@jbrowse/core 2.17.0 → 3.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (354) hide show
  1. package/BaseFeatureWidget/BaseFeatureDetail/ArrayValue.d.ts +1 -2
  2. package/BaseFeatureWidget/BaseFeatureDetail/ArrayValue.js +7 -13
  3. package/BaseFeatureWidget/BaseFeatureDetail/Attributes.d.ts +1 -2
  4. package/BaseFeatureWidget/BaseFeatureDetail/Attributes.js +20 -25
  5. package/BaseFeatureWidget/BaseFeatureDetail/BaseCard.d.ts +2 -3
  6. package/BaseFeatureWidget/BaseFeatureDetail/BaseCard.js +3 -7
  7. package/BaseFeatureWidget/BaseFeatureDetail/BasicValue.d.ts +1 -2
  8. package/BaseFeatureWidget/BaseFeatureDetail/BasicValue.js +5 -8
  9. package/BaseFeatureWidget/BaseFeatureDetail/CoreDetails.d.ts +2 -3
  10. package/BaseFeatureWidget/BaseFeatureDetail/CoreDetails.js +7 -10
  11. package/BaseFeatureWidget/BaseFeatureDetail/DataGridDetails.d.ts +1 -2
  12. package/BaseFeatureWidget/BaseFeatureDetail/DataGridDetails.js +25 -55
  13. package/BaseFeatureWidget/BaseFeatureDetail/FeatureDetails.d.ts +3 -4
  14. package/BaseFeatureWidget/BaseFeatureDetail/FeatureDetails.js +16 -34
  15. package/BaseFeatureWidget/BaseFeatureDetail/FieldName.d.ts +1 -2
  16. package/BaseFeatureWidget/BaseFeatureDetail/FieldName.js +2 -6
  17. package/BaseFeatureWidget/BaseFeatureDetail/Position.d.ts +2 -3
  18. package/BaseFeatureWidget/BaseFeatureDetail/Position.js +2 -5
  19. package/BaseFeatureWidget/BaseFeatureDetail/SimpleField.d.ts +1 -2
  20. package/BaseFeatureWidget/BaseFeatureDetail/SimpleField.js +3 -5
  21. package/BaseFeatureWidget/BaseFeatureDetail/UriField.d.ts +1 -2
  22. package/BaseFeatureWidget/BaseFeatureDetail/UriField.js +3 -5
  23. package/BaseFeatureWidget/BaseFeatureDetail/index.d.ts +4 -5
  24. package/BaseFeatureWidget/BaseFeatureDetail/index.js +6 -14
  25. package/BaseFeatureWidget/BaseFeatureDetail/util.js +4 -13
  26. package/BaseFeatureWidget/SequenceFeatureDetails/SequenceContents.d.ts +10 -0
  27. package/BaseFeatureWidget/SequenceFeatureDetails/SequenceContents.js +48 -0
  28. package/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeatureDetails.d.ts +3 -4
  29. package/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeatureDetails.js +33 -41
  30. package/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeaturePanel.d.ts +3 -4
  31. package/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeaturePanel.js +30 -29
  32. package/BaseFeatureWidget/SequenceFeatureDetails/SequenceName.d.ts +8 -0
  33. package/BaseFeatureWidget/SequenceFeatureDetails/SequenceName.js +28 -0
  34. package/BaseFeatureWidget/SequenceFeatureDetails/SequencePanel.d.ts +2 -10
  35. package/BaseFeatureWidget/SequenceFeatureDetails/SequencePanel.js +11 -85
  36. package/BaseFeatureWidget/SequenceFeatureDetails/dialogs/HelpDialog.d.ts +1 -2
  37. package/BaseFeatureWidget/SequenceFeatureDetails/dialogs/HelpDialog.js +6 -25
  38. package/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceDialog.d.ts +3 -4
  39. package/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceDialog.js +11 -46
  40. package/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceFeatureMenu.d.ts +3 -4
  41. package/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceFeatureMenu.js +101 -96
  42. package/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceTypeSelector.d.ts +2 -3
  43. package/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceTypeSelector.js +49 -53
  44. package/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SettingsDialog.d.ts +2 -3
  45. package/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SettingsDialog.js +20 -55
  46. package/BaseFeatureWidget/SequenceFeatureDetails/hooks.d.ts +2 -2
  47. package/BaseFeatureWidget/SequenceFeatureDetails/hooks.js +1 -2
  48. package/BaseFeatureWidget/SequenceFeatureDetails/model.d.ts +2 -56
  49. package/BaseFeatureWidget/SequenceFeatureDetails/model.js +4 -66
  50. package/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDNASequence.d.ts +4 -5
  51. package/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDNASequence.js +6 -9
  52. package/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDSSequence.d.ts +3 -4
  53. package/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDSSequence.js +6 -7
  54. package/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/GenomicSequence.d.ts +3 -4
  55. package/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/GenomicSequence.js +5 -9
  56. package/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/ProteinSequence.d.ts +3 -4
  57. package/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/ProteinSequence.js +2 -4
  58. package/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/SequenceDisplay.d.ts +2 -3
  59. package/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/SequenceDisplay.js +3 -10
  60. package/BaseFeatureWidget/SequenceFeatureDetails/types.d.ts +8 -0
  61. package/BaseFeatureWidget/SequenceFeatureDetails/types.js +2 -0
  62. package/BaseFeatureWidget/SequenceFeatureDetails/util.js +1 -5
  63. package/BaseFeatureWidget/stateModelFactory.d.ts +2 -93
  64. package/BaseFeatureWidget/stateModelFactory.js +3 -73
  65. package/BaseFeatureWidget/types.d.ts +3 -3
  66. package/BaseFeatureWidget/util.js +0 -4
  67. package/CorePlugin.d.ts +1 -1
  68. package/CorePlugin.js +19 -12
  69. package/Plugin.d.ts +2 -5
  70. package/Plugin.js +0 -3
  71. package/PluginLoader.d.ts +1 -1
  72. package/PluginLoader.js +2 -19
  73. package/PluginManager.d.ts +17 -32
  74. package/PluginManager.js +15 -41
  75. package/ReExports/DataGrid.js +0 -1
  76. package/ReExports/list.d.ts +0 -5
  77. package/ReExports/list.js +3 -5
  78. package/ReExports/modules.d.ts +26 -22
  79. package/ReExports/modules.js +45 -44
  80. package/TextSearch/BaseResults.d.ts +4 -4
  81. package/TextSearch/TextSearchManager.d.ts +4 -16
  82. package/TextSearch/TextSearchManager.js +1 -13
  83. package/assemblyManager/assembly.d.ts +5 -100
  84. package/assemblyManager/assembly.js +30 -146
  85. package/assemblyManager/assemblyConfigSchema.d.ts +1 -34
  86. package/assemblyManager/assemblyConfigSchema.js +12 -46
  87. package/assemblyManager/assemblyManager.d.ts +7 -57
  88. package/assemblyManager/assemblyManager.js +2 -57
  89. package/configuration/configurationSchema.d.ts +4 -4
  90. package/configuration/configurationSchema.js +2 -14
  91. package/configuration/configurationSlot.d.ts +2 -13
  92. package/configuration/configurationSlot.js +2 -32
  93. package/configuration/index.d.ts +2 -2
  94. package/configuration/index.js +2 -2
