@jbrowse/core 1.5.9 → 1.6.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/BaseFeatureWidget/BaseFeatureDetail.js +91 -78
- package/BaseFeatureWidget/SequenceFeatureDetails.js +64 -56
- package/BaseFeatureWidget/SequenceFeatureDetails.test.js +9 -9
- package/BaseFeatureWidget/index.js +1 -1
- package/BaseFeatureWidget/index.test.js +4 -4
- package/BaseFeatureWidget/util.js +13 -9
- package/CorePlugin.js +32 -20
- package/Plugin.js +13 -11
- package/PluginLoader.js +37 -32
- package/PluginManager.d.ts +8 -5
- package/PluginManager.js +142 -53
- package/ReExports/index.js +4 -4
- package/ReExports/list.js +2 -2
- package/ReExports/material-ui-colors.js +20 -20
- package/ReExports/modules.d.ts +7 -5
- package/ReExports/modules.js +51 -47
- package/TextSearch/BaseResults.js +34 -24
- package/TextSearch/BaseResults.test.js +7 -3
- package/TextSearch/TextSearchManager.js +16 -14
- package/assemblyManager/assembly.js +38 -33
- package/assemblyManager/assemblyConfigSchema.js +2 -2
- package/assemblyManager/assemblyManager.js +19 -15
- package/assemblyManager/index.js +3 -3
- package/babel.config.d.ts +15 -0
- package/babel.config.js +19 -0
- package/configuration/configurationSchema.js +19 -17
- package/configuration/configurationSlot.js +11 -11
- package/configuration/configurationSlot.test.js +5 -5
- package/configuration/index.d.ts +1 -0
- package/configuration/util.js +5 -5
- package/data_adapters/BaseAdapter.d.ts +15 -3
- package/data_adapters/BaseAdapter.js +215 -61
- package/data_adapters/BaseAdapter.test.js +29 -23
- package/data_adapters/CytobandAdapter.d.ts +1 -1
- package/data_adapters/CytobandAdapter.js +24 -18
- package/data_adapters/dataAdapterCache.js +8 -8
- package/package.json +3 -3
- package/pluggableElementTypes/AdapterType.js +30 -21
- package/pluggableElementTypes/ConnectionType.js +28 -18
- package/pluggableElementTypes/DisplayType.js +27 -17
- package/pluggableElementTypes/InternetAccountType.js +24 -14
- package/pluggableElementTypes/PluggableElementBase.js +10 -8
- package/pluggableElementTypes/RpcMethodType.d.ts +1 -1
- package/pluggableElementTypes/RpcMethodType.js +140 -117
- package/pluggableElementTypes/RpcMethodType.test.js +22 -16
- package/pluggableElementTypes/TextSearchAdapterType.js +25 -15
- package/pluggableElementTypes/TrackType.js +25 -15
- package/pluggableElementTypes/ViewType.js +25 -15
- package/pluggableElementTypes/WidgetType.js +27 -17
- package/pluggableElementTypes/index.js +11 -11
- package/pluggableElementTypes/models/BaseConnectionModelFactory.js +5 -5
- package/pluggableElementTypes/models/BaseDisplayModel.js +8 -5
- package/pluggableElementTypes/models/BaseTrackModel.js +11 -8
- package/pluggableElementTypes/models/BaseViewModel.js +3 -3
- package/pluggableElementTypes/models/InternetAccountModel.d.ts +1 -1
- package/pluggableElementTypes/models/InternetAccountModel.js +4 -4
- package/pluggableElementTypes/models/baseConnectionConfig.js +2 -2
- package/pluggableElementTypes/models/baseTrackConfig.js +7 -4
- package/pluggableElementTypes/models/index.js +4 -4
- package/pluggableElementTypes/renderers/BoxRendererType.js +48 -38
- package/pluggableElementTypes/renderers/CircularChordRendererType.js +18 -12
- package/pluggableElementTypes/renderers/ComparativeServerSideRendererType.js +34 -26
- package/pluggableElementTypes/renderers/FeatureRendererType.js +45 -35
- package/pluggableElementTypes/renderers/RendererType.js +30 -20
- package/pluggableElementTypes/renderers/ServerSideRenderedContent.js +12 -8
- package/pluggableElementTypes/renderers/ServerSideRendererType.d.ts +1 -1
- package/pluggableElementTypes/renderers/ServerSideRendererType.js +44 -32
