@jbrowse/core 1.5.5 → 1.5.6
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/BaseFeatureWidget/BaseFeatureDetail.js +78 -91
- package/BaseFeatureWidget/SequenceFeatureDetails.js +57 -65
- package/BaseFeatureWidget/SequenceFeatureDetails.test.js +9 -9
- package/BaseFeatureWidget/index.js +1 -1
- package/BaseFeatureWidget/index.test.js +3 -3
- package/BaseFeatureWidget/types.js +5 -1
- package/BaseFeatureWidget/util.js +9 -13
- package/CorePlugin.js +19 -31
- package/Plugin.js +11 -13
- package/PluginLoader.js +33 -38
- package/PluginManager.js +55 -56
- package/ReExports/index.js +4 -4
- package/ReExports/list.js +2 -2
- package/ReExports/material-ui-colors.js +20 -20
- package/ReExports/modules.js +47 -51
- package/TextSearch/BaseResults.js +24 -34
- package/TextSearch/BaseResults.test.js +3 -7
- package/TextSearch/TextSearchManager.js +16 -17
- package/assemblyManager/assembly.js +34 -39
- package/assemblyManager/assemblyConfigSchema.js +2 -2
- package/assemblyManager/assemblyManager.js +16 -20
- package/assemblyManager/index.js +3 -3
- package/configuration/configurationSchema.js +17 -19
- package/configuration/configurationSlot.js +11 -11
- package/configuration/configurationSlot.test.js +5 -5
- package/configuration/util.js +5 -5
- package/data_adapters/BaseAdapter.js +38 -40
- package/data_adapters/BaseAdapter.test.js +24 -30
- package/data_adapters/CytobandAdapter.js +16 -22
- package/data_adapters/dataAdapterCache.js +9 -9
- package/package.json +3 -3
- package/pluggableElementTypes/AdapterType.js +22 -31
- package/pluggableElementTypes/ConnectionType.js +18 -28
- package/pluggableElementTypes/DisplayType.js +17 -27
- package/pluggableElementTypes/InternetAccountType.js +14 -24
- package/pluggableElementTypes/PluggableElementBase.js +8 -10
- package/pluggableElementTypes/RpcMethodType.js +41 -55
- package/pluggableElementTypes/RpcMethodType.test.js +17 -23
- package/pluggableElementTypes/TextSearchAdapterType.js +15 -25
- package/pluggableElementTypes/TrackType.js +15 -25
- package/pluggableElementTypes/ViewType.js +15 -25
- package/pluggableElementTypes/WidgetType.js +17 -27
- package/pluggableElementTypes/index.js +11 -11
- package/pluggableElementTypes/models/BaseConnectionModelFactory.js +5 -5
- package/pluggableElementTypes/models/BaseDisplayModel.js +5 -8
- package/pluggableElementTypes/models/BaseTrackModel.js +8 -11
- package/pluggableElementTypes/models/BaseViewModel.js +3 -3
- package/pluggableElementTypes/models/InternetAccountModel.js +5 -5
- package/pluggableElementTypes/models/baseConnectionConfig.js +2 -2
- package/pluggableElementTypes/models/baseTrackConfig.js +4 -7
- package/pluggableElementTypes/models/index.js +4 -4
- package/pluggableElementTypes/renderers/BoxRendererType.js +39 -49
- package/pluggableElementTypes/renderers/CircularChordRendererType.js +12 -18
- package/pluggableElementTypes/renderers/ComparativeServerSideRendererType.js +27 -35
- package/pluggableElementTypes/renderers/FeatureRendererType.js +36 -46
- package/pluggableElementTypes/renderers/RendererType.js +21 -31
- package/pluggableElementTypes/renderers/ServerSideRenderedContent.js +8 -12
- package/pluggableElementTypes/renderers/ServerSideRendererType.js +31 -44
- package/pluggableElementTypes/renderers/index.js +8 -8
- package/pluggableElementTypes/renderers/util/serializableFilterChain.js +8 -10
- package/pluggableElementTypes/renderers/util/serializableFilterChain.test.js +2 -2
- package/rpc/BaseRpcDriver.js +38 -41
- package/rpc/BaseRpcDriver.test.js +49 -63
- package/rpc/MainThreadRpcDriver.js +22 -32
- package/rpc/RpcManager.js +20 -19
- package/rpc/WebWorkerRpcDriver.js +29 -38
- package/rpc/configSchema.js +2 -2
- package/rpc/coreRpcMethods.js +72 -82
- package/rpc/remoteAbortSignals.js +3 -3
- package/ui/AboutDialog.js +17 -21
- package/ui/App.js +38 -42
- package/ui/AssemblySelector.js +5 -5
- package/ui/Drawer.js +7 -7
- package/ui/DrawerWidget.js +33 -37
- package/ui/DropDownMenu.js +9 -21
- package/ui/EditableTypography.js +19 -30
- package/ui/ErrorMessage.js +5 -5
- package/ui/FactoryResetDialog.js +8 -8
- package/ui/FatalErrorDialog.js +12 -29
- package/ui/FatalErrorDialog.test.js +11 -11
- package/ui/FileSelector/FileSelector.js +32 -42
- package/ui/FileSelector/LocalFileChooser.js +9 -9
- package/ui/FileSelector/UrlChooser.js +4 -4
