@iowarp/clio-coder 0.4.6 → 0.4.8

package/library/registry.yaml

@@ -0,0 +1,921 @@
+# Generated by pnpm library:pin. SHA-256 covers every package file.
+entries:
+  - kind: skill
+    name: archify
+    description: Validated interactive system maps and diagrams as standalone HTML
+      from a typed JSON spec, for one of five diagram types (architecture,
+      workflow, sequence, dataflow, lifecycle). Use when the user asks to
+      visualize architecture, a workflow, a call sequence, a data pipeline, or a
+      state machine, or to map this repository. Not for ad hoc drawings or slide
+      art, and not for Mermaid output; use the artifact tool for plain Markdown.
+    category: planning
+    audit: pass
+    triggers:
+      - architecture diagram
+      - system map
+      - map this repository
+      - sequence diagram
+      - data flow diagram
+      - state machine diagram
+      - visualize the architecture
+    version: 0.1.0
+    sourceUrl: skills/planning/archify
+    sha256: 9f4d748ab34bda2c7253f678f36ef0c48f049adfbe13e1a79280fd811c303929
+    provides:
+      - kind: skill
+        name: archify
+        description: "Validated interactive system maps and diagrams as standalone HTML
+          from a typed JSON spec, for one of five diagram types (architecture,
+          workflow, sequence, dataflow, lifecycle). Use when the user asks to
+          visualize architecture, a workflow, a call sequence, "
+  - kind: skill
+    name: architecture
+    description: "Decides the engineering approach for an intent in an interactive
+      session: investigates, proposes two or three genuinely different
+      approaches with trade-offs, recommends, lets the user decide, and writes
+      the decision doc. Not a task-by-task plan; use cut-it. Not a
+      multi-perspective debate; use design-council. Not product intent; use
+      product-intent. Not a typed implementation handoff; use tech-spec."
+    category: planning
+    audit: pass
+    triggers:
+      - how should we build this
+      - pick the stack
+      - architecture for this feature
+      - decide the engineering approach
+      - compare architecture options
+    version: 0.4.1
+    sourceUrl: skills/planning/architecture
+    sha256: 47ad4039ac2029e6190a43b09a3d137ee8017ee6948fa06b380b74a3472f2ee6
+    provides:
+      - kind: skill
+        name: architecture
+        description: "Decides the engineering approach for an intent in an interactive
+          session: investigates, proposes two or three genuinely different
+          approaches with trade-offs, recommends, lets the user decide, and
+          writes the decision doc. Not a task-by-task plan; use cut-it"
+  - kind: skill
+    name: arxiv-literature
+    description: Searches arXiv, summarizes or compares papers, and builds a compact
+      literature survey as citation-ready, source-linked paper cards. Prefer the
+      Researcher shadow agent for noisy multi-paper retrieval.
+    category: research
+    audit: pass
+    triggers:
+      - search arXiv
+      - summarize an arXiv paper
+      - compare these papers
+      - find recent research papers
+      - build a literature survey
+    version: 0.5.1
+    sourceUrl: skills/research/arxiv-literature
+    sha256: a4bfdeb4b84486dfddc2ba3f98f67a0028842d4093fcecc45bdb2a251eafc452
+    provides:
+      - kind: skill
+        name: arxiv-literature
+        description: Searches arXiv, summarizes or compares papers, and builds a compact
+          literature survey as citation-ready, source-linked paper cards. Prefer
+          the Researcher shadow agent for noisy multi-paper retrieval.
+  - kind: skill
+    name: ast-grep
+    description: "Structural code search with ast-grep rules: finds code by shape
+      when grep on text is too noisy, and never rewrites it. Not for plain
+      string or filename lookups; use grep or find."
+    category: coding
+    audit: pass
+    triggers:
+      - structural code search
+      - ast-grep rule
+      - find calls with this argument shape
+      - find code inside a function
+      - grep returns too much noise
+    version: 0.3.0
+    sourceUrl: skills/coding/ast-grep
+    sha256: a722fb6b5974f2863e623a20b8b61f3a7d5bae803da611526fc2eb2432417be6
+    provides:
+      - kind: skill
+        name: ast-grep
+        description: "Structural code search with ast-grep rules: finds code by shape
+          when grep on text is too noisy, and never rewrites it. Not for plain
+          string or filename lookups; use grep or find."
+  - kind: skill
+    name: backlog
+    description: Turns a finished PRD or architecture doc into a ticket backlog of
+      small stories with verifiable acceptance criteria, confirmed, then created
+      as GitHub issues or in another configured tracker. Not for local sprint
+      slicing into a SPRINT.md; use cut-it.
