@jbrowse/core 1.5.5 → 1.5.6

package/util/compositeMap.js

@@ -1,35 +1,32 @@
 "use strict";
 
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
+var _interopRequireDefault = require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
 
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports.default = void 0;
+exports["default"] = void 0;
 
-var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
+var _index = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/regenerator/index.js"));
 
-var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/classCallCheck"));
+var _createForOfIteratorHelper2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/createForOfIteratorHelper.js"));
 
-var _createClass2 = _interopRequireDefault(require("@babel/runtime/helpers/createClass"));
+var _classCallCheck2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/classCallCheck.js"));
 
-function _createForOfIteratorHelper(o, allowArrayLike) { var it = typeof Symbol !== "undefined" && o[Symbol.iterator] || o["@@iterator"]; if (!it) { if (Array.isArray(o) || (it = _unsupportedIterableToArray(o)) || allowArrayLike && o && typeof o.length === "number") { if (it) o = it; var i = 0; var F = function F() {}; return { s: F, n: function n() { if (i >= o.length) return { done: true }; return { done: false, value: o[i++] }; }, e: function e(_e) { throw _e; }, f: F }; } throw new TypeError("Invalid attempt to iterate non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); } var normalCompletion = true, didErr = false, err; return { s: function s() { it = it.call(o); }, n: function n() { var step = it.next(); normalCompletion = step.done; return step; }, e: function e(_e2) { didErr = true; err = _e2; }, f: function f() { try { if (!normalCompletion && it.return != null) it.return(); } finally { if (didErr) throw err; } } }; }
-
-function _unsupportedIterableToArray(o, minLen) { if (!o) return; if (typeof o === "string") return _arrayLikeToArray(o, minLen); var n = Object.prototype.toString.call(o).slice(8, -1); if (n === "Object" && o.constructor) n = o.constructor.name; if (n === "Map" || n === "Set") return Array.from(o); if (n === "Arguments" || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(n)) return _arrayLikeToArray(o, minLen); }
-
-function _arrayLikeToArray(arr, len) { if (len == null || len > arr.length) len = arr.length; for (var i = 0, arr2 = new Array(len); i < len; i++) { arr2[i] = arr[i]; } return arr2; }
+var _createClass2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/createClass.js"));
 
 // takes an array or Map or Set (anything iterable with values()) of Maps
 // and lets you query them as one Map
 var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
   function CompositeMap(submaps) {
-    (0, _classCallCheck2.default)(this, CompositeMap);
+    (0, _classCallCheck2["default"])(this, CompositeMap);
+    this.submaps = submaps;
   }
 
-  (0, _createClass2.default)(CompositeMap, [{
+  (0, _createClass2["default"])(CompositeMap, [{
     key: "has",
     value: function has(id) {
-      var _iterator = _createForOfIteratorHelper(this.submaps.values()),
+      var _iterator = (0, _createForOfIteratorHelper2["default"])(this.submaps.values()),
           _step;
 
       try {
@@ -51,7 +48,7 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
   }, {
     key: "get",
     value: function get(id) {
-      var _iterator2 = _createForOfIteratorHelper(this.submaps.values()),
+      var _iterator2 = (0, _createForOfIteratorHelper2["default"])(this.submaps.values()),
           _step2;
 
       try {
@@ -72,14 +69,14 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
     }
   }, {
     key: "values",
-    value: /*#__PURE__*/_regenerator.default.mark(function values() {
+    value: /*#__PURE__*/_index["default"].mark(function values() {
       var _iterator3, _step3, key;
 
-      return _regenerator.default.wrap(function values$(_context) {
+      return _index["default"].wrap(function values$(_context) {
         while (1) {
           switch (_context.prev = _context.next) {
             case 0:
-              _iterator3 = _createForOfIteratorHelper(this.keys());
+              _iterator3 = (0, _createForOfIteratorHelper2["default"])(this.keys());
               _context.prev = 1;
 
