@jbrowse/core 5.0.0-beta.13 → 5.0.0-beta.14
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +365 -69
- package/esm/BaseFeatureWidget/BaseFeatureDetail/ArrayValue.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/ArrayValue.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Attributes.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Attributes.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseAttributes.d.ts +2 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseAttributes.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCard.d.ts +2 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCard.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCoreDetails.d.ts +2 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCoreDetails.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BasicValue.d.ts +5 -4
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BasicValue.js +6 -4
- package/esm/BaseFeatureWidget/BaseFeatureDetail/CoreDetails.d.ts +2 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/CoreDetails.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/DataGridDetails.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/DataGridDetails.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureDetails.js +2 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureWash.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureWash.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FieldActionsButton.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FieldActionsButton.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FieldName.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FieldName.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Formatter.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Formatter.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/ParentFeatureLine.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/ParentFeatureLine.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/SimpleField.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/SimpleField.js +4 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/UriField.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/UriField.js +4 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceBody.d.ts +3 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceBody.js +4 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeatureDetails.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeatureDetails.js +10 -19
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceLegend.d.ts +3 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceLegend.js +4 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequencePanel.js +4 -4
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/HelpDialog.d.ts +3 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/HelpDialog.js +4 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceDialog.d.ts +1 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceDialog.js +2 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceTypeSelector.d.ts +1 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceTypeSelector.js +15 -36
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/TranscriptSelector.d.ts +3 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/TranscriptSelector.js +4 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/featureTypeUtil.d.ts +2 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/featureTypeUtil.js +22 -6
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/model.d.ts +13 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/model.js +28 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/SequenceDisplay.js +2 -2
- package/esm/BaseFeatureWidget/stateModelFactory.d.ts +2 -0
- package/esm/PluginManager.d.ts +1 -0