+    category: planning
+    audit: pass
+    triggers:
+      - create the stories
+      - turn this PRD into issues
+      - build the backlog
+      - decompose this plan into tickets
+      - create GitHub issues from this architecture
+    version: 0.4.1
+    sourceUrl: skills/planning/backlog
+    sha256: 3b75a6ff84afe3a2900d35ed05c2dbb679ef3bdbbdc46a84d95da59e5ff448b5
+    provides:
+      - kind: skill
+        name: backlog
+        description: Turns a finished PRD or architecture doc into a ticket backlog of
+          small stories with verifiable acceptance criteria, confirmed, then
+          created as GitHub issues or in another configured tracker. Not for
+          local sprint slicing into a SPRINT.md; use cut-it.
+  - kind: skill
+    name: branch-closeout
+    description: Proves merged work on the canonical base, inspects and removes
+      associated worktrees through Git, deletes local branches safely, and
+      audits surviving repository refs. Not for creating worktrees; use
+      worktree-create. Not for integrating branches; use worktree-merge.
+    category: git
+    audit: pass
+    triggers:
+      - close out this branch
+      - clean up merged branch
+      - remove merged worktree
+      - closeout branch
+      - branch-closeout
+    version: 0.1.0
+    sourceUrl: skills/git/branch-closeout
+    sha256: 374f181d586e9cad92caa0e8a4387dee7e6b299a07e1613274b9e76546f15f1e
+    provides:
+      - kind: skill
+        name: branch-closeout
+        description: Proves merged work on the canonical base, inspects and removes
+          associated worktrees through Git, deletes local branches safely, and
+          audits surviving repository refs. Not for creating worktrees; use
+          worktree-create. Not for integrating branches; use worktre
+  - kind: skill
+    name: clio-coder-dev
+    description: "Governs changes to Clio Coder's own source and harness (TUI,
+      skills, agents, tools, prompts, domains): what may change freely, what
+      needs explicit user intent, and how to change it without breaking the
+      architecture. Not for verifying a change against the harness; use
+      clio-coder-test."
+    category: meta
+    audit: pass
+    triggers:
+      - modify Clio Coder
+      - change the Clio harness
+      - edit Clio skills or agents
+      - evolve Clio tools or prompts
+      - Clio contribution boundary
+    version: 0.4.0
+    sourceUrl: skills/meta/clio-coder-dev
+    sha256: d72e2dcd441600f927738d352766a7472e2340bb60b1a23b6894f921079e4243
+    provides:
+      - kind: skill
+        name: clio-coder-dev
+        description: "Governs changes to Clio Coder's own source and harness (TUI,
+          skills, agents, tools, prompts, domains): what may change freely, what
+          needs explicit user intent, and how to change it without breaking the
+          architecture. Not for verifying a change against the h"
+  - kind: skill
+    name: clio-coder-test
+    description: Verifies a Clio Coder source change against the current contract,
+      smoke, boundary, and application test lanes, including temporary-state and
+      local-provider harnesses. Not for deciding what may change; use
+      clio-coder-dev.
+    category: meta
+    audit: pass
+    triggers:
+      - test Clio Coder
+      - verify a Clio source change
+      - run Clio contract tests
+      - test ACP over stdio
+      - Clio mock provider harness
+    version: 0.3.1
+    sourceUrl: skills/meta/clio-coder-test
+    sha256: fc8b0f3f7748070456bcf5366a0cf0bb41bf1737549592d3064b7b81cc9b0512
+    provides:
+      - kind: skill
+        name: clio-coder-test
+        description: Verifies a Clio Coder source change against the current contract,
+          smoke, boundary, and application test lanes, including temporary-state
+          and local-provider harnesses. Not for deciding what may change; use
+          clio-coder-dev.
+  - kind: skill
+    name: coding-standards
+    description: Correct-by-construction TypeScript rules (errors as values, parse
+      don't validate, illegal states unrepresentable, deep modules) for writing
+      or refactoring TypeScript when the project has not pinned its own
+      standards.
+    category: coding
+    audit: pass
+    triggers:
+      - TypeScript coding standards
+      - errors as values
+      - parse don't validate
+      - illegal states unrepresentable
+      - functional core imperative shell
+    version: 0.4.0
+    sourceUrl: skills/coding/coding-standards
+    sha256: acc6fba9b167f5aed949bbe35924d7f4be45afec69941561642e585b76236c68
+    provides:
+      - kind: skill
+        name: coding-standards
+        description: Correct-by-construction TypeScript rules (errors as values, parse
+          don't validate, illegal states unrepresentable, deep modules) for
+          writing or refactoring TypeScript when the project has not pinned its
+          own standards.
