@iowarp/clio-coder 0.4.6 → 0.4.7

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (657) hide show
  1. package/.claude-plugin/marketplace.json +283 -0
  2. package/CHANGELOG.md +50 -0
  3. package/CONTRIBUTING.md +102 -29
  4. package/NOTICE +8 -0
  5. package/README.md +37 -5
  6. package/dist/{acp-UVEVWSDL.js → acp-W3Y3TRHD.js} +12 -12
  7. package/dist/{agents-VWY37DTK.js → agents-J4ICNLQ3.js} +52 -52
  8. package/dist/assets/codewiki.json +1 -1
  9. package/dist/assets/tui-notices/get-east-asian-width-LICENSE +9 -0
  10. package/dist/assets/tui-notices/marked-LICENSE +44 -0
  11. package/dist/assets/tui-notices/pi-tui-LICENSE +21 -0
  12. package/dist/{auth-PCV2XQDV.js → auth-X2UJUMOC.js} +24 -24
  13. package/dist/{builtins-PD652MTK.js → builtins-XLXWWSRF.js} +6 -6
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  109. package/dist/{chunk-PWWSIB2A.js → chunk-ZGIGW4ZG.js} +5 -5
  110. package/dist/cli/index.js +34 -36
  111. package/dist/{clio-QQCMTUZE.js → clio-L2P7S2R2.js} +9 -9
  112. package/dist/{code-nav-GUPM6766.js → code-nav-B5LNX4KU.js} +25 -25
  113. package/dist/{components-TNIKXCBH.js → components-63MMQKUT.js} +6 -6
  114. package/dist/{config-IIM7YOD3.js → config-YXARKGTX.js} +70 -67
  115. package/dist/{configure-4ZM5HWJX.js → configure-LMVQJ46J.js} +47 -35
  116. package/dist/{context-OL5P3HEP.js → context-7HJEWTTP.js} +87 -44
  117. package/dist/{context-44BZLJ3J.js → context-XSZKKFBW.js} +14 -14
  118. package/dist/{context-AIDVQKMW.js → context-YG2LZDYZ.js} +60 -58
  119. package/dist/{context-clear-OQV76MYP.js → context-clear-AC5NXHM2.js} +57 -55
  120. package/dist/{context-index-HP2JFUWA.js → context-index-KKTPRV5G.js} +3 -3
  121. package/dist/{context-map-INTXD54D.js → context-map-T7ROR5D5.js} +4 -4
  122. package/dist/{context-working-set-ZUW3EGLS.js → context-working-set-F4Q4J3NS.js} +12 -10
  123. package/dist/{detail-UXPWRANG.js → detail-H73BEF2N.js} +58 -56
  124. package/dist/{dispatch-runner-P3ZW6G77.js → dispatch-runner-3RY5FSJC.js} +74 -72
  125. package/dist/{doctor-JJVGPZWT.js → doctor-EQYJOGUG.js} +44 -30
  126. package/dist/{eval-V2RTN3UH.js → eval-4P7O6CCE.js} +109 -46
  127. package/dist/{evidence-35PYWGSO.js → evidence-D6GUSYJW.js} +57 -55
  128. package/dist/{evidence-CIGGKI6J.js → evidence-O76QF7TZ.js} +62 -59
  129. package/dist/{evolve-33SM3NJP.js → evolve-H47BCETS.js} +58 -56
  130. package/dist/{extensions-YVRHX6ZI.js → extensions-NNL3ZOCU.js} +98 -20
  131. package/dist/{fleet-LFO7SIPC.js → fleet-KMNS6NOM.js} +106 -99
  132. package/dist/{fleet-commands-RLK72GU3.js → fleet-commands-DOWSYCBX.js} +14 -14
  133. package/dist/{fleet-decisions-3SBSCTCW.js → fleet-decisions-S3PTZV2D.js} +9 -9
  134. package/dist/{fleet-graph-JZIBCGMW.js → fleet-graph-F2DE2TME.js} +26 -24
  135. package/dist/{fleet-inspect-2L5YGGZJ.js → fleet-inspect-EN2Q6IVB.js} +60 -57
  136. package/dist/{fleet-preflight-QRSHIIDE.js → fleet-preflight-FRLETDD3.js} +3 -3
  137. package/dist/{fleet-validate-LIAVKDUU.js → fleet-validate-B2XDLS57.js} +28 -29
  138. package/dist/{fleet-verify-JIK3OQZR.js → fleet-verify-4JKUWGJ7.js} +57 -55
  139. package/dist/{fleet-view-IWHYGQKK.js → fleet-view-BHJFW26B.js} +60 -57
  140. package/dist/{init-NJEDOTQW.js → init-XAT5N5YM.js} +79 -74
  141. package/dist/interop-FVECHFKG.js +246 -0
  142. package/dist/{inventory-74UL7UHU.js → inventory-7KFQGLCV.js} +60 -57
  143. package/dist/library-NY2XOT75.js +492 -0
  144. package/dist/library-QAPAO23R.js +306 -0
  145. package/dist/library-import-5Y6MAS3R.js +183 -0
  146. package/dist/library-inventory-JT6HWITQ.js +56 -0
  147. package/dist/library-validation-EQUH25DC.js +42 -0
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  149. package/dist/{models-D4YDIQZQ.js → models-MASFJ6Y2.js} +48 -36
  150. package/dist/{monitor-NKVD55HX.js → monitor-YMP4NXJJ.js} +64 -61
  151. package/dist/{orchestrator-I6OATVPK.js → orchestrator-AFQRRTEI.js} +3685 -1841
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  159. package/dist/{share-NPZZMUXG.js → share-EZ6ERBMH.js} +31 -28
  160. package/dist/skills-BTVVNYVM.js +100 -0
  161. package/dist/{skills-eval-J5TCKSJA.js → skills-eval-UY34MNK7.js} +110 -72
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  180. package/dist/worker/entry.js +283 -76
  181. package/docs/README.md +43 -0
  182. package/docs/architecture/architecture.md +8 -7
  183. package/docs/architecture/artifact-versions.md +3 -3
  184. package/docs/architecture/context-engine.md +35 -1
  185. package/docs/architecture/library.md +32 -0
  186. package/docs/architecture/middleware-and-components.md +1 -1
  187. package/docs/architecture/model-catalog.md +21 -1
  188. package/docs/architecture/pi-boundary.md +18 -0
  189. package/docs/architecture/prompt-envelope-and-tools.md +5 -5
  190. package/docs/architecture/safety-model.md +21 -2
  191. package/docs/architecture/session-lifecycle.md +12 -1
  192. package/docs/architecture/tui-design.md +108 -9
  193. package/docs/architecture/worker-context.md +106 -0
  194. package/docs/guide/authoring-plugins.md +160 -0
  195. package/docs/guide/built-in-agents.md +5 -5
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  210. package/docs/guide/skills-marketplace.md +35 -72
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  220. package/evals/scalar-decision-machinery.ts +1 -1
  221. package/examples/extensions/README.md +67 -0
  222. package/examples/extensions/lab-status/clio-coder-extension.json +14 -0
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  225. package/examples/extensions/measurements/clio-coder-extension.json +28 -0
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  247. package/library/_authoring/templates/skill/plugin.json +23 -0
  248. package/library/agents/README.md +7 -0
  249. package/library/fleets/README.md +7 -0
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  251. package/library/plugins/materio/ai.iowarp.clio/agents/materio-lab-definer.md +208 -0
  252. package/library/plugins/materio/ai.iowarp.clio/agents/materio-literature-reviewer.md +308 -0
  253. package/library/plugins/materio/ai.iowarp.clio/agents/materio-research-explorer.md +249 -0
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  257. package/library/plugins/materio/ai.iowarp.clio/fleets/materio-execute-task.md +50 -0
  258. package/library/plugins/materio/ai.iowarp.clio/prompts/materio/add-task.md +66 -0
  259. package/library/plugins/materio/ai.iowarp.clio/prompts/materio/archive-task.md +65 -0
  260. package/library/plugins/materio/ai.iowarp.clio/prompts/materio/checkpoint.md +26 -0
  261. package/library/plugins/materio/ai.iowarp.clio/prompts/materio/define-research-tasks.md +230 -0
  262. package/library/plugins/materio/ai.iowarp.clio/prompts/materio/define-virtual-lab.md +181 -0
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  584. package/src/interactive/renderers/reference-card.ts +35 -0
  585. package/src/interactive/renderers/worker-entry.ts +35 -3
  586. package/src/interactive/slash-autocomplete.ts +99 -1
  587. package/src/interactive/slash-commands.ts +390 -67
  588. package/src/interactive/slash-spec.ts +0 -1
  589. package/src/interactive/terminal-lease.ts +44 -12
  590. package/src/interactive/turn-queues.ts +8 -7
  591. package/src/interactive/turn-runtime.ts +1 -1
  592. package/src/interactive/view/view-overlay.ts +19 -14
  593. package/src/interactive/welcome-dashboard.ts +525 -408
  594. package/src/tools/bootstrap.ts +8 -0
  595. package/src/tools/builtin-tool-catalog.ts +7 -2
  596. package/src/tools/context/index.ts +58 -5