- package/esm/PluginManager.js +6 -0
- package/esm/ReExports/coreModules.generated.js +538 -524
- package/esm/ReExports/coreWorkerModules.generated.js +454 -441
- package/esm/ReExports/lazify.js +3 -2
- package/esm/ReExports/list.js +15 -6
- package/esm/ReExports/names.d.ts +1 -0
- package/esm/ReExports/names.generated.d.ts +2 -0
- package/esm/ReExports/names.generated.js +566 -0
- package/esm/ReExports/names.js +3 -0
- package/esm/assemblyManager/assembly.d.ts +9 -0
- package/esm/assemblyManager/assembly.js +13 -0
- package/esm/assemblyManager/assemblyConfigSchema.d.ts +6 -1
- package/esm/assemblyManager/assemblyConfigSchema.js +23 -22
- package/esm/assemblyManager/assemblyManager.d.ts +11 -0
- package/esm/assemblyManager/assemblyManager.js +2 -0
- package/esm/assemblyManager/expandAssemblyConfigShorthand.d.ts +9 -0
- package/esm/assemblyManager/expandAssemblyConfigShorthand.js +23 -0
- package/esm/checkPlugins.js +10 -4
- package/esm/configuration/configurationSchema.d.ts +18 -5
- package/esm/configuration/configurationSchema.js +9 -7
- package/esm/configuration/configurationSchemaUnion.d.ts +2 -1
- package/esm/configuration/configurationSchemaUnion.js +2 -1
- package/esm/configuration/configurationSlot.js +4 -4
- package/esm/configuration/fillLocations.d.ts +4 -2
- package/esm/configuration/fillLocations.js +9 -3
- package/esm/configuration/formatAboutConfigSchema.d.ts +2 -2
- package/esm/configuration/formatAboutConfigSchema.js +2 -2
- package/esm/configuration/formatDetailsConfigSchema.d.ts +2 -2
- package/esm/configuration/formatDetailsConfigSchema.js +5 -5
- package/esm/configuration/getConf.js +13 -4
- package/esm/configuration/index.d.ts +1 -1
- package/esm/configuration/index.js +1 -1
- package/esm/configuration/plot.d.ts +2 -2
- package/esm/configuration/plot.js +32 -18
- package/esm/configuration/schemaRegistry.d.ts +0 -2
- package/esm/configuration/slotFacade.js +2 -2
- package/esm/configuration/snapshotPreprocess.d.ts +42 -18
- package/esm/configuration/snapshotPreprocess.js +94 -34
- package/esm/configuration/tabixShorthand.js +1 -3
- package/esm/data_adapters/BaseAdapter/BaseAdapter.d.ts +7 -0
- package/esm/data_adapters/BaseAdapter/BaseAdapter.js +7 -0
- package/esm/data_adapters/BaseAdapter/BaseFeatureDataAdapter.d.ts +0 -22
- package/esm/data_adapters/BaseAdapter/BaseFeatureDataAdapter.js +0 -55
- package/esm/data_adapters/BaseAdapter/index.d.ts +0 -1
- package/esm/data_adapters/BaseAdapter/index.js +0 -1
- package/esm/data_adapters/BaseAdapter/rowSources.d.ts +2 -2
- package/esm/data_adapters/BaseAdapter/types.d.ts +1 -0
- package/esm/data_adapters/CytobandAdapter/configSchema.d.ts +2 -0
- package/esm/data_adapters/CytobandAdapter/configSchema.js +5 -0
- package/esm/data_adapters/dataAdapterCache.d.ts +25 -13
- package/esm/data_adapters/dataAdapterCache.js +68 -24
- package/esm/data_adapters/getFeatureAdapter.d.ts +9 -0
- package/esm/data_adapters/getFeatureAdapter.js +17 -0
- package/esm/pluggableElementTypes/models/BaseConnectionModelFactory.d.ts +2 -0
- package/esm/pluggableElementTypes/models/BaseConnectionModelFactory.js +2 -0
- package/esm/pluggableElementTypes/models/BaseDisplayModel.d.ts +40 -6
- package/esm/pluggableElementTypes/models/BaseDisplayModel.js +56 -8
- package/esm/pluggableElementTypes/models/BaseTrackModel.d.ts +3 -3
- package/esm/pluggableElementTypes/models/BaseTrackModel.js +7 -6
- package/esm/pluggableElementTypes/models/BaseViewModel.d.ts +2 -0
- package/esm/pluggableElementTypes/models/BaseViewModel.js +2 -0
- package/esm/pluggableElementTypes/models/InternetAccountModel.d.ts +3 -0
- package/esm/pluggableElementTypes/models/InternetAccountModel.js +3 -0
- package/esm/pluggableElementTypes/models/baseConnectionConfig.d.ts +3 -0
