@iowarp/clio-coder 0.4.6 → 0.4.8

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1142) hide show
  1. package/.claude-plugin/marketplace.json +283 -0
  2. package/CHANGELOG.md +79 -0
  3. package/CONTRIBUTING.md +178 -96
  4. package/NOTICE +8 -0
  5. package/README.md +100 -47
  6. package/dist/acp-JWPQZM2D.js +130 -0
  7. package/dist/agents-4GCDIRVX.js +149 -0
  8. package/dist/assets/codewiki.json +1 -1
  9. package/dist/assets/tui-notices/get-east-asian-width-LICENSE +9 -0
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  11. package/dist/assets/tui-notices/pi-tui-LICENSE +21 -0
  12. package/dist/assets/web-notices/@hono__node-server-LICENSE +21 -0
  13. package/dist/assets/web-notices/hono-LICENSE +21 -0
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  1050. package/skills/coding/ast-grep/SKILL.md +0 -213
  1051. package/skills/coding/ast-grep/evals.md +0 -82
  1052. package/skills/coding/coding-standards/SKILL.md +0 -164
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  1054. package/skills/coding/prototype/SKILL.md +0 -151
  1055. package/skills/coding/prototype/evals.md +0 -61
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  1057. package/skills/coding/tdd/evals.md +0 -61
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  1059. package/skills/context/context-handoff/evals.md +0 -101
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  1061. package/skills/context/context-prime/evals.md +0 -99
  1062. package/skills/git/branch-closeout/SKILL.md +0 -132
  1063. package/skills/git/file-ticket/SKILL.md +0 -126
  1064. package/skills/git/fix-issue/SKILL.md +0 -136
  1065. package/skills/git/resolve-merge-conflicts/SKILL.md +0 -151
  1066. package/skills/git/resolve-merge-conflicts/evals.md +0 -85
  1067. package/skills/git/ship/SKILL.md +0 -134
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  1069. package/skills/git/worktree-merge/SKILL.md +0 -147
  1070. package/skills/meta/clio-coder-dev/SKILL.md +0 -101
  1071. package/skills/meta/clio-coder-dev/evals.md +0 -46
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  1073. package/skills/meta/clio-coder-test/evals.md +0 -48
  1074. package/skills/meta/clio-coder-test/references/test-map.md +0 -96
  1075. package/skills/meta/credentials/SKILL.md +0 -132
  1076. package/skills/meta/credentials/evals.md +0 -104
  1077. package/skills/meta/find-skills/SKILL.md +0 -78
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  1079. package/skills/meta/herdr/SKILL.md +0 -133
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  1083. package/skills/planning/archify/SKILL.md +0 -196
  1084. package/skills/planning/architecture/SKILL.md +0 -184
  1085. package/skills/planning/architecture/evals.md +0 -101
  1086. package/skills/planning/backlog/SKILL.md +0 -212
  1087. package/skills/planning/backlog/evals.md +0 -185
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  1089. package/skills/planning/prd/evals.md +0 -103
  1090. package/skills/planning/product-intent/SKILL.md +0 -173
  1091. package/skills/planning/product-intent/evals.md +0 -106
  1092. package/skills/planning/tech-spec/SKILL.md +0 -172
  1093. package/skills/planning/tech-spec/evals.md +0 -120
  1094. package/skills/registry.yaml +0 -144
  1095. package/skills/remote.yaml +0 -13
  1096. package/skills/research/arxiv-literature/SKILL.md +0 -168
  1097. package/skills/research/arxiv-literature/evals.md +0 -108
  1098. package/skills/research/experiment-protocol/SKILL.md +0 -148
  1099. package/skills/research/experiment-protocol/evals.md +0 -114
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  1102. package/skills/research/scientific-modernization/SKILL.md +0 -170
  1103. package/skills/research/scientific-modernization/evals.md +0 -111
  1104. package/skills/skill-marketplace.json +0 -507
  1105. package/skills/workflow/cut-it/SKILL.md +0 -153
  1106. package/skills/workflow/cut-it/evals.md +0 -143
  1107. package/skills/workflow/design-council/SKILL.md +0 -233
  1108. package/skills/workflow/design-council/evals.md +0 -258
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  1110. package/skills/workflow/grill-me/evals.md +0 -231
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  1112. package/skills/workflow/workflow-distiller/evals.md +0 -225
  1113. package/src/domains/extensions/resource-path.ts +0 -27
  1114. package/src/domains/extensions/resources.ts +0 -37
  1115. package/src/domains/lifecycle/migrations/2026-09-01-extension-install-digests.ts +0 -27
  1116. package/src/interactive/overlays/agents.ts +0 -70
  1117. package/src/interactive/overlays/library-install-confirm.ts +0 -152
  1118. package/src/interactive/overlays/prompts.ts +0 -89
  1119. package/src/interactive/overlays/skills-hub.ts +0 -615
  1120. /package/{skills → library/skills}/coding/ast-grep/references/rule_reference.md +0 -0
  1121. /package/{skills → library/skills}/coding/prototype/references/LOGIC.md +0 -0
  1122. /package/{skills → library/skills}/coding/prototype/references/UI.md +0 -0
  1123. /package/{skills → library/skills}/coding/tdd/references/mocking.md +0 -0
  1124. /package/{skills → library/skills}/coding/tdd/references/tests.md +0 -0
  1125. /package/{skills → library/skills}/context/context-handoff/scripts/new-handoff.sh +0 -0
  1126. /package/{skills → library/skills}/git/branch-closeout/evals.md +0 -0
  1127. /package/{skills → library/skills}/git/branch-closeout/references/closeout-checklist.md +0 -0
  1128. /package/{skills → library/skills}/git/file-ticket/assets/issue-template.md +0 -0
  1129. /package/{skills → library/skills}/git/file-ticket/evals.md +0 -0
  1130. /package/{skills → library/skills}/git/file-ticket/references/issue-discovery.md +0 -0
  1131. /package/{skills → library/skills}/git/fix-issue/evals.md +0 -0
  1132. /package/{skills → library/skills}/git/fix-issue/references/diagnosis-and-rca.md +0 -0
  1133. /package/{skills → library/skills}/git/resolve-merge-conflicts/references/conflict-matrix.md +0 -0
  1134. /package/{skills → library/skills}/git/ship/assets/pr-template.md +0 -0
  1135. /package/{skills → library/skills}/git/ship/evals.md +0 -0
  1136. /package/{skills → library/skills}/git/ship/references/remote-and-branch-policy.md +0 -0
  1137. /package/{skills → library/skills}/git/worktree-create/evals.md +0 -0
  1138. /package/{skills → library/skills}/git/worktree-create/references/worktree-setup.md +0 -0
  1139. /package/{skills → library/skills}/git/worktree-merge/evals.md +0 -0
  1140. /package/{skills → library/skills}/git/worktree-merge/references/merge-strategies.md +0 -0
  1141. /package/{skills → library/skills}/meta/clio-coder-test/references/harness.md +0 -0
  1142. /package/{skills → library/skills}/planning/archify/evals.md +0 -0
@@ -3,42 +3,22 @@ import path from "node:path";
3
3
  import { warnLegacyNaming } from "../../../core/naming-compat.js";
4
4
  import { resolvePackageRoot } from "../../../core/package-root.js";
5
5
  import { clioConfigDir } from "../../../core/xdg.js";
6
- import {
7
- type InstallSkillInput,
8
- type InstallSkillResult,
9
- installSkillFromSource,
10
- isSkillName,
11
- parseSkillSourceSpec,
12
- type SkillInstallShaping,
13
- } from "./install.js";
6
+ import { pluginResourcePath, readPluginManifest } from "../../plugins/index.js";
7
+ import { discoverLibrary, installLibraryPlan, planLibraryInstall, resolveLibraryPackage } from "../library.js";
8
+ import type { InstallSkillInput, InstallSkillResult, SkillInstallShaping } from "./install.js";
14
9
  import { loadSkills, type Skill } from "./loader.js";
15
10
 