               _iterator3.s();
@@ -124,20 +121,20 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
     })
   }, {
     key: "keys",
-    value: /*#__PURE__*/_regenerator.default.mark(function keys() {
+    value: /*#__PURE__*/_index["default"].mark(function keys() {
       var keys, _iterator4, _step4, submap, _iterator6, _step6, key, _iterator5, _step5, _key;
 
-      return _regenerator.default.wrap(function keys$(_context2) {
+      return _index["default"].wrap(function keys$(_context2) {
         while (1) {
           switch (_context2.prev = _context2.next) {
             case 0:
               keys = new Set();
-              _iterator4 = _createForOfIteratorHelper(this.submaps.values());
+              _iterator4 = (0, _createForOfIteratorHelper2["default"])(this.submaps.values());
 
               try {
                 for (_iterator4.s(); !(_step4 = _iterator4.n()).done;) {
                   submap = _step4.value;
-                  _iterator6 = _createForOfIteratorHelper(submap.keys());
+                  _iterator6 = (0, _createForOfIteratorHelper2["default"])(submap.keys());
 
                   try {
                     for (_iterator6.s(); !(_step6 = _iterator6.n()).done;) {
@@ -156,7 +153,7 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
                 _iterator4.f();
               }
 
-              _iterator5 = _createForOfIteratorHelper(keys);
+              _iterator5 = (0, _createForOfIteratorHelper2["default"])(keys);
               _context2.prev = 4;
 
               _iterator5.s();
@@ -202,14 +199,14 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
   }, {
     key: "find",
     value: function find(f) {
-      var _iterator7 = _createForOfIteratorHelper(this.submaps.values()),
+      var _iterator7 = (0, _createForOfIteratorHelper2["default"])(this.submaps.values()),
           _step7;
 
       try {
         for (_iterator7.s(); !(_step7 = _iterator7.n()).done;) {
           var submap = _step7.value;
 
-          var _iterator8 = _createForOfIteratorHelper(submap.values()),
+          var _iterator8 = (0, _createForOfIteratorHelper2["default"])(submap.values()),
               _step8;
 
           try {
@@ -237,14 +234,14 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
     }
   }, {
     key: _Symbol$iterator,
-    value: /*#__PURE__*/_regenerator.default.mark(function value() {
+    value: /*#__PURE__*/_index["default"].mark(function value() {
       var _iterator9, _step9, key;
 
-      return _regenerator.default.wrap(function value$(_context3) {
+      return _index["default"].wrap(function value$(_context3) {
         while (1) {
           switch (_context3.prev = _context3.next) {
             case 0:
-              _iterator9 = _createForOfIteratorHelper(this.keys());
+              _iterator9 = (0, _createForOfIteratorHelper2["default"])(this.keys());
               _context3.prev = 1;
 
               _iterator9.s();
@@ -289,14 +286,14 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
     })
   }, {
     key: "entries",
-    value: /*#__PURE__*/_regenerator.default.mark(function entries() {
+    value: /*#__PURE__*/_index["default"].mark(function entries() {
       var _iterator10, _step10, k;
 
-      return _regenerator.default.wrap(function entries$(_context4) {
+      return _index["default"].wrap(function entries$(_context4) {
         while (1) {
           switch (_context4.prev = _context4.next) {
             case 0:
-              _iterator10 = _createForOfIteratorHelper(this.keys());
+              _iterator10 = (0, _createForOfIteratorHelper2["default"])(this.keys());
               _context4.prev = 1;
 
               _iterator10.s();
@@ -343,4 +340,4 @@ var CompositeMap = /*#__PURE__*/function (_Symbol$iterator) {
   return CompositeMap;
 }(Symbol.iterator);
 
-exports.default = CompositeMap;
+exports["default"] = CompositeMap;

package/util/idMaker.js

@@ -1,13 +1,13 @@
 "use strict";
 
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
+var _interopRequireDefault = require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
 
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports.default = idMaker;
+exports["default"] = idMaker;
 