- package/esm/pluggableElementTypes/models/baseConnectionConfig.js +3 -0
- package/esm/pluggableElementTypes/models/baseInternetAccountConfig.d.ts +3 -1
- package/esm/pluggableElementTypes/models/baseInternetAccountConfig.js +3 -1
- package/esm/pluggableElementTypes/models/baseTrackConfig.js +9 -1
- package/esm/pluggableElementTypes/models/components/SaveTrackData.js +2 -2
- package/esm/pluggableElementTypes/models/expandTrackConfigShorthand.d.ts +1 -1
- package/esm/pluggableElementTypes/models/expandTrackConfigShorthand.js +1 -1
- package/esm/pluginDefinitions.d.ts +7 -0
- package/esm/pluginDefinitions.js +20 -0
- package/esm/rpc/RpcRegistry.d.ts +0 -10
- package/esm/rpc/byteBudget.d.ts +8 -0
- package/esm/rpc/byteBudget.js +13 -0
- package/esm/rpc/configSchema.d.ts +2 -0
- package/esm/rpc/configSchema.js +3 -1
- package/esm/rpc/coreRpcMethods.d.ts +0 -1
- package/esm/rpc/coreRpcMethods.js +0 -1
- package/esm/rpc/methods/CoreGetEncodedLayers.d.ts +2 -2
- package/esm/rpc/methods/CoreGetEncodedLayers.js +7 -5
- package/esm/rpc/methods/layerFeatures.d.ts +9 -6
- package/esm/rpc/methods/layerFeatures.js +21 -5
- package/esm/ui/ActionLink.d.ts +3 -2
- package/esm/ui/ActionLink.js +4 -2
- package/esm/ui/AddCustomPluginDialog.d.ts +3 -2
- package/esm/ui/AddCustomPluginDialog.js +6 -4
- package/esm/ui/BaseTooltip.d.ts +3 -2
- package/esm/ui/BaseTooltip.js +4 -2
- package/esm/ui/CascadingMenu.js +14 -12
- package/esm/ui/CascadingMenuButton.d.ts +2 -2
- package/esm/ui/CascadingMenuButton.js +5 -4
- package/esm/ui/CascadingMenuHelpDialog.d.ts +3 -2
- package/esm/ui/CascadingMenuHelpDialog.js +4 -2
- package/esm/ui/CascadingMenuHelpIconButton.d.ts +4 -3
- package/esm/ui/CascadingMenuHelpIconButton.js +9 -5
- package/esm/ui/ColorPicker.d.ts +5 -4
- package/esm/ui/ColorPicker.js +6 -4
- package/esm/ui/ContextMenu.d.ts +1 -1
- package/esm/ui/ContextMenu.js +1 -1
- package/esm/ui/CopyToClipboardButton.d.ts +3 -2
- package/esm/ui/CopyToClipboardButton.js +4 -2
- package/esm/ui/Crosshairs.js +13 -10
- package/esm/ui/DOMPurifySanitizedHTML.d.ts +3 -2
- package/esm/ui/DOMPurifySanitizedHTML.js +4 -2
- package/esm/ui/DataGridFlexContainer.d.ts +3 -2
- package/esm/ui/DataGridFlexContainer.js +4 -2
- package/esm/ui/Dialog.d.ts +1 -1
- package/esm/ui/Dialog.js +5 -4
- package/esm/ui/DropDownMenu.js +2 -2
- package/esm/ui/EditableTypography.d.ts +1 -1
- package/esm/ui/EditableTypography.js +3 -2
- package/esm/ui/ErrorActions.d.ts +3 -2
- package/esm/ui/ErrorActions.js +4 -2
- package/esm/ui/ErrorBanner.d.ts +2 -2
- package/esm/ui/ErrorBanner.js +3 -2
- package/esm/ui/ErrorBar.d.ts +3 -2
- package/esm/ui/ErrorBar.js +4 -2
- package/esm/ui/ErrorMessage.d.ts +3 -2
- package/esm/ui/ErrorMessage.js +4 -2
- package/esm/ui/ErrorMessageStackTraceContents.d.ts +3 -2
- package/esm/ui/ErrorMessageStackTraceContents.js +4 -2
- package/esm/ui/ErrorMessageStackTraceDialog.d.ts +3 -2
- package/esm/ui/ErrorMessageStackTraceDialog.js +4 -2
- package/esm/ui/ErrorOverlay.d.ts +3 -2
- package/esm/ui/ErrorOverlay.js +4 -2
- package/esm/ui/ExportSvgDialog.d.ts +3 -2
- package/esm/ui/ExportSvgDialog.js +4 -2
- package/esm/ui/ExternalLink.d.ts +2 -1
- package/esm/ui/ExternalLink.js +4 -2
- package/esm/ui/FactoryResetDialog.d.ts +3 -2
- package/esm/ui/FactoryResetDialog.js +4 -2
- package/esm/ui/FatalErrorDialog.d.ts +3 -2
- package/esm/ui/FatalErrorDialog.js +6 -4
- package/esm/ui/FileDropZone.d.ts +3 -2
- package/esm/ui/FileDropZone.js +4 -2
- package/esm/ui/FileSelector/LocalFileChooser.js +4 -4
- package/esm/ui/FileSelector/LocationInput.d.ts +3 -2
- package/esm/ui/FileSelector/LocationInput.js +4 -2
- package/esm/ui/FileSelector/SourceTypeSelector.d.ts +3 -2
- package/esm/ui/FileSelector/SourceTypeSelector.js +8 -6
- package/esm/ui/GpuFallbackButton.d.ts +3 -2