  95. package/configuration/types.d.ts +2 -3
  96. package/configuration/util.d.ts +1 -25
  97. package/configuration/util.js +19 -56
  98. package/data_adapters/BaseAdapter/BaseAdapter.d.ts +4 -14
  99. package/data_adapters/BaseAdapter/BaseAdapter.js +1 -10
  100. package/data_adapters/BaseAdapter/BaseFeatureDataAdapter.d.ts +5 -114
  101. package/data_adapters/BaseAdapter/BaseFeatureDataAdapter.js +3 -79
  102. package/data_adapters/BaseAdapter/BaseOptions.d.ts +2 -2
  103. package/data_adapters/BaseAdapter/BaseRefNameAliasAdapter.d.ts +2 -2
  104. package/data_adapters/BaseAdapter/BaseSequenceAdapter.d.ts +3 -6
  105. package/data_adapters/BaseAdapter/BaseTextSearchAdapter.d.ts +3 -3
  106. package/data_adapters/BaseAdapter/RegionsAdapter.d.ts +3 -3
  107. package/data_adapters/BaseAdapter/index.d.ts +4 -4
  108. package/data_adapters/BaseAdapter/types.d.ts +2 -2
  109. package/data_adapters/BaseAdapter/util.d.ts +6 -6
  110. package/data_adapters/CytobandAdapter/CytobandAdapter.d.ts +1 -1
  111. package/data_adapters/CytobandAdapter/CytobandAdapter.js +2 -6
  112. package/data_adapters/CytobandAdapter/configSchema.d.ts +0 -3
  113. package/data_adapters/CytobandAdapter/configSchema.js +1 -7
  114. package/data_adapters/CytobandAdapter/index.d.ts +1 -1
  115. package/data_adapters/CytobandAdapter/index.js +21 -8
  116. package/data_adapters/dataAdapterCache.d.ts +4 -22
  117. package/data_adapters/dataAdapterCache.js +2 -28
  118. package/data_adapters/util.d.ts +1 -0
  119. package/data_adapters/util.js +10 -0
  120. package/package.json +8 -11
  121. package/pluggableElementTypes/AdapterType.d.ts +2 -2
  122. package/pluggableElementTypes/AddTrackWorkflowType.d.ts +2 -2
  123. package/pluggableElementTypes/ConnectionType.d.ts +3 -3
  124. package/pluggableElementTypes/DisplayType.d.ts +3 -9
  125. package/pluggableElementTypes/InternetAccountType.d.ts +2 -2
  126. package/pluggableElementTypes/PluggableElementBase.d.ts +1 -1
  127. package/pluggableElementTypes/PluggableElementBase.js +2 -2
  128. package/pluggableElementTypes/RpcMethodType.d.ts +5 -11
  129. package/pluggableElementTypes/RpcMethodType.js +7 -19
  130. package/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions.d.ts +9 -0
  131. package/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions.js +35 -0
  132. package/pluggableElementTypes/TextSearchAdapterType.d.ts +2 -2
  133. package/pluggableElementTypes/TrackType.d.ts +3 -3
  134. package/pluggableElementTypes/ViewType.d.ts +3 -3
  135. package/pluggableElementTypes/WidgetType.d.ts +4 -3
  136. package/pluggableElementTypes/index.d.ts +11 -11
  137. package/pluggableElementTypes/models/BaseConnectionModelFactory.d.ts +2 -29
  138. package/pluggableElementTypes/models/BaseConnectionModelFactory.js +1 -28
  139. package/pluggableElementTypes/models/BaseDisplayModel.d.ts +3 -83
  140. package/pluggableElementTypes/models/BaseDisplayModel.js +2 -69
  141. package/pluggableElementTypes/models/BaseTrackModel.d.ts +4 -46
  142. package/pluggableElementTypes/models/BaseTrackModel.js +9 -63
  143. package/pluggableElementTypes/models/BaseViewModel.d.ts +2 -42
  144. package/pluggableElementTypes/models/BaseViewModel.js +2 -38
  145. package/pluggableElementTypes/models/InternetAccountModel.d.ts +3 -119
  146. package/pluggableElementTypes/models/InternetAccountModel.js +3 -123
  147. package/pluggableElementTypes/models/baseConnectionConfig.d.ts +0 -6
  148. package/pluggableElementTypes/models/baseConnectionConfig.js +1 -13
  149. package/pluggableElementTypes/models/baseInternetAccountConfig.d.ts +0 -15
  150. package/pluggableElementTypes/models/baseInternetAccountConfig.js +1 -23
  151. package/pluggableElementTypes/models/baseTrackConfig.d.ts +2 -53
  152. package/pluggableElementTypes/models/baseTrackConfig.js +1 -58
  153. package/pluggableElementTypes/renderers/BoxRendererType.d.ts +7 -15
  154. package/pluggableElementTypes/renderers/BoxRendererType.js +3 -14
  155. package/pluggableElementTypes/renderers/CircularChordRendererType.d.ts +4 -4
  156. package/pluggableElementTypes/renderers/CircularChordRendererType.js +3 -8
  157. package/pluggableElementTypes/renderers/ComparativeServerSideRendererType.d.ts +6 -21
  158. package/pluggableElementTypes/renderers/ComparativeServerSideRendererType.js +2 -25
  159. package/pluggableElementTypes/renderers/FeatureRendererType.d.ts +5 -47
  160. package/pluggableElementTypes/renderers/FeatureRendererType.js +15 -68
  161. package/pluggableElementTypes/renderers/RendererType.d.ts +5 -9
  162. package/pluggableElementTypes/renderers/RendererType.js +3 -7
  163. package/pluggableElementTypes/renderers/RpcRenderedSvgGroup.d.ts +3 -4
  164. package/pluggableElementTypes/renderers/RpcRenderedSvgGroup.js +11 -76
  165. package/pluggableElementTypes/renderers/ServerSideRenderedContent.d.ts +2 -3
  166. package/pluggableElementTypes/renderers/ServerSideRenderedContent.js +10 -74
  167. package/pluggableElementTypes/renderers/ServerSideRendererType.d.ts +9 -49
  168. package/pluggableElementTypes/renderers/ServerSideRendererType.js +10 -60
  169. package/pluggableElementTypes/renderers/index.d.ts +1 -1
  170. package/pluggableElementTypes/renderers/util/serializableFilterChain.js +1 -3
  171. package/rpc/BaseRpcDriver.d.ts +3 -4
  172. package/rpc/BaseRpcDriver.js +20 -80
  173. package/rpc/MainThreadRpcDriver.d.ts +3 -7
  174. package/rpc/MainThreadRpcDriver.js +0 -5
  175. package/rpc/RpcManager.d.ts +3 -3
  176. package/rpc/RpcManager.js +2 -4
  177. package/rpc/WebWorkerRpcDriver.d.ts +3 -2
  178. package/rpc/WebWorkerRpcDriver.js +2 -13
  179. package/rpc/baseRpcConfig.d.ts +0 -3
  180. package/rpc/baseRpcConfig.js +1 -7
  181. package/rpc/configSchema.d.ts +0 -6
  182. package/rpc/configSchema.js +2 -11
  183. package/rpc/mainThreadRpcConfig.js +1 -7
  184. package/rpc/methods/CoreFreeResources.d.ts +0 -6
  185. package/rpc/methods/CoreFreeResources.js +2 -9
  186. package/rpc/methods/CoreGetFeatureDensityStats.d.ts +4 -5
  187. package/rpc/methods/CoreGetFeatureDensityStats.js +1 -1
  188. package/rpc/methods/CoreGetFeatureDetails.d.ts +2 -7
  189. package/rpc/methods/CoreGetFeatureDetails.js +0 -5
  190. package/rpc/methods/CoreGetFeatures.d.ts +5 -5
  191. package/rpc/methods/CoreGetFeatures.js +4 -5
  192. package/rpc/methods/CoreGetFileInfo.d.ts +1 -2
  193. package/rpc/methods/CoreGetFileInfo.js +1 -1
  194. package/rpc/methods/CoreGetMetadata.d.ts +1 -2
  195. package/rpc/methods/CoreGetMetadata.js +1 -1
  196. package/rpc/methods/CoreGetRefNames.d.ts +1 -2
