@isaacriehm/cairn-core 0.19.1 → 0.22.0

package/dist/gc/entity-orphan.js

@@ -32,23 +32,60 @@
  */
 import { existsSync, readdirSync, readFileSync } from "node:fs";
 import { join } from "node:path";
-import { decisionsDir, invariantsDir, parseFrontmatterRecord, } from "@isaacriehm/cairn-state";
+import { decisionsDir, invariantsDir, isGhost, knownExtensions, parseFrontmatterRecord, readScopeIndex, } from "@isaacriehm/cairn-state";
+import { makeGhostBlockResolver } from "./ghost-anchor.js";
 import { walkSourceTree } from "./walk-source.js";
 const PASS_ID = "entity-orphan";
 const GRACE_DAYS = 7;
 const GRACE_MS = GRACE_DAYS * 86_400_000;
 const INV_RE = /§INV-([0-9a-f]{7,})\b/g;
 const DEC_RE = /§DEC-([0-9a-f]{7,})\b/g;
+// Code extensions from the shared language registry (single source); markup
+// /style extras have no language profile but still carry §INV/§DEC citations.
 const SOURCE_EXTENSIONS = new Set([
-    ".ts", ".tsx", ".js", ".jsx", ".mjs", ".cjs",
-    ".py", ".rb", ".go", ".rs", ".java", ".c", ".cc", ".cpp", ".h", ".hpp",
-    ".swift", ".kt", ".sh", ".bash", ".zsh",
-    ".sql", ".html", ".vue", ".svelte", ".css", ".scss",
+    ...knownExtensions(),
+    ".html",
+    ".css",
+    ".scss",
 ]);
 function fileExt(path) {
     const idx = path.lastIndexOf(".");
     return idx === -1 ? "" : path.slice(idx).toLowerCase();
 }
+/**
+ * Ghost liveness floor (fallback) — there are no in-source `§` cites to grep,
+ * so the binding lives in the out-of-repo scope-index (the SoT in ghost). An
+ * entity is live when SOME still-existing file binds it. Used only for legacy
+ * entities that predate the `sot_content_hash` anchor; current entities use
+ * the sharper block-resolution check (`entityGhostLive`).
+ */
+function entityBoundLive(repoRoot, id, idx) {
+    if (idx === null)
+        return false;
+    for (const [file, entry] of Object.entries(idx.files)) {
+        if (entry.decisions.includes(id) || entry.invariants.includes(id)) {
+            if (existsSync(join(repoRoot, file)))
+                return true;
+        }
+    }
+    return false;
+}
+/**
+ * Ghost liveness (§3.5.1/§3.6) — the governing comment block still resolves by
+ * content hash in its source file. Location-independent: survives the block
+ * moving within the file, but a deleted or rewritten comment correctly reads as
+ * dead even when the file itself remains (the bug `entityBoundLive` alone can't
+ * catch). Falls back to the coarse bound-file floor for legacy entities with no
+ * 64-char `sot_content_hash`.
+ */
+function entityGhostLive(repoRoot, id, fm, idx, resolveBlock) {
+    const sourceFile = typeof fm["source_file"] === "string" ? fm["source_file"] : "";
+    const hash = typeof fm["sot_content_hash"] === "string" ? fm["sot_content_hash"] : "";
+    if (hash.length === 64 && sourceFile.length > 0) {
+        return resolveBlock(sourceFile, hash).found;
+    }
+    return entityBoundLive(repoRoot, id, idx);
+}
 /** Set of every DEC/INV id cited by a `§` reference anywhere in the source tree. */
 function collectCitedIds(repoRoot) {
     const cited = new Set();
@@ -92,7 +129,14 @@ export function runEntityOrphan(opts) {
     const now = opts.now ?? new Date();
     const findings = [];
     const orphans = [];
-    const cited = collectCitedIds(opts.repoRoot);
+    // Ghost: liveness keys on the out-of-repo scope-index binding, NEVER on
+    // in-source `§` cites (there are none — the naive cite scan would orphan the
+    // entire ledger on the first sweep). Skip the source walk entirely.
+    const ghost = isGhost(opts.repoRoot);
+    const cited = ghost ? new Set() : collectCitedIds(opts.repoRoot);
+    const scopeIdx = ghost ? readScopeIndex(opts.repoRoot) : null;
+    // One resolver for the whole sweep — walks each clustered source file once.
+    const resolveBlock = ghost ? makeGhostBlockResolver(opts.repoRoot) : null;
     const groups = [
         { kind: "DEC", dir: decisionsDir(opts.repoRoot), rel: ".cairn/ground/decisions" },
         { kind: "INV", dir: invariantsDir(opts.repoRoot), rel: ".cairn/ground/invariants" },
@@ -137,18 +181,28 @@ export function runEntityOrphan(opts) {
                 }
             }
             else {
-                // ledger-backed — keyed on live citation presence.
-                if (!cited.has(id)) {
+                // ledger-backed — liveness:
+                //   committed: a live in-source `§` cite for this id
+                //   ghost:     the governing comment block still resolves by content
+                //              hash in its source file (no cites exist — §3.5.1)
+                const live = ghost
+                    ? entityGhostLive(opts.repoRoot, id, fm, scopeIdx, resolveBlock)
+                    : cited.has(id);
+                if (!live) {
                     const sourceFile = typeof fm["source_file"] === "string" ? fm["source_file"] : "";
                     const srcGone = sourceFile.length === 0 || !existsSync(join(opts.repoRoot, sourceFile));
+                    // Ghost never auto-retires (no `safe`): there are no cites to confirm
+                    // removal, so an unbound entity is surfaced for operator review only.
                     candidate = {
                         id,
                         kind: group.kind,
                         sotKind,
-                        classification: srcGone ? "safe" : "ambiguous",
-                        reason: srcGone
-                            ? "orphan-by-source: source_file gone and zero live §cites remain"
-                            : "orphan-by-source: zero live §cites remain (source_file still present — review)",
+                        classification: ghost ? "ambiguous" : srcGone ? "safe" : "ambiguous",
+                        reason: ghost
+                            ? "ghost: governing comment block no longer resolves by content hash (review — never auto-retired)"
+                            : srcGone
+                                ? "orphan-by-source: source_file gone and zero live §cites remain"
+                                : "orphan-by-source: zero live §cites remain (source_file still present — review)",
                         entityPath,
                     };
                 }