-var _typeof2 = _interopRequireDefault(require("@babel/runtime/helpers/typeof"));
+var _typeof2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/typeof.js"));
 
 var _ = require("./");
 
@@ -26,7 +26,7 @@ function idMaker(args) {
       break;
     }
 
-    if ((0, _typeof2.default)(args[key]) === 'object' && args[key]) {
+    if ((0, _typeof2["default"])(args[key]) === 'object' && args[key]) {
       id += idMaker(args[key], id);
     } else {
       id += "".concat(key, "-").concat(args[key], ";");

package/util/index.js

@@ -1,8 +1,8 @@
 "use strict";
 
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
+var _interopRequireWildcard = require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/interopRequireWildcard.js")["default"];
 
-var _typeof3 = require("@babel/runtime/helpers/typeof");
+var _interopRequireDefault = require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
 
 Object.defineProperty(exports, "__esModule", {
   value: true
@@ -60,7 +60,7 @@ var _exportNames = {
 Object.defineProperty(exports, "SimpleFeature", {
   enumerable: true,
   get: function get() {
-    return _simpleFeature.default;
+    return _simpleFeature["default"];
   }
 });
 exports.assembleLocString = assembleLocString;
@@ -111,17 +111,19 @@ exports.updateStatus = updateStatus;
 exports.useDebounce = useDebounce;
 exports.useDebouncedCallback = useDebouncedCallback;
 
-var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
+var _index = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/regenerator/index.js"));
 
-var _defineProperty2 = _interopRequireDefault(require("@babel/runtime/helpers/defineProperty"));
+var _objectSpread2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
 
-var _asyncToGenerator2 = _interopRequireDefault(require("@babel/runtime/helpers/asyncToGenerator"));
+var _asyncToGenerator2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/asyncToGenerator.js"));
 
-var _toConsumableArray2 = _interopRequireDefault(require("@babel/runtime/helpers/toConsumableArray"));
+var _createForOfIteratorHelper2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/createForOfIteratorHelper.js"));
 
-var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
+var _toConsumableArray2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/toConsumableArray.js"));
 
-var _typeof2 = _interopRequireDefault(require("@babel/runtime/helpers/typeof"));
+var _slicedToArray2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/slicedToArray.js"));
+
+var _typeof2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/typeof.js"));
 
 var _mobxStateTree = require("mobx-state-tree");
 
@@ -219,33 +221,20 @@ Object.keys(_offscreenCanvasUtils).forEach(function (key) {
   });
 });
 
-function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
-
-function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof3(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
-
-function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
-
-function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
-
-function _createForOfIteratorHelper(o, allowArrayLike) { var it = typeof Symbol !== "undefined" && o[Symbol.iterator] || o["@@iterator"]; if (!it) { if (Array.isArray(o) || (it = _unsupportedIterableToArray(o)) || allowArrayLike && o && typeof o.length === "number") { if (it) o = it; var i = 0; var F = function F() {}; return { s: F, n: function n() { if (i >= o.length) return { done: true }; return { done: false, value: o[i++] }; }, e: function e(_e) { throw _e; }, f: F }; } throw new TypeError("Invalid attempt to iterate non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); } var normalCompletion = true, didErr = false, err; return { s: function s() { it = it.call(o); }, n: function n() { var step = it.next(); normalCompletion = step.done; return step; }, e: function e(_e2) { didErr = true; err = _e2; }, f: function f() { try { if (!normalCompletion && it.return != null) it.return(); } finally { if (didErr) throw err; } } }; }
-
-function _unsupportedIterableToArray(o, minLen) { if (!o) return; if (typeof o === "string") return _arrayLikeToArray(o, minLen); var n = Object.prototype.toString.call(o).slice(8, -1); if (n === "Object" && o.constructor) n = o.constructor.name; if (n === "Map" || n === "Set") return Array.from(o); if (n === "Arguments" || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(n)) return _arrayLikeToArray(o, minLen); }
-
-function _arrayLikeToArray(arr, len) { if (len == null || len > arr.length) len = arr.length; for (var i = 0, arr2 = new Array(len); i < len; i++) { arr2[i] = arr[i]; } return arr2; }
-
+/* eslint-disable @typescript-eslint/no-explicit-any */
 if (!Object.fromEntries) {
   // @ts-ignore
-  _object.default.shim();
+  _object["default"].shim();
 }
 