  197. package/rpc/methods/CoreGetRefNames.js +1 -1
  198. package/rpc/methods/CoreRender.d.ts +2 -6
  199. package/rpc/methods/CoreRender.js +5 -7
  200. package/rpc/methods/util.d.ts +3 -3
  201. package/rpc/methods/util.js +0 -1
  202. package/rpc/webWorkerRpcConfig.js +1 -7
  203. package/stories/JBrowseCore.stories.d.ts +1 -1
  204. package/stories/JBrowseCore.stories.js +3 -3
  205. package/stories/examples/WithSequencePanel.d.ts +6 -7
  206. package/stories/examples/WithSequencePanel.js +9 -9
  207. package/tsconfig.build.tsbuildinfo +1 -1
  208. package/ui/AppLogo.d.ts +2 -3
  209. package/ui/AppLogo.js +2 -7
  210. package/ui/AssemblySelector.d.ts +5 -5
  211. package/ui/AssemblySelector.js +11 -36
  212. package/ui/BaseTooltip.d.ts +1 -2
  213. package/ui/BaseTooltip.js +10 -17
  214. package/ui/CascadingMenu.d.ts +3 -4
  215. package/ui/CascadingMenu.js +18 -57
  216. package/ui/CascadingMenuButton.d.ts +2 -3
  217. package/ui/CascadingMenuButton.js +18 -42
  218. package/ui/ColorPicker.d.ts +3 -4
  219. package/ui/ColorPicker.js +33 -37
  220. package/ui/Dialog.d.ts +2 -3
  221. package/ui/Dialog.js +15 -27
  222. package/ui/DraggableDialog.d.ts +5 -0
  223. package/ui/DraggableDialog.js +32 -0
  224. package/ui/DropDownMenu.d.ts +2 -3
  225. package/ui/DropDownMenu.js +10 -36
  226. package/ui/EditableTypography.d.ts +2 -3
  227. package/ui/EditableTypography.js +30 -59
  228. package/ui/ErrorBoundary.d.ts +3 -2
  229. package/ui/ErrorBoundary.js +3 -25
  230. package/ui/ErrorMessage.d.ts +1 -2
  231. package/ui/ErrorMessage.js +27 -34
  232. package/ui/ErrorMessageStackTraceDialog.d.ts +1 -2
  233. package/ui/ErrorMessageStackTraceDialog.js +13 -54
  234. package/ui/FactoryResetDialog.d.ts +1 -2
  235. package/ui/FactoryResetDialog.js +8 -13
  236. package/ui/FatalErrorDialog.d.ts +1 -2
  237. package/ui/FatalErrorDialog.js +11 -42
  238. package/ui/FileSelector/FileSelector.d.ts +5 -5
  239. package/ui/FileSelector/FileSelector.js +41 -80
  240. package/ui/FileSelector/LocalFileChooser.d.ts +2 -3
  241. package/ui/FileSelector/LocalFileChooser.js +17 -29
  242. package/ui/FileSelector/UrlChooser.d.ts +5 -5
  243. package/ui/FileSelector/UrlChooser.js +6 -7
  244. package/ui/Icons.d.ts +10 -11
  245. package/ui/Icons.js +10 -25
  246. package/ui/LoadingEllipses.d.ts +2 -3
  247. package/ui/LoadingEllipses.js +4 -7
  248. package/ui/Logo.d.ts +2 -3
  249. package/ui/Logo.js +5 -23
  250. package/ui/Menu.d.ts +3 -4
  251. package/ui/Menu.js +85 -122
  252. package/ui/MenuButton.d.ts +2 -3
  253. package/ui/MenuButton.js +11 -35
  254. package/ui/PrerenderedCanvas.d.ts +1 -2
  255. package/ui/PrerenderedCanvas.js +3 -25
  256. package/ui/RedErrorMessageBox.d.ts +1 -2
  257. package/ui/RedErrorMessageBox.js +2 -5
  258. package/ui/ResizeHandle.d.ts +1 -2
  259. package/ui/ResizeHandle.js +5 -27
  260. package/ui/ReturnToImportFormDialog.d.ts +1 -2
  261. package/ui/ReturnToImportFormDialog.js +8 -13
  262. package/ui/SanitizedHTML.d.ts +2 -3
  263. package/ui/SanitizedHTML.js +4 -24
  264. package/ui/Snackbar.d.ts +3 -4
  265. package/ui/Snackbar.js +41 -21
  266. package/ui/SnackbarContents.d.ts +5 -0
  267. package/ui/SnackbarContents.js +16 -0
  268. package/ui/SnackbarModel.d.ts +1 -26
  269. package/ui/SnackbarModel.js +22 -39
  270. package/ui/colors.d.ts +1 -1
  271. package/ui/colors.js +2 -2
  272. package/ui/index.d.ts +0 -2
  273. package/ui/index.js +1 -5
  274. package/ui/react-colorful.js +17 -10
  275. package/ui/theme.d.ts +1 -1
  276. package/ui/theme.js +7 -40
  277. package/util/Base1DUtils.d.ts +1 -1
  278. package/util/Base1DUtils.js +0 -12
  279. package/util/Base1DViewModel.d.ts +4 -81
  280. package/util/Base1DViewModel.js +4 -108
  281. package/util/QuickLRU.js +0 -9
  282. package/util/TimeTraveller.js +0 -4
  283. package/util/aborting.d.ts +0 -20
  284. package/util/aborting.js +0 -31
  285. package/util/analytics.js +1 -12
  286. package/util/blockTypes.d.ts +0 -11
  287. package/util/blockTypes.js +0 -13
  288. package/util/calculateDynamicBlocks.d.ts +1 -20
  289. package/util/calculateDynamicBlocks.js +1 -22
  290. package/util/calculateStaticBlocks.d.ts +2 -2
  291. package/util/calculateStaticBlocks.js +0 -2
  292. package/util/color/cssColorsLevel4.js +0 -1
  293. package/util/color/index.d.ts +0 -19
  294. package/util/color/index.js +0 -30
  295. package/util/compositeMap.js +0 -2
  296. package/util/dedupe.js +0 -1
  297. package/util/formatFastaStrings.d.ts +0 -13
  298. package/util/formatFastaStrings.js +0 -13
  299. package/util/idMaker.d.ts +1 -1
  300. package/util/idMaker.js +16 -12
  301. package/util/index.d.ts +27 -173
  302. package/util/index.js +53 -293
  303. package/util/io/RemoteFileWithRangeCache.d.ts +4 -5
  304. package/util/io/RemoteFileWithRangeCache.js +12 -14
  305. package/util/io/index.d.ts +3 -4
  306. package/util/io/index.js +5 -19
  307. package/util/jexl.js +3 -13
  308. package/util/jexlStrings.d.ts +0 -6
  309. package/util/jexlStrings.js +0 -8
  310. package/util/layouts/BaseLayout.d.ts +1 -1
  311. package/util/layouts/GranularRectLayout.d.ts +1 -17
  312. package/util/layouts/GranularRectLayout.js +4 -81
  313. package/util/layouts/MultiLayout.d.ts +1 -6
  314. package/util/layouts/MultiLayout.js +0 -6
  315. package/util/layouts/PrecomputedLayout.d.ts +1 -4
  316. package/util/layouts/PrecomputedLayout.js +0 -5
  317. package/util/layouts/PrecomputedMultiLayout.js +0 -2
  318. package/util/layouts/SceneGraph.d.ts +0 -12
  319. package/util/layouts/SceneGraph.js +0 -13
  320. package/util/makeAbortableReaction.d.ts +2 -0
  321. package/util/makeAbortableReaction.js +50 -0
  322. package/util/map-obj.js +0 -4
  323. package/util/mst-reflection.d.ts +1 -14
  324. package/util/mst-reflection.js +1 -28
  325. package/util/nanoid.d.ts +1 -1
  326. package/util/nanoid.js +0 -31
  327. package/util/nextTick.d.ts +1 -0
  328. package/util/nextTick.js +6 -0
  329. package/util/offscreenCanvasPonyfill.d.ts +0 -1
  330. package/util/offscreenCanvasPonyfill.js +1 -9
  331. package/util/offscreenCanvasUtils.d.ts +2 -3
  332. package/util/offscreenCanvasUtils.js +22 -21
  333. package/util/range.d.ts +0 -25
  334. package/util/range.js +0 -34
  335. package/util/rxjs.d.ts +3 -7
  336. package/util/rxjs.js +2 -9
  337. package/util/simpleFeature.d.ts +0 -50
  338. package/util/simpleFeature.js +0 -35
  339. package/util/stats.d.ts +3 -26
  340. package/util/stats.js +0 -25
  341. package/util/stopToken.d.ts +3 -0
  342. package/util/stopToken.js +29 -0