  597. package/src/tools/context/library.ts +465 -0
  598. package/src/tools/context/surface.ts +20 -6
  599. package/src/tools/core-bootstrap.ts +3 -0
  600. package/src/tools/dispatch-admission.ts +24 -1
  601. package/src/tools/dispatch-arguments.ts +8 -0
  602. package/src/tools/dispatch-plan.ts +32 -0
  603. package/src/tools/dispatch-schema.ts +31 -1
  604. package/src/tools/dispatch-types.ts +3 -0
  605. package/src/tools/dispatch.ts +1 -1
  606. package/src/tools/harness-extensions.ts +169 -0
  607. package/src/tools/observation.ts +4 -0
  608. package/src/tools/policy.ts +7 -1
  609. package/src/tools/registry.ts +19 -1
  610. package/src/tools/worker-evidence.ts +5 -0
  611. package/src/worker/context-seed.ts +192 -0
  612. package/src/worker/entry.ts +1 -0
  613. package/src/worker/spec-contract.ts +8 -1
  614. package/dist/chunk-3UW3KU4A.js +0 -21
  615. package/dist/chunk-536HXRFE.js +0 -1257
  616. package/dist/chunk-B3MOMLJ4.js +0 -433
  617. package/dist/chunk-CXQ37WJH.js +0 -45
  618. package/dist/chunk-KTFSFCVN.js +0 -46
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  620. package/dist/chunk-QRFXEO6Y.js +0 -17
  621. package/dist/chunk-VAHLPXPY.js +0 -399
  622. package/dist/interop-RVCAYECG.js +0 -115
  623. package/dist/library-CTKZA7K3.js +0 -226
  624. package/dist/skills-OXFEAWMT.js +0 -510
  625. package/skills/README.md +0 -418
  626. package/skills/meta/find-skills/SKILL.md +0 -78
  627. package/skills/meta/find-skills/evals.md +0 -47
  628. package/src/domains/extensions/resource-path.ts +0 -27
  629. package/src/domains/lifecycle/migrations/2026-09-01-extension-install-digests.ts +0 -27
  630. package/src/interactive/overlays/agents.ts +0 -70
  631. package/src/interactive/overlays/library-install-confirm.ts +0 -152
  632. package/src/interactive/overlays/prompts.ts +0 -89
  633. package/src/interactive/overlays/skills-hub.ts +0 -615
  634. /package/{skills → library/skills}/coding/ast-grep/references/rule_reference.md +0 -0
  635. /package/{skills → library/skills}/coding/prototype/references/LOGIC.md +0 -0
  636. /package/{skills → library/skills}/coding/prototype/references/UI.md +0 -0
  637. /package/{skills → library/skills}/coding/tdd/references/mocking.md +0 -0
  638. /package/{skills → library/skills}/coding/tdd/references/tests.md +0 -0
  639. /package/{skills → library/skills}/context/context-handoff/scripts/new-handoff.sh +0 -0
  640. /package/{skills → library/skills}/git/branch-closeout/evals.md +0 -0
  641. /package/{skills → library/skills}/git/branch-closeout/references/closeout-checklist.md +0 -0
  642. /package/{skills → library/skills}/git/file-ticket/assets/issue-template.md +0 -0
  643. /package/{skills → library/skills}/git/file-ticket/evals.md +0 -0
  644. /package/{skills → library/skills}/git/file-ticket/references/issue-discovery.md +0 -0
  645. /package/{skills → library/skills}/git/fix-issue/evals.md +0 -0
  646. /package/{skills → library/skills}/git/fix-issue/references/diagnosis-and-rca.md +0 -0
  647. /package/{skills → library/skills}/git/resolve-merge-conflicts/references/conflict-matrix.md +0 -0
  648. /package/{skills → library/skills}/git/ship/assets/pr-template.md +0 -0
  649. /package/{skills → library/skills}/git/ship/evals.md +0 -0
  650. /package/{skills → library/skills}/git/ship/references/remote-and-branch-policy.md +0 -0
  651. /package/{skills → library/skills}/git/worktree-create/evals.md +0 -0
  652. /package/{skills → library/skills}/git/worktree-create/references/worktree-setup.md +0 -0
  653. /package/{skills → library/skills}/git/worktree-merge/evals.md +0 -0
  654. /package/{skills → library/skills}/git/worktree-merge/references/merge-strategies.md +0 -0
  655. /package/{skills → library/skills}/meta/clio-coder-test/references/harness.md +0 -0
  656. /package/{skills → library/skills}/meta/clio-coder-test/references/test-map.md +0 -0
  657. /package/{skills → library/skills}/planning/archify/evals.md +0 -0
@@ -11,7 +11,7 @@
11
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  "find code inside a function",
12
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  "grep returns too much noise"
13
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  ],
14
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/coding/ast-grep",
14
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/coding/ast-grep",
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  "version": "0.3.0",
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  "audit": "pass",
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  "category": "coding"
@@ -26,7 +26,7 @@
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  "illegal states unrepresentable",
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  "functional core imperative shell"
28
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  ],
29
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/coding/coding-standards",
29
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/coding/coding-standards",
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  "version": "0.4.0",
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  "audit": "pass",
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  "category": "coding"
@@ -41,7 +41,7 @@
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  "sanity-check this logic",
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  "what should this UI look like"
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  ],
44
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/coding/prototype",
44
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/coding/prototype",
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  "version": "0.4.0",
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  "audit": "pass",
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  "category": "coding"
@@ -56,7 +56,7 @@
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  "build this test-first",
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  "reproduce the bug with a test"
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  ],
59
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/coding/tdd",
59
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/coding/tdd",
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  "version": "0.4.0",
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  "audit": "pass",
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  "category": "coding"
@@ -71,7 +71,7 @@
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  "context is about to be lost",
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  "write a continuation brief"
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  ],
74
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/context/context-handoff",
74
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/context/context-handoff",
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  "version": "0.5.1",
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  "audit": "pass",
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  "category": "context"
@@ -86,7 +86,7 @@
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  "get up to speed",
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  "resume repository work after a break"
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  ],
89
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/context/context-prime",
89
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/context/context-prime",