-var inDevelopment = (typeof process === "undefined" ? "undefined" : (0, _typeof2.default)(process)) === 'object' && process.env && process.env.NODE_ENV === 'development';
+var inDevelopment = (typeof process === "undefined" ? "undefined" : (0, _typeof2["default"])(process)) === 'object' && process.env && process.env.NODE_ENV === 'development';
 exports.inDevelopment = inDevelopment;
 var inProduction = !inDevelopment;
 exports.inProduction = inProduction;
 
 function useDebounce(value, delay) {
   var _useState = (0, _react.useState)(value),
-      _useState2 = (0, _slicedToArray2.default)(_useState, 2),
+      _useState2 = (0, _slicedToArray2["default"])(_useState, 2),
       debouncedValue = _useState2[0],
       setDebouncedValue = _useState2[1];
 
@@ -289,7 +278,7 @@ function useDebouncedCallback(callback) {
 
     timeout.current = setTimeout(function () {
       if (argsRef.current) {
-        callback.apply(void 0, (0, _toConsumableArray2.default)(argsRef.current));
+        callback.apply(void 0, (0, _toConsumableArray2["default"])(argsRef.current));
       }
     }, wait);
   };
@@ -503,7 +492,7 @@ function parseLocStringOneBased(locString, isValidRefName) {
     throw new Error("invalid location string: \"".concat(locString, "\""));
   }
 
-  var _assemblyMatch = (0, _slicedToArray2.default)(assemblyMatch, 4),
+  var _assemblyMatch = (0, _slicedToArray2["default"])(assemblyMatch, 4),
       assemblyName = _assemblyMatch[2],
       location = _assemblyMatch[3];
 
@@ -537,7 +526,7 @@ function parseLocStringOneBased(locString, isValidRefName) {
       var singleMatch = suffix.match(/^(-?(\d+|\d{1,3}(,\d{3})*))(\.\.|-)?$/);
 
       if (rangeMatch) {
-        var _rangeMatch = (0, _slicedToArray2.default)(rangeMatch, 6),
+        var _rangeMatch = (0, _slicedToArray2["default"])(rangeMatch, 6),
             start = _rangeMatch[1],
             end = _rangeMatch[5];
 
@@ -550,7 +539,7 @@ function parseLocStringOneBased(locString, isValidRefName) {
           };
         }
       } else if (singleMatch) {
-        var _singleMatch = (0, _slicedToArray2.default)(singleMatch, 5),
+        var _singleMatch = (0, _slicedToArray2["default"])(singleMatch, 5),
             _start = _singleMatch[1],
             separator = _singleMatch[4];
 
@@ -763,7 +752,7 @@ function iterMap(iterable, func, sizeHint) {
   var results = sizeHint ? new Array(sizeHint) : [];
   var counter = 0;
 
-  var _iterator = _createForOfIteratorHelper(iterable),
+  var _iterator = (0, _createForOfIteratorHelper2["default"])(iterable),
       _step;
 
   try {
@@ -783,7 +772,7 @@ function iterMap(iterable, func, sizeHint) {
 
 // similar to electron.js
 function mergeConfigs(A, B) {
-  var merged = (0, _deepmerge.default)(A, B);
+  var merged = (0, _deepmerge["default"])(A, B);
 