+  - kind: skill
+    name: context-handoff
+    description: Writes a durable, redacted, reference-not-copy handoff document
+      when a session winds down or context is about to be compacted or lost, so
+      the next session or agent can continue. Not for orienting at the start of
+      a session; use context-prime.
+    category: context
+    audit: pass
+    triggers:
+      - session handoff
+      - notes for the next session
+      - handoff to another agent
+      - context is about to be lost
+      - write a continuation brief
+    version: 0.5.1
+    sourceUrl: skills/context/context-handoff
+    sha256: f5d32418c95dcc9766b5564b00e9d27de6c86662b742666792f1ef984921ad24
+    provides:
+      - kind: skill
+        name: context-handoff
+        description: Writes a durable, redacted, reference-not-copy handoff document
+          when a session winds down or context is about to be compacted or lost,
+          so the next session or agent can continue. Not for orienting at the
+          start of a session; use context-prime.
+  - kind: skill
+    name: context-prime
+    description: Orients a fresh session in a repository by loading the last
+      handoff, git state, the project constitution, and active-work signals
+      before acting. Not for writing the handoff; use context-handoff.
+    category: context
+    audit: pass
+    triggers:
+      - prime this repository
+      - catch me up
+      - where were we
+      - get up to speed
+      - resume repository work after a break
+    version: 0.4.1
+    sourceUrl: skills/context/context-prime
+    sha256: a8f36ad128279eaccbd8d8dddfcbc25319367af61fc2e1e415d80229dc761b78
+    provides:
+      - kind: skill
+        name: context-prime
+        description: Orients a fresh session in a repository by loading the last
+          handoff, git state, the project constitution, and active-work signals
+          before acting. Not for writing the handoff; use context-handoff.
+  - kind: skill
+    name: credentials
+    description: Handles API keys, tokens, and facility credentials (kerberos
+      tickets, globus and scheduler tokens, ssh agents, netrc) before a tool
+      needs one, after an auth error, when a new secret is supplied, or when one
+      may have leaked. Not for provider target configuration; use clio-coder
+      auth and target settings.
+    category: meta
+    audit: pass
+    triggers:
+      - API key
+      - credential missing
+      - authentication error
+      - permission denied
+      - add a secret
+      - secret leaked
+    version: 0.2.0
+    sourceUrl: skills/meta/credentials
+    sha256: ff99f5be5773b767cc384772caf9b87d57a8ffd884e1acc002e60b0ebf185953
+    provides:
+      - kind: skill
+        name: credentials
+        description: Handles API keys, tokens, and facility credentials (kerberos
+          tickets, globus and scheduler tokens, ssh agents, netrc) before a tool
+          needs one, after an auth error, when a new secret is supplied, or when
+          one may have leaked. Not for provider target configur
+  - kind: skill
+    name: cut-it
+    description: Slices an existing plan, PRD, or milestone into an executable
+      sprint of dependency-ordered vertical slices sized for one agent run each,
+      with done-when verification per slice; never fabricates a plan. Not for
+      deciding the approach; use architecture.
+    category: workflow
+    audit: pass
+    triggers:
+      - cut it
+      - slice this plan
+      - make this plan executable
+      - turn this milestone into a sprint
+      - write dependency-ordered vertical slices
+    version: 0.4.1
+    sourceUrl: skills/workflow/cut-it
+    sha256: 0d096a8d2125216a57494918c652e823baa6b4957090727146a8fcbe43ecda41
+    provides:
+      - kind: skill
+        name: cut-it
+        description: Slices an existing plan, PRD, or milestone into an executable
+          sprint of dependency-ordered vertical slices sized for one agent run
+          each, with done-when verification per slice; never fabricates a plan.
+          Not for deciding the approach; use architecture.
+  - kind: skill
+    name: design-council
+    description: Convenes several expert perspectives that challenge each other on a
+      design decision with real trade-offs before code is written; quick mode
+      runs a single round. Not for a one-question-at-a-time interrogation of a
+      plan; use grill-me. Not for splitting implementation across workers; use
+      dispatch directly.
+    category: workflow
+    audit: pass
+    triggers:
+      - convene a design council
+      - debate this design
+      - get multiple expert perspectives
+      - weigh the architecture options
+      - what would experts say
+    version: 0.6.0
+    sourceUrl: skills/workflow/design-council
+    sha256: 9dce47b705e4df1cc8992522d7a1597b50e8d221a7357161ef8a3cffab018216
+    provides:
+      - kind: skill
+        name: design-council
+        description: Convenes several expert perspectives that challenge each other on a
+          design decision with real trade-offs before code is written; quick
+          mode runs a single round. Not for a one-question-at-a-time
+          interrogation of a plan; use grill-me. Not for splitting imple
+  - kind: skill
+    name: experiment-protocol
+    description: "Pre-registers a performance study, numerical comparison, parameter
+      sweep, or benchmark: thresholds, tolerances, environment pins, and verdict
+      conditions locked into the validation contract before any measurement. Not
+      for diagnosing a stalled bug; use scientific-debugging."