- package/esm/ui/GpuFallbackButton.js +4 -2
- package/esm/ui/HoverMenu.d.ts +2 -2
- package/esm/ui/HoverMenu.js +7 -3
- package/esm/ui/HoverTooltip.d.ts +3 -2
- package/esm/ui/HoverTooltip.js +4 -2
- package/esm/ui/Icons.d.ts +5 -5
- package/esm/ui/Icons.js +11 -10
- package/esm/ui/InlineMenuControls.d.ts +2 -2
- package/esm/ui/InlineMenuControls.js +4 -3
- package/esm/ui/JexlFilterRowEditors.d.ts +4 -4
- package/esm/ui/JexlFilterRowEditors.js +9 -8
- package/esm/ui/LabeledCheckbox.d.ts +3 -2
- package/esm/ui/LabeledCheckbox.js +4 -2
- package/esm/ui/LazyBaseTooltip.d.ts +12 -3
- package/esm/ui/LazyBaseTooltip.js +4 -2
- package/esm/ui/LegendSwatchGlyph.js +1 -0
- package/esm/ui/LoadingDots.d.ts +2 -1
- package/esm/ui/LoadingDots.js +4 -2
- package/esm/ui/LoadingEllipses.d.ts +5 -2
- package/esm/ui/LoadingEllipses.js +5 -3
- package/esm/ui/LoadingOverlay.d.ts +3 -2
- package/esm/ui/LoadingOverlay.js +4 -2
- package/esm/ui/LoadingProgress.d.ts +3 -2
- package/esm/ui/LoadingProgress.js +4 -2
- package/esm/ui/Logo.d.ts +2 -2
- package/esm/ui/Logo.js +9 -8
- package/esm/ui/MenuItemChevron.d.ts +2 -2
- package/esm/ui/MenuItemChevron.js +3 -2
- package/esm/ui/MenuItemEndDecoration.d.ts +2 -2
- package/esm/ui/MenuItemEndDecoration.js +3 -2
- package/esm/ui/MenuItemTrailing.d.ts +2 -2
- package/esm/ui/MenuItemTrailing.js +7 -6
- package/esm/ui/MenuTypes.d.ts +21 -1
- package/esm/ui/MenuTypes.js +20 -0
- package/esm/ui/MonospaceTextField.d.ts +3 -2
- package/esm/ui/MonospaceTextField.js +4 -2
- package/esm/ui/NumberTextField.d.ts +2 -2
- package/esm/ui/NumberTextField.js +4 -2
- package/esm/ui/PaletteContext.d.ts +11 -9
- package/esm/ui/PaletteContext.js +33 -18
- package/esm/ui/PluginStoreCard.d.ts +3 -2
- package/esm/ui/PluginStoreCard.js +4 -2
- package/esm/ui/PopoverPicker.d.ts +3 -2
- package/esm/ui/PopoverPicker.js +4 -2
- package/esm/ui/PrerenderedCanvas.d.ts +2 -2
- package/esm/ui/PrerenderedCanvas.js +3 -2
- package/esm/ui/RedErrorMessageBox.d.ts +3 -2
- package/esm/ui/RedErrorMessageBox.js +4 -2
- package/esm/ui/RefNameAutocomplete/EndAdornment.d.ts +3 -2
- package/esm/ui/RefNameAutocomplete/EndAdornment.js +4 -2
- package/esm/ui/RefNameAutocomplete/HelpDialog.d.ts +3 -2
- package/esm/ui/RefNameAutocomplete/HelpDialog.js +4 -2
- package/esm/ui/ReplaceCurrentViewButton.d.ts +3 -2
- package/esm/ui/ReplaceCurrentViewButton.js +4 -2
- package/esm/ui/ResizeHandle.d.ts +2 -2
- package/esm/ui/ResizeHandle.js +3 -2
- package/esm/ui/SanitizedHTML.d.ts +3 -2
- package/esm/ui/SanitizedHTML.js +6 -4
- package/esm/ui/ScrollChrome.d.ts +3 -2
- package/esm/ui/ScrollChrome.js +4 -2
- package/esm/ui/ScrollEdgeShadow.d.ts +2 -2
- package/esm/ui/ScrollEdgeShadow.js +2 -2
- package/esm/ui/SessionJsonPanel.d.ts +3 -2
- package/esm/ui/SessionJsonPanel.js +4 -2
- package/esm/ui/ShareLinkField.d.ts +3 -2
- package/esm/ui/ShareLinkField.js +4 -2
- package/esm/ui/SingleSlider.d.ts +2 -2
- package/esm/ui/SingleSlider.js +4 -2
- package/esm/ui/SliderTooltip.d.ts +2 -1
- package/esm/ui/SliderTooltip.js +4 -2
- package/esm/ui/SnackbarContents.d.ts +3 -2
- package/esm/ui/SnackbarContents.js +4 -2
- package/esm/ui/SnackbarModel.d.ts +2 -0
- package/esm/ui/SnackbarModel.js +2 -0
- package/esm/ui/StackTraceButton.d.ts +3 -2
- package/esm/ui/StackTraceButton.js +4 -2
- package/esm/ui/StatusProgressBar.d.ts +3 -2
- package/esm/ui/StatusProgressBar.js +4 -2
- package/esm/ui/SubmitForm.d.ts +2 -1
- package/esm/ui/SubmitForm.js +4 -2
- package/esm/ui/SvgColorLegend.d.ts +3 -4
- package/esm/ui/SvgColorLegend.js +27 -18
- package/esm/ui/TagTextField.d.ts +2 -2
- package/esm/ui/TagTextField.js +4 -2
- package/esm/ui/ViewLoadingScreen.d.ts +3 -2
- package/esm/ui/ViewLoadingScreen.js +4 -2
- package/esm/ui/colorScale.d.ts +5 -1