package/dist/gc/entity-orphan.js.map

@@ -1 +1 @@
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package/dist/gc/ghost-anchor.d.ts

@@ -0,0 +1,57 @@
+/**
+ * Ghost content-hash anchoring (ghost-mode design).
+ *
+ * In committed mode a `// §DEC-<hash>` cite binds a code location to its
+ * decision and moves with the code. Ghost never writes that cite, so the
+ * binding lives out-of-repo and the *block* has to be re-located by content:
+ * the operator's decision comment stays verbatim in source (strip-replace is a
+ * no-op in ghost), and its body hash is the stable, location-independent key.
+ *
+ * Two consumers:
+ *   - `resolveGhostBlock` — read-only liveness probe. Does a comment block whose
+ *     body hashes to `contentHash` still exist in `sourceFile`? GC liveness
+ *     (§3.6) keys on this instead of mere bound-file existence, so a deleted /
+ *     rewritten comment correctly reads as orphaned even when the file remains.
+ *   - `runGhostReanchor` — the re-anchor-on-reconcile pass. When a still-live
+ *     block has *moved* (same hash, new line range), silently refresh the
+ *     anchor-map `line_range`. Runs in the GC sweep — the periodic ghost analog
+ *     of the cite that would otherwise move with the code.
+ *
+ * Both reuse the SAME comment extraction + `bodyContentHash` normalization the
+ * Layer A emit used, so a re-hash lines up with the stored `sot_content_hash`.
+ * Committed mode never calls these (the cite is the binding); every entry point
+ * is `isGhost`-gated.
+ */
+export interface GhostBlockResolution {
+    /** A comment block whose body hashes to `contentHash` still exists. */
+    found: boolean;
+    /** Fresh `[startLine, endLine]` of that block, or null when not found. */
+    lineRange: [number, number] | null;
+}
+/**
+ * Re-locate a governed comment block in `sourceFile` by its body hash. Pure
+ * read — no writes. Location-independent: the block is found wherever it moved
+ * to within the file. Returns `found: false` when the file is gone, unreadable,
+ * an unknown language, or carries no block matching the hash (deleted/rewritten).
+ */
+export declare function resolveGhostBlock(repoRoot: string, sourceFile: string, contentHash: string): GhostBlockResolution;
+export type GhostBlockResolver = (sourceFile: string, contentHash: string) => GhostBlockResolution;
+/**
+ * Build a per-run resolver that walks each source file at most once. A GC sweep
+ * resolves many ledger entities that cluster into a few files; the bare
+ * `resolveGhostBlock` re-reads + re-hashes the file once per entity. Share one
+ * resolver across a sweep so each file is read once. Per-run scope (a fresh Map
+ * each call) — never a module-level cache, so it can't go stale between sweeps.
+ */
+export declare function makeGhostBlockResolver(repoRoot: string): GhostBlockResolver;
+export interface GhostReanchorResult {
+    /** Anchor entries whose `line_range` was refreshed because the block moved. */
+    reanchored: number;
+}
+/**
+ * Re-anchor-on-reconcile (§3.5.1). For every live ghost ledger entity whose
+ * comment block has moved within its file, refresh the anchor-map `line_range`
+ * so the (future) lens decorates the right span. Idempotent — writes only when
+ * a range actually changed. No-op (and no entity walk) outside ghost.
+ */
+export declare function runGhostReanchor(repoRoot: string): GhostReanchorResult;