+    category: research
+    audit: pass
+    triggers:
+      - benchmark these implementations
+      - pre-register a performance experiment
+      - run a parameter sweep
+      - define numerical tolerances
+      - reproduce these results
+      - compare solver accuracy
+    version: 0.3.1
+    sourceUrl: skills/research/experiment-protocol
+    sha256: aa3f692a48ef8a4a7e027cc98bc63a0bc629f2f24546f8bf2e4edaeebde15b52
+    provides:
+      - kind: skill
+        name: experiment-protocol
+        description: "Pre-registers a performance study, numerical comparison, parameter
+          sweep, or benchmark: thresholds, tolerances, environment pins, and
+          verdict conditions locked into the validation contract before any
+          measurement. Not for diagnosing a stalled bug; use scien"
+  - kind: skill
+    name: file-ticket
+    description: "Turns something noticed mid-session into a tracker issue: captures
+      evidence, dedups against existing issues, composes a labeled issue with
+      acceptance criteria, confirms, and creates it via gh. Not for batch ticket
+      creation from a PRD; use backlog. Not for diagnosing an existing issue;
+      use fix-issue."
+    category: git
+    audit: pass
+    triggers:
+      - file a ticket
+      - open an issue for this
+      - log this bug
+      - ticket this behavior
+      - create a tracker issue
+    version: 0.3.0
+    sourceUrl: skills/git/file-ticket
+    sha256: b7a86e89817323e28aea0432a93f8457da18b1fc372c2e886278669c968a77d6
+    provides:
+      - kind: skill
+        name: file-ticket
+        description: "Turns something noticed mid-session into a tracker issue: captures
+          evidence, dedups against existing issues, composes a labeled issue
+          with acceptance criteria, confirms, and creates it via gh. Not for
+          batch ticket creation from a PRD; use backlog. Not for "
+  - kind: skill
+    name: find-skills
+    description: Finds published skills and prepares their Library installation for
+      the operator when the user asks whether a capability exists as a skill.
+      Not for authoring a new skill; use skill-craft.
+    category: meta
+    audit: pass
+    triggers:
+      - find a skill
+      - is there a skill for this
+      - install a skill
+      - add an agent skill
+      - search the skills marketplace
+    version: 0.2.1
+    sourceUrl: skills/meta/find-skills
+    sha256: e04b432bbdac8bfc5d47b4e089ab74e07cc01789b848d3c0227f0b0147cf015c
+    provides:
+      - kind: skill
+        name: find-skills
+        description: Finds published skills and prepares their Library installation for
+          the operator when the user asks whether a capability exists as a
+          skill. Not for authoring a new skill; use skill-craft.
+  - kind: skill
+    name: fix-issue
+    description: "Resolves a tracker issue end to end: fetches it, diagnoses only
+      when the issue does not name the code, fixes test-first, and self-reviews
+      against the acceptance criteria, leaving a verified uncommitted change.
+      Not for filing; use file-ticket. Not for committing or PRs; use ship."
+    category: git
+    audit: pass
+    triggers:
+      - fix issue 123
+      - take this ticket
+      - resolve the bug in issue
+      - implement this tracker issue
+      - fix a GitHub issue end to end
+    version: 0.3.0
+    sourceUrl: skills/git/fix-issue
+    sha256: 1a2bae6bebcde3951e09d32d6abfc3bf85132da915b8e1c4295850fe9fc94b57
+    provides:
+      - kind: skill
+        name: fix-issue
+        description: "Resolves a tracker issue end to end: fetches it, diagnoses only
+          when the issue does not name the code, fixes test-first, and
+          self-reviews against the acceptance criteria, leaving a verified
+          uncommitted change. Not for filing; use file-ticket. Not for commi"
+  - kind: skill
+    name: grill-me
+    description: Stress-tests a plan, design, or idea through a phased
+      one-question-at-a-time interview before code is written, ending in a
+      compact decision log. Not for a multi-perspective debate; use
+      design-council.