- package/esm/ui/colorScale.js +12 -10
- package/esm/ui/colors.d.ts +3 -3
- package/esm/ui/colors.js +7 -7
- package/esm/ui/filterMenuItems.d.ts +10 -31
- package/esm/ui/filterMenuItems.js +13 -14
- package/esm/ui/index.d.ts +1 -1
- package/esm/ui/index.js +1 -1
- package/esm/ui/launchTargetsMenuItem.js +9 -13
- package/esm/ui/legendMenuItem.d.ts +4 -4
- package/esm/ui/legendMenuItem.js +4 -4
- package/esm/ui/menuItemAdornment.d.ts +1 -1
- package/esm/ui/menuItemAdornment.js +1 -1
- package/esm/ui/menuItems.d.ts +1 -1
- package/esm/ui/menuItems.js +1 -1
- package/esm/ui/menuLabels.d.ts +2 -2
- package/esm/ui/menuLabels.js +2 -2
- package/esm/ui/palette.d.ts +2 -2
- package/esm/ui/palette.js +10 -10
- package/esm/ui/radioSubMenu.d.ts +5 -3
- package/esm/ui/radioSubMenu.js +2 -2
- package/esm/ui/rampKey.d.ts +15 -0
- package/esm/ui/rampKey.js +17 -0
- package/esm/ui/showSubMenu.d.ts +0 -5
- package/esm/ui/showSubMenu.js +6 -15
- package/esm/ui/theme.d.ts +2 -2
- package/esm/ui/theme.js +1 -1
- package/esm/ui/useAssemblySelection.d.ts +2 -0
- package/esm/ui/useMouseTracking.d.ts +8 -20
- package/esm/ui/useMouseTracking.js +23 -62
- package/esm/ui/usePlacedMenuFocus.d.ts +19 -0
- package/esm/ui/usePlacedMenuFocus.js +28 -0
- package/esm/util/Base1DViewModel.d.ts +5 -3
- package/esm/util/Base1DViewModel.js +5 -3
- package/esm/util/SvgCanvas.js +1 -1
- package/esm/util/aggregateFieldName.d.ts +1 -10
- package/esm/util/aggregateFieldName.js +1 -8
- package/esm/util/analytics.d.ts +4 -6
- package/esm/util/analytics.js +143 -12
- package/esm/util/bezierConnector.d.ts +20 -0
- package/esm/util/bezierConnector.js +34 -100
- package/esm/util/cacheBudgets.d.ts +3 -0
- package/esm/util/cacheBudgets.js +3 -0
- package/esm/util/categoricalField.d.ts +2 -2
- package/esm/util/categoricalField.js +3 -3
- package/esm/util/color/index.d.ts +1 -1
- package/esm/util/color/index.js +2 -2
- package/esm/util/color-bits/bit.js +1 -1
- package/esm/util/color-bits/parse.js +6 -6
- package/esm/util/colorBits.d.ts +15 -4
- package/esm/util/colorBits.js +38 -15
- package/esm/util/colorRamp.d.ts +3 -3
- package/esm/util/colorRamp.js +14 -2
- package/esm/util/colorScale.d.ts +114 -20
- package/esm/util/colorScale.js +124 -26
- package/esm/util/colorSchemes.d.ts +6 -4
- package/esm/util/colorSchemes.js +6 -3
- package/esm/util/createSvgRasterCanvas.d.ts +14 -1
- package/esm/util/createSvgRasterCanvas.js +36 -12
- package/esm/util/diagonalizeRegions.js +18 -9
- package/esm/util/featureTransforms.d.ts +2 -2
- package/esm/util/featureTransforms.js +85 -135
- package/esm/util/fileHandleStore.js +5 -0
- package/esm/util/groupKeys.d.ts +5 -4
- package/esm/util/groupKeys.js +15 -9
- package/esm/util/index.js +1 -1
- package/esm/util/installFetch.d.ts +2 -2
- package/esm/util/installPrerequisiteFetch.d.ts +8 -3
- package/esm/util/installPrerequisiteFetch.js +9 -7
- package/esm/util/io/RemoteFileWithRangeCache.d.ts +1 -1
- package/esm/util/io/RemoteFileWithRangeCache.js +1 -1
- package/esm/util/jexl.js +1 -1
- package/esm/util/layouts/GranularRectLayout.d.ts +19 -3
- package/esm/util/layouts/GranularRectLayout.js +57 -34
- package/esm/util/leadingEdgeAutorun.d.ts +9 -1
- package/esm/util/leadingEdgeAutorun.js +5 -2
- package/esm/util/markEncoding.d.ts +10 -8
- package/esm/util/markEncoding.js +50 -12
- package/esm/util/markEncodingTypes.d.ts +74 -20
- package/esm/util/originCut.d.ts +14 -0
- package/esm/util/originCut.js +19 -0
- package/esm/util/paintLayer.d.ts +1 -1
- package/esm/util/paintLayer.js +4 -3
- package/esm/util/pathSeries.d.ts +18 -0
- package/esm/util/pathSeries.js +143 -0
- package/esm/util/pressOwner.d.ts +20 -0
- package/esm/util/pressOwner.js +26 -0
- package/esm/util/quantileExtent.d.ts +3 -3