   if (B.defaultSession) {
     merged.defaultSession = B.defaultSession;
@@ -856,9 +845,9 @@ function makeAbortableReaction(self, dataFunction, asyncReactionFunction, reacti
       return undefined;
     }
   }, /*#__PURE__*/function () {
-    var _ref = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee(data, mobxReactionHandle) {
+    var _ref = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee(data, mobxReactionHandle) {
       var thisInProgress, result;
-      return _regenerator.default.wrap(function _callee$(_context) {
+      return _index["default"].wrap(function _callee$(_context) {
         while (1) {
           switch (_context.prev = _context.next) {
             case 0:
@@ -930,16 +919,16 @@ function renameRegionIfNeeded(refNameMap, region) {
   if (region && refNameMap && refNameMap[region.refName]) {
     // clone the region so we don't modify it
     if ((0, _mobxStateTree.isStateTreeNode)(region)) {
-      region = _objectSpread({}, (0, _mobxStateTree.getSnapshot)(region));
+      region = (0, _objectSpread2["default"])({}, (0, _mobxStateTree.getSnapshot)(region));
     } else {
-      region = _objectSpread({}, region);
+      region = (0, _objectSpread2["default"])({}, region);
     } // modify it directly in the container
 
 
     var newRef = refNameMap[region.refName];
 
     if (newRef) {
-      return _objectSpread(_objectSpread({}, region), {}, {
+      return (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, region), {}, {
         refName: newRef,
         originalRefName: region.refName
       });
@@ -954,10 +943,10 @@ function renameRegionsIfNeeded(_x3, _x4) {
 }
 
 function _renameRegionsIfNeeded() {
-  _renameRegionsIfNeeded = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee3(assemblyManager, args) {
+  _renameRegionsIfNeeded = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee3(assemblyManager, args) {
     var _args$regions, regions, adapterConfig, assemblyNames, assemblyMaps;
 
-    return _regenerator.default.wrap(function _callee3$(_context3) {
+    return _index["default"].wrap(function _callee3$(_context3) {
       while (1) {
         switch (_context3.prev = _context3.next) {
           case 0:
@@ -977,8 +966,8 @@ function _renameRegionsIfNeeded() {
             _context3.t0 = Object;
             _context3.next = 7;
             return Promise.all(assemblyNames.map( /*#__PURE__*/function () {
-              var _ref3 = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2(assemblyName) {
-                return _regenerator.default.wrap(function _callee2$(_context2) {
+              var _ref3 = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee2(assemblyName) {
+                return _index["default"].wrap(function _callee2$(_context2) {
                   while (1) {
                     switch (_context2.prev = _context2.next) {
                       case 0:
@@ -1006,7 +995,7 @@ function _renameRegionsIfNeeded() {
           case 7:
             _context3.t1 = _context3.sent;
             assemblyMaps = _context3.t0.fromEntries.call(_context3.t0, _context3.t1);
-            return _context3.abrupt("return", _objectSpread(_objectSpread({}, args), {}, {
+            return _context3.abrupt("return", (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, args), {}, {
               regions: regions.map(function (region) {
                 return renameRegionIfNeeded(assemblyMaps[region.assemblyName], region);
               })
@@ -1247,9 +1236,9 @@ function updateStatus(_x5, _x6, _x7) {
 }
 
 function _updateStatus() {
-  _updateStatus = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee4(statusMsg, statusCallback, fn) {
+  _updateStatus = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee4(statusMsg, statusCallback, fn) {
     var result;
-    return _regenerator.default.wrap(function _callee4$(_context4) {
+    return _index["default"].wrap(function _callee4$(_context4) {
       while (1) {
         switch (_context4.prev = _context4.next) {
           case 0:

package/util/index.test.js

@@ -1,17 +1,13 @@
 "use strict";
 
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
+var _interopRequireDefault = require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
 
-var _defineProperty2 = _interopRequireDefault(require("@babel/runtime/helpers/defineProperty"));
+var _objectSpread2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
 
-var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
+var _slicedToArray2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/slicedToArray.js"));
 
 var _index = require("./index");
 
