@jbrowse/core 1.5.0 → 1.5.4

package/util/layouts/GranularRectLayout.d.ts

@@ -1,38 +1,47 @@
-import { RectTuple, SerializedLayout, BaseLayout } from './BaseLayout';
+import { RectTuple, SerializedLayout, Rectangle, BaseLayout } from './BaseLayout';
 export default class GranularRectLayout<T> implements BaseLayout<T> {
+    private pitchX;
+    private pitchY;
+    private hardRowLimit;
+    private bitmap;
     private rectangles;
     maxHeightReached: boolean;
     private maxHeight;
-    private rbush;
-    private spacing;
+    private displayMode;
     private pTotalHeight;
-    private pitchX;
-    constructor({ maxHeight, spacing, pitchX, }?: {
-        maxHeight?: number;
-        spacing?: number;
+    constructor({ pitchX, pitchY, maxHeight, hardRowLimit, displayMode, }?: {
         pitchX?: number;
+        pitchY?: number;
+        maxHeight?: number;
+        displayMode?: string;
+        hardRowLimit?: number;
     });
     /**
      * @returns top position for the rect, or Null if laying
      *  out the rect would exceed maxHeight
      */
     addRect(id: string, left: number, right: number, height: number, data?: Record<string, T>): number | null;
-    collides(): boolean;
+    collides(rect: Rectangle<T>, top: number): boolean;
+    /**
+     * make a subarray if it does not exist
+     */
+    private autovivifyRow;
+    addRectToBitmap(rect: Rectangle<T>): void;
     /**
      *  Given a range of X coordinates, deletes all data dealing with
      *  the features.
      */
-    discardRange(): void;
+    discardRange(left: number, right: number): void;
     hasSeen(id: string): boolean;
     getByCoord(x: number, y: number): Record<string, T> | string | undefined;
     getByID(id: string): RectTuple | undefined;
     cleanup(): void;
     getTotalHeight(): number;
     get totalHeight(): number;
+    getRectangles(): Map<string, RectTuple>;
     serializeRegion(region: {
         start: number;
         end: number;
     }): SerializedLayout;
-    getRectangles(): Map<string, RectTuple>;
     toJSON(): SerializedLayout;
 }