- package/esm/util/quantileExtent.js +3 -3
- package/esm/util/rowStackGeometry.d.ts +1 -1
- package/esm/util/rowStackGeometry.js +1 -1
- package/esm/util/sessionActivity.d.ts +36 -0
- package/esm/util/sessionActivity.js +88 -0
- package/esm/util/stepOutputs.d.ts +165 -0
- package/esm/util/stepOutputs.js +201 -0
- package/esm/util/stepTables.d.ts +7 -3
- package/esm/util/stepTables.js +86 -3
- package/esm/util/thresholdScale.d.ts +1 -1
- package/esm/util/thresholdScale.js +1 -1
- package/esm/util/tracks.js +1 -1
- package/esm/util/usePanZoom.js +4 -10
- package/esm/util/windowStep.d.ts +6 -0
- package/esm/util/windowStep.js +153 -0
- package/package.json +23 -15
- package/esm/data_adapters/BaseAdapter/featureDensity.d.ts +0 -40
- package/esm/data_adapters/BaseAdapter/featureDensity.js +0 -31
- package/esm/rpc/methods/CoreGetFeatureDensity.d.ts +0 -11
- package/esm/rpc/methods/CoreGetFeatureDensity.js +0 -22
package/esm/ReExports/lazify.js
CHANGED
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@@ -1,5 +1,6 @@
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1
1
|
import { jsx as _jsx } from "react/jsx-runtime";
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2
2
|
import { Suspense } from 'react';
|
|
3
|
+
import { observer } from 'mobx-react';
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3
4
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// React tags the result of React.lazy() with this; anything else (a plain or
|
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4
5
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// forwardRef/memo component) is already loaded and needs no Suspense boundary
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5
6
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const REACT_LAZY_TYPE = Symbol.for('react.lazy');
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|
@@ -12,9 +13,9 @@ function lazyifyComponent(key, ReactComponent) {
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12
13
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if (!isLazy(ReactComponent)) {
|
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13
14
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return [key, ReactComponent];
|
|
14
15
|
}
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|
15
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-
function Component(props) {
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16
|
+
const Component = observer(function Component(props) {
|
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16
17
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return (_jsx(Suspense, { fallback: null, children: _jsx(ReactComponent, { ...props }) }));
|
|
17
|
-
}
|
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18
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+
});
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18
19
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Component.displayName = key;
|
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19
20
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return [key, Component];
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|
20
21
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}
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package/esm/ReExports/list.js
CHANGED
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@@ -131,6 +131,8 @@ export default [
|
|
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131
131
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'@jbrowse/core/assemblyManager',
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132
132
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'@jbrowse/core/assemblyManager/assembly',
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133