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  "version": "0.4.1",
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  "audit": "pass",
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  "category": "context"
@@ -101,7 +101,7 @@
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  "closeout branch",
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  "branch-closeout"
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  ],
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- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/git/branch-closeout",
104
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/git/branch-closeout",
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  "version": "0.1.0",
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  "audit": "pass",
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  "category": "git"
@@ -116,7 +116,7 @@
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  "ticket this behavior",
117
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  "create a tracker issue"
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  ],
119
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/git/file-ticket",
119
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/git/file-ticket",
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  "version": "0.3.0",
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  "audit": "pass",
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  "category": "git"
@@ -131,7 +131,7 @@
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  "implement this tracker issue",
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  "fix a GitHub issue end to end"
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  ],
134
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/git/fix-issue",
134
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/git/fix-issue",
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  "version": "0.3.0",
136
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  "audit": "pass",
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  "category": "git"
@@ -146,7 +146,7 @@
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  "finish the rebase",
147
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  "resolve conflict markers"
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  ],
149
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/git/resolve-merge-conflicts",
149
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/git/resolve-merge-conflicts",
150
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  "version": "0.4.0",
151
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  "audit": "pass",
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  "category": "git"
@@ -161,7 +161,7 @@
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  "push and open a pull request",
162
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  "get this up for review"
163
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  ],
164
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/git/ship",
164
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/git/ship",
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  "version": "0.5.0",
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  "audit": "pass",
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  "category": "git"
@@ -175,7 +175,7 @@
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  "spin up parallel branches",
176
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  "prepare parallel worktrees"
177
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  ],
178
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/git/worktree-create",
178
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/git/worktree-create",
179
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  "version": "0.6.0",
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  "audit": "pass",
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  "category": "git"
@@ -189,7 +189,7 @@
189
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  "combine parallel branches",
190
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  "land finished worktrees"
191
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  ],
192
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/git/worktree-merge",
192
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/git/worktree-merge",
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  "version": "0.6.0",
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  "audit": "pass",
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  "category": "git"
@@ -204,7 +204,7 @@
204
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  "evolve Clio tools or prompts",
205
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  "Clio contribution boundary"
206
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  ],
207
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/meta/clio-coder-dev",
207
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/meta/clio-coder-dev",
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  "version": "0.4.0",
209
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  "audit": "pass",
210
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  "category": "meta"
@@ -219,7 +219,7 @@
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  "test ACP over stdio",
220
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  "Clio mock provider harness"
221
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  ],
222
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/meta/clio-coder-test",
222
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/meta/clio-coder-test",
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  "version": "0.3.0",
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  "audit": "pass",
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  "category": "meta"
@@ -235,14 +235,14 @@
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  "add a secret",
236
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  "secret leaked"
237
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  ],
238
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/meta/credentials",
238
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/meta/credentials",
239
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  "version": "0.2.0",
240
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  "audit": "pass",
241
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  "category": "meta"
242
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  },
243
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  {
244
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  "name": "find-skills",
245
- "description": "Finds and installs published skills when the user asks whether a capability exists as a skill, searching with clio-coder skills search and installing only through clio-coder skills install. Not for authoring a new skill; use skill-craft.",
245
+ "description": "Finds published skills and prepares their Library installation for the operator when the user asks whether a capability exists as a skill. Not for authoring a new skill; use skill-craft.",
246
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  "triggers": [
247
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  "find a skill",
248
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  "is there a skill for this",
@@ -250,8 +250,8 @@
250
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  "add an agent skill",
251