- package/pluggableElementTypes/renderers/index.js +8 -8
- package/pluggableElementTypes/renderers/util/serializableFilterChain.js +10 -8
- package/pluggableElementTypes/renderers/util/serializableFilterChain.test.js +2 -2
- package/rpc/BaseRpcDriver.js +42 -37
- package/rpc/BaseRpcDriver.test.js +62 -48
- package/rpc/MainThreadRpcDriver.js +31 -21
- package/rpc/RpcManager.js +18 -16
- package/rpc/WebWorkerRpcDriver.js +37 -27
- package/rpc/configSchema.js +2 -2
- package/rpc/coreRpcMethods.d.ts +16 -0
- package/rpc/coreRpcMethods.js +247 -120
- package/rpc/remoteAbortSignals.js +3 -3
- package/ui/AboutDialog.js +20 -16
- package/ui/App.js +42 -38
- package/ui/AssemblySelector.d.ts +1 -1
- package/ui/AssemblySelector.js +6 -6
- package/ui/Drawer.js +7 -7
- package/ui/DrawerWidget.d.ts +1 -1
- package/ui/DrawerWidget.js +37 -33
- package/ui/DropDownMenu.js +21 -9
- package/ui/EditableTypography.js +30 -19
- package/ui/ErrorMessage.js +5 -5
- package/ui/FactoryResetDialog.js +8 -8
- package/ui/FatalErrorDialog.js +29 -12
- package/ui/FatalErrorDialog.test.js +10 -10
- package/ui/FileSelector/FileSelector.js +42 -32
- package/ui/FileSelector/LocalFileChooser.js +9 -9
- package/ui/FileSelector/UrlChooser.js +4 -4
- package/ui/FileSelector/index.js +4 -4
- package/ui/Icons.js +9 -9
- package/ui/Logo.js +19 -19
- package/ui/Menu.js +46 -35
- package/ui/NewSessionCards.js +29 -19
- package/ui/PrerenderedCanvas.js +27 -10
- package/ui/ResizeHandle.js +17 -10
- package/ui/SanitizedHTML.js +5 -5
- package/ui/SanitizedHTML.test.js +4 -4
- package/ui/Snackbar.js +16 -12
- package/ui/SnackbarModel.js +1 -1
- package/ui/Tooltip.js +11 -7
- package/ui/ViewContainer.d.ts +2 -5
- package/ui/ViewContainer.js +44 -49
- package/ui/index.d.ts +1 -0
- package/ui/index.js +26 -13
- package/ui/theme.js +15 -11
- package/util/Base1DViewModel.d.ts +14 -12
- package/util/Base1DViewModel.js +51 -55
- package/util/Base1DViewModel.test.js +5 -5
- package/util/QuickLRU.js +30 -26
- package/util/aborting.js +25 -15
- package/util/analytics.d.ts +1 -0
- package/util/analytics.js +14 -6
- package/util/blockTypes.js +48 -36
- package/util/calculateDynamicBlocks.js +4 -4
- package/util/calculateDynamicBlocks.test.js +14 -10
- package/util/calculateStaticBlocks.js +1 -1
- package/util/calculateStaticBlocks.test.js +15 -15
- package/util/compositeMap.js +30 -26
- package/util/idMaker.js +4 -4
- package/util/index.d.ts +23 -1
- package/util/index.js +135 -41
- package/util/index.test.js +11 -7
- package/util/io/RemoteFileWithRangeCache.js +40 -28
- package/util/io/index.js +5 -5
- package/util/jexl.js +5 -5
- package/util/jexlStrings.js +2 -2
- package/util/jexlStrings.test.js +2 -2
- package/util/layouts/GranularRectLayout.js +33 -27
- package/util/layouts/GranularRectLayout.test.js +10 -10
- package/util/layouts/MultiLayout.js +19 -13
- package/util/layouts/PrecomputedLayout.js +16 -14
- package/util/layouts/PrecomputedMultiLayout.js +23 -17
- package/util/layouts/SceneGraph.js +18 -12
- package/util/layouts/index.js +6 -6
- package/util/offscreenCanvasPonyfill.js +30 -28
- package/util/offscreenCanvasUtils.js +5 -5
- package/util/range.test.js +20 -20
- package/util/rxjs.js +2 -2
- package/util/simpleFeature.js +23 -18
- package/util/simpleFeature.test.js +3 -3
- package/util/stats.d.ts +1 -1
- package/util/stats.js +10 -6
- package/util/stats.test.js +15 -15
- package/util/tracks.js +1 -3
- package/util/types/index.d.ts +1 -1
- package/util/types/index.js +36 -31
- package/util/types/mst.js +19 -15
- package/util/when.js +5 -5
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