133
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'@jbrowse/core/assemblyManager/assemblyConfigSchema',
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134
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+
'@jbrowse/core/assemblyManager/expandAssemblyConfigShorthand',
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135
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+
'@jbrowse/core/assemblyManager/refNameMaps',
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134
136
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'@jbrowse/core/BaseFeatureWidget',
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135
137
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'@jbrowse/core/BaseFeatureWidget/BaseFeatureDetail',
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136
138
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'@jbrowse/core/BaseFeatureWidget/BaseFeatureDetail/Attributes',
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@@ -203,6 +205,7 @@ export default [
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203
205
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'@jbrowse/core/ui/colors',
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204
206
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'@jbrowse/core/ui/colorScale',
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205
207
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'@jbrowse/core/ui/ConfirmDialog',
|
|
208
|
+
'@jbrowse/core/ui/ContextMenu',
|
|
206
209
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'@jbrowse/core/ui/DataGridFlexContainer',
|
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207
210
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'@jbrowse/core/ui/Dialog',
|
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208
211
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'@jbrowse/core/ui/DraggableDialog',
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@@ -236,6 +239,7 @@ export default [
|
|
|
236
239
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'@jbrowse/core/ui/PluginStoreCard',
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|
237
240
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'@jbrowse/core/ui/PopoverPicker',
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238
241
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'@jbrowse/core/ui/ProgressChip',
|
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242
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+
'@jbrowse/core/ui/rampKey',
|
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239
243
|
'@jbrowse/core/ui/ResizeHandle',
|
|
240
244
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'@jbrowse/core/ui/ReturnToImportFormDialog',
|
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241
245
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'@jbrowse/core/ui/SanitizedHTML',
|
|
@@ -342,9 +346,11 @@ export default [
|
|
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342
346
|
'@jbrowse/core/util/numericUtils',
|
|
343
347
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'@jbrowse/core/util/offscreenCanvasPonyfill',
|
|
344
348
|
'@jbrowse/core/util/openViews',
|
|
349
|
+
'@jbrowse/core/util/originCut',
|
|
345
350
|
'@jbrowse/core/util/paintLayer',
|
|
346
351
|
'@jbrowse/core/util/parseLineByLine',
|
|
347
352
|
'@jbrowse/core/util/preloadComponent',
|
|
353
|
+
'@jbrowse/core/util/pressOwner',
|
|
348
354
|
'@jbrowse/core/util/progress',
|
|
349
355
|
'@jbrowse/core/util/quantileExtent',
|
|
350
356
|
'@jbrowse/core/util/range',
|
|
@@ -361,6 +367,7 @@ export default [
|
|
|
361
367
|
'@jbrowse/core/util/simpleFeature',
|
|
362
368
|
'@jbrowse/core/util/starFusion',
|
|
363
369
|
