AAChD,CAAC;AACD,eAAe,QAAQ,CAAC,gBAAgB,CAAC,CAAA"}
+{"version":3,"file":"BaseChordDisplay.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/components/BaseChordDisplay.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,SAAS;AACT,OAAO,OAAO,MAAM,WAAW,CAAA;AAC/B,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,QAAQ,CAAC,SAAS,gBAAgB,CAAC,EAChD,OAAO,GAQR;IACC,IAAI,OAAO,CAAC,KAAK,EAAE;QACjB,OAAO,oBAAC,YAAY,IAAC,KAAK,EAAE,OAAO,GAAI,CAAA;KACxC;IACD,IAAI,CAAC,OAAO,CAAC,MAAM,EAAE;QACnB,OAAO,oBAAC,OAAO,IAAC,KAAK,EAAE,OAAO,GAAI,CAAA;KACnC;IAED,OAAO,OAAO,CAAC,YAAY,CAAA;AAC7B,CAAC,CAAC,CAAA"}

package/esm/BaseChordDisplay/components/DisplayError.js

@@ -1,6 +1,6 @@
 import React from 'react';
 import { observer } from 'mobx-react';
-const DisplayError = observer(({ model, }) => {
+const DisplayError = observer(function ({ model, }) {
     const { renderProps: { radius }, error, } = model;
     return (React.createElement("g", null,
         React.createElement("defs", null,

package/esm/BaseChordDisplay/components/DisplayError.js.map

@@ -1 +1 @@
-{"version":3,"file":"DisplayError.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/components/DisplayError.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,MAAM,YAAY,GAAG,QAAQ,CAC3B,CAAC,EACC,KAAK,GAGN,EAAE,EAAE;IACH,MAAM,EACJ,WAAW,EAAE,EAAE,MAAM,EAAE,EACvB,KAAK,GACN,GAAG,KAAK,CAAA;IACT,OAAO,CACL;QACE;YACE,iCACE,EAAE,EAAC,eAAe,EAClB,KAAK,EAAC,IAAI,EACV,MAAM,EAAC,IAAI,EACX,gBAAgB,EAAC,gBAAgB,EACjC,YAAY,EAAC,gBAAgB;gBAE7B,8BACE,EAAE,EAAC,GAAG,EACN,EAAE,EAAC,GAAG,EACN,EAAE,EAAC,GAAG,EACN,EAAE,EAAC,IAAI,EACP,KAAK,EAAE,EAAE,MAAM,EAAE,mBAAmB,EAAE,WAAW,EAAE,EAAE,EAAE,GACvD,CACM,CACL;QACP,gCAAQ,EAAE,EAAC,GAAG,EAAC,EAAE,EAAC,GAAG,EAAC,CAAC,EAAE,MAAM,EAAE,IAAI,EAAC,SAAS,GAAG;QAClD,gCAAQ,EAAE,EAAC,GAAG,EAAC,EAAE,EAAC,GAAG,EAAC,CAAC,EAAE,MAAM,EAAE,IAAI,EAAC,qBAAqB,GAAG;QAC9D,8BACE,CAAC,EAAC,GAAG,EACL,CAAC,EAAC,GAAG,EACL,SAAS,EAAC,gBAAgB,EAC1B,gBAAgB,EAAC,QAAQ,EACzB,UAAU,EAAC,QAAQ,IAElB,MAAM,CAAC,KAAK,CAAC,CACT,CACL,CACL,CAAA;AACH,CAAC,CACF,CAAA;AAED,eAAe,YAAY,CAAA"}
+{"version":3,"file":"DisplayError.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/components/DisplayError.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,MAAM,YAAY,GAAG,QAAQ,CAAC,UAAU,EACtC,KAAK,GAGN;IACC,MAAM,EACJ,WAAW,EAAE,EAAE,MAAM,EAAE,EACvB,KAAK,GACN,GAAG,KAAK,CAAA;IACT,OAAO,CACL;QACE;YACE,iCACE,EAAE,EAAC,eAAe,EAClB,KAAK,EAAC,IAAI,EACV,MAAM,EAAC,IAAI,EACX,gBAAgB,EAAC,gBAAgB,EACjC,YAAY,EAAC,gBAAgB;gBAE7B,8BACE,EAAE,EAAC,GAAG,EACN,EAAE,EAAC,GAAG,EACN,EAAE,EAAC,GAAG,EACN,EAAE,EAAC,IAAI,EACP,KAAK,EAAE,EAAE,MAAM,EAAE,mBAAmB,EAAE,WAAW,EAAE,EAAE,EAAE,GACvD,CACM,CACL;QACP,gCAAQ,EAAE,EAAC,GAAG,EAAC,EAAE,EAAC,GAAG,EAAC,CAAC,EAAE,MAAM,EAAE,IAAI,EAAC,SAAS,GAAG;QAClD,gCAAQ,EAAE,EAAC,GAAG,EAAC,EAAE,EAAC,GAAG,EAAC,CAAC,EAAE,MAAM,EAAE,IAAI,EAAC,qBAAqB,GAAG;QAC9D,8BACE,CAAC,EAAC,GAAG,EACL,CAAC,EAAC,GAAG,EACL,SAAS,EAAC,gBAAgB,EAC1B,gBAAgB,EAAC,QAAQ,EACzB,UAAU,EAAC,QAAQ,IAElB,MAAM,CAAC,KAAK,CAAC,CACT,CACL,CACL,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,YAAY,CAAA"}