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  "search the skills marketplace"
252
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  ],
253
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/meta/find-skills",
254
- "version": "0.2.0",
253
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/meta/find-skills",
254
+ "version": "0.2.1",
255
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  "audit": "pass",
256
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  "category": "meta"
257
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  },
@@ -265,7 +265,7 @@
265
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  "start a second Clio Coder instance",
266
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  "drive a command in a Herdr workspace"
267
267
  ],
268
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/meta/herdr",
268
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/meta/herdr",
269
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  "version": "0.2.0",
270
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  "audit": "pass",
271
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  "category": "meta"
@@ -280,8 +280,8 @@
280
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  "why isn't this skill firing",
281
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  "prune a skill body"
282
282
  ],
283
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/meta/skill-craft",
284
- "version": "0.3.0",
283
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/meta/skill-craft",
284
+ "version": "0.3.1",
285
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  "audit": "pass",
286
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  "category": "meta"
287
287
  },
@@ -302,7 +302,7 @@
302
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  "audit": "pass",
303
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  "category": "planning",
304
304
  "origin": "remote",
305
- "overlay": "skills/planning/archify",
305
+ "overlay": "library/skills/planning/archify",
306
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  "exclude": ["test", "package-lock.json"]
307
307
  },
308
308
  {
@@ -315,7 +315,7 @@
315
315
  "decide the engineering approach",
316
316
  "compare architecture options"
317
317
  ],
318
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/planning/architecture",
318
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/planning/architecture",
319
319
  "version": "0.4.1",
320
320
  "audit": "pass",
321
321
  "category": "planning"
@@ -330,7 +330,7 @@
330
330
  "decompose this plan into tickets",
331
331
  "create GitHub issues from this architecture"
332
332
  ],
333
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/planning/backlog",
333
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/planning/backlog",
334
334
  "version": "0.4.1",
335
335
  "audit": "pass",
336
336
  "category": "planning"
@@ -345,7 +345,7 @@
345
345
  "structure this product brain dump",
346
346
  "create milestone prompts"
347
347
  ],
348
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/planning/prd",
348
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/planning/prd",
349
349
  "version": "0.4.1",
350
350
  "audit": "pass",
351
351
  "category": "planning"
@@ -360,7 +360,7 @@
360
360
  "define a falsifiable product hypothesis",
361
361
  "greenfield product intent"
362
362
  ],
363
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/planning/product-intent",
363
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/planning/product-intent",
364
364
  "version": "0.4.1",
365
365
  "audit": "pass",
366
366
  "category": "planning"
@@ -375,7 +375,7 @@
375
375
  "implementation-ready technical specification",
376
376
  "specify execution flows"
377
377
  ],
378
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/planning/tech-spec",
378
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/planning/tech-spec",
379
379
  "version": "0.3.1",
380
380
  "audit": "pass",
381
381
  "category": "planning"
@@ -390,7 +390,7 @@
390
390
  "find recent research papers",
391
391
  "build a literature survey"
392
392
  ],
393
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/research/arxiv-literature",
393
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/research/arxiv-literature",
394
394
  "version": "0.5.1",
395
395
  "audit": "pass",
396
396
  "category": "research"
@@ -406,7 +406,7 @@
406
406
  "reproduce these results",
407
407
  "compare solver accuracy"
408
408
  ],
409
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/research/experiment-protocol",
409
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/research/experiment-protocol",
410
410
  "version": "0.3.1",
411
411
  "audit": "pass",
412
412
  "category": "research"
@@ -422,7 +422,7 @@
422
422
  "debug with falsifiable hypotheses",
423
423
  "scientific root cause"
424
424
  ],
425
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/research/scientific-debugging",
425
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/research/scientific-debugging",
426
426
  "version": "0.3.1",
427
427
  "audit": "pass",
428
428
  "category": "research"
@@ -438,7 +438,7 @@
438
438
  "create a maintained fork",
439
439
  "preserve scientific parity"
440
440
  ],
441
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/research/scientific-modernization",
441
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/research/scientific-modernization",
442
442
  "version": "0.4.1",
443
443
  "audit": "pass",
444
444
  "category": "research"
@@ -453,7 +453,7 @@
453
453
  "turn this milestone into a sprint",
454
454
  "write dependency-ordered vertical slices"
455
455
  ],
456
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/workflow/cut-it",
456
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/workflow/cut-it",
457
457
  "version": "0.4.1",
458
458
  "audit": "pass",
459
459
  "category": "workflow"
@@ -468,7 +468,7 @@
468
468
  "weigh the architecture options",
469
469
  "what would experts say"
470
470
  ],
471
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/workflow/design-council",
471
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/workflow/design-council",
472
472
  "version": "0.6.0",
473
473
  "audit": "pass",
474
474
  "category": "workflow"
@@ -483,7 +483,7 @@
483
483
  "poke holes in this idea",
484
484
  "clarify this plan one question at a time"
485
485
  ],
486
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/workflow/grill-me",
486
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/workflow/grill-me",
487
487
  "version": "0.5.1",
488
488
  "audit": "pass",
489
489
  "category": "workflow"
@@ -498,8 +498,8 @@
498
498
  "distill this repeated process",
499
499
  "create a skill from this session"
500
500
  ],
501
- "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/skills/workflow/workflow-distiller",
502
- "version": "0.4.1",
501
+ "sourceUrl": "https://github.com/iowarp/clio-coder/tree/main/library/skills/workflow/workflow-distiller",
502
+ "version": "0.4.2",
503
503
  "audit": "pass",
504
504
  "category": "workflow"
505
505
  }
@@ -21,7 +21,7 @@ allowed-tools:
21
21
  - ask_user
22
22
  clio-coder:
23
23
  registry-id: iowarp/clio-coder
24
- source-url: https://github.com/iowarp/clio-coder/tree/main/skills/workflow/cut-it
24
+ source-url: https://github.com/iowarp/clio-coder/tree/main/library/skills/workflow/cut-it
25
25
  audit: pass
26
26
  provenance: adapted
27
27
  origin: https://github.com/TheOrcDev/skills
@@ -38,7 +38,7 @@ Expected:
38
38
 