package/dist/gc/ghost-anchor.js

@@ -0,0 +1,171 @@
+/**
+ * Ghost content-hash anchoring (ghost-mode design).
+ *
+ * In committed mode a `// §DEC-<hash>` cite binds a code location to its
+ * decision and moves with the code. Ghost never writes that cite, so the
+ * binding lives out-of-repo and the *block* has to be re-located by content:
+ * the operator's decision comment stays verbatim in source (strip-replace is a
+ * no-op in ghost), and its body hash is the stable, location-independent key.
+ *
+ * Two consumers:
+ *   - `resolveGhostBlock` — read-only liveness probe. Does a comment block whose
+ *     body hashes to `contentHash` still exist in `sourceFile`? GC liveness
+ *     (§3.6) keys on this instead of mere bound-file existence, so a deleted /
+ *     rewritten comment correctly reads as orphaned even when the file remains.
+ *   - `runGhostReanchor` — the re-anchor-on-reconcile pass. When a still-live
+ *     block has *moved* (same hash, new line range), silently refresh the
+ *     anchor-map `line_range`. Runs in the GC sweep — the periodic ghost analog
+ *     of the cite that would otherwise move with the code.
+ *
+ * Both reuse the SAME comment extraction + `bodyContentHash` normalization the
+ * Layer A emit used, so a re-hash lines up with the stored `sot_content_hash`.
+ * Committed mode never calls these (the cite is the binding); every entry point
+ * is `isGhost`-gated.
+ */
+import { existsSync, readFileSync, readdirSync } from "node:fs";
+import { join } from "node:path";
+import { bodyContentHash, decisionsDir, invariantsDir, isGhost, parseFrontmatterRecord, readAnchorMap, setAnchor, writeAnchorMap, } from "@isaacriehm/cairn-state";
+import { walkSourceComments } from "../init/source-comments/walker.js";
+/**
+ * Re-locate a governed comment block in `sourceFile` by its body hash. Pure
+ * read — no writes. Location-independent: the block is found wherever it moved
+ * to within the file. Returns `found: false` when the file is gone, unreadable,
+ * an unknown language, or carries no block matching the hash (deleted/rewritten).
+ */
+export function resolveGhostBlock(repoRoot, sourceFile, contentHash) {
+    if (sourceFile.length === 0 || contentHash.length !== 64) {
+        return { found: false, lineRange: null };
+    }
+    const byHash = walkBlockHashes(repoRoot, sourceFile);
+    return lookupBlock(byHash, contentHash);
+}
+/** One source file walked once → `body content-hash → [startLine, endLine]`. */
+function walkBlockHashes(repoRoot, sourceFile) {
+    if (!existsSync(join(repoRoot, sourceFile)))
+        return null;
+    let blocks;
+    try {
+        blocks = walkSourceComments({ repoRoot, onlyFiles: [sourceFile] }).blocks;
+    }
+    catch {
+        return null;
+    }
+    const m = new Map();
+    for (const b of blocks) {
+        const h = bodyContentHash(b.prose);
+        if (!m.has(h))
+            m.set(h, [b.startLine, b.endLine]);
+    }
+    return m;
+}
+function lookupBlock(byHash, contentHash) {
+    if (byHash === null)
+        return { found: false, lineRange: null };
+    const range = byHash.get(contentHash);
+    return range ? { found: true, lineRange: range } : { found: false, lineRange: null };
+}
+/**
+ * Build a per-run resolver that walks each source file at most once. A GC sweep
+ * resolves many ledger entities that cluster into a few files; the bare
+ * `resolveGhostBlock` re-reads + re-hashes the file once per entity. Share one
+ * resolver across a sweep so each file is read once. Per-run scope (a fresh Map
+ * each call) — never a module-level cache, so it can't go stale between sweeps.
+ */
+export function makeGhostBlockResolver(repoRoot) {
+    const cache = new Map();
+    return (sourceFile, contentHash) => {
+        if (sourceFile.length === 0 || contentHash.length !== 64) {