16
11
  /**
17
- * Local skill marketplace. Entries come from two real sources only:
18
- *
19
- * 1. A catalog directory of actual SKILL.md packages: CLIO_CODER_SKILL_CATALOG_DIR,
20
- * else a repo-level skills/ folder in the working tree, else the skills/
21
- * catalog the installed clio-coder package carries. Metadata is read from
22
- * the packages themselves via the normal skill loader.
23
- * 2. A JSON index file: CLIO_CODER_SKILL_MARKETPLACE_INDEX, else
24
- * <config>/skill-marketplace.json, else the skill-marketplace.json the
25
- * package carries. Entries point at installable sources.
26
- *
27
- * The package fallbacks are what make a fresh npm install a marketplace at
28
- * all: before them, an operator outside this repository with no env var set
29
- * had no catalog and no index, so every bare-name install and every
30
- * `/skill <name>` for a catalog skill failed. The package catalog is a
31
- * marketplace source only, never a discovery root; catalog skills stay
32
- * uninstalled until the operator asks, and install copies them out of the
33
- * package into a Clio root without touching the network.
34
- *
35
- * There is no synthetic or hardcoded marketplace data; an empty result means
36
- * no marketplace is configured.
12
+ * Skill-facing adapter for the canonical library, plus explicit authoring probes
13
+ * of unmanaged source trees. Runtime offers and activation use the library;
14
+ * only an explicit catalogDir/indexPath request invokes a raw source audit.
37
15
  */
38
16
 
39
17
  export type MarketplaceSkillOrigin = "catalog" | "index";
40
- export type LibraryEntryKind = "skill" | "agent" | "prompt" | "fleet";
41
- export type LibraryRequirementRef = `${LibraryEntryKind}:${string}`;
18
+
19
+ import type { LibraryEntryKind, LibraryRequirementRef } from "../library-types.js";
20
+
21
+ export type { LibraryEntryKind, LibraryRequirementRef } from "../library-types.js";
42
22
 
43
23
  /**
44
24
  * The diagnostic that means "nothing is wrong, nothing is configured". Callers
@@ -48,10 +28,10 @@ export type LibraryRequirementRef = `${LibraryEntryKind}:${string}`;
48
28
  export const MARKETPLACE_UNCONFIGURED = "no local skill marketplace catalog or index configured";
49
29
 