39
39
  ## Smoke record (2026-08-13)
40
40
 
41
- One representative scenario via `clio-coder skills eval` against Nemo-3.5-Lightning
41
+ One representative scenario via `clio-coder eval skill` against Nemo-3.5-Lightning
42
42
  (30B local, llamacpp on mini), full-auto sandbox. PASS. Sliced the seeded PLAN.md; judge 4/4.
43
43
 
44
44
  ## Battletest record (2026-09-03)
@@ -0,0 +1,23 @@
1
+ {
2
+ "$schema": "https://agent-plugins.org/schemas/1.0.0/plugin.schema.json",
3
+ "name": "cut-it",
4
+ "version": "0.4.1",
5
+ "description": "Slices an existing plan, PRD, or milestone into an executable sprint of dependency-ordered vertical slices sized for one agent run each, with done-when verification per slice; never fabricates a plan. Not for deciding the approach; use architecture.",
6
+ "license": "Apache-2.0",
7
+ "extensions": {
8
+ "ai.iowarp.clio": {
9
+ "manifestVersion": 1,
10
+ "kind": "skill",
11
+ "resources": {
12
+ "skills": "."
13
+ },
14
+ "components": [
15
+ {
16
+ "kind": "skill",
17
+ "id": "cut-it",
18
+ "path": "SKILL.md"
19
+ }
20
+ ]
21
+ }
22
+ }
23
+ }
@@ -20,7 +20,7 @@ allowed-tools:
20
20
  - ask_user
21
21
  clio-coder:
22
22
  registry-id: iowarp/clio-coder
23
- source-url: https://github.com/iowarp/clio-coder/tree/main/skills/workflow/design-council
23
+ source-url: https://github.com/iowarp/clio-coder/tree/main/library/skills/workflow/design-council
24
24
  audit: pass
25
25
  provenance: designed
26
26
  eval-status: smoke-checked
@@ -87,7 +87,7 @@ MPI checkpointing module writing one raw npy per rank per step).
87
87
 