+            return { found: false, lineRange: null };
+        }
+        let byHash = cache.get(sourceFile);
+        if (byHash === undefined) {
+            byHash = walkBlockHashes(repoRoot, sourceFile);
+            cache.set(sourceFile, byHash);
+        }
+        return lookupBlock(byHash, contentHash);
+    };
+}
+/** Active ledger entities (DEC + INV) that carry a source-comment anchor. */
+function collectGhostLedgerEntities(repoRoot) {
+    const out = [];
+    for (const dir of [decisionsDir(repoRoot), invariantsDir(repoRoot)]) {
+        let names;
+        try {
+            names = readdirSync(dir, { withFileTypes: true, encoding: "utf8" })
+                .filter((d) => d.isFile() && d.name.endsWith(".md") && !d.name.startsWith("_"))
+                .map((d) => d.name);
+        }
+        catch {
+            continue;
+        }
+        for (const name of names) {
+            let fm;
+            try {
+                fm = parseFrontmatterRecord(readFileSync(join(dir, name), "utf8")).fm;
+            }
+            catch {
+                continue;
+            }
+            if (fm["sot_kind"] !== "ledger")
+                continue;
+            const status = typeof fm["status"] === "string" ? fm["status"] : "";
+            if (status === "archived" || status === "superseded")
+                continue;
+            const sourceFile = typeof fm["source_file"] === "string" ? fm["source_file"] : "";
+            const contentHash = typeof fm["sot_content_hash"] === "string" ? fm["sot_content_hash"] : "";
+            if (sourceFile.length === 0 || contentHash.length !== 64)
+                continue;
+            out.push({ sourceFile, contentHash });
+        }
+    }
+    return out;
+}
+/**
+ * Re-anchor-on-reconcile (§3.5.1). For every live ghost ledger entity whose
+ * comment block has moved within its file, refresh the anchor-map `line_range`
+ * so the (future) lens decorates the right span. Idempotent — writes only when
+ * a range actually changed. No-op (and no entity walk) outside ghost.
+ */
+export function runGhostReanchor(repoRoot) {
+    if (!isGhost(repoRoot))
+        return { reanchored: 0 };
+    const entities = collectGhostLedgerEntities(repoRoot);
+    if (entities.length === 0)
+        return { reanchored: 0 };
+    let map = readAnchorMap(repoRoot);
+    let changed = false;
+    let reanchored = 0;
+    const resolveBlock = makeGhostBlockResolver(repoRoot);
+    for (const ent of entities) {
+        const res = resolveBlock(ent.sourceFile, ent.contentHash);
+        if (!res.found || res.lineRange === null)
+            continue;
+        // Find the anchor entry for this block by (file, content_hash) — the slug
+        // key is opaque here, but (file, hash) uniquely identifies the block.
+        for (const [slug, entry] of Object.entries(map.anchors)) {
+            if (entry.file !== ent.sourceFile || entry.content_hash !== ent.contentHash) {
+                continue;
+            }
+            const [ns, ne] = res.lineRange;
+            const cur = entry.line_range;
+            if (cur === undefined || cur[0] !== ns || cur[1] !== ne) {
+                map = setAnchor(map, slug, { ...entry, line_range: [ns, ne] });
+                changed = true;
+                reanchored += 1;
+            }
+            break;
+        }
+    }
+    if (changed) {
+        try {
+            writeAnchorMap(repoRoot, map);
+        }
+        catch {
+            // best-effort — a failed re-anchor write never blocks the sweep; the
+            // stale line_range only affects lens display, not liveness.
+            return { reanchored: 0 };
+        }
+    }
+    return { reanchored };
+}
+//# sourceMappingURL=ghost-anchor.js.map

package/dist/gc/ghost-anchor.js.map

@@ -0,0 +1 @@
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package/dist/gc/index.d.ts