50
30
  export interface MarketplaceSkill {
51
- kind: LibraryEntryKind;
31
+ kind: Exclude<LibraryEntryKind, "plugin">;
52
32
  name: string;
53
33
  description: string;
54
- /** Local path or URL accepted by `clio-coder skills install`. */
34
+ /** Local path or URL accepted by `clio-coder library install`. */
55
35
  sourceUrl: string;
56
36
  version?: string;
57
37
  audit?: "pass" | "warn" | "fail" | "unknown";
@@ -96,7 +76,7 @@ export interface DiscoverMarketplaceOptions {
96
76
  */
97
77
  function packageCatalogDir(): string | null {
98
78
  try {
99
- return path.join(resolvePackageRoot(), "skills");
79
+ return path.join(resolvePackageRoot(), "library", "skills");
100
80
  } catch {
101
81
  return null;
102
82
  }
@@ -104,7 +84,7 @@ function packageCatalogDir(): string | null {
104
84
 
105
85
  function packageIndexPath(): string | null {
106
86
  try {
107
- return path.join(resolvePackageRoot(), "skills", "skill-marketplace.json");
87
+ return path.join(resolvePackageRoot(), "library", "skills", "skill-marketplace.json");
108
88
  } catch {
109
89
  return null;
110
90
  }
@@ -250,6 +230,8 @@ function resolveCatalogDir(options: DiscoverMarketplaceOptions): string | null {
250
230
  if (options.catalogDir) return path.resolve(options.catalogDir);
251
231
  const fromEnv = process.env.CLIO_CODER_SKILL_CATALOG_DIR;
252
232
  if (fromEnv && fromEnv.trim().length > 0) return path.resolve(fromEnv.trim());
233
+ const repoLibraryCatalog = path.join(options.cwd ?? process.cwd(), "library", "skills");
234
+ if (looksLikeSkillCatalog(repoLibraryCatalog)) return repoLibraryCatalog;
253
235
  const repoCatalog = path.join(options.cwd ?? process.cwd(), "skills");
254
236
  if (looksLikeSkillCatalog(repoCatalog)) return repoCatalog;
255
237
  // The package's own catalog: rows resolve to local files, so a bare-name
@@ -297,6 +279,15 @@ function catalogSkills(dir: string, diagnostics: string[]): MarketplaceSkill[] {
297
279
  }
298
280
 
299
281
  export function discoverMarketplaceSkills(options: DiscoverMarketplaceOptions = {}): MarketplaceDiscoveryResult {
282
+ // Automatic promotion and /skill consume the same pinned library as the CLI.
283
+ // Explicit source probes below support authoring audits of unmanaged skill trees.
284
+ if (options.indexPath === undefined && options.catalogDir === undefined) {
285
+ const library = discoverLibrary(options.cwd ? { cwd: options.cwd } : {});
286
+ const skills: MarketplaceSkill[] = library.entries
287
+ .filter((entry) => entry.kind === "skill" && entry.origin !== "installed")
288
+ .map((entry) => ({ ...entry, kind: "skill", origin: entry.origin === "index" ? "index" : "catalog" }));
289
+ return { status: skills.length ? "installable" : "unavailable", skills, diagnostics: library.diagnostics };
290
+ }
300
291
  const diagnostics: string[] = [];
301
292
  const skills: MarketplaceSkill[] = [];
302
293
  const seen = new Set<string>();
@@ -367,31 +358,31 @@ export function resolveMarketplaceShaping(options: DiscoverMarketplaceOptions =
367
358
  };
368
359
  }
369
360
 
370
- /**
371
- * The single install entry point for every frontend (headless CLI, TUI
372
- * pending-skill prompt, skills hub). Source resolution, in precedence order:
373
- *
374
- * 1. A GitHub URL installs directly.
375
- * 2. An existing local path installs directly; paths always beat same-named
376
- * marketplace entries.
377
- * 3. A bare skill name resolves through the local marketplace.
378
- *
379
- * Anything else is an error naming both failed interpretations. Overwriting
380
- * an existing install always requires an explicit `force: true`.
381
- */
361
+ /** Skill-offer adapter: resolve a package and commit through the shared library engine. */
382
362
  export function installSkill(input: InstallSkillInput): InstallSkillResult {
383
363
  const requested = input.source.trim();
384
364
  const source = requested === "clio-dev" ? "clio-coder-dev" : requested === "clio-test" ? "clio-coder-test" : requested;
385
365
  if (source !== requested) warnLegacyNaming(requested, source);
386
- const spec = parseSkillSourceSpec(source);
387
- if (spec?.kind === "local" && isSkillName(source) && !existsSync(spec.path)) {
388
- const skill = getMarketplaceSkills({ ...(input.cwd ? { cwd: input.cwd } : {}) }).find(
389
- (entry) => entry.name === source,
390
- );
391
- if (!skill) {
392
- throw new Error(`"${source}" is neither an existing local path nor available in the local marketplace`);
393
- }
394
- return installSkillFromSource({ ...input, ...marketplaceInstallShaping(skill), source: skill.sourceUrl });
395
- }
396
- return installSkillFromSource({ ...input, source });
366
+ if (input.overlay || input.exclude?.length || input.configDir)
367
+ throw new Error("package installs use the prepared manifest tree and the active Clio profile");
368
+ const entry = resolveLibraryPackage(source, input.cwd ? { cwd: input.cwd } : {});
369
+ if (entry.kind !== "skill") throw new Error(`expected a skill package, found ${entry.kind}:${entry.name}`);
370
+ if (input.name && input.name !== entry.name) throw new Error("package identities cannot be renamed at install");
371
+ const plan = planLibraryInstall(entry, {
372
+ ...(input.cwd ? { cwd: input.cwd } : {}),
373
+ scope: input.scope ?? "user",
374
+ force: input.force ?? false,
375
+ });
376
+ installLibraryPlan(plan);
377
+ const candidate = readPluginManifest(plan.path);
378
+ const component = candidate.manifest?.clio.components.find((item) => item.kind === "skill");
379
+ if (!component) throw new Error("installed skill package has no skill component");
380
+ return {
381
+ name: entry.name,
382
+ scope: input.scope ?? "user",
383
+ path: pluginResourcePath(plan.path, component.path),
384
+ sourceUrl: entry.sourceUrl,
385
+ installedHash: plan.sha256,
386
+ warnings: [],
387
+ };
397
388
  }
@@ -143,7 +143,7 @@ export function matchMarketplaceSkills(
143
143
  * is not the enforcement mechanism.
144
144
  *
145
145
  * This gates the promotion flow only. Operator-driven installs through
146
- * `clio-coder skills install <url>` keep their existing behavior.
146
+ * `clio-coder library install <url>` keep their existing behavior.
147
147
  */
148
148
  export const OWN_MARKETPLACE_URL_PREFIX = "https://github.com/iowarp/clio-coder/";
149
149
 