+    category: workflow
+    audit: pass
+    triggers:
+      - grill me
+      - interview me about this plan
+      - stress-test this design
+      - poke holes in this idea
+      - clarify this plan one question at a time
+    version: 0.5.1
+    sourceUrl: skills/workflow/grill-me
+    sha256: 2ad71505b8f114ffc34385dce03d6327c8479033165f152b0c876b002b244a07
+    provides:
+      - kind: skill
+        name: grill-me
+        description: Stress-tests a plan, design, or idea through a phased
+          one-question-at-a-time interview before code is written, ending in a
+          compact decision log. Not for a multi-perspective debate; use
+          design-council.
+  - kind: skill
+    name: herdr
+    description: Launches, drives, or inspects another agent or command in a Herdr
+      pane, tab, or workspace, including a second Clio Coder instance; requires
+      HERDR_ENV=1. Not for background work a plain shell or dispatch already
+      covers.
+    category: meta
+    audit: pass
+    triggers:
+      - use Herdr
+      - launch an agent in a Herdr pane
+      - inspect a Herdr agent
+      - start a second Clio Coder instance
+      - drive a command in a Herdr workspace
+    version: 0.2.0
+    sourceUrl: skills/meta/herdr
+    sha256: 8d0d0337dbc716074b070453e0feae1420faa344283e3044101e43acfd1d08b5
+    provides:
+      - kind: skill
+        name: herdr
+        description: Launches, drives, or inspects another agent or command in a Herdr
+          pane, tab, or workspace, including a second Clio Coder instance;
+          requires HERDR_ENV=1. Not for background work a plain shell or
+          dispatch already covers.
+  - kind: plugin
+    name: materio
+    description: "Materio: materials research interviews, supplied-corpus synthesis,
+      lab feasibility, task execution and verified paper handoff."
+    version: 0.1.0
+    sourceUrl: plugins/materio
+    sha256: dfc6cb2fbd8f52245e80e79de51c1c5207c3fcc474001b503590231d2f811105
+    provides:
+      - kind: agent
+        name: materio-lab-definer
+        description: Structure resource interviews into a feasibility map with gaps and
+          alternatives.
+      - kind: agent
+        name: materio-literature-reviewer
+        description: Review supplied materials and provided URLs with citation
+          provenance and explicit gaps.
+      - kind: agent
+        name: materio-research-explorer
+        description: Synthesize candidate materials-science questions and write
+          researcher-confirmed identity.
+      - kind: agent
+        name: materio-task-executor
+        description: Produce type-specific artifacts for one approved materials-science
+          task and verify the files.
+      - kind: agent
+        name: materio-task-verifier
+        description: Independently read task artifacts and validate completeness,
+          assumptions, and supported claims.
+      - kind: agent
+        name: materio-workflow-planner
+        description: Build a resource-aware dependency plan with researcher assumptions
+          and tagged defaults.
+      - kind: fleet
+        name: materio-execute-task
+        description: Execute one pre-approved research task and independently inspect
+          its output files.
+      - kind: prompt
+        name: materio:add-task
+        description: Add a new task to the research workflow
+      - kind: prompt
+        name: materio:archive-task
+        description: Archive a task; moves it to the Archived section of WORKFLOW.md,
+          out of active execution
+      - kind: prompt
+        name: materio:checkpoint
+        description: Save, inspect, or restore a validated research checkpoint archive.
+      - kind: prompt
+        name: materio:define-research-tasks
+        description: Build a research workflow; select from traditional templates or
+          create from scratch, with assumption interviews per task
+      - kind: prompt
+        name: materio:define-virtual-lab
+        description: Interview to map all available lab resources; equipment, HPC,
+          software, collaborations; into a VIRTUAL-LAB.md that guides feasible
+          task planning
+      - kind: prompt
+        name: materio:execute-task
+        description: Execute a specific research task or the entire workflow
+      - kind: prompt
+        name: materio:help
+        description: Overview of Materio commands, workflow, and philosophy
+      - kind: prompt
+        name: materio:identify-research
+        description: Start exploring a research subject; guided interview to select
+          fields, define scope, and generate a research prompt
+      - kind: prompt
+        name: materio:literature-review
+        description: Conduct literature review, identify research gaps, and define
+          search keywords
+      - kind: prompt
+        name: materio:pause-research
+        description: Save the current research position and pause active work.
+      - kind: prompt
+        name: materio:progress
+        description: Show research progress with statusline, recent work, and smart
+          routing to next action
+      - kind: prompt
+        name: materio:remove-task
+        description: Remove a task from the research workflow permanently
+      - kind: prompt
+        name: materio:resume-research
+        description: Resume research from a paused state; shows current position and
+          suggests next action
+      - kind: prompt
+        name: materio:settings
+        description: Inspect or update research network, checkpoint, and commit settings.
