@jbrowse/bandage-core 9.1.0 → 9.3.0

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Files changed (53) hide show
  1. package/dist/bubbles/bubbleHalos.js +3 -1
  2. package/dist/bubbles/superbubbles.js +3 -5
  3. package/dist/chunks/{chunk-GJMC3PGM.js → chunk-3FOOZ5VL.js} +15 -14
  4. package/dist/chunks/{chunk-FFFQNQUI.js → chunk-A4MYLGKG.js} +1 -1
  5. package/dist/chunks/{chunk-2AWUWGAD.js → chunk-ABOZYAN5.js} +4 -0
  6. package/dist/chunks/chunk-B4645SM2.js +358 -0
  7. package/dist/chunks/chunk-B4YH42OP.js +24 -0
  8. package/dist/chunks/{chunk-XLCTQHBE.js → chunk-BLRJ6IGK.js} +1 -1
  9. package/dist/chunks/{chunk-UID3QBWH.js → chunk-BTMPPLDF.js} +1 -1
  10. package/dist/chunks/{chunk-RRZMMYBG.js → chunk-BV64PQ2C.js} +1 -1
  11. package/dist/chunks/{chunk-W253V6RR.js → chunk-CVYDR2OP.js} +1 -1
  12. package/dist/chunks/{chunk-MIW3HYPE.js → chunk-GFRPX6M2.js} +2 -2
  13. package/dist/chunks/{chunk-MBB7ATM6.js → chunk-LFKMASER.js} +1 -1
  14. package/dist/chunks/{chunk-6ZNQJ5ZD.js → chunk-OXTR3BVF.js} +1 -1
  15. package/dist/chunks/{chunk-FUVI4WQP.js → chunk-ROYHPOYF.js} +7 -7
  16. package/dist/chunks/{chunk-3TGUKQWQ.js → chunk-TL3TYSCP.js} +22 -22
  17. package/dist/chunks/{chunk-WDTXW7T2.js → chunk-UD5FOCI2.js} +1 -1
  18. package/dist/chunks/{chunk-MXDQGA7A.js → chunk-XKM5OHQQ.js} +1 -1
  19. package/dist/chunks/{chunk-DPV2CUIE.js → chunk-XPT66H6H.js} +1 -1
  20. package/dist/cli/figure.js +27 -27
  21. package/dist/cli/fold.js +72 -0
  22. package/dist/figure.js +17 -17
  23. package/dist/figureSettings.js +4 -4
  24. package/dist/foldVariants.js +9 -0
  25. package/dist/gfa/writeRgfa.js +6 -0
  26. package/dist/index.js +63 -63
  27. package/dist/labelLayout.js +1 -1
  28. package/dist/layout/forceCache.js +4 -4
  29. package/dist/layout/trimToWindow.js +13 -0
  30. package/dist/layout/walkRowDraw.js +4 -4
  31. package/dist/layout/walkStrip.js +5 -5
  32. package/dist/layoutModes.js +2 -2
  33. package/dist/pipeline.js +3 -3
  34. package/dist/referenceRampCss.js +3 -3
  35. package/dist/referenceStrip.js +3 -3
  36. package/dist/renderer/GeometryBuilder.js +2 -2
  37. package/dist/tubeMap/nodeColors.js +3 -3
  38. package/dist/types/bubbles/bubbleHalos.d.ts +2 -0
  39. package/dist/types/bubbles/superbubbles.d.ts +0 -1
  40. package/dist/types/cli/fold.d.ts +1 -0
  41. package/dist/types/foldVariants.d.ts +2 -0
  42. package/dist/types/gfa/writeRgfa.d.ts +2 -0
  43. package/dist/types/labelLayout.d.ts +6 -0
  44. package/dist/types/layout/trimToWindow.d.ts +4 -0
  45. package/dist/types/version.d.ts +1 -1
  46. package/dist/version.js +1 -1
  47. package/dist/viewport.js +4 -4
  48. package/dist/walkEncoding.js +3 -3
  49. package/dist/walkHighlight.js +4 -4
  50. package/package.json +3 -2
  51. package/dist/chunks/{chunk-HBEKUQO4.js → chunk-BR25DGIJ.js} +4 -4
  52. package/dist/chunks/{chunk-WNUZP3WQ.js → chunk-M7SRZJ32.js} +3 -3
  53. package/dist/chunks/{chunk-OOXIMURX.js → chunk-ZGRYFUXE.js} +8 -8
package/dist/chunks/{chunk-OOXIMURX.js → chunk-ZGRYFUXE.js} RENAMED
@@ -4,15 +4,20 @@ import {
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  import {
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  seededNodes
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  } from "./chunk-IGVV37VI.js";
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- import {
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- graphFromTables
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- } from "./chunk-OA7RIMZ2.js";
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  import {
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  convertGFAToGraph
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  } from "./chunk-OCMBULGN.js";
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+ import {
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+ graphFromTables
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+ } from "./chunk-OA7RIMZ2.js";
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  import {
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  parseGFA
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  } from "./chunk-CDLPYR5O.js";
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+ import {
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+ routeNodes,
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+ takeRoutes,
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+ withDeletionRoutes
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+ } from "./chunk-JVLURPFW.js";
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  import {
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  anchorGraph
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  } from "./chunk-ST2IBUAN.js";
@@ -20,11 +25,6 @@ import {
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  mergeRuns,
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  splitRuns
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  } from "./chunk-TAMCZHLW.js";
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- import {
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- routeNodes,
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- takeRoutes,
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- withDeletionRoutes
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- } from "./chunk-JVLURPFW.js";
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  import {
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  spreadFor
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  } from "./chunk-UVBGRJQX.js";