'@jbrowse/core/util/stats',
|
|
370
|
+
'@jbrowse/core/util/stepOutputs',
|
|
364
371
|
'@jbrowse/core/util/svAlt',
|
|
365
372
|
'@jbrowse/core/util/SvgCanvas',
|
|
366
373
|
'@jbrowse/core/util/svgColorProps',
|
|
@@ -397,19 +404,17 @@ export default [
|
|
|
397
404
|
'@jbrowse/display-kit/BottomRightIndicators',
|
|
398
405
|
'@jbrowse/display-kit/ChromeHighlight',
|
|
399
406
|
'@jbrowse/display-kit/ChromeLegend',
|
|
407
|
+
'@jbrowse/display-kit/chromeOverlaySlots',
|
|
400
408
|
'@jbrowse/display-kit/coarseTier',
|
|
401
409
|
'@jbrowse/display-kit/CoarseTierMixin',
|
|
402
410
|
'@jbrowse/display-kit/coarseTierPhase',
|
|
403
411
|
'@jbrowse/display-kit/colorByMenu',
|
|
404
412
|
'@jbrowse/display-kit/colorConfigSchema',
|
|
413
|
+
'@jbrowse/display-kit/ColorWritesMixin',
|
|
405
414
|
'@jbrowse/display-kit/ConfigProblemsIndicator',
|
|
406
415
|
'@jbrowse/display-kit/configSchema',
|
|
407
416
|
'@jbrowse/display-kit/const',
|
|
408
417
|
'@jbrowse/display-kit/ContextMenuMixin',
|
|
409
|
-
'@jbrowse/display-kit/densityTier',
|
|
410
|
-
'@jbrowse/display-kit/densityTierConfigSchemaFields',
|
|
411
|
-
'@jbrowse/display-kit/densityTierMenu',
|
|
412
|
-
'@jbrowse/display-kit/DensityTierMixin',
|
|
413
418
|
'@jbrowse/display-kit/displayAutoruns',
|
|
414
419
|
'@jbrowse/display-kit/DisplayBackgroundProgress',
|
|
415
420
|
'@jbrowse/display-kit/DisplayChrome',
|
|
@@ -418,11 +423,11 @@ export default [
|
|
|
418
423
|
'@jbrowse/display-kit/DisplayErrorBar',
|
|
419
424
|
'@jbrowse/display-kit/DisplayLoadingOverlay',
|
|
420
425
|
'@jbrowse/display-kit/DisplayRenderErrorOverlay',
|
|
421
|
-
'@jbrowse/display-kit/DisplayStatusChromeBase',
|
|
422
426
|
'@jbrowse/display-kit/facetConfigSchema',
|
|
423
427
|
'@jbrowse/display-kit/fetchEachRegion',
|
|
424
428
|
'@jbrowse/display-kit/fetchInputs',
|
|
425
429
|
'@jbrowse/display-kit/FetchMixin',
|
|
430
|
+
'@jbrowse/display-kit/floatingLabelHost',
|
|
426
431
|
'@jbrowse/display-kit/foundationDisplayPhase',
|
|
427
432
|
'@jbrowse/display-kit/foundationPaintInert',
|
|
428
433
|
'@jbrowse/display-kit/foundationSvgReady',
|
|
@@ -464,6 +469,8 @@ export default [
|
|
|
464
469
|
'@jbrowse/display-kit/rowColorConfigSchema',
|
|
465
470
|
'@jbrowse/display-kit/rowsConfigSchema',
|
|
466
471
|
'@jbrowse/display-kit/rpcArgs',
|
|
472
|
+
'@jbrowse/display-kit/sampleRowsConfigSchema',
|
|
473
|
+
'@jbrowse/display-kit/sectionFacetConfigSchema',
|
|
467
474
|
'@jbrowse/display-kit/SkippedFeaturesIndicator',
|
|
468
475
|
'@jbrowse/display-kit/SolidColorDialog',
|
|
469
476
|
'@jbrowse/display-kit/stableIdentityComputed',
|
|
@@ -502,6 +509,7 @@ export default [
|
|
|
502
509
|
'@jbrowse/render-core/installUpload',
|
|
503
510
|
'@jbrowse/render-core/instanceCache',
|
|
504
511
|
'@jbrowse/render-core/instancePass',
|
|
512
|
+
'@jbrowse/render-core/linkFeet',
|
|
505
513
|
'@jbrowse/render-core/marks',
|
|
506
514
|
'@jbrowse/render-core/marks/backend',
|
|
507
515
|
'@jbrowse/render-core/marks/colorFill',
|
|
@@ -526,8 +534,9 @@ export default [
|
|
|
526
534
|
'@jbrowse/render-core/shaders/clipStrip',
|
|
527
535
|
'@jbrowse/render-core/shaders/clipStripConsts',
|
|
528
536
|
'@jbrowse/render-core/shaders/colorRampLut',
|
|
537
|
+
'@jbrowse/render-core/shaders/connectorMark',
|
|
538
|
+
'@jbrowse/render-core/shaders/connectorMarkConsts',
|
|
529
539
|
'@jbrowse/render-core/shaders/coverageBar',
|
|
530
|
-
'@jbrowse/render-core/shaders/coverageIndicator',
|
|
531
540
|
'@jbrowse/render-core/shaders/coverageInterbase',
|
|
532
541
|
'@jbrowse/render-core/shaders/coverageMod',
|
|
533
542
|
'@jbrowse/render-core/shaders/coverageSnp',
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
export { default } from './names.generated.ts';
|