+      - kind: prompt
+        name: materio:status
+        description: Show full research project dashboard; identity, workflow progress,
+          data, and next action
+      - kind: prompt
+        name: materio:upload-data
+        description: Register and index data files, papers, or datasets for use in
+          research tasks
+      - kind: prompt
+        name: materio:wtfp
+        description: Prepare a reviewed research-to-paper handoff for the wtf-p workflow.
+      - kind: skill
+        name: materio-lab-definer
+        description: Structure resource interviews into a feasibility map with gaps and
+          alternatives.
+      - kind: skill
+        name: materio-literature-reviewer
+        description: Review supplied materials and provided URLs with citation
+          provenance and explicit gaps.
+      - kind: skill
+        name: materio-research-explorer
+        description: Synthesize candidate materials-science questions and write
+          researcher-confirmed identity.
+      - kind: skill
+        name: materio-task-executor
+        description: Produce type-specific artifacts for one approved materials-science
+          task and verify the files.
+      - kind: skill
+        name: materio-task-verifier
+        description: Independently inspect research task outputs against their approved
+          assumptions, artifacts, and evidence.
+      - kind: skill
+        name: materio-workflow-planner
+        description: Build a resource-aware dependency plan with researcher assumptions
+          and tagged defaults.
+  - kind: skill
+    name: prd
+    description: Turns an idea into a product requirements document through a
+      phase-gated interview, ending in PRD.md plus per-milestone prompt files
+      ready to drive a coding agent. Not for the problem-first product thesis;
+      use product-intent.
+    category: planning
+    audit: pass
+    triggers:
+      - write a PRD
+      - spec this product out
+      - define this feature
+      - structure this product brain dump
+      - create milestone prompts
+    version: 0.4.1
+    sourceUrl: skills/planning/prd
+    sha256: 1e20b78445516f9f5386ce697cf25cf0ef1402038deffff038e37e751ef77eee
+    provides:
+      - kind: skill
+        name: prd
+        description: Turns an idea into a product requirements document through a
+          phase-gated interview, ending in PRD.md plus per-milestone prompt
+          files ready to drive a coding agent. Not for the problem-first product
+          thesis; use product-intent.
+  - kind: skill
+    name: product-intent
+    description: "Writes a problem-first product document for a greenfield effort:
+      interviews for the problem, evidence, and a falsifiable hypothesis, with
+      zero engineering decisions. Not for engineering decisions; use
+      architecture. Not for turning a locked idea into milestone build prompts;
+      use prd."
+    category: planning
+    audit: pass
+    triggers:
+      - why are we building this
+      - write the product thesis
+      - problem-first PRD
+      - define a falsifiable product hypothesis
+      - greenfield product intent
+    version: 0.4.1
+    sourceUrl: skills/planning/product-intent
+    sha256: e1b6b18cf22697dfed8d177926f88913989450ce23c7f635a01fbdb25a19f8e2
+    provides:
+      - kind: skill
+        name: product-intent
+        description: "Writes a problem-first product document for a greenfield effort:
+          interviews for the problem, evidence, and a falsifiable hypothesis,
+          with zero engineering decisions. Not for engineering decisions; use
+          architecture. Not for turning a locked idea into milest"
+  - kind: skill
+    name: prototype
+    description: "Answers a design question with throwaway code: a clearly marked,
+      runnable, no-persistence prototype whose verdict is kept and whose code is
+      discarded. Not for pre-registered performance experiments; use
+      experiment-protocol. Not for production implementation."
+    category: coding
+    audit: pass
+    triggers:
+      - throwaway prototype
+      - mock up this UI
+      - prototype this state model
+      - sanity-check this logic
+      - what should this UI look like
+    version: 0.4.0
+    sourceUrl: skills/coding/prototype
+    sha256: c05a4f272858095842ceaed952649969ec08fd00e953a2c6998ef93b57ed17ad
+    provides:
+      - kind: skill
+        name: prototype
+        description: "Answers a design question with throwaway code: a clearly marked,
+          runnable, no-persistence prototype whose verdict is kept and whose
+          code is discarded. Not for pre-registered performance experiments; use
+          experiment-protocol. Not for production implementatio"
+  - kind: skill
+    name: resolve-merge-conflicts
+    description: Resolves a merge, rebase, or cherry-pick stopped on conflicts by
+      reconstructing both sides' intent, validating with the project's own
+      checks, and completing the operation. Not for integrating many branches;
+      use worktree-merge.