- package/ui/FileSelector/index.js +4 -4
- package/ui/Icons.js +9 -9
- package/ui/Logo.js +19 -19
- package/ui/Menu.js +35 -46
- package/ui/NewSessionCards.js +19 -29
- package/ui/PrerenderedCanvas.js +10 -27
- package/ui/ResizeHandle.js +10 -17
- package/ui/SanitizedHTML.js +5 -5
- package/ui/SanitizedHTML.test.js +4 -4
- package/ui/Snackbar.js +12 -16
- package/ui/SnackbarModel.js +1 -1
- package/ui/Tooltip.js +7 -11
- package/ui/ViewContainer.js +20 -30
- package/ui/index.js +13 -17
- package/ui/theme.js +11 -15
- package/util/Base1DViewModel.js +10 -14
- package/util/Base1DViewModel.test.js +5 -5
- package/util/QuickLRU.js +27 -31
- package/util/aborting.js +16 -26
- package/util/analytics.js +7 -7
- package/util/blockTypes.js +39 -49
- package/util/calculateDynamicBlocks.js +4 -4
- package/util/calculateDynamicBlocks.test.js +10 -14
- package/util/calculateStaticBlocks.js +1 -1
- package/util/calculateStaticBlocks.test.js +15 -15
- package/util/compositeMap.js +28 -31
- package/util/idMaker.js +4 -4
- package/util/index.js +33 -44
- package/util/index.test.js +7 -11
- package/util/io/RemoteFileWithRangeCache.js +29 -41
- package/util/io/index.js +6 -6
- package/util/jexl.js +8 -5
- package/util/jexlStrings.js +2 -2
- package/util/jexlStrings.test.js +2 -2
- package/util/layouts/BaseLayout.js +5 -1
- package/util/layouts/GranularRectLayout.js +27 -33
- package/util/layouts/GranularRectLayout.test.js +10 -10
- package/util/layouts/MultiLayout.js +14 -19
- package/util/layouts/PrecomputedLayout.js +14 -16
- package/util/layouts/PrecomputedMultiLayout.js +17 -23
- package/util/layouts/SceneGraph.js +18 -18
- package/util/layouts/index.js +6 -6
- package/util/offscreenCanvasPonyfill.js +29 -31
- package/util/offscreenCanvasUtils.js +6 -6
- package/util/range.test.js +20 -20
- package/util/rxjs.js +2 -2
- package/util/simpleFeature.js +19 -24
- package/util/simpleFeature.test.js +3 -3
- package/util/stats.js +7 -11
- package/util/stats.test.js +15 -15
- package/util/types/index.js +32 -34
- package/util/types/mst.js +15 -19
- package/util/types/util.js +5 -1
- package/util/when.js +6 -6
- package/babel.config.d.ts +0 -15
- package/babel.config.js +0 -19
package/rpc/BaseRpcDriver.js
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function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
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_watchWorker = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee3(worker, pingTime, rpcDriverClassName) {
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exports["default"] = BaseRpcDriver;
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function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
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function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
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function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
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function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
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var MockWorkerHandle = /*#__PURE__*/function () {
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var MockRpcDriver = /*#__PURE__*/function (_BaseRpcDriver) {
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var MockRendererShort = /*#__PURE__*/function (_RpcMethodType2) {
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var _super3 = (0, _createSuper2["default"])(MockRendererShort);
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var _execute2 = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee6() {
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test('test RPC driver operation timeout and worker replace', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_index["default"].mark(function _callee7() {
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pluginManager = new _PluginManager["default"]();
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function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
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function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
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exports["default"] = MainThreadRpcDriver;
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