  343. package/util/tracks.d.ts +4 -26
  344. package/util/tracks.js +8 -33
  345. package/util/types/index.d.ts +14 -30
  346. package/util/types/index.js +5 -14
  347. package/util/types/mst.js +0 -9
  348. package/util/types/util.d.ts +2 -9
  349. package/util/useMeasure.d.ts +1 -1
  350. package/util/useMeasure.js +0 -1
  351. package/util/when.d.ts +1 -15
  352. package/util/when.js +3 -70
  353. package/rpc/remoteAbortSignals.d.ts +0 -36
  354. package/rpc/remoteAbortSignals.js +0 -79
package/ui/Dialog.js CHANGED
@@ -3,14 +3,13 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
3
3
  return (mod && mod.__esModule) ? mod : { "default": mod };
4
4
  };
5
5
  Object.defineProperty(exports, "__esModule", { value: true });
6
- const react_1 = __importDefault(require("react"));
6
+ const jsx_runtime_1 = require("react/jsx-runtime");
7
+ const react_1 = require("react");
8
+ const ErrorBoundary_1 = require("@jbrowse/core/ui/ErrorBoundary");
9
+ const Close_1 = __importDefault(require("@mui/icons-material/Close"));
7
10
  const material_1 = require("@mui/material");
8
11
  const mobx_react_1 = require("mobx-react");
9
12
  const mui_1 = require("tss-react/mui");
10
- const ErrorBoundary_1 = require("@jbrowse/core/ui/ErrorBoundary");
11
- // icons
12
- const Close_1 = __importDefault(require("@mui/icons-material/Close"));
13
- // locals
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  const ErrorMessage_1 = __importDefault(require("./ErrorMessage"));
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  const SanitizedHTML_1 = __importDefault(require("./SanitizedHTML"));
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15
  const useStyles = (0, mui_1.makeStyles)()(theme => ({
@@ -22,35 +21,24 @@ const useStyles = (0, mui_1.makeStyles)()(theme => ({
22
21
  },
23
22
  }));
24
23
  function DialogError({ error }) {
25
- return (react_1.default.createElement("div", { style: { width: 800, margin: 40 } },
26
- react_1.default.createElement(ErrorMessage_1.default, { error: error })));
24
+ return ((0, jsx_runtime_1.jsx)("div", { style: { width: 800, margin: 40 }, children: (0, jsx_runtime_1.jsx)(ErrorMessage_1.default, { error: error }) }));
27
25
  }
28
26
  const Dialog = (0, mobx_react_1.observer)(function (props) {
29
27
  const { classes } = useStyles();
30
28
  const { title, header, children, onClose } = props;
31
29
  const theme = (0, material_1.useTheme)();
32
- return (react_1.default.createElement(material_1.Dialog, { ...props },
33
- react_1.default.createElement(material_1.ScopedCssBaseline, null,
34
- react_1.default.isValidElement(header) ? (header) : (react_1.default.createElement(material_1.DialogTitle, null,
35
- react_1.default.createElement(SanitizedHTML_1.default, { html: title || '' }),
36
- onClose ? (react_1.default.createElement(material_1.IconButton, { className: classes.closeButton, onClick: () => {
37
- // @ts-expect-error
38
- onClose();
39
- } },
40
- react_1.default.createElement(Close_1.default, null))) : null)),
41
- react_1.default.createElement(material_1.Divider, null),
42
- react_1.default.createElement(ErrorBoundary_1.ErrorBoundary, { FallbackComponent: DialogError },
43
- react_1.default.createElement(material_1.ThemeProvider, { theme: (0, material_1.createTheme)(theme, {
44
- components: {
45
- MuiInputBase: {
46
- styleOverrides: {
47
- input: {
48
- // xref https://github.com/GMOD/jbrowse-components/pull/3666
49
- boxSizing: 'content-box!important',
30
+ return ((0, jsx_runtime_1.jsx)(material_1.Dialog, { ...props, children: (0, jsx_runtime_1.jsxs)(material_1.ScopedCssBaseline, { children: [(0, react_1.isValidElement)(header) ? (header) : ((0, jsx_runtime_1.jsxs)(material_1.DialogTitle, { children: [(0, jsx_runtime_1.jsx)(SanitizedHTML_1.default, { html: title || '' }), onClose ? ((0, jsx_runtime_1.jsx)(material_1.IconButton, { className: classes.closeButton, onClick: () => {
31
+ onClose();
32
+ }, children: (0, jsx_runtime_1.jsx)(Close_1.default, {}) })) : null] })), (0, jsx_runtime_1.jsx)(material_1.Divider, {}), (0, jsx_runtime_1.jsx)(ErrorBoundary_1.ErrorBoundary, { FallbackComponent: DialogError, children: (0, jsx_runtime_1.jsx)(material_1.ThemeProvider, { theme: (0, material_1.createTheme)(theme, {
33
+ components: {
34
+ MuiInputBase: {
35
+ styleOverrides: {
36
+ input: {
37
+ boxSizing: 'content-box!important',
38
+ },
50
39
  },
51
40
  },
52
41
  },
53
- },
54
- }) }, children)))));
42
+ }), children: children }) })] }) }));
55
43
  });
56
44
  exports.default = Dialog;
@@ -0,0 +1,5 @@
1
+ import type { DialogProps } from '@mui/material';
2
+ declare const DraggableDialog: (props: DialogProps & {
3
+ title: string;
4
+ }) => import("react/jsx-runtime").JSX.Element;
5
+ export default DraggableDialog;
@@ -0,0 +1,32 @@
1
+ "use strict";
2
+ var __importDefault = (this && this.__importDefault) || function (mod) {
3
+ return (mod && mod.__esModule) ? mod : { "default": mod };
4
+ };
5
+ Object.defineProperty(exports, "__esModule", { value: true });
6
+ const jsx_runtime_1 = require("react/jsx-runtime");
7
+ const react_1 = require("react");
8
+ const Close_1 = __importDefault(require("@mui/icons-material/Close"));
9
+ const material_1 = require("@mui/material");
10
+ const mobx_react_1 = require("mobx-react");
11
+ const react_draggable_1 = __importDefault(require("react-draggable"));
12
+ const mui_1 = require("tss-react/mui");
13
+ const useStyles = (0, mui_1.makeStyles)()(theme => ({
14
+ closeButton: {
15
+ position: 'absolute',
16
+ right: theme.spacing(1),
17
+ top: theme.spacing(1),
18
+ color: theme.palette.grey[500],
19
+ },
20
+ }));
21
+ function PaperComponent(props) {
22
+ const ref = (0, react_1.useRef)(null);
23
+ return ((0, jsx_runtime_1.jsx)(react_draggable_1.default, { nodeRef: ref, cancel: '[class*="MuiDialogContent-root"]', onStart: arg => { var _a; return `${(_a = arg.target) === null || _a === void 0 ? void 0 : _a.className}`.includes('MuiDialogTitle'); }, children: (0, jsx_runtime_1.jsx)(material_1.Paper, { ref: ref, ...props }) }));
24
+ }
25
+ const DraggableDialog = (0, mobx_react_1.observer)(function DraggableDialog(props) {
26
+ const { classes } = useStyles();
27
+ const { title, children, onClose } = props;
28
+ return ((0, jsx_runtime_1.jsx)(material_1.Dialog, { ...props, PaperComponent: PaperComponent, children: (0, jsx_runtime_1.jsxs)(material_1.ScopedCssBaseline, { children: [(0, jsx_runtime_1.jsxs)(material_1.DialogTitle, { style: { cursor: 'move' }, children: [title, onClose ? ((0, jsx_runtime_1.jsx)(material_1.IconButton, { className: classes.closeButton, onClick: () => {