@@ -160,7 +160,7 @@ export function assertPromotionInstallSource(entry: MarketplaceSkill): void {
160
160
  throw new Error(
161
161
  `skill promotion: refusing to install "${entry.name}" from ${entry.sourceUrl}; ` +
162
162
  "promotion installs only from Clio's own marketplace (local catalog or " +
163
- `${OWN_MARKETPLACE_URL_PREFIX}). Install manually with clio-coder skills install if intended.`,
163
+ `${OWN_MARKETPLACE_URL_PREFIX}). Install manually with clio-coder library install if intended.`,
164
164
  );
165
165
  }
166
166
 
@@ -1,7 +1,7 @@
1
1
  /**
2
2
  * Local-first skill provenance pinning.
3
3
  *
4
- * `skills/registry.yaml` (regenerated with `npm run skills:pin`) pins the
4
+ * `library/skills/registry.yaml` (regenerated with `pnpm run skills:pin`) pins the
5
5
  * provenance-stripped sha256 of every marketplace skill's SKILL.md. At
6
6
  * activation time, a skill carrying marketplace provenance (`registry-id`
7
7
  * frontmatter) is compared against the pinned entry on the same normalized
@@ -16,6 +16,7 @@
16
16
  import { existsSync, readFileSync } from "node:fs";
17
17
  import path from "node:path";
18
18
  import yaml from "yaml";
19
+ import { resolvePackageRoot } from "../../../core/package-root.js";
19
20
 
20
21
  export const SKILL_PIN_MANIFEST_FILENAME = "registry.yaml";
21
22
 
@@ -34,9 +35,21 @@ function isPlainObject(value: unknown): value is Record<string, unknown> {
34
35
  /** Resolve the manifest path using the same catalog resolution as the marketplace. */
35
36
  function resolveSkillPinManifestPath(cwd: string): string | null {
36
37
  const fromEnv = process.env.CLIO_CODER_SKILL_CATALOG_DIR;
37
- const catalogDir = fromEnv && fromEnv.trim().length > 0 ? path.resolve(fromEnv.trim()) : path.join(cwd, "skills");
38
- const manifestPath = path.join(catalogDir, SKILL_PIN_MANIFEST_FILENAME);
39
- return existsSync(manifestPath) ? manifestPath : null;
38
+ if (fromEnv && fromEnv.trim().length > 0) {
39
+ const manifestPath = path.join(path.resolve(fromEnv.trim()), SKILL_PIN_MANIFEST_FILENAME);
40
+ return existsSync(manifestPath) ? manifestPath : null;
41
+ }
42
+ const repoLibraryManifest = path.join(cwd, "library", "skills", SKILL_PIN_MANIFEST_FILENAME);
43
+ if (existsSync(repoLibraryManifest)) return repoLibraryManifest;
44
+ const repoManifest = path.join(cwd, "skills", SKILL_PIN_MANIFEST_FILENAME);
45
+ if (existsSync(repoManifest)) return repoManifest;
46
+ try {
47
+ const bundledManifest = path.join(resolvePackageRoot(), "library", "skills", SKILL_PIN_MANIFEST_FILENAME);
48
+ if (existsSync(bundledManifest)) return bundledManifest;
49
+ } catch {
50
+ // Package root may be unavailable in isolated harnesses.
51
+ }
52
+ return null;
40
53
  }
41
54
 
42
55
  function loadSkillPinManifest(manifestPath: string): Map<string, SkillPinEntry> | null {
@@ -1,7 +1,7 @@
1
1
  import path from "node:path";
2
2
  import { artifactDefaultPath } from "../../core/artifact-paths.js";
3
3
  import { canonicalizeExistingPath } from "../../core/path-canonical.js";
4
- import { ToolNames } from "../../core/tool-names.js";
4
+ import { isHarnessExtensionToolName, ToolNames } from "../../core/tool-names.js";
5
5
  import { extractCommandCdTargets, extractCommandWriteTargets } from "./protected-artifacts.js";
6
6
 
