@jbrowse/bandage-core 10.3.0 → 11.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (82) hide show
  1. package/README.md +5 -0
  2. package/dist/bubbles/popBubble.js +2 -2
  3. package/dist/bubbles/superbubbles.js +3 -3
  4. package/dist/chunks/{chunk-EHXBZ5JZ.js → chunk-2Q22S52W.js} +1 -1
  5. package/dist/chunks/{chunk-IYALCKNB.js → chunk-3GP3KT5L.js} +1 -1
  6. package/dist/chunks/{chunk-A54O52XZ.js → chunk-3UST3ZQE.js} +1 -1
  7. package/dist/chunks/{chunk-DBLV7PGG.js → chunk-3XSRT7RQ.js} +16 -2
  8. package/dist/chunks/{chunk-7JGLJK44.js → chunk-5LTZVKZQ.js} +10 -10
  9. package/dist/chunks/{chunk-PTQPTDZH.js → chunk-6OP4HPXG.js} +1 -1
  10. package/dist/chunks/{chunk-WONB6LMC.js → chunk-AI5PTOSV.js} +1 -1
  11. package/dist/chunks/{chunk-LGJBB5BP.js → chunk-B5X2RLJG.js} +9 -1
  12. package/dist/chunks/{chunk-TCOLHD7N.js → chunk-BIOKXS3M.js} +2 -2
  13. package/dist/chunks/{chunk-BVYR7IFN.js → chunk-C3NT37C3.js} +24 -3
  14. package/dist/chunks/{chunk-5YILQTHE.js → chunk-CIDSF47D.js} +29 -9
  15. package/dist/chunks/{chunk-AMX4OQAW.js → chunk-CTZRIDMY.js} +7 -7
  16. package/dist/chunks/{chunk-XUT4HXVE.js → chunk-CZT33FZG.js} +8 -8
  17. package/dist/chunks/{chunk-CGFPFBT2.js → chunk-D4ZFRBB4.js} +11 -2
  18. package/dist/chunks/{chunk-V7J6U4XC.js → chunk-DO62DG26.js} +1 -1
  19. package/dist/chunks/{chunk-Z6XZWPXK.js → chunk-DZR37KXT.js} +51 -2
  20. package/dist/chunks/{chunk-MD5VPXXT.js → chunk-EDWU7OM4.js} +5 -5
  21. package/dist/chunks/chunk-EIY2SKD3.js +164 -0
  22. package/dist/chunks/{chunk-A55OZVYX.js → chunk-EY2ZGSCP.js} +2 -2
  23. package/dist/chunks/{chunk-RWKP7UO4.js → chunk-FFHJGWDK.js} +6 -2
  24. package/dist/chunks/{chunk-KWHWNOTY.js → chunk-KDU4EF66.js} +4 -4
  25. package/dist/chunks/{chunk-65ILXEIN.js → chunk-L5IETLWP.js} +5 -5
  26. package/dist/chunks/{chunk-GIHTHYXY.js → chunk-NMWQUFPF.js} +1 -1
  27. package/dist/chunks/{chunk-QQCOVMMT.js → chunk-OLKXMZ6J.js} +1 -1
  28. package/dist/chunks/{chunk-ZNJ4JAPT.js → chunk-PK5QQOMN.js} +3 -3
  29. package/dist/chunks/{chunk-PPDE4IVT.js → chunk-PNMJFFNB.js} +1 -1
  30. package/dist/chunks/{chunk-WJ4TIAVA.js → chunk-RNYPCQZ3.js} +1 -1
  31. package/dist/chunks/{chunk-2XEQR54X.js → chunk-SWCULW6S.js} +1 -1
  32. package/dist/chunks/{chunk-SHKGYGM4.js → chunk-TEF3NBG3.js} +3 -3
  33. package/dist/chunks/{chunk-M5NPD55W.js → chunk-TUQKGAK3.js} +1 -1
  34. package/dist/chunks/{chunk-ZPBEUOBM.js → chunk-W6EXQDV5.js} +1 -1
  35. package/dist/chunks/{chunk-7XR26JST.js → chunk-XVS52NMZ.js} +1 -1
  36. package/dist/chunks/{chunk-SZHQK6GL.js → chunk-XZ6PQBU6.js} +59 -13
  37. package/dist/cli/figure.js +26 -25
  38. package/dist/cli/fold.js +6 -5
  39. package/dist/figure.js +20 -19
  40. package/dist/figureData.js +23 -22
  41. package/dist/figureScene.js +15 -14
  42. package/dist/figureSettings.js +7 -6
  43. package/dist/gbzCut.js +4 -3
  44. package/dist/gbzWindow.js +3 -2
  45. package/dist/gfa/gfaConverter.js +3 -2
  46. package/dist/gfa/gfaTables.js +2 -1
  47. package/dist/gfa/graphTables.js +2 -1
  48. package/dist/gfa/walkStops.js +28 -0
  49. package/dist/index.js +60 -42
  50. package/dist/layout/forceCache.js +7 -6
  51. package/dist/layout/trimToWindow.js +1 -1
  52. package/dist/layout/tubeMapLayout.js +5 -4
  53. package/dist/layout/walkRowDraw.js +13 -4
  54. package/dist/layout/walkRowLayout.js +4 -3
  55. package/dist/layout/walkRows.js +3 -2
  56. package/dist/layout/walkStrip.js +8 -7
  57. package/dist/layoutModes.js +8 -7
  58. package/dist/pathAnchoring.js +1 -1
  59. package/dist/pathColors.js +2 -2
  60. package/dist/pipeline.js +6 -5
  61. package/dist/referenceStrip.js +4 -4
  62. package/dist/renderer/GeometryBuilder.js +3 -3
  63. package/dist/tubeMap/bundle.js +6 -5
  64. package/dist/tubeMap/coarsen.js +6 -5
  65. package/dist/tubeMap/deviations.js +6 -5
  66. package/dist/tubeMap/draw.js +5 -4
  67. package/dist/tubeMap/nodeColors.js +4 -4
  68. package/dist/types/gfa/graphTables.d.ts +3 -0