29
+ onClose();
30
+ }, children: (0, jsx_runtime_1.jsx)(Close_1.default, {}) })) : null] }), (0, jsx_runtime_1.jsx)(material_1.Divider, {}), children] }) }));
31
+ });
32
+ exports.default = DraggableDialog;
@@ -1,8 +1,7 @@
1
- import React from 'react';
2
- import { MenuItem } from './Menu';
1
+ import type { MenuItem } from './Menu';
3
2
  declare const DropDownMenu: ({ menuTitle, session, menuItems, }: {
4
3
  menuTitle: string;
5
4
  session: any;
6
5
  menuItems: MenuItem[];
7
- }) => React.JSX.Element;
6
+ }) => import("react/jsx-runtime").JSX.Element;
8
7
  export default DropDownMenu;
@@ -1,36 +1,14 @@
1
1
  "use strict";
2
- var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
3
- if (k2 === undefined) k2 = k;
4
- var desc = Object.getOwnPropertyDescriptor(m, k);
5
- if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
6
- desc = { enumerable: true, get: function() { return m[k]; } };
7
- }
8
- Object.defineProperty(o, k2, desc);
9
- }) : (function(o, m, k, k2) {
10
- if (k2 === undefined) k2 = k;
11
- o[k2] = m[k];
12
- }));
13
- var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
14
- Object.defineProperty(o, "default", { enumerable: true, value: v });
15
- }) : function(o, v) {
16
- o["default"] = v;
17
- });
18
- var __importStar = (this && this.__importStar) || function (mod) {
19
- if (mod && mod.__esModule) return mod;
20
- var result = {};
21
- if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
22
- __setModuleDefault(result, mod);
23
- return result;
24
- };
25
2
  var __importDefault = (this && this.__importDefault) || function (mod) {
26
3
  return (mod && mod.__esModule) ? mod : { "default": mod };
27
4
  };
28
5
  Object.defineProperty(exports, "__esModule", { value: true });
29
- const react_1 = __importStar(require("react"));
6
+ const jsx_runtime_1 = require("react/jsx-runtime");
7
+ const react_1 = require("react");
8
+ const ArrowDropDown_1 = __importDefault(require("@mui/icons-material/ArrowDropDown"));
30
9
  const material_1 = require("@mui/material");
31
- const mui_1 = require("tss-react/mui");
32
10
  const mobx_react_1 = require("mobx-react");
33
- const ArrowDropDown_1 = __importDefault(require("@mui/icons-material/ArrowDropDown"));
11
+ const mui_1 = require("tss-react/mui");
34
12
  const Menu_1 = __importDefault(require("./Menu"));
35
13
  const useStyles = (0, mui_1.makeStyles)()(theme => ({
36
14
  buttonRoot: {
@@ -49,15 +27,11 @@ const DropDownMenu = (0, mobx_react_1.observer)(function ({ menuTitle, session,
49
27
  function handleClose() {
50
28
  setOpen(false);
51
29
  }
52
- return (react_1.default.createElement(react_1.default.Fragment, null,
53
- react_1.default.createElement(material_1.Button, { ref: anchorEl, onClick: () => {
54
- setOpen(!open);
55
- }, color: "inherit", "data-testid": "dropDownMenuButton", classes: { root: classes.buttonRoot } },
56
- menuTitle,
57
- react_1.default.createElement(ArrowDropDown_1.default, null)),
58
- react_1.default.createElement(Menu_1.default, { anchorEl: anchorEl.current, anchorOrigin: { vertical: 'bottom', horizontal: 'left' }, onMenuItemClick: (_event, callback) => {
59
- callback(session);
60
- handleClose();
61
- }, open: open, onClose: handleClose, menuItems: menuItems })));
30
+ return ((0, jsx_runtime_1.jsxs)(jsx_runtime_1.Fragment, { children: [(0, jsx_runtime_1.jsxs)(material_1.Button, { ref: anchorEl, onClick: () => {
31
+ setOpen(!open);
32
+ }, color: "inherit", "data-testid": "dropDownMenuButton", classes: { root: classes.buttonRoot }, children: [menuTitle, (0, jsx_runtime_1.jsx)(ArrowDropDown_1.default, {})] }), (0, jsx_runtime_1.jsx)(Menu_1.default, { anchorEl: anchorEl.current, anchorOrigin: { vertical: 'bottom', horizontal: 'left' }, onMenuItemClick: (_event, callback) => {
33
+ callback(session);
34
+ handleClose();
35
+ }, open: open, onClose: handleClose, menuItems: menuItems })] }));
62
36
  });
63
37
  exports.default = DropDownMenu;
@@ -1,5 +1,4 @@
1
- import React from 'react';
2
- import { TypographyProps } from '@mui/material';
1
+ import type { TypographyProps } from '@mui/material';
3
2
  type Variant = TypographyProps['variant'];
4
3
  type EditableTypographyClassKey = 'input' | 'inputBase' | 'inputRoot' | 'inputFocused';
5
4
  interface Props {
@@ -8,5 +7,5 @@ interface Props {
8
7
  variant: Variant;
9
8
  classes?: Partial<Record<EditableTypographyClassKey, string>>;
10
9
  }
11
- declare const EditableTypography: React.ForwardRefExoticComponent<Props & React.RefAttributes<HTMLDivElement>>;
10
+ declare const EditableTypography: import("react").ForwardRefExoticComponent<Props & import("react").RefAttributes<HTMLDivElement>>;
12
11
  export default EditableTypography;
@@ -1,35 +1,13 @@
1
1
  "use strict";
2
- var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
3
- if (k2 === undefined) k2 = k;
4
- var desc = Object.getOwnPropertyDescriptor(m, k);
5
- if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
6
- desc = { enumerable: true, get: function() { return m[k]; } };
7
- }
8
- Object.defineProperty(o, k2, desc);
9
- }) : (function(o, m, k, k2) {
10
- if (k2 === undefined) k2 = k;
11
- o[k2] = m[k];
12
- }));
13
- var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
14
- Object.defineProperty(o, "default", { enumerable: true, value: v });
15
- }) : function(o, v) {
16
- o["default"] = v;
17
- });
18
- var __importStar = (this && this.__importStar) || function (mod) {
19
- if (mod && mod.__esModule) return mod;
20
- var result = {};
21
- if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
22
- __setModuleDefault(result, mod);
23
- return result;
24
- };
25
2
  var __importDefault = (this && this.__importDefault) || function (mod) {
26
3
  return (mod && mod.__esModule) ? mod : { "default": mod };
27
4
  };
28
5
  Object.defineProperty(exports, "__esModule", { value: true });
29
- const react_1 = __importStar(require("react"));
6
+ const jsx_runtime_1 = require("react/jsx-runtime");
7
+ const react_1 = require("react");
8
+ const useMeasure_1 = __importDefault(require("@jbrowse/core/util/useMeasure"));
30
9
  const material_1 = require("@mui/material");
31
10
  const mui_1 = require("tss-react/mui");
32
- const useMeasure_1 = __importDefault(require("@jbrowse/core/util/useMeasure"));
33
11
  const useStyles = (0, mui_1.makeStyles)()(theme => ({
34
12
  input: {},
35
13
  inputBase: {},
@@ -48,8 +26,7 @@ const useStyles = (0, mui_1.makeStyles)()(theme => ({
48
26
  borderWidth: 2,
49
27
  },
50
28
  }));
51
- // using forwardRef so that MUI Tooltip can wrap this component