7
7
  /**
@@ -129,7 +129,7 @@ function baseClassify(tool: string): ActionClass | null {
129
129
  case ToolNames.Steer:
130
130
  return "dispatch";
131
131
  default:
132
- return null;
132
+ return isHarnessExtensionToolName(tool) ? "execute" : null;
133
133
  }
134
134
  }
135
135
 
@@ -67,10 +67,12 @@ export const DEFAULT_DAMAGE_CONTROL_PATH_POLICY: PathPolicyInput = {
67
67
  // widen its own permissions in two tool calls. Both are authored by the
68
68
  // operator through the CLI (`clio-coder verifiers author` lands nothing
69
69
  // before `--yes`), so model-side writes and deletes are refused.
70
- // Skills also refuse model-side writes and deletes; installs go through `clio-coder skills install`.
70
+ // Skills also refuse model-side writes and deletes; installs go through `clio-coder library install`.
71
71
  ".clio-coder/safety.yaml",
72
72
  ".clio-coder/verifiers.yaml",
73
73
  ".clio-coder/skills/",
74
+ ".clio-coder/plugins/",
75
+ ".clio-coder/extensions/",
74
76
  "/etc/",
75
77
  "/usr/",
76
78
  "/bin/",
@@ -354,7 +354,7 @@ export function createSafetyPolicyEngine(options: SafetyPolicyEngineOptions = {}
354
354
  }
355
355
  const skillReason =
356
356
  mutationCommand !== null && invokesClioSkillMutation(mutationCommand)
357
- ? "skill installation and updates require the operator CLI or an explicit operator install choice; draft outside active skill roots"
357
+ ? "resource installation and lifecycle changes require the operator CLI or an explicit operator install choice; draft outside installed resource roots"
358
358
  : skillMutationReason(
359
359
  skillRoots,
360
360
  pathPolicyTargets(catalogCommand === null ? call : { tool: ToolNames.Bash, args: { command: catalogCommand } }),
@@ -416,7 +416,14 @@ export function invokesClioSkillMutation(command: string): boolean {
416
416
  args = args.slice(flag === "--skill" || flag === "--api-key" ? 2 : 1);
417
417
  }
418
418
  if (rootHelp) continue;
419
- if (args[0] !== "skills" && args[0] !== "library") continue;
419
+ if (
420
+ args[0] !== "skills" &&
421
+ args[0] !== "library" &&
422
+ args[0] !== "plugins" &&
423
+ args[0] !== "extensions" &&
424
+ args[0] !== "interop"
425
+ )
426
+ continue;
420
427
  if (resourceCliMutatesSkills(args[0], args.slice(1))) return true;
421
428
  }
422
429
  return false;
@@ -440,7 +447,10 @@ function shellCommandArguments(segment: ReadonlyArray<ShellToken>): string[] {
440
447
  return args.map((token) => token.value);
441
448
  }
442
449
 
443
- function resourceCliMutatesSkills(resource: "skills" | "library", args: ReadonlyArray<string>): boolean {
450
+ function resourceCliMutatesSkills(
451
+ resource: "skills" | "library" | "plugins" | "extensions" | "interop",
452
+ args: ReadonlyArray<string>,
453
+ ): boolean {
444
454
  // Both resource parsers accept flags before the verb. Consume their value
445
455
  // options so a catalog path called --yes or --help is not treated as a flag.
446
456
  const valueOptions =
@@ -449,6 +459,7 @@ function resourceCliMutatesSkills(resource: "skills" | "library", args: Readonly
449
459
  : ["--kind", "--from"];
450
460
  let verb: string | undefined;
451
461
  let confirmed = false;
462
+ let dryRun = false;
452
463
  for (let index = 0; index < args.length; index += 1) {
453
464
  const arg = args[index];
454
465
  if (arg === undefined) continue;
@@ -458,12 +469,17 @@ function resourceCliMutatesSkills(resource: "skills" | "library", args: Readonly
458
469
  }
459
470
  if (arg === "--help" || arg === "-h") return false;
460
471
  if (arg === "--yes") confirmed = true;
472
+ if (arg === "--dry-run") dryRun = true;
461
473
  if (!arg.startsWith("-")) verb ??= arg;
462
474
  }
463
475
  if (resource === "skills") return verb === "install" || verb === "update" || verb === "sync";
464
- // Unconfirmed library add only prints a plan. A confirmed add can install
465
- // skill dependencies of any resource kind, or resolve an untyped skill ref.
466
- return verb === "add" && confirmed;
476
+ if (resource === "plugins" || resource === "extensions")
477
+ return ["install", "update", "remove", "enable", "disable", "pin"].includes(verb ?? "");
478
+ if (resource === "interop") return verb === "adopt" && confirmed && !dryRun;
479
+ // A package of any kind may carry skills or require a skill dependency.
480
+ // Only install/update implement a dry-run; other mutations cannot spend it.
481
+ if ((verb === "install" || verb === "update") && dryRun) return false;
482
+ return ["install", "update", "remove", "enable", "disable", "pin", "register", "sync"].includes(verb ?? "");
467
483
  }
468
484
 