-function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
-
-function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
-
 describe('parseLocString', function () {
   var cases = [['chr1:1..200', {
     start: 0,
@@ -70,7 +66,7 @@ describe('parseLocString', function () {
     refName: 'chr1'
   }]];
   cases.forEach(function (_ref) {
-    var _ref2 = (0, _slicedToArray2.default)(_ref, 2),
+    var _ref2 = (0, _slicedToArray2["default"])(_ref, 2),
         input = _ref2[0],
         output = _ref2[1];
 
@@ -118,7 +114,7 @@ describe('assembleLocString', function () {
     refName: 'chr1'
   }, 'chr1:-99..-1']];
   cases.forEach(function (_ref3) {
-    var _ref4 = (0, _slicedToArray2.default)(_ref3, 2),
+    var _ref4 = (0, _slicedToArray2["default"])(_ref3, 2),
         input = _ref4[0],
         output = _ref4[1];
 
@@ -151,7 +147,7 @@ describe('assembleLocString', function () {
   test("assemble and parse 'chr1:1..100'", function () {
     expect((0, _index.parseLocString)((0, _index.assembleLocString)(location), function (refName) {
       return refName === 'chr1' || refName === 'chr2';
-    })).toEqual(_objectSpread(_objectSpread({}, location), {}, {
+    })).toEqual((0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, location), {}, {
       start: 0
     }));
   });
@@ -159,7 +155,7 @@ describe('assembleLocString', function () {
 describe('compareLocStrings', function () {
   var cases = [['chr1:1..200', 'chr1:1-200', 0], ['chr1:1-200', '{hg19}chr1:1-200', -1], ['{hg19}chr1:1-200', 'chr1:1-200', 1], ['{hg19}chr1:1-200', '{hg19}chr1:2-200', -1]];
   cases.forEach(function (_ref5) {
-    var _ref6 = (0, _slicedToArray2.default)(_ref5, 3),
+    var _ref6 = (0, _slicedToArray2["default"])(_ref5, 3),
         input1 = _ref6[0],
         input2 = _ref6[1],
         output = _ref6[2];

package/util/io/RemoteFileWithRangeCache.js

@@ -1,6 +1,6 @@
 "use strict";
 
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
+var _interopRequireDefault = require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/interopRequireDefault.js")["default"];
 
 Object.defineProperty(exports, "__esModule", {
   value: true
@@ -8,25 +8,27 @@ Object.defineProperty(exports, "__esModule", {
 exports.RemoteFileWithRangeCache = void 0;
 exports.clearCache = clearCache;
 
-var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
+var _index = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/regenerator/index.js"));
 
-var _defineProperty2 = _interopRequireDefault(require("@babel/runtime/helpers/defineProperty"));
+var _createForOfIteratorHelper2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/createForOfIteratorHelper.js"));
 
-var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
+var _objectSpread2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/objectSpread2.js"));
 
-var _asyncToGenerator2 = _interopRequireDefault(require("@babel/runtime/helpers/asyncToGenerator"));
+var _slicedToArray2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/slicedToArray.js"));
 
-var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/classCallCheck"));
+var _asyncToGenerator2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/asyncToGenerator.js"));
 
-var _createClass2 = _interopRequireDefault(require("@babel/runtime/helpers/createClass"));
+var _classCallCheck2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/classCallCheck.js"));
 
-var _get2 = _interopRequireDefault(require("@babel/runtime/helpers/get"));
+var _createClass2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/createClass.js"));
 
-var _inherits2 = _interopRequireDefault(require("@babel/runtime/helpers/inherits"));
+var _get2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/get.js"));
 
-var _possibleConstructorReturn2 = _interopRequireDefault(require("@babel/runtime/helpers/possibleConstructorReturn"));
+var _getPrototypeOf2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/getPrototypeOf.js"));
 
-var _getPrototypeOf2 = _interopRequireDefault(require("@babel/runtime/helpers/getPrototypeOf"));
+var _inherits2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/inherits.js"));
+
+var _createSuper2 = _interopRequireDefault(require("/home/ubuntu/jbrowse-components/node_modules/@babel/runtime/helpers/esm/createSuper.js"));
 
 var _httpRangeFetcher = require("http-range-fetcher");
 