52
- const EditableTypography = react_1.default.forwardRef(function EditableTypography2(props, ref) {
29
+ const EditableTypography = (0, react_1.forwardRef)(function EditableTypography2(props, ref) {
53
30
  const { value, setValue, variant, ...other } = props;
54
31
  const [ref2, { width }] = (0, useMeasure_1.default)();
55
32
  const [editedValue, setEditedValue] = (0, react_1.useState)();
@@ -61,41 +38,35 @@ const EditableTypography = react_1.default.forwardRef(function EditableTypograph
61
38
  setBlur(false);
62
39
  }
63
40
  }, [blur, inputNode]);
64
- // possibly tss-react does not understand the passing of props to
65
- // useStyles, but it appears to work
66
- // @ts-expect-error
67
41
  const { classes } = useStyles(props, { props });
68
42
  const theme = (0, material_1.useTheme)();
69
43
  const val = editedValue === undefined ? value : editedValue;
70
- return (react_1.default.createElement("div", { ...other, ref: ref },
71
- react_1.default.createElement("div", { style: { position: 'relative' } },
72
- react_1.default.createElement(material_1.Typography, { ref: ref2, component: "span", variant: variant, className: classes.typography }, val)),
73
- react_1.default.createElement(material_1.InputBase, { inputRef: node => {
74
- setInputNode(node);
75
- }, className: classes.inputBase, inputProps: {
76
- style: {
77
- width,
78
- ...(variant && variant !== 'inherit'
79
- ? theme.typography[variant]
80
- : {}),
81
- },
82
- }, classes: {
83
- input: classes.input,
84
- root: classes.inputRoot,
85
- focused: classes.inputFocused,
86
- }, value: val, onChange: event => {
87
- setEditedValue(event.target.value);
88
- }, onKeyDown: event => {
89
- if (event.key === 'Enter') {
90
- inputNode === null || inputNode === void 0 ? void 0 : inputNode.blur();
91
- }
92
- else if (event.key === 'Escape') {
44
+ return ((0, jsx_runtime_1.jsxs)("div", { ...other, ref: ref, children: [(0, jsx_runtime_1.jsx)("div", { style: { position: 'relative' }, children: (0, jsx_runtime_1.jsx)(material_1.Typography, { ref: ref2, component: "span", variant: variant, className: classes.typography, children: val }) }), (0, jsx_runtime_1.jsx)(material_1.InputBase, { inputRef: node => {
45
+ setInputNode(node);
46
+ }, className: classes.inputBase, inputProps: {
47
+ style: {
48
+ width,
49
+ ...(variant && variant !== 'inherit'
50
+ ? theme.typography[variant]
51
+ : {}),
52
+ },
53
+ }, classes: {
54
+ input: classes.input,
55
+ root: classes.inputRoot,
56
+ focused: classes.inputFocused,
57
+ }, value: val, onChange: event => {
58
+ setEditedValue(event.target.value);
59
+ }, onKeyDown: event => {
60
+ if (event.key === 'Enter') {
61
+ inputNode === null || inputNode === void 0 ? void 0 : inputNode.blur();
62
+ }
63
+ else if (event.key === 'Escape') {
64
+ setEditedValue(undefined);
65
+ setBlur(true);
66
+ }
67
+ }, onBlur: () => {
68
+ setValue(editedValue || value || '');
93
69
  setEditedValue(undefined);
94
- setBlur(true);
95
- }
96
- }, onBlur: () => {
97
- setValue(editedValue || value || '');
98
- setEditedValue(undefined);
99
- } })));
70
+ } })] }));
100
71
  });
101
72
  exports.default = EditableTypography;
@@ -1,4 +1,5 @@
1
- import React, { Component, ErrorInfo } from 'react';
1
+ import type { ErrorInfo } from 'react';
2
+ import { Component } from 'react';
2
3
  interface Props {
3
4
  children: React.ReactNode;
4
5
  FallbackComponent: React.FC<{
@@ -11,6 +12,6 @@ interface State {
11
12
  declare class ErrorBoundary extends Component<Props, State> {
12
13
  constructor(props: Props);
13
14
  componentDidCatch(error: Error, errorInfo: ErrorInfo): void;
14
- render(): string | number | boolean | Iterable<React.ReactNode> | React.JSX.Element | null | undefined;
15
+ render(): string | number | bigint | boolean | Iterable<import("react").ReactNode> | Promise<string | number | bigint | boolean | import("react").ReactPortal | import("react").ReactElement<unknown, string | import("react").JSXElementConstructor<any>> | Iterable<import("react").ReactNode> | null | undefined> | import("react/jsx-runtime").JSX.Element | null | undefined;
15
16
  }
16
17
  export { ErrorBoundary };
@@ -1,30 +1,8 @@
1
1
  "use strict";
2
- var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
3
- if (k2 === undefined) k2 = k;
4
- var desc = Object.getOwnPropertyDescriptor(m, k);
5
- if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
6
- desc = { enumerable: true, get: function() { return m[k]; } };
7
- }
8
- Object.defineProperty(o, k2, desc);
9
- }) : (function(o, m, k, k2) {
10
- if (k2 === undefined) k2 = k;
11
- o[k2] = m[k];
12
- }));
13
- var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
14
- Object.defineProperty(o, "default", { enumerable: true, value: v });
15
- }) : function(o, v) {
16
- o["default"] = v;
17
- });
18
- var __importStar = (this && this.__importStar) || function (mod) {
19
- if (mod && mod.__esModule) return mod;
20
- var result = {};
21
- if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
22
- __setModuleDefault(result, mod);
23
- return result;
24
- };
25
2
  Object.defineProperty(exports, "__esModule", { value: true });
26
3
  exports.ErrorBoundary = void 0;
27
- const react_1 = __importStar(require("react"));
4
+ const jsx_runtime_1 = require("react/jsx-runtime");
5
+ const react_1 = require("react");
28
6
  class ErrorBoundary extends react_1.Component {
29
7
  constructor(props) {
30
8
  super(props);
@@ -35,7 +13,7 @@ class ErrorBoundary extends react_1.Component {
35
13
  this.setState({ error });
36
14
  }
37
15
  render() {
38
- return this.state.error ? (react_1.default.createElement(this.props.FallbackComponent, { error: this.state.error })) : (this.props.children);
16
+ return this.state.error ? ((0, jsx_runtime_1.jsx)(this.props.FallbackComponent, { error: this.state.error })) : (this.props.children);
39
17
  }
40
18
  }
41
19
  exports.ErrorBoundary = ErrorBoundary;
@@ -1,6 +1,5 @@
1
- import React from 'react';
2
1
  declare function ErrorMessage({ error, onReset, }: {
3
2
  error: unknown;
4
3
  onReset?: () => void;
5
- }): React.JSX.Element;
4
+ }): import("react/jsx-runtime").JSX.Element;
6
5
  export default ErrorMessage;
@@ -15,26 +15,34 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
15
15
  }) : function(o, v) {
16
16
  o["default"] = v;
17
17
  });
18
- var __importStar = (this && this.__importStar) || function (mod) {
19
- if (mod && mod.__esModule) return mod;
20
- var result = {};
21
- if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
22
- __setModuleDefault(result, mod);
23