88
88
  ## Smoke record (2026-08-13)
89
89
 
90
- One representative scenario via `clio-coder skills eval` against Nemo-3.5-Lightning
90
+ One representative scenario via `clio-coder eval skill` against Nemo-3.5-Lightning
91
91
  (30B local, llamacpp on mini), full-auto sandbox. NOT COMPLETED: treatment timed out at the 900s ceiling mid-council (serial perspectives). Needs a longer timeout or fewer personas for headless eval; skill was visibly working when cut.
92
92
 
93
93
  Follow-up (2026-08-13, v0.3.0): Step 1 now makes three perspectives the
@@ -0,0 +1,23 @@
1
+ {
2
+ "$schema": "https://agent-plugins.org/schemas/1.0.0/plugin.schema.json",
3
+ "name": "design-council",
4
+ "version": "0.6.0",
5
+ "description": "Convenes several expert perspectives that challenge each other on a design decision with real trade-offs before code is written; quick mode runs a single round. Not for a one-question-at-a-time interrogation of a plan; use grill-me. Not for splitting implementation across workers; use dispatch directly.",
6
+ "license": "Apache-2.0",
7
+ "extensions": {
8
+ "ai.iowarp.clio": {
9
+ "manifestVersion": 1,
10
+ "kind": "skill",
11
+ "resources": {
12
+ "skills": "."
13
+ },
14
+ "components": [
15
+ {
16
+ "kind": "skill",
17
+ "id": "design-council",
18
+ "path": "SKILL.md"
19
+ }
20
+ ]
21
+ }
22
+ }
23
+ }
@@ -20,7 +20,7 @@ allowed-tools:
20
20
  - ask_user
21
21
  clio-coder:
22
22
  registry-id: iowarp/clio-coder
23
- source-url: https://github.com/iowarp/clio-coder/tree/main/skills/workflow/grill-me
23
+ source-url: https://github.com/iowarp/clio-coder/tree/main/library/skills/workflow/grill-me
24
24
  audit: pass
25
25
  provenance: designed
26
26
  eval-status: smoke-checked
@@ -74,7 +74,7 @@ Expected:
74
74
 
75
75
  ## Smoke record (2026-08-13)
76
76
 
77
- One representative scenario via `clio-coder skills eval` against Nemo-3.5-Lightning
77
+ One representative scenario via `clio-coder eval skill` against Nemo-3.5-Lightning
78
78
  (30B local, llamacpp on mini), full-auto sandbox. PASS (smoke). Skill loaded and interviewed; judge emitted nothing (truncation).
79
79
 
80
80
  ## Battletest record (2026-09-03)
@@ -0,0 +1,23 @@
1
+ {
2
+ "$schema": "https://agent-plugins.org/schemas/1.0.0/plugin.schema.json",
3
+ "name": "grill-me",
4
+ "version": "0.5.1",
5
+ "description": "Stress-tests a plan, design, or idea through a phased one-question-at-a-time interview before code is written, ending in a compact decision log. Not for a multi-perspective debate; use design-council.",
6
+ "license": "Apache-2.0",
7
+ "extensions": {
8
+ "ai.iowarp.clio": {
9
+ "manifestVersion": 1,
10
+ "kind": "skill",
11
+ "resources": {
12
+ "skills": "."
13
+ },
14
+ "components": [
15
+ {
16
+ "kind": "skill",
17
+ "id": "grill-me",
18
+ "path": "SKILL.md"
19
+ }
20
+ ]
21
+ }
22
+ }
23
+ }
@@ -7,7 +7,7 @@ triggers:
7
7
  - turn this into a reusable workflow
8
8
  - distill this repeated process
9
9
  - create a skill from this session
10
- version: 0.4.1
10
+ version: 0.4.2
11
11
  license: Apache-2.0
12
12
  allowed-tools:
13
13
  - read
@@ -21,10 +21,10 @@ requires:
21
21
  - skill:skill-craft
22
22
  clio-coder:
23
23
  registry-id: iowarp/clio-coder
24
- source-url: https://github.com/iowarp/clio-coder/tree/main/skills/workflow/workflow-distiller
24
+ source-url: https://github.com/iowarp/clio-coder/tree/main/library/skills/workflow/workflow-distiller
25
25
  audit: pass
26
26
  provenance: designed
27
- eval-status: smoke-checked
27
+ eval-status: scenarios-recorded
28
28
  model-size: large
29
29
  ---
30
30
 