@@ -34,20 +36,6 @@ var _buffer = require("buffer");
 
 var _genericFilehandle = require("generic-filehandle");
 
-function _createForOfIteratorHelper(o, allowArrayLike) { var it = typeof Symbol !== "undefined" && o[Symbol.iterator] || o["@@iterator"]; if (!it) { if (Array.isArray(o) || (it = _unsupportedIterableToArray(o)) || allowArrayLike && o && typeof o.length === "number") { if (it) o = it; var i = 0; var F = function F() {}; return { s: F, n: function n() { if (i >= o.length) return { done: true }; return { done: false, value: o[i++] }; }, e: function e(_e) { throw _e; }, f: F }; } throw new TypeError("Invalid attempt to iterate non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); } var normalCompletion = true, didErr = false, err; return { s: function s() { it = it.call(o); }, n: function n() { var step = it.next(); normalCompletion = step.done; return step; }, e: function e(_e2) { didErr = true; err = _e2; }, f: function f() { try { if (!normalCompletion && it.return != null) it.return(); } finally { if (didErr) throw err; } } }; }
-
-function _unsupportedIterableToArray(o, minLen) { if (!o) return; if (typeof o === "string") return _arrayLikeToArray(o, minLen); var n = Object.prototype.toString.call(o).slice(8, -1); if (n === "Object" && o.constructor) n = o.constructor.name; if (n === "Map" || n === "Set") return Array.from(o); if (n === "Arguments" || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(n)) return _arrayLikeToArray(o, minLen); }
-
-function _arrayLikeToArray(arr, len) { if (len == null || len > arr.length) len = arr.length; for (var i = 0, arr2 = new Array(len); i < len; i++) { arr2[i] = arr[i]; } return arr2; }
-
-function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
-
-function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
-
-function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
-
-function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
-
 var fetchers = {};
 
 function binaryRangeFetch(url, start, end) {
@@ -78,22 +66,22 @@ function clearCache() {
 }
 
 var RemoteFileWithRangeCache = /*#__PURE__*/function (_RemoteFile) {
-  (0, _inherits2.default)(RemoteFileWithRangeCache, _RemoteFile);
+  (0, _inherits2["default"])(RemoteFileWithRangeCache, _RemoteFile);
 
-  var _super = _createSuper(RemoteFileWithRangeCache);
+  var _super = (0, _createSuper2["default"])(RemoteFileWithRangeCache);
 
   function RemoteFileWithRangeCache() {
-    (0, _classCallCheck2.default)(this, RemoteFileWithRangeCache);
+    (0, _classCallCheck2["default"])(this, RemoteFileWithRangeCache);
     return _super.apply(this, arguments);
   }
 
-  (0, _createClass2.default)(RemoteFileWithRangeCache, [{
+  (0, _createClass2["default"])(RemoteFileWithRangeCache, [{
     key: "fetch",
     value: function () {
-      var _fetch = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee(url, init) {
+      var _fetch = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee(url, init) {
         var requestHeaders, range, _ref, _ref2, rangeParse, _rangeParse, _start, _end, s, e, response, headers;
 
-        return _regenerator.default.wrap(function _callee$(_context) {
+        return _index["default"].wrap(function _callee$(_context) {
           while (1) {
             switch (_context.prev = _context.next) {
               case 0:
@@ -110,12 +98,12 @@ var RemoteFileWithRangeCache = /*#__PURE__*/function (_RemoteFile) {
                   } else if (Array.isArray(requestHeaders)) {
                     ;
                     _ref = requestHeaders.find(function (_ref3) {
-                      var _ref4 = (0, _slicedToArray2.default)(_ref3, 1),
+                      var _ref4 = (0, _slicedToArray2["default"])(_ref3, 1),
                           key = _ref4[0];
 
                       return key === 'range';
                     }) || [undefined, undefined];
-                    _ref2 = (0, _slicedToArray2.default)(_ref, 2);
+                    _ref2 = (0, _slicedToArray2["default"])(_ref, 2);
                     range = _ref2[1];
                   } else {
                     range = requestHeaders.range;
@@ -134,7 +122,7 @@ var RemoteFileWithRangeCache = /*#__PURE__*/function (_RemoteFile) {
                   break;
                 }
 