@@ -32,6 +32,8 @@ export { extractSectionByAnchor, runDocSourceDrift, slugifyHeading, } from "./do
 export type { DocSourceDriftOptions, DocSourceDriftResult, } from "./doc-source-drift.js";
 export { runEntityOrphan } from "./entity-orphan.js";
 export type { EntityOrphanOptions, EntityOrphanResult, OrphanCandidate, OrphanClassification, } from "./entity-orphan.js";
+export { resolveGhostBlock, runGhostReanchor } from "./ghost-anchor.js";
+export type { GhostBlockResolution, GhostReanchorResult, } from "./ghost-anchor.js";
 export { runEntityRetire } from "./retire.js";
 export type { EntityRetireOptions, EntityRetireResult, } from "./retire.js";
 export { runFrontmatterFreshness, } from "./frontmatter.js";

package/dist/gc/index.js

@@ -23,6 +23,7 @@ export { runDocClaimsVsRuntime } from "./doc-claims.js";
 export { runDocGardening } from "./doc-gardening.js";
 export { extractSectionByAnchor, runDocSourceDrift, slugifyHeading, } from "./doc-source-drift.js";
 export { runEntityOrphan } from "./entity-orphan.js";
+export { resolveGhostBlock, runGhostReanchor } from "./ghost-anchor.js";
 export { runEntityRetire } from "./retire.js";
 export { runFrontmatterFreshness, } from "./frontmatter.js";
 export { runGeneratorDrift } from "./generator-drift.js";

package/dist/gc/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/gc/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;GAeG;AAYH,OAAO,EAAE,WAAW,EAAE,MAAM,YAAY,CAAC;AAEzC,OAAO,EAAE,WAAW,IAAI,iBAAiB,EAAE,MAAM,aAAa,CAAC;AAK/D,OAAO,EAAE,oBAAoB,EAAE,MAAM,yBAAyB,CAAC;AAC/D,OAAO,EAAE,iBAAiB,EAAE,MAAM,eAAe,CAAC;AAElD,OAAO,EAAE,sBAAsB,EAAE,MAAM,2BAA2B,CAAC;AAKnE,OAAO,EAAE,qBAAqB,EAAE,MAAM,iBAAiB,CAAC;AAOxD,OAAO,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAKrD,OAAO,EACL,sBAAsB,EACtB,iBAAiB,EACjB,cAAc,GACf,MAAM,uBAAuB,CAAC;AAK/B,OAAO,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAOrD,OAAO,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAK9C,OAAO,EACL,uBAAuB,GACxB,MAAM,kBAAkB,CAAC;AAK1B,OAAO,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AAKzD,OAAO,EAAE,gBAAgB,IAAI,sBAAsB,EAAE,MAAM,qBAAqB,CAAC;AAIjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,uBAAuB,CAAC;AAK7D,OAAO,EAAE,gBAAgB,EAAE,MAAM,qBAAqB,CAAC;AAKvD,OAAO,EAAE,kBAAkB,EAAE,MAAM,gBAAgB,CAAC;AAIpD,OAAO,EAAE,UAAU,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAKpD,OAAO,EAAE,cAAc,EAAE,qBAAqB,EAAE,MAAM,kBAAkB,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/gc/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;GAeG;AAYH,OAAO,EAAE,WAAW,EAAE,MAAM,YAAY,CAAC;AAEzC,OAAO,EAAE,WAAW,IAAI,iBAAiB,EAAE,MAAM,aAAa,CAAC;AAK/D,OAAO,EAAE,oBAAoB,EAAE,MAAM,yBAAyB,CAAC;AAC/D,OAAO,EAAE,iBAAiB,EAAE,MAAM,eAAe,CAAC;AAElD,OAAO,EAAE,sBAAsB,EAAE,MAAM,2BAA2B,CAAC;AAKnE,OAAO,EAAE,qBAAqB,EAAE,MAAM,iBAAiB,CAAC;AAOxD,OAAO,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAKrD,OAAO,EACL,sBAAsB,EACtB,iBAAiB,EACjB,cAAc,GACf,MAAM,uBAAuB,CAAC;AAK/B,OAAO,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAOrD,OAAO,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,MAAM,mBAAmB,CAAC;AAKxE,OAAO,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAK9C,OAAO,EACL,uBAAuB,GACxB,MAAM,kBAAkB,CAAC;AAK1B,OAAO,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AAKzD,OAAO,EAAE,gBAAgB,IAAI,sBAAsB,EAAE,MAAM,qBAAqB,CAAC;AAIjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,uBAAuB,CAAC;AAK7D,OAAO,EAAE,gBAAgB,EAAE,MAAM,qBAAqB,CAAC;AAKvD,OAAO,EAAE,kBAAkB,EAAE,MAAM,gBAAgB,CAAC;AAIpD,OAAO,EAAE,UAAU,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAKpD,OAAO,EAAE,cAAc,EAAE,qBAAqB,EAAE,MAAM,kBAAkB,CAAC"}