- return result;
24
- };
18
+ var __importStar = (this && this.__importStar) || (function () {
19
+ var ownKeys = function(o) {
20
+ ownKeys = Object.getOwnPropertyNames || function (o) {
21
+ var ar = [];
22
+ for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
23
+ return ar;
24
+ };
25
+ return ownKeys(o);
26
+ };
27
+ return function (mod) {
28
+ if (mod && mod.__esModule) return mod;
29
+ var result = {};
30
+ if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
31
+ __setModuleDefault(result, mod);
32
+ return result;
33
+ };
34
+ })();
25
35
  var __importDefault = (this && this.__importDefault) || function (mod) {
26
36
  return (mod && mod.__esModule) ? mod : { "default": mod };
27
37
  };
28
38
  Object.defineProperty(exports, "__esModule", { value: true });
29
- const react_1 = __importStar(require("react"));
39
+ const jsx_runtime_1 = require("react/jsx-runtime");
40
+ const react_1 = require("react");
41
+ const Refresh_1 = __importDefault(require("@mui/icons-material/Refresh"));
42
+ const Report_1 = __importDefault(require("@mui/icons-material/Report"));
30
43
  const material_1 = require("@mui/material");
31
44
  const mui_1 = require("tss-react/mui");
32
- // locals
33
45
  const RedErrorMessageBox_1 = __importDefault(require("./RedErrorMessageBox"));
34
- // icons
35
- const Refresh_1 = __importDefault(require("@mui/icons-material/Refresh"));
36
- const Report_1 = __importDefault(require("@mui/icons-material/Report"));
37
- // lazies
38
46
  const ErrorMessageStackTraceDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./ErrorMessageStackTraceDialog'))));
39
47
  const useStyles = (0, mui_1.makeStyles)()(theme => ({
40
48
  bg: {
@@ -53,15 +61,11 @@ function parseError(str) {
53
61
  const idx = str.indexOf(findStr);
54
62
  if (idx !== -1) {
55
63
  const trim = str.slice(0, idx + findStr.length);
56
- // best effort to make a better error message than the default
57
- // mobx-state-tree
58
- // case 1. element has a path
59
64
  const match = /.*at path "(.*)" snapshot `(.*)` is not assignable/m.exec(trim);
60
65
  if (match) {
61
66
  str = `Failed to load element at ${match[1]}...Failed element had snapshot`;
62
67
  snapshotError = match[2];
63
68
  }
64
- // case 2. element has no path
65
69
  const match2 = /.*snapshot `(.*)` is not assignable/.exec(trim);
66
70
  if (match2) {
67
71
  str = 'Failed to load element...Failed element had snapshot';
@@ -73,19 +77,11 @@ function parseError(str) {
73
77
  function ErrorButtons({ error, onReset, }) {
74
78
  const { classes } = useStyles();
75
79
  const [showStack, setShowStack] = (0, react_1.useState)(false);
76
- return (react_1.default.createElement("div", { className: classes.iconFloat },
77
- typeof error === 'object' && error && 'stack' in error ? (react_1.default.createElement(material_1.Tooltip, { title: "Get stack trace" },
78
- react_1.default.createElement(material_1.IconButton, { onClick: () => {
79
- setShowStack(true);
80
- }, color: "primary" },
81
- react_1.default.createElement(Report_1.default, null)))) : null,
82
- onReset ? (react_1.default.createElement(material_1.Tooltip, { title: "Retry" },
83
- react_1.default.createElement(material_1.IconButton, { onClick: onReset, color: "primary" },
84
- react_1.default.createElement(Refresh_1.default, null)))) : null,
85
- showStack ? (react_1.default.createElement(react_1.Suspense, { fallback: null },
86
- react_1.default.createElement(ErrorMessageStackTraceDialog, { error: error, onClose: () => {
87
- setShowStack(false);
88
- } }))) : null));
80
+ return ((0, jsx_runtime_1.jsxs)("div", { className: classes.iconFloat, children: [typeof error === 'object' && error && 'stack' in error ? ((0, jsx_runtime_1.jsx)(material_1.Tooltip, { title: "Get stack trace", children: (0, jsx_runtime_1.jsx)(material_1.IconButton, { onClick: () => {
81
+ setShowStack(true);
82
+ }, color: "primary", children: (0, jsx_runtime_1.jsx)(Report_1.default, {}) }) })) : null, onReset ? ((0, jsx_runtime_1.jsx)(material_1.Tooltip, { title: "Retry", children: (0, jsx_runtime_1.jsx)(material_1.IconButton, { onClick: onReset, color: "primary", children: (0, jsx_runtime_1.jsx)(Refresh_1.default, {}) }) })) : null, showStack ? ((0, jsx_runtime_1.jsx)(react_1.Suspense, { fallback: null, children: (0, jsx_runtime_1.jsx)(ErrorMessageStackTraceDialog, { error: error, onClose: () => {
83
+ setShowStack(false);
84
+ } }) })) : null] }));
89
85
  }
90
86
  function ErrorMessage({ error, onReset, }) {
91
87
  const { classes } = useStyles();
@@ -93,9 +89,6 @@ function ErrorMessage({ error, onReset, }) {
93
89
  const str2 = str.indexOf('expected an instance of');
94
90
  const str3 = str2 !== -1 ? str.slice(0, str2) : str;
95
91
  const snapshotError = parseError(str);
96
- return (react_1.default.createElement(RedErrorMessageBox_1.default, null,
97
- str3.slice(0, 10000),
98
- react_1.default.createElement(ErrorButtons, { error: error, onReset: onReset }),
99
- snapshotError ? (react_1.default.createElement("pre", { className: classes.bg }, JSON.stringify(JSON.parse(snapshotError), null, 2))) : null));
92
+ return ((0, jsx_runtime_1.jsxs)(RedErrorMessageBox_1.default, { children: [str3.slice(0, 10000), (0, jsx_runtime_1.jsx)(ErrorButtons, { error: error, onReset: onReset }), snapshotError ? ((0, jsx_runtime_1.jsx)("pre", { className: classes.bg, children: JSON.stringify(JSON.parse(snapshotError), null, 2) })) : null] }));
100
93
  }
101
94
  exports.default = ErrorMessage;
@@ -1,6 +1,5 @@
1
- import React from 'react';
2
1
  export default function ErrorMessageStackTraceDialog({ error, onClose, extra, }: {
3
2
  onClose: () => void;
4
3
  error: unknown;
5
4
  extra?: unknown;
6
- }): React.JSX.Element;
5
+ }): import("react/jsx-runtime").JSX.Element;
@@ -1,42 +1,19 @@
1
1
  "use strict";
2
- var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
3
- if (k2 === undefined) k2 = k;
4
- var desc = Object.getOwnPropertyDescriptor(m, k);
5
- if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
6
- desc = { enumerable: true, get: function() { return m[k]; } };
7
- }
8
- Object.defineProperty(o, k2, desc);
9
- }) : (function(o, m, k, k2) {
10
- if (k2 === undefined) k2 = k;
11
- o[k2] = m[k];
12
- }));
13
- var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
14
- Object.defineProperty(o, "default", { enumerable: true, value: v });
15
- }) : function(o, v) {
16
- o["default"] = v;
17
- });
18
- var __importStar = (this && this.__importStar) || function (mod) {
19
- if (mod && mod.__esModule) return mod;
20
- var result = {};
21