-                _rangeParse = (0, _slicedToArray2.default)(rangeParse, 3), _start = _rangeParse[1], _end = _rangeParse[2];
+                _rangeParse = (0, _slicedToArray2["default"])(rangeParse, 3), _start = _rangeParse[1], _end = _rangeParse[2];
                 s = parseInt(_start, 10);
                 e = parseInt(_end, 10);
                 _context.next = 11;
@@ -151,7 +139,7 @@ var RemoteFileWithRangeCache = /*#__PURE__*/function (_RemoteFile) {
                 }));
 
               case 14:
-                return _context.abrupt("return", (0, _get2.default)((0, _getPrototypeOf2.default)(RemoteFileWithRangeCache.prototype), "fetch", this).call(this, url, init));
+                return _context.abrupt("return", (0, _get2["default"])((0, _getPrototypeOf2["default"])(RemoteFileWithRangeCache.prototype), "fetch", this).call(this, url, init));
 
               case 15:
               case "end":
@@ -170,7 +158,7 @@ var RemoteFileWithRangeCache = /*#__PURE__*/function (_RemoteFile) {
   }, {
     key: "fetchBinaryRange",
     value: function () {
-      var _fetchBinaryRange = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2(url, start, end) {
+      var _fetchBinaryRange = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee2(url, start, end) {
         var options,
             requestDate,
             requestHeaders,
@@ -187,17 +175,17 @@ var RemoteFileWithRangeCache = /*#__PURE__*/function (_RemoteFile) {
             arrayBuffer,
             _args2 = arguments;
 
-        return _regenerator.default.wrap(function _callee2$(_context2) {
+        return _index["default"].wrap(function _callee2$(_context2) {
           while (1) {
             switch (_context2.prev = _context2.next) {
               case 0:
                 options = _args2.length > 3 && _args2[3] !== undefined ? _args2[3] : {};
                 requestDate = new Date();
-                requestHeaders = _objectSpread(_objectSpread({}, options.headers), {}, {
+                requestHeaders = (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, options.headers), {}, {
                   range: "bytes=".concat(start, "-").concat(end)
                 });
                 _context2.next = 5;
-                return (0, _get2.default)((0, _getPrototypeOf2.default)(RemoteFileWithRangeCache.prototype), "fetch", this).call(this, url, _objectSpread(_objectSpread({}, options), {}, {
+                return (0, _get2["default"])((0, _getPrototypeOf2["default"])(RemoteFileWithRangeCache.prototype), "fetch", this).call(this, url, (0, _objectSpread2["default"])((0, _objectSpread2["default"])({}, options), {}, {
                   headers: requestHeaders
                 }));
 
@@ -219,11 +207,11 @@ var RemoteFileWithRangeCache = /*#__PURE__*/function (_RemoteFile) {
                 // will miss duplicate headers of course
                 // eslint-disable-next-line @typescript-eslint/no-explicit-any
                 headers = {};
-                _iterator = _createForOfIteratorHelper(res.headers.entries());
+                _iterator = (0, _createForOfIteratorHelper2["default"])(res.headers.entries());
 
                 try {
                   for (_iterator.s(); !(_step = _iterator.n()).done;) {
-                    _step$value = (0, _slicedToArray2.default)(_step.value, 2), k = _step$value[0], v = _step$value[1];
+                    _step$value = (0, _slicedToArray2["default"])(_step.value, 2), k = _step$value[0], v = _step$value[1];
                     headers[k] = v;
                   } // return the response headers, and the data buffer