package/dist/gc/sweep.d.ts

@@ -1,7 +1,7 @@
 /**
  * Sweep + batch entry points for GC.
  *
- * `runGcSweep` composes all five passes against a repo root and returns the
+ * `runGcSweep` composes all twelve passes against a repo root and returns the
  * aggregated `GcSweepResult` (findings + commit proposals). Callers decide
  * whether to apply.
  *

package/dist/gc/sweep.js

@@ -1,7 +1,7 @@
 /**
  * Sweep + batch entry points for GC.
  *
- * `runGcSweep` composes all five passes against a repo root and returns the
+ * `runGcSweep` composes all twelve passes against a repo root and returns the
  * aggregated `GcSweepResult` (findings + commit proposals). Callers decide
  * whether to apply.
  *
@@ -24,6 +24,7 @@ import { runDocClaimsVsRuntime } from "./doc-claims.js";
 import { runDocGardening } from "./doc-gardening.js";
 import { runDocSourceDrift } from "./doc-source-drift.js";
 import { runEntityOrphan } from "./entity-orphan.js";
+import { runGhostReanchor } from "./ghost-anchor.js";
 import { runFrontmatterFreshness } from "./frontmatter.js";
 import { runGeneratorDrift } from "./generator-drift.js";
 import { runQualityUpdate } from "./quality-update.js";
@@ -48,6 +49,7 @@ export async function runGcSweep(opts) {
         "attested-commits-pruning": 0,
         "doc-claims-vs-runtime": 0,
         "doc-source-drift": 0,
+        "ghost-reanchor": 0,
         "entity-orphan": 0,
     };
     // 1. Frontmatter freshness.
@@ -142,6 +144,16 @@ export async function runGcSweep(opts) {
         findings.push(...r.findings);
         passDurations["doc-source-drift"] = Date.now() - t0;
     }
+    // 11.5. Ghost re-anchor — refresh anchor-map line ranges for governed comment
+    // blocks that moved within their file (§3.5.1). No-op (and no entity walk)
+    // outside ghost. Runs before entity-orphan so liveness reads a fresh map;
+    // liveness itself is location-independent (content-hash), so ordering is only
+    // a freshness nicety for the lens.
+    {
+        const t0 = Date.now();
+        runGhostReanchor(opts.repoRoot);
+        passDurations["ghost-reanchor"] = Date.now() - t0;
+    }
     // 12. Entity-orphan — ledger → code; surface DEC/INV that no longer have
     // a live home. Findings only; the safe subset is retired by the
     // `cairn gc retire` apply path, not auto-merged as a Gc proposal.

package/dist/gc/sweep.js.map

@@ -1 +1 @@
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package/dist/gc/types.d.ts

@@ -22,7 +22,7 @@
  *                 reviewer + UAT 🟢 → push.
  *   high-stakes — touches projectGlobs.high_stakes_globs. Above + E2E + Layer E.
  */
-export type GcPassId = "frontmatter-freshness" | "generator-drift" | "stub-catalog-hits" | "doc-gardening" | "quality-grades" | "scope-coverage" | "completion-integrity" | "citation-integrity" | "attested-commits-pruning" | "doc-claims-vs-runtime" | "doc-source-drift" | "entity-orphan";
+export type GcPassId = "frontmatter-freshness" | "generator-drift" | "stub-catalog-hits" | "doc-gardening" | "quality-grades" | "scope-coverage" | "completion-integrity" | "citation-integrity" | "attested-commits-pruning" | "doc-claims-vs-runtime" | "doc-source-drift" | "ghost-reanchor" | "entity-orphan";
 export type GcFindingKind = "frontmatter_stale" | "generator_drift" | "stub_hit" | "broken_link" | "orphan_path" | "quality_update" | "scope_uncovered" | "scope_drift_orphan" | "scope_index_missing" | "task_integrity_error" | "orphaned_citation" | "stale_citation" | "quality_grades_rebuilt" | "superseded_citation" | "doc_claim_drift" | "doc_source_drift" | "sot_missing" | "sot_anchor_missing" | "orphan_entity";
 export type GcAutoMergeClass = "safe" | "code" | "high-stakes";
 export interface GcFinding {