469
485
  const STANDARD_DEV_TARGETS = new Set(["/dev/null", "/dev/stdout", "/dev/stderr", "/dev/tty", "/dev/zero"]);
@@ -10,7 +10,10 @@ import { extractCommandCdTargets } from "./protected-artifacts.js";
10
10
  * may install or replace a symlink after the session starts. Reads stay allowed.
11
11
  */
12
12
  export function activeClioSkillRoots(cwd: string): string[] {
13
- return [path.join(cwd, ".clio-coder", "skills"), path.join(clioConfigDir(), "skills")];
13
+ return ["skills", "plugins", "extensions"].flatMap((kind) => [
14
+ path.join(cwd, ".clio-coder", kind),
15
+ path.join(clioConfigDir(), kind),
16
+ ]);
14
17
  }
15
18
 
16
19
  export function skillMutationReason(
@@ -40,7 +43,7 @@ export function skillMutationReason(
40
43
  isSameOrDescendant(candidate, boundary) ||
41
44
  (target.operation === "delete" && isSameOrDescendant(boundary, candidate))
42
45
  ) {
43
- return `active skill tree ${root} is operator-owned; draft changes outside active skill roots and ask the operator to install or update them`;
46
+ return `active resource tree ${root} is operator-owned; draft changes outside installed resource roots and use the operator install or update interface`;
44
47
  }
45
48
  }
46
49
  }
@@ -593,6 +593,9 @@ function addCompactionUsage(total: CompactionUsage | undefined, raw: unknown): C
593
593
  output: base.output + output,
594
594
  cacheRead: base.cacheRead + cacheRead,
595
595
  cacheWrite: base.cacheWrite + cacheWrite,
596
+ ...(base.cacheWrite1h === undefined && usage.cacheWrite1h === undefined
597
+ ? {}
598
+ : { cacheWrite1h: (base.cacheWrite1h ?? 0) + numberOrZero(usage.cacheWrite1h) }),
596
599
  reasoning: base.reasoning + numberOrZero(usage.reasoning),
597
600
  totalTokens: base.totalTokens + totalTokens,
598
601
  cost: { total: base.cost.total + numberOrZero(usage.cost?.total) },
@@ -605,7 +608,7 @@ function retainReportedUsage(previous: Record<string, unknown>, raw: unknown): R
605
608
  if (!raw || typeof raw !== "object" || Array.isArray(raw)) return previous;
606
609
  const usage = raw as Record<string, unknown>;
607
610
  const known = { ...previous };
608
- for (const field of ["input", "output", "cacheRead", "cacheWrite", "totalTokens"]) {
611
+ for (const field of ["input", "output", "cacheRead", "cacheWrite", "cacheWrite1h", "totalTokens"]) {
609
612
  const value = numberOrZero(usage[field]);
610
613
  if (value > 0) known[field] = value;
611
614
  }
@@ -114,6 +114,7 @@ export interface CompactionUsage {
114
114
  output: number;
115
115
  cacheRead: number;
116
116
  cacheWrite: number;
117
+ cacheWrite1h?: number;
117
118
  reasoning: number;
118
119
  totalTokens: number;
119
120
  cost: { total: number };
@@ -13,10 +13,8 @@
13
13
  * every surface's accounting, which is the same thing the tools/interactive
14
14
  * boundary rule exists to prevent.
15
15
  *
16
- * Assistant turns marked aborted or error are skipped for the same reason the
17
- * context estimator skips them: their usage is not a completed call. A
18
- * cancelled partial persists a fully populated all-zero usage object, so
19
- * counting it would add an API call worth nothing.
16
+ * Failed/aborted calls with reported usage still consumed resources. Skip
17
+ * only all-zero SDK placeholders, whose accounting was never observed.
20
18
  */
21
19
 
22
20
  import {
@@ -39,6 +37,7 @@ export interface LedgerUsageCall {
39
37
  output: number;
40
38
  cacheRead: number;
41
39
  cacheWrite: number;
40
+ cacheWrite1h?: number;
42
41
  reasoningTokens: number;
43
42
  totalTokens: number;
44
43
  costUsd: number;
@@ -58,7 +57,7 @@ function numberAt(source: Record<string, unknown>, key: string): number {
58
57
  }
59
58
 