  69. package/dist/types/gfa/walkStops.d.ts +59 -0
  70. package/dist/types/index.d.ts +4 -2
  71. package/dist/types/layout/walkRowDraw.d.ts +14 -1
  72. package/dist/types/layout/walkRows.d.ts +4 -1
  73. package/dist/types/types.d.ts +19 -0
  74. package/dist/types/version.d.ts +1 -1
  75. package/dist/types/walkHighlight.d.ts +2 -0
  76. package/dist/types/walkKey.d.ts +1 -1
  77. package/dist/version.js +1 -1
  78. package/dist/viewport.js +7 -6
  79. package/dist/walkEncoding.js +4 -4
  80. package/dist/walkHighlight.js +6 -5
  81. package/dist/walkKey.js +2 -1
  82. package/package.json +1 -1
package/dist/walkHighlight.js CHANGED
@@ -2,16 +2,17 @@ import {
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  facetLifts,
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  walkHighlight,
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  walkLift
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- } from "./chunks/chunk-BVYR7IFN.js";
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- import "./chunks/chunk-V7J6U4XC.js";
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- import "./chunks/chunk-2XEQR54X.js";
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+ } from "./chunks/chunk-C3NT37C3.js";
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+ import "./chunks/chunk-DO62DG26.js";
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+ import "./chunks/chunk-SWCULW6S.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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  import "./chunks/chunk-GQZVR5DW.js";
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  import "./chunks/chunk-WA5WNP6V.js";
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- import "./chunks/chunk-IYALCKNB.js";
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+ import "./chunks/chunk-3GP3KT5L.js";
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  import "./chunks/chunk-CRCD3ODN.js";
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- import "./chunks/chunk-LGJBB5BP.js";
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+ import "./chunks/chunk-B5X2RLJG.js";
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  import "./chunks/chunk-VX656OAZ.js";
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+ import "./chunks/chunk-EIY2SKD3.js";
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  import "./chunks/chunk-ZPZ7GNBT.js";
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  import "./chunks/chunk-PFRQBCGC.js";
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  import "./chunks/chunk-HMXCN6PG.js";
package/dist/walkKey.js CHANGED
@@ -2,7 +2,8 @@ import {
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  rangeText,
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  walkKey,
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  walkPosition
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- } from "./chunks/chunk-CGFPFBT2.js";
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+ } from "./chunks/chunk-D4ZFRBB4.js";
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+ import "./chunks/chunk-EIY2SKD3.js";
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  import "./chunks/chunk-PFRQBCGC.js";
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  import "./chunks/chunk-HMXCN6PG.js";
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  import "./chunks/chunk-AB35TJST.js";
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@jbrowse/bandage-core",
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- "version": "10.3.0",
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+ "version": "11.0.0",
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  "description": "Pangenome graph layout and drawing with no host: GFA in, the Bandage force-directed engine and reference-anchored layouts, a Canvas2D renderer, hit testing and labels out",
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  "license": "GPL-3.0-or-later",
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  "repository": {