package/dist/hooks/bypass-detection.js

@@ -23,6 +23,7 @@
 import { execFileSync } from "node:child_process";
 import { existsSync, readFileSync } from "node:fs";
 import { join } from "node:path";
+import { cairnDir } from "@isaacriehm/cairn-state";
 const HEAD_LOOKBACK = 5;
 const NUL = "\x00";
 export function scanBypassedCommits(repoRoot) {
@@ -43,7 +44,7 @@ export function scanBypassedCommits(repoRoot) {
     return {
         bypassed,
         inspected: recent.length,
-        attestedFileExists: existsSync(join(repoRoot, ".cairn", ".attested-commits")),
+        attestedFileExists: existsSync(cairnDir(repoRoot, ".attested-commits")),
     };
 }
 export function renderBypassHint(bypassed) {
@@ -100,7 +101,7 @@ function readRecentHead(repoRoot) {
     }
 }
 function readAttestedCommits(repoRoot) {
-    const path = join(repoRoot, ".cairn", ".attested-commits");
+    const path = cairnDir(repoRoot, ".attested-commits");
     if (!existsSync(path))
         return new Set();
     try {

package/dist/hooks/bypass-detection.js.map

@@ -1 +1 @@
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+{"version":3,"file":"bypass-detection.js","sourceRoot":"","sources":["../../src/hooks/bypass-detection.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;GAqBG;AAEH,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,UAAU,EAAE,YAAY,EAAE,MAAM,SAAS,CAAC;AACnD,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AACjC,OAAO,EAAE,QAAQ,EAAE,MAAM,yBAAyB,CAAC;AAgBnD,MAAM,aAAa,GAAG,CAAC,CAAC;AACxB,MAAM,GAAG,GAAG,MAAM,CAAC;AAEnB,MAAM,UAAU,mBAAmB,CAAC,QAAgB;IAClD,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,EAAE,MAAM,CAAC,CAAC,EAAE,CAAC;QACxC,OAAO,EAAE,QAAQ,EAAE,EAAE,EAAE,SAAS,EAAE,CAAC,EAAE,kBAAkB,EAAE,KAAK,EAAE,CAAC;IACnE,CAAC;IACD,MAAM,MAAM,GAAG,cAAc,CAAC,QAAQ,CAAC,CAAC;IACxC,IAAI,MAAM,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACxB,OAAO,EAAE,QAAQ,EAAE,EAAE,EAAE,SAAS,EAAE,CAAC,EAAE,kBAAkB,EAAE,KAAK,EAAE,CAAC;IACnE,CAAC;IACD,MAAM,QAAQ,GAAG,mBAAmB,CAAC,QAAQ,CAAC,CAAC;IAC/C,MAAM,QAAQ,GAAqB,EAAE,CAAC;IACtC,KAAK,MAAM,CAAC,IAAI,MAAM,EAAE,CAAC;QACvB,IAAI,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,GAAG,CAAC;YAAE,SAAS;QAClC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACnB,CAAC;IACD,OAAO;QACL,QAAQ;QACR,SAAS,EAAE,MAAM,CAAC,MAAM;QACxB,kBAAkB,EAAE,UAAU,CAAC,QAAQ,CAAC,QAAQ,EAAE,mBAAmB,CAAC,CAAC;KACxE,CAAC;AACJ,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,QAA0B;IACzD,MAAM,KAAK,GAAa,EAAE,CAAC;IAC3B,MAAM,IAAI,GAAG,QAAQ,CAAC,MAAM,KAAK,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC;IAC1D,KAAK,CAAC,IAAI,CACR,cAAc,QAAQ,CAAC,MAAM,IAAI,IAAI,eAAe,CACrD,CAAC;IACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACf,KAAK,CAAC,IAAI,CACR,8FAA8F,CAC/F,CAAC;IACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACf,KAAK,CAAC,IAAI,CACR,uDAAuD,CACxD,CAAC;IACF,KAAK,CAAC,IAAI,CACR,2FAA2F,CAC5F,CAAC;IACF,KAAK,CAAC,IAAI,CACR,4EAA4E,CAC7E,CAAC;IACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACf,KAAK,MAAM,CAAC,IAAI,QAAQ,EAAE,CAAC;QACzB,KAAK,