+    category: git
+    audit: pass
+    triggers:
+      - merge conflict
+      - fix these conflicts
+      - finish the merge
+      - finish the rebase
+      - resolve conflict markers
+    version: 0.4.0
+    sourceUrl: skills/git/resolve-merge-conflicts
+    sha256: c1c0999db9e664ecab27d16760c5fe883f468e0c8ba6df9ed97fc28ac01f1414
+    provides:
+      - kind: skill
+        name: resolve-merge-conflicts
+        description: Resolves a merge, rebase, or cherry-pick stopped on conflicts by
+          reconstructing both sides' intent, validating with the project's own
+          checks, and completing the operation. Not for integrating many
+          branches; use worktree-merge.
+  - kind: skill
+    name: scientific-debugging
+    description: Diagnoses stalled or cross-system failures and wrong, NaN,
+      nondeterministic, or unexpectedly slow scientific results through
+      falsifiable hypotheses across distinct fault classes, with evidence-cited
+      verdicts before any fix. Not for designing benchmarks or pre-registered
+      experiments; use experiment-protocol.
+    category: research
+    audit: pass
+    triggers:
+      - wrong scientific results
+      - nondeterministic HPC code
+      - unexplained performance regression
+      - diagnose NaNs
+      - debug with falsifiable hypotheses
+      - scientific root cause
+    version: 0.3.1
+    sourceUrl: skills/research/scientific-debugging
+    sha256: fc77eed8b58a1c3e02920c2d591b0ee4c6139d5a9a4f1f4331b015bed0e26c6c
+    provides:
+      - kind: skill
+        name: scientific-debugging
+        description: "Diagnoses stalled or cross-system failures and wrong, NaN,
+          nondeterministic, or unexpectedly slow scientific results through
+          falsifiable hypotheses across distinct fault classes, with
+          evidence-cited verdicts before any fix. Not for designing benchmarks
+          or "
+  - kind: skill
+    name: scientific-modernization
+    description: Modernizes, ports, rewrites, packages, or replaces established
+      scientific software in independently validated stages against an external
+      scientific oracle, settling compatibility and upstream stewardship before
+      calling it complete. Not for an isolated benchmark; use
+      experiment-protocol. Not for diagnosing wrong results; use
+      scientific-debugging.
+    category: research
+    audit: pass
+    triggers:
+      - modernize this scientific code
+      - rewrite this scientific software in Rust
+      - port this solver to GPU
+      - migrate the scientific build system
+      - create a maintained fork
+      - preserve scientific parity
+    version: 0.4.1
+    sourceUrl: skills/research/scientific-modernization
+    sha256: 9b6e995b76aadff8c509995fd3e21291b4c62d476a4d6c3bb017ca44820facc6
+    provides:
+      - kind: skill
+        name: scientific-modernization
+        description: Modernizes, ports, rewrites, packages, or replaces established
+          scientific software in independently validated stages against an
+          external scientific oracle, settling compatibility and upstream
+          stewardship before calling it complete. Not for an isolated benc
+  - kind: skill
+    name: ship
+    description: "Ships finished work: writes one reviewed atomic commit, keeps
+      maintainer branches local, or pushes a contributor branch to their fork
+      and opens a PR only on explicit intent. Not for producing the change; use
+      fix-issue."
+    category: git
+    audit: pass
+    triggers:
+      - ship this
+      - commit this
+      - commit and open the PR
+      - push and open a pull request
+      - get this up for review
+    version: 0.5.0
+    sourceUrl: skills/git/ship
+    sha256: a70df2c1f3546262557372ece5733722f6eb737b85ec92902fcc0b5cf94cc123
+    provides:
+      - kind: skill
+        name: ship
+        description: "Ships finished work: writes one reviewed atomic commit, keeps
+          maintainer branches local, or pushes a contributor branch to their
+          fork and opens a PR only on explicit intent. Not for producing the
+          change; use fix-issue."
+  - kind: skill
+    name: skill-craft
+    description: Writes, reviews, or prunes a SKILL.md, judging whether its
+      description, body, and length earn their cost. Not for packaging a
+      workflow that just happened; use workflow-distiller.
+    category: meta
+    audit: pass
+    triggers:
+      - write a SKILL.md
+      - create a new skill
+      - improve this skill
+      - why isn't this skill firing
+      - prune a skill body
+    version: 0.3.1
+    sourceUrl: skills/meta/skill-craft
+    sha256: 03fe426b34c7cf39096cde9cdbb2c7770524aad39de3e3e968e7684fb08e2201
+    provides:
+      - kind: skill
+        name: skill-craft
+        description: Writes, reviews, or prunes a SKILL.md, judging whether its
+          description, body, and length earn their cost. Not for packaging a
+          workflow that just happened; use workflow-distiller.