@@ -129,7 +129,8 @@ design.
129
129
 
130
130
  ## Phase 5 - Create
131
131
 
132
- Write `SKILL.md` under `.clio-coder/skills/<approved-name>/` with the
132
+ Write `SKILL.md` under `draft-skills/<approved-name>/`, outside protected active
133
+ skill and installed package roots, with the
133
134
  frontmatter contract below - a triggers-only third-person description, and
134
135
  the pruning pass - with `requires: [skill:<name>]` for every skill the
135
136
  overlap check referenced. Do not try to load skill-craft's own file mid-run
@@ -143,8 +144,10 @@ capitalized or spelled differently is rejected), and `requires` when Phase 3
143
144
  found a reference. If in doubt about the exact shape, `read` an already-
144
145
  installed skill's `SKILL.md` (this skill's own file is always available) and
145
146
  mirror its frontmatter keys rather than guessing or trying to load
146
- skill-craft. Scope defaults to project; use the user skill store only when
147
- the user said the workflow crosses repositories. Placeholders replace every
147
+ skill-craft. The proposed installation scope defaults to project; suggest user
148
+ scope only when the user said the workflow crosses repositories. Creation here
149
+ produces a draft. The operator later reviews a portable package envelope and
150
+ installs through the Library; never write into an active skill store directly. Placeholders replace every
148
151
  session-specific path, name, and value; distill the pattern, not the
149
152
  incident. Keep the generated skill under 120 lines; reference instead of
150
153
  inlining. If the session repeatedly dispatched the same worker pattern, also
@@ -154,11 +157,11 @@ offer a recipe sketch for the agents surface, but do not write recipe files.
154
157
 
155
158
  Record one RED-GREEN scenario agreed with the user: the prompt, and the
156
159
  observable behavior that distinguishes with-skill from without. `clio-coder
157
- skills validate` needs `bash`, which is outside this skill's tool surface -
160
+ library validate draft-skills/<approved-name>/SKILL.md` needs `bash`, which is outside this skill's tool surface -
158
161
  never attempt it; instead `read` the file back and confirm the frontmatter
159
162
  contract from Phase 5 by eye (required keys present, `allowed-tools` entries
160
163
  canonical lowercase, under the line budget), and say plainly that a real
161
- `clio-coder skills validate` pass is still owed once bash is available.
164
+ `clio-coder library validate` pass is still owed once bash is available.
162
165
  Otherwise record the scenario in the skill body's example section as the
163
166
  standing validation obligation. This skill has no `bash`/`git`, so it never
164
167
  commits or pushes the file it writes; say so and let the user commit it.
@@ -178,9 +181,9 @@ script, and verified row counts against the source, three sessions in a row.
178
181
  3. Overlap: the `context(scope="skills")` listing shows no fetch or CSV skill
179
182
  installed; no references.
180
183
  4. Gate: summary presented; user approves after tightening the description.
181
- 5. Create: write `.clio-coder/skills/csv-ingest/SKILL.md`, placeholders for the
184
+ 5. Create: write `draft-skills/csv-ingest/SKILL.md`, placeholders for the
182
185
  export URL and column map; frontmatter contract confirmed by reading the
183
- file back (no `bash`, so no `clio-coder skills validate` this turn).
186
+ file back (no `bash`, so no `clio-coder library validate` this turn).
184
187
  6. Validate: scenario "ingest this month's export" must show fetch,
185
188
  normalize, count-verify, spot-check in that order; recorded in the body.
186
189
 
@@ -196,6 +199,6 @@ script, and verified row counts against the source, three sessions in a row.
196
199
  - Session-specific paths or values surviving into the generated skill.
197
200
  - Batching interview questions or ignoring a stop signal.
198
201
  - Distilling a one-off without asking about recurrence.
199
- - Calling `bash` for `clio-coder skills validate`, or `context` with a
202
+ - Calling `bash` for `clio-coder library validate`, or `context` with a
200
203
  second skill's name to consult it mid-run: both are outside this skill's
201
204
  tool surface and refused.
@@ -23,8 +23,10 @@ Expected:
23
23
  - Lists installed skills via `context(scope="skills")` with no name before
24
24
  designing.
25
25
  - Presents a compact design summary and waits for explicit approval.
26
- - Writes the SKILL.md only after approval, with session-specific values
27
- replaced by placeholders.
26
+ - Writes `draft-skills/<name>/SKILL.md` only after approval, with
27
+ session-specific values replaced by placeholders.
28
+ - Keeps the draft outside protected active roots and identifies the operator
29
+ Library installation step; creation alone does not install or activate it.
28
30
  - Records a RED-GREEN validation scenario.
29
31
 
30
32
  ## S2 - overlap with an installed skill
@@ -68,6 +70,12 @@ Expected:
68
70
  - Session-specific paths, URLs, and values baked into the skill body.
69
71
  - Multi-question interviewing or an unbounded question stream.
70
72
 
73
+ ## Instruction correction (2026-09-10)
74
+
75
+ Version 0.4.2 moves draft creation outside protected active roots and corrects
76
+ the validator command. Historical observations below describe earlier versions.
77
+ The revised scenarios are recorded; no fresh model smoke run is claimed.
78
+
71
79
  ## Observed results
72
80
 
73
81
  Runs 2026-07-02, headless `clio-coder run --skill`. `ask_user` is not registered in
@@ -103,7 +111,7 @@ prompt; the phases still had to run in order.
103
111
 
104
112
  ## Smoke record (2026-08-13)
105
113
 
106
- One representative scenario via `clio-coder skills eval` against Nemo-3.5-Lightning
114
+ One representative scenario via `clio-coder eval skill` against Nemo-3.5-Lightning
107
115
  (30B local, llamacpp on mini), full-auto sandbox. PASS. Inline session-trace setup engaged; judge 5/6.
108
116
 