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,QAAQ,QAAQ,CAAC,CAAC,OAAO,EAAE,CAAC,CAAC;IACnD,CAAC;IACD,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACf,KAAK,CAAC,IAAI,CACR,6IAA6I,CAC9I,CAAC;IACF,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AAC1B,CAAC;AAED,gFAAgF;AAChF,gFAAgF;AAChF,gFAAgF;AAEhF,SAAS,cAAc,CAAC,QAAgB;IACtC,IAAI,CAAC;QACH,8DAA8D;QAC9D,kEAAkE;QAClE,mEAAmE;QACnE,uDAAuD;QACvD,EAAE;QACF,sEAAsE;QACtE,uEAAuE;QACvE,mEAAmE;QACnE,sEAAsE;QACtE,uEAAuE;QACvE,MAAM,GAAG,GAAG,YAAY,CACtB,KAAK,EACL,CAAC,KAAK,EAAE,KAAK,aAAa,EAAE,EAAE,mBAAmB,EAAE,MAAM,EAAE,OAAO,EAAE,WAAW,CAAC,EAChF,EAAE,GAAG,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,EAAE,KAAK,EAAE,CAAC,QAAQ,EAAE,MAAM,EAAE,QAAQ,CAAC,EAAE,CACzE,CAAC;QACF,MAAM,MAAM,GAAqB,EAAE,CAAC;QACpC,KAAK,MAAM,IAAI,IAAI,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC;YACnC,IAAI,IAAI,CAAC,MAAM,KAAK,CAAC;gBAAE,SAAS;YAChC,MAAM,MAAM,GAAG,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC;YACjC,IAAI,MAAM,KAAK,CAAC,CAAC;gBAAE,SAAS;YAC5B,MAAM,GAAG,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,EAAE,MAAM,CAAC,CAAC;YAClC,MAAM,OAAO,GAAG,IAAI,CAAC,KAAK,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC;YACvC,IAAI,GAAG,CAAC,MAAM,GAAG,CAAC;gBAAE,SAAS;YAC7B,MAAM,CAAC,IAAI,CAAC,EAAE,GAAG,EAAE,QAAQ,EAAE,GAAG,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC;QAC3D,CAAC;QACD,OAAO,MAAM,CAAC;IAChB,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,EAAE,CAAC;IACZ,CAAC;AACH,CAAC;AAED,SAAS,mBAAmB,CAAC,QAAgB;IAC3C,MAAM,IAAI,GAAG,QAAQ,CAAC,QAAQ,EAAE,mBAAmB,CAAC,CAAC;IACrD,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC;QAAE,OAAO,IAAI,GAAG,EAAE,CAAC;IACxC,IAAI,CAAC;QACH,MAAM,IAAI,GAAG,YAAY,CAAC,IAAI,EAAE,MAAM,CAAC,CAAC;QACxC,MAAM,GAAG,GAAG,IAAI,GAAG,EAAU,CAAC;QAC9B,KAAK,MAAM,GAAG,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC;YACnC,MAAM,IAAI,GAAG,GAAG,CAAC,IAAI,EAAE,CAAC;YACxB,IAAI,IAAI,CAAC,MAAM,KAAK,CAAC;gBAAE,SAAS;YAChC,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;QAChB,CAAC;QACD,OAAO,GAAG,CAAC;IACb,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,IAAI,GAAG,EAAE,CAAC;IACnB,CAAC;AACH,CAAC"}

package/dist/hooks/defer.js

@@ -13,8 +13,9 @@
  * Pure read/write/check helpers — no side effects beyond filesystem.
  */
 import { existsSync, mkdirSync, readFileSync, rmSync, writeFileSync } from "node:fs";
-import { dirname, join } from "node:path";
+import { dirname } from "node:path";
 import { z } from "zod";
+import { cairnDir } from "@isaacriehm/cairn-state";
 const DeferStateSchema = z.object({
     deferred_at: z.string(),
     deferred_for_hours: z.number(),
@@ -23,7 +24,7 @@ const DeferStateSchema = z.object({
 });
 const DEFAULT_DEFER_HOURS = 24;
 export function deferStatePath(repoRoot, kind) {
-    return join(repoRoot, ".cairn", `.${kind}-deferred-until`);
+    return cairnDir(repoRoot, `.${kind}-deferred-until`);
 }
 export function readDeferState(repoRoot, kind) {
     const path = deferStatePath(repoRoot, kind);

package/dist/hooks/defer.js.map

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