+  - kind: skill
+    name: tdd
+    description: Builds a feature or fix test-first, red to green at pre-agreed
+      public seams, one vertical slice at a time. Not for designing benchmark
+      criteria; use experiment-protocol.
+    category: coding
+    audit: pass
+    triggers:
+      - test-driven development
+      - write the test first
+      - red green
+      - build this test-first
+      - reproduce the bug with a test
+    version: 0.4.0
+    sourceUrl: skills/coding/tdd
+    sha256: ddc1ba867bb277acb8056180370968a521243d90a850a56d3faa0c11103e402e
+    provides:
+      - kind: skill
+        name: tdd
+        description: Builds a feature or fix test-first, red to green at pre-agreed
+          public seams, one vertical slice at a time. Not for designing
+          benchmark criteria; use experiment-protocol.
+  - kind: skill
+    name: tech-spec
+    description: "Writes a typed call-stack architecture handoff: code-shaped
+      contracts plus execution flows, implementation-ready for another engineer.
+      User-invoked only. Not for weighing approaches or deciding the design; use
+      architecture first."
+    category: planning
+    audit: pass
+    triggers:
+      - write a tech spec
+      - typed call-stack handoff
+      - code-shaped contracts
+      - implementation-ready technical specification
+      - specify execution flows
+    version: 0.3.1
+    sourceUrl: skills/planning/tech-spec
+    sha256: 666b93ae62bcb1e5d9d2ffd2260ac442860eeafafa8dd63244dcffb65034eb41
+    provides:
+      - kind: skill
+        name: tech-spec
+        description: "Writes a typed call-stack architecture handoff: code-shaped
+          contracts plus execution flows, implementation-ready for another
+          engineer. User-invoked only. Not for weighing approaches or deciding
+          the design; use architecture first."
+  - kind: skill
+    name: workflow-distiller
+    description: "Packages a workflow that just happened into a reusable SKILL.md:
+      reconstructs it from the session record, checks overlap with installed
+      skills, gates on approval, then writes it following skill-craft. Not for
+      authoring a skill with no prior workflow; use skill-craft."
+    category: workflow
+    audit: pass
+    triggers:
+      - make this workflow a skill
+      - package what we just did
+      - turn this into a reusable workflow
+      - distill this repeated process
+      - create a skill from this session
+    version: 0.4.2
+    sourceUrl: skills/workflow/workflow-distiller
+    sha256: 5a58318ef207cf379aad6af3a057053c068bb960794025545e7db110740c9937
+    provides:
+      - kind: skill
+        name: workflow-distiller
+        description: "Packages a workflow that just happened into a reusable SKILL.md:
+          reconstructs it from the session record, checks overlap with installed
+          skills, gates on approval, then writes it following skill-craft. Not
+          for authoring a skill with no prior workflow; use s"
+  - kind: skill
+    name: worktree-create
+    description: Stands up one or more git worktrees for parallel work, each on its
+      own branch with gitignored config copied in, dependencies installed, and a
+      verified health check. Not for merging finished worktrees; use
+      worktree-merge. Not for closeout; use branch-closeout.
+    category: git
+    audit: pass
+    triggers:
+      - create a git worktree
+      - set up worktrees for these branches
+      - spin up parallel branches
+      - prepare parallel worktrees
+    version: 0.6.0
+    sourceUrl: skills/git/worktree-create
+    sha256: baa4c4aba06d4b0b95faf67882f24f8e162ddf0197945e2896fd3b6cd502f5f7
+    provides:
+      - kind: skill
+        name: worktree-create
+        description: Stands up one or more git worktrees for parallel work, each on its
+          own branch with gitignored config copied in, dependencies installed,
+          and a verified health check. Not for merging finished worktrees; use
+          worktree-merge. Not for closeout; use branch-closeo
+  - kind: skill
+    name: worktree-merge
+    description: Integrates finished worktree branches through one throwaway
+      integration branch, testing after each merge and running the full suite
+      before the main line moves, with exact rollback on failure. Not for
+      creating worktrees; use worktree-create. Not for closeout; use
+      branch-closeout.
+    category: git
+    audit: pass
+    triggers:
+      - merge my worktrees
+      - integrate these worktree branches
+      - combine parallel branches
+      - land finished worktrees
+    version: 0.6.0
+    sourceUrl: skills/git/worktree-merge
+    sha256: f62b643dc900d26d19b5ba4c4e5f2fc7f4669963d506a10234084dd99159936e
+    provides:
+      - kind: skill
+        name: worktree-merge
+        description: Integrates finished worktree branches through one throwaway
+          integration branch, testing after each merge and running the full
+          suite before the main line moves, with exact rollback on failure. Not
+          for creating worktrees; use worktree-create. Not for closeou