60
59
  function reasoningTokensOf(usage: Record<string, unknown>): number {
61
- const direct = numberAt(usage, "reasoningTokens");
60
+ const direct = numberAt(usage, "reasoning") || numberAt(usage, "reasoningTokens");
62
61
  if (direct > 0) return direct;
63
62
  const details = usage.outputTokensDetails ?? usage.completionTokensDetails;
64
63
  if (details && typeof details === "object") return numberAt(details as Record<string, unknown>, "reasoningTokens");
@@ -109,6 +108,7 @@ export function ledgerUsageCalls(
109
108
  output: usage.output,
110
109
  cacheRead: usage.cacheRead,
111
110
  cacheWrite: usage.cacheWrite,
111
+ ...(usage.cacheWrite1h === undefined ? {} : { cacheWrite1h: usage.cacheWrite1h }),
112
112
  reasoningTokens: usage.reasoning,
113
113
  totalTokens: usage.totalTokens,
114
114
  costUsd: usage.cost.total,
@@ -129,8 +129,6 @@ export function ledgerUsageCalls(
129
129
  const payload = entry.payload;
130
130
  if (!payload || typeof payload !== "object" || Array.isArray(payload)) continue;
131
131
  const record = payload as Record<string, unknown>;
132
- const stopReason = record.stopReason;
133
- if (stopReason === "aborted" || stopReason === "error") continue;
134
132
  const rawUsage = record.usage;
135
133
  if (!rawUsage || typeof rawUsage !== "object" || Array.isArray(rawUsage)) continue;
136
134
  const usage = rawUsage as Record<string, unknown>;
@@ -156,6 +154,7 @@ export function ledgerUsageCalls(
156
154
  output,
157
155
  cacheRead,
158
156
  cacheWrite,
157
+ ...(typeof usage.cacheWrite1h === "number" ? { cacheWrite1h: numberAt(usage, "cacheWrite1h") } : {}),
159
158
  reasoningTokens: reasoningTokensOf(usage),
160
159
  totalTokens,
161
160
  costUsd,
@@ -644,7 +644,7 @@ function withStagedExtensionPackage<T>(
644
644
  input: { id: string; files: ReadonlyArray<{ relativePath: string; buffer: Buffer }> },
645
645
  fn: (root: string) => T,
646
646
  ): T {
647
- const stagingParent = mkdtempSync(path.join(tmpdir(), "clio-share-extension-"));
647
+ const stagingParent = mkdtempSync(path.join(tmpdir(), "clio-coder-share-extension-"));
648
648
  const root = path.join(stagingParent, input.id);
649
649
  try {
650
650
  mkdirSync(root, { recursive: true });
@@ -2559,6 +2559,17 @@ export async function serveClioAcpAgent(options: ClioAcpServerOptions): Promise<
2559
2559
  }
2560
2560
  const text = promptText(params);
2561
2561
  if (text.length === 0) throw new AcpRequestError(-32602, "prompt text is required", { code: "invalid_params" });
2562
+ // Check the same credential authority as the runtime, without resolving or
2563
+ // echoing a secret. Desktop services do not inherit a terminal's API keys.
2564
+ const targetId = routingSnapshot().target;
2565
+ const target = targetId ? options.providers?.getTarget(targetId) : undefined;
2566
+ const runtime = target ? options.providers?.getRuntime(target.runtime) : undefined;
2567
+ if (target && runtime && options.providers && !options.providers.auth.statusForTarget(target, runtime).available) {
2568
+ throw new AcpRequestError(-32000, "credentials for the selected target are unavailable", {
2569
+ code: "prompt_not_admitted",
2570
+ reason: "authentication-required",
2571
+ });
2572
+ }
2562
2573
  if (options.session?.current()?.id !== session.id && options.session) options.session.resume(session.id);
2563
2574
  const active = createActivePromptState();
2564
2575
  session.activePrompt = active;
package/src/engine/ai.ts CHANGED
@@ -76,6 +76,7 @@ export interface EngineTextCompletionResult {
76
76
  output: number;
77
77
  cacheRead: number;
78
78
  cacheWrite: number;
79
+ cacheWrite1h?: number;
79
80
  reasoning: number;
80
81
  totalTokens: number;
81
82
  costUsd: number;
@@ -110,6 +111,7 @@ export async function completeEngineText(input: EngineTextCompletionInput): Prom
110
111
  output: response.usage.output,
111
112
  cacheRead: response.usage.cacheRead,
112
113
  cacheWrite: response.usage.cacheWrite,
114
+ ...(response.usage.cacheWrite1h === undefined ? {} : { cacheWrite1h: response.usage.cacheWrite1h }),
113
115
  reasoning: response.usage.reasoning ?? 0,
114
116
  totalTokens: response.usage.totalTokens,
115
117
  costUsd: response.usage.cost.total,
@@ -385,6 +385,46 @@ function stripThinkingFromContext(context: Context): Context {
385
385
  };
386
386
  }
387
387
 
388
+ /**
389
+ * Pi 0.85 drops assistant turns with neither text nor tools, even when it has
390
+ * serialized their raw reasoning field. Give only an interrupted, same-model
391
+ * raw-reasoning turn a request-local notice so a continuation retains its work.
392
+ * Never turn private reasoning into answer text or modify the saved transcript.
393
+ * Opaque signatures and cross-model conversion remain the provider's concern.
394
+ */
395
+ function preserveInterruptedReasoning(
396
+ context: Context,
397
+ model: Model<"openai-completions">,
398
+ resolved: ResolvedModelRuntimeCapabilities,
399
+ ): Context {
400
+ if (!resolved.thinking.thinkingActive || model.compat?.requiresThinkingAsText) return context;
401
+ return {
402
+ ...context,
403
+ messages: context.messages.map((message) => {
404
+ if (
405
+ message.role !== "assistant" ||
406
+ message.stopReason !== "length" ||
407
+ message.provider !== model.provider ||
408
+ message.api !== model.api ||
409
+ message.model !== model.id ||
410
+ message.content.length === 0 ||
411
+ !message.content.every(
412
+ (block) =>
413
+ block.type === "thinking" &&
414
+ !block.redacted &&
415
+ block.thinking.trim().length > 0 &&
416
+ ["reasoning", "reasoning_content", "reasoning_text"].includes(block.thinkingSignature ?? ""),
417
+ )
418
+ )
419
+ return message;
420
+ return {
421
+ ...message,
422
+ content: [...message.content, { type: "text" as const, text: "Response interrupted before its answer." }],
423
+ };
424
+ }),
425
+ };
426
+ }
427
+
388
428
  function withStrippedPartial<TEvent extends AssistantMessageEvent>(event: TEvent): TEvent {
389
429
  if (!("partial" in event)) return event;
390
430
  return { ...event, partial: stripThinkingFromMessage(event.partial as AssistantMessage) };
@@ -506,11 +546,15 @@ function applyLmStudioPayload(
506
546
  return next;
507
547
  }
508
548
 