109
117
  ## Battletest record (2026-09-03)
@@ -131,7 +139,7 @@ surfaced in Phase 5/6: (1) "load skill-craft" is dead - `context(scope=
131
139
  "skills", name="skill-craft")` while workflow-distiller is itself the
132
140
  active pending skill is refused ("pending skill request(s)"); only one
133
141
  skill can be active at a time. (2) Phase 6's "confirm it loads with
134
- `clio-coder skills validate`" is dead - `bash` is outside this skill's
142
+ `clio-coder library validate`" is dead - `bash` is outside this skill's
135
143
  `allowed-tools`, so that command can never run. The model self-recovered
136
144
  both times (read its own installed SKILL.md as a frontmatter mirror; did a
137
145
  by-eye read-back instead of the blocked validate command) and reported the
@@ -175,7 +183,7 @@ I'll hold off writing until you approve" and, when a later `ask_user`
175
183
  round had already closed, correctly fell back to a plain-text approval
176
184
  request rather than stalling - explicitly restating, unprompted, every
177
185
  constraint this session's hardening pass had just added (no commit, no
178
- `clio-coder skills validate`, `tasks` out of surface). Phase 5 went
186
+ `clio-coder library validate`, `tasks` out of surface). Phase 5 went
179
187
  straight to `read`-ing its own installed SKILL.md to mirror the frontmatter
180
188
  contract, with zero attempt to load skill-craft - bug #1 confirmed fixed.
181
189
  The generated `.clio-coder/skills/add-signature-scanner/SKILL.md` (97
@@ -212,7 +220,7 @@ agree. Ran the full assumed-confirm monologue through Phase 2 and Phase 4
212
220
  (explicitly marked), wrote `.clio-coder/skills/signature-scanner/SKILL.md`
213
221
  (92 lines, valid frontmatter, canonical-lowercase tools, real placeholders,
214
222
  a concrete failure-behavior section, a validation scenario naming the still
215
- -owed real `clio-coder skills validate` pass). Zero safety blocks.
223
+ -owed real `clio-coder library validate` pass). Zero safety blocks.
216
224
 
217
225
  **Still weak**: the skill-craft mid-run-load and dead-`bash`-validate bugs
218
226
  are confirmed fixed by re-test, but only against this one fixture shape.
@@ -0,0 +1,23 @@
1
+ {
2
+ "$schema": "https://agent-plugins.org/schemas/1.0.0/plugin.schema.json",
3
+ "name": "workflow-distiller",
4
+ "version": "0.4.2",
5
+ "description": "Packages a workflow that just happened into a reusable SKILL.md: reconstructs it from the session record, checks overlap with installed skills, gates on approval, then writes it following skill-craft. Not for authoring a skill with no prior workflow; use skill-craft.",
6
+ "license": "Apache-2.0",
7
+ "extensions": {
8
+ "ai.iowarp.clio": {
9
+ "manifestVersion": 1,
10
+ "kind": "skill",
11
+ "resources": {
12
+ "skills": "."
13
+ },
14
+ "components": [
15
+ {
16
+ "kind": "skill",
17
+ "id": "workflow-distiller",
18
+ "path": "SKILL.md"
19
+ }
20
+ ]
21
+ }
22
+ }
23
+ }
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@iowarp/clio-coder",
3
- "version": "0.4.6",
3
+ "version": "0.4.7",
4
4
  "description": "The terminal coding agent for people who maintain the code that science runs on, with user-chosen models and inspectable evidence.",
5
5
  "keywords": [
6
6
  "ai",
@@ -43,14 +43,18 @@
43
43
  "clio-coder": "dist/cli/index.js"
44
44
  },
45
45
  "exports": {
46
- "./package.json": "./package.json"
46
+ "./package.json": "./package.json",
47
+ "./extensions": {
48
+ "types": "./src/domains/extensions/public-api.ts"
49
+ }
47
50
  },
48
51
  "files": [
49
52
  "dist",
50
53
  "!dist/**/*.map",
51
54
  "assets/clio-coder-logo-128.webp",
52
55
  "src/**",
53
- "skills/**",
56
+ "library/**",
57
+ ".claude-plugin/marketplace.json",
54
58
  "evals/**",
55
59
  "docs/**/*.md",
56
60
  "!docs/html/**",
@@ -61,7 +65,8 @@
61
65
  "CODE_OF_CONDUCT.md",
62
66
  "NOTICE",
63
67
  "LICENSE",
64
- "damage-control-rules.yaml"
68
+ "damage-control-rules.yaml",
69
+ "examples/extensions/**"
65
70
  ],
66
71
  "publishConfig": {
67
72
  "access": "public"
@@ -86,7 +91,9 @@
86
91
  "smoke:real-home": "bash scripts/smoke-real-home.sh",
87
92
  "prepublishOnly": "CLIO_CODER_RELEASE_CONTEXT=publish pnpm run ci:release",
88
93
  "skills:pin": "node --import tsx scripts/pin-skills.ts",
89
- "skills:check": "node --import tsx scripts/pin-skills.ts --check"
94
+ "skills:check": "node --import tsx scripts/pin-skills.ts --check",
95
+ "library:pin": "node --import tsx scripts/pin-library.ts",
96
+ "library:check": "node --import tsx scripts/pin-library.ts --check"
90
97
  },
91
98
  "optionalDependencies": {
92
99
  "@anthropic-ai/claude-agent-sdk": "0.3.186"