package/esm/BaseChordDisplay/components/Loading.js

@@ -43,8 +43,7 @@ const useStyles = makeStyles()(theme => {
         },
     };
 });
-// 'repeating-linear-gradient(45deg, transparent, transparent 5px, rgba(255,255,255,.5) 5px, rgba(255,255,255,.5) 10px)',
-const Loading = observer(({ model: { renderProps: { radius }, }, }) => {
+const Loading = observer(function ({ model: { renderProps: { radius }, }, }) {
     const { classes } = useStyles();
     // only show the loading message after 400ms to prevent excessive flickering
     const [shown, setShown] = useState(false);

package/esm/BaseChordDisplay/components/Loading.js.map

@@ -1 +1 @@
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package/esm/BaseChordDisplay/models/BaseChordDisplayModel.d.ts

@@ -1,7 +1,6 @@
 import React from 'react';
 import RendererType from '@jbrowse/core/pluggableElementTypes/renderers/RendererType';
-import { AnyReactComponentType } from '@jbrowse/core/util';
-import { Feature } from '@jbrowse/core/util/simpleFeature';
+import { AnyReactComponentType, Feature } from '@jbrowse/core/util';
 export declare const BaseChordDisplayModel: import("mobx-state-tree").IModelType<{
     id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
     type: import("mobx-state-tree").ISimpleType<string>;
@@ -65,6 +64,7 @@ export declare const BaseChordDisplayModel: import("mobx-state-tree").IModelType
     filled: boolean;
     reactElement: React.ReactElement<any, string | React.JSXElementConstructor<any>> | undefined;
     data: undefined;
+    html: string | undefined;
     message: string;
     renderingComponent: AnyReactComponentType | undefined;
     refNameMap: Record<string, string> | undefined;
@@ -77,14 +77,14 @@ export declare const BaseChordDisplayModel: import("mobx-state-tree").IModelType
     /**
      * #getter
      */
-    readonly blockDefinitions: any;
+    readonly blockDefinitions: import("../../CircularView/models/slices").Slice[];
     /**
      * #method
      */
     renderProps(): any;
     /**
      * #getter
-     * the pluggable element type object for this diplay's
+     * the pluggable element type object for this display's
      * renderer
      */
     readonly rendererType: RendererType;
@@ -106,9 +106,10 @@ export declare const BaseChordDisplayModel: import("mobx-state-tree").IModelType
     /**
      * #action
      */
-    renderSuccess({ message, data, reactElement, renderingComponent, }: {
+    renderSuccess({ message, data, reactElement, html, renderingComponent, }: {
         message: string;
         data: any;
+        html: string;
         reactElement: React.ReactElement;
         renderingComponent: AnyReactComponentType;
     }): void;