509
- function applyLlamaCppPromptCachePayload(payload: Record<string, unknown>, model: Model<Api>): Record<string, unknown> {
549
+ function applyLlamaCppPromptCachePayload(
550
+ payload: Record<string, unknown>,
551
+ model: Model<Api>,
552
+ retention: StreamOptions["cacheRetention"],
553
+ ): Record<string, unknown> {
510
554
  const metadata = runtimeMetadata(model);
511
555
  if (model.provider !== "llamacpp" || metadata?.runtimeId !== "llamacpp") return payload;
512
556
  if (payload.cache_prompt !== undefined) return payload;
513
- return { ...payload, cache_prompt: true };
557
+ return { ...payload, cache_prompt: retention !== "none" };
514
558
  }
515
559
 
516
560
  function shouldApplyLlamaCppPromptCache(model: Model<"openai-completions">): boolean {
@@ -522,13 +566,14 @@ function shouldApplyLlamaCppPromptCache(model: Model<"openai-completions">): boo
522
566
  function composeThinkingOnPayload(
523
567
  resolved: ResolvedModelRuntimeCapabilities,
524
568
  base: AnyOnPayload | undefined,
569
+ retention: StreamOptions["cacheRetention"],
525
570
  ): AnyOnPayload {
526
571
  return async (payload, model) => {
527
572
  if (!isPlainRecord(payload)) {
528
573
  return base ? await base(payload, model) : undefined;
529
574
  }
530
575
  const next = applyLmStudioPayload(
531
- applyThinkingPayload(applyLlamaCppPromptCachePayload(payload, model), resolved.thinking, resolved, model),
576
+ applyThinkingPayload(applyLlamaCppPromptCachePayload(payload, model, retention), resolved.thinking, resolved, model),
532
577
  model,
533
578
  resolved,
534
579
  );
@@ -585,7 +630,7 @@ function withSamplingOverrides<TOptions extends StreamOptions>(
585
630
  applied.mechanism === "on-off" ||
586
631
  applied.mechanism === "none"
587
632
  ) {
588
- merged.onPayload = composeThinkingOnPayload(resolved, options?.onPayload);
633
+ merged.onPayload = composeThinkingOnPayload(resolved, options?.onPayload, options?.cacheRetention);
589
634
  }
590
635
  return merged as TOptions;
591
636
  }
@@ -1041,7 +1086,12 @@ export const openAICompletionsApiProvider: EngineApiProvider<"openai-completions
1041
1086
  ...(options?.apiKey !== undefined ? { apiKey: options.apiKey } : {}),
1042
1087
  ...(options?.signal !== undefined ? { signal: options.signal } : {}),
1043
1088
  },
1044
- (requestModel) => piOpenAICompletions.stream(requestModel, effectiveContext, capturedOptions),
1089
+ (requestModel) =>
1090
+ piOpenAICompletions.stream(
1091
+ requestModel,
1092
+ preserveInterruptedReasoning(effectiveContext, requestModel, resolved),
1093
+ capturedOptions,
1094
+ ),
1045
1095
  ),
1046
1096
  ),
1047
1097
  ),
@@ -1078,7 +1128,12 @@ export const openAICompletionsApiProvider: EngineApiProvider<"openai-completions
1078
1128
  ...(options?.apiKey !== undefined ? { apiKey: options.apiKey } : {}),
1079
1129
  ...(options?.signal !== undefined ? { signal: options.signal } : {}),
1080
1130
  },
1081
- (requestModel) => piOpenAICompletions.streamSimple(requestModel, effectiveContext, capturedOptions),
1131
+ (requestModel) =>
1132
+ piOpenAICompletions.streamSimple(
1133
+ requestModel,
1134
+ preserveInterruptedReasoning(effectiveContext, requestModel, resolved),
1135
+ capturedOptions,
1136
+ ),
1082
1137
  ),
1083
1138
  ),
1084
1139
  ),
@@ -0,0 +1,21 @@
1
+ MIT License
2
+
3
+ Copyright (c) 2025 Mario Zechner
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy
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+ of this software and associated documentation files (the "Software"), to deal
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+ in the Software without restriction, including without limitation the rights
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+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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+ copies of the Software, and to permit persons to whom the Software is
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+ furnished to do so, subject to the following conditions:
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+
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+ The above copyright notice and this permission notice shall be included in all
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+ copies or substantial portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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+ SOFTWARE.