- if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
22
- __setModuleDefault(result, mod);
23
- return result;
24
- };
25
2
  var __importDefault = (this && this.__importDefault) || function (mod) {
26
3
  return (mod && mod.__esModule) ? mod : { "default": mod };
27
4
  };
28
5
  Object.defineProperty(exports, "__esModule", { value: true });
29
6
  exports.default = ErrorMessageStackTraceDialog;
30
- const react_1 = __importStar(require("react"));
7
+ const jsx_runtime_1 = require("react/jsx-runtime");
8
+ const react_1 = require("react");
31
9
  const material_1 = require("@mui/material");
32
- const mui_1 = require("tss-react/mui");
33
- const source_map_js_1 = require("source-map-js");
34
10
  const copy_to_clipboard_1 = __importDefault(require("copy-to-clipboard"));
35
- // locals
11
+ const source_map_js_1 = require("source-map-js");
12
+ const mui_1 = require("tss-react/mui");
36
13
  const Dialog_1 = __importDefault(require("./Dialog"));
37
14
  const LoadingEllipses_1 = __importDefault(require("./LoadingEllipses"));
38
15
  function Link2({ href, children, }) {
39
- return (react_1.default.createElement(material_1.Link, { target: "_blank", href: href }, children));
16
+ return ((0, jsx_runtime_1.jsx)(material_1.Link, { target: "_blank", href: href, children: children }));
40
17
  }
41
18
  async function myfetch(uri) {
42
19
  const res = await fetch(uri);
@@ -53,8 +30,6 @@ async function myfetchtext(uri) {
53
30
  const res = await myfetch(uri);
54
31
  return res.text();
55
32
  }
56
- // produce a source-map resolved stack trace
57
- // reference code https://stackoverflow.com/a/77158517/2129219
58
33
  const sourceMaps = {};
59
34
  async function getSourceMapFromUri(uri) {
60
35
  var _a;
@@ -97,11 +72,8 @@ async function mapStackTrace(stack) {
97
72
  return mappedStack.join('\n');
98
73
  }
99
74
  const MAX_ERR_LEN = 10000;
100
- // Chrome has the error message in the stacktrace, firefox doesn't
101
75
  function stripMessage(trace, error) {
102
76
  if (trace.startsWith('Error:')) {
103
- // remove the error message, which can be very long due to mobx-state-tree
104
- // stuff, to get just the stack trace
105
77
  const err = `${error}`;
106
78
  return trace.slice(err.length);
107
79
  }
@@ -134,14 +106,7 @@ function Contents({ text, extra }) {
134
106
  const email = 'jbrowse2@berkeley.edu';
135
107
  const githubLink = `https://github.com/GMOD/jbrowse-components/issues/new?labels=bug&title=JBrowse+issue&body=${err}`;
136
108
  const emailLink = `mailto:${email}?subject=JBrowse%202%20error&body=${err}`;
137
- return (react_1.default.createElement(react_1.default.Fragment, null,
138
- react_1.default.createElement(material_1.Typography, null,
139
- "Post a new issue at ",
140
- react_1.default.createElement(Link2, { href: githubLink }, "GitHub"),
141
- " or send an email to ",
142
- react_1.default.createElement(Link2, { href: emailLink }, email),
143
- ' '),
144
- react_1.default.createElement("pre", { className: classes.pre }, err2)));
109
+ return ((0, jsx_runtime_1.jsxs)(jsx_runtime_1.Fragment, { children: [(0, jsx_runtime_1.jsxs)(material_1.Typography, { children: ["Post a new issue at ", (0, jsx_runtime_1.jsx)(Link2, { href: githubLink, children: "GitHub" }), " or send an email to ", (0, jsx_runtime_1.jsx)(Link2, { href: emailLink, children: email }), ' '] }), (0, jsx_runtime_1.jsx)("pre", { className: classes.pre, children: err2 })] }));
145
110
  }
146
111
  function ErrorMessageStackTraceDialog({ error, onClose, extra, }) {
147
112
  const [mappedStackTrace, setMappedStackTrace] = (0, react_1.useState)();
@@ -151,7 +116,6 @@ function ErrorMessageStackTraceDialog({ error, onClose, extra, }) {
151
116
  const errorText = error ? `${error}` : '';
152
117
  const stackTrace = stripMessage(stackTracePreProcessed, errorText);
153
118
  (0, react_1.useEffect)(() => {
154
- // eslint-disable-next-line @typescript-eslint/no-floating-promises
155
119
  ;
156
120
  (async () => {
157
121
  try {
@@ -173,20 +137,15 @@ function ErrorMessageStackTraceDialog({ error, onClose, extra, }) {
173
137
  ? `${errorText.slice(0, MAX_ERR_LEN)}...`
174
138
  : errorText,
175
139
  mappedStackTrace || 'No stack trace available',
176
- // @ts-expect-error add version info at bottom if we are in jbrowse-web
177
140
  window.JBrowseSession ? `JBrowse ${window.JBrowseSession.version}` : '',
178
141
  ]
179
142
  .filter(f => !!f)
180
143
  .join('\n');
181
- return (react_1.default.createElement(Dialog_1.default, { open: true, onClose: onClose, title: "Stack trace", maxWidth: "xl" },
182
- react_1.default.createElement(material_1.DialogContent, null, mappedStackTrace === undefined ? (react_1.default.createElement(LoadingEllipses_1.default, { variant: "h6" })) : (react_1.default.createElement(Contents, { text: errorBoxText, extra: extra }))),
183
- react_1.default.createElement(material_1.DialogActions, null,
184
- react_1.default.createElement(material_1.Button, { variant: "contained", color: "secondary", onClick: () => {
185
- (0, copy_to_clipboard_1.default)(errorBoxText);
186
- setClicked(true);
187
- setTimeout(() => {
188
- setClicked(false);
189
- }, 1000);
190
- } }, clicked ? 'Copied!' : 'Copy stack trace to clipboard'),
191
- react_1.default.createElement(material_1.Button, { variant: "contained", color: "primary", onClick: onClose }, "Close"))));
144
+ return ((0, jsx_runtime_1.jsxs)(Dialog_1.default, { open: true, onClose: onClose, title: "Stack trace", maxWidth: "xl", children: [(0, jsx_runtime_1.jsx)(material_1.DialogContent, { children: mappedStackTrace === undefined ? ((0, jsx_runtime_1.jsx)(LoadingEllipses_1.default, { variant: "h6" })) : ((0, jsx_runtime_1.jsx)(Contents, { text: errorBoxText, extra: extra })) }), (0, jsx_runtime_1.jsxs)(material_1.DialogActions, { children: [(0, jsx_runtime_1.jsx)(material_1.Button, { variant: "contained", color: "secondary", onClick: () => {
145
+ (0, copy_to_clipboard_1.default)(errorBoxText);
146
+ setClicked(true);
147
+ setTimeout(() => {
148
+ setClicked(false);
149
+ }, 1000);
150
+ }, children: clicked ? 'Copied!' : 'Copy stack trace to clipboard' }), (0, jsx_runtime_1.jsx)(material_1.Button, { variant: "contained", color: "primary", onClick: onClose, children: "Close" })] })] }));
192
151
  }
@@ -1,6 +1,5 @@
1
- import React from 'react';
2
1
  export default function FactoryResetDialog({ onClose, open, onFactoryReset, }: {
3
2
  onClose: () => void;
4
3
  open: boolean;
5
4
  onFactoryReset: () => void;
6
- }): React.JSX.Element;
5
+ }): import("react/jsx-runtime").JSX.Element;