@iowarp/clio-coder 0.3.0 → 0.3.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (988) hide show
  1. package/CHANGELOG.md +33 -0
  2. package/README.md +50 -53
  3. package/dist/acp-FPR54DGL.js +138 -0
  4. package/dist/{agents-Q4MYPMUW.js → agents-OGPIHPJH.js} +33 -25
  5. package/dist/assets/codewiki.json +1 -0
  6. package/dist/assets/grammars/notices/@vscode__tree-sitter-wasm/LICENSE +21 -0
  7. package/dist/assets/grammars/notices/@vscode__tree-sitter-wasm/cgmanifest.json +16 -0
  8. package/dist/assets/grammars/notices/tree-sitter-wasms/LICENSE +24 -0
  9. package/dist/assets/grammars/tree-sitter-c-sharp.wasm +0 -0
  10. package/dist/assets/grammars/tree-sitter-c.wasm +0 -0
  11. package/dist/assets/grammars/tree-sitter-cpp.wasm +0 -0
  12. package/dist/assets/grammars/tree-sitter-go.wasm +0 -0
  13. package/dist/assets/grammars/tree-sitter-java.wasm +0 -0
  14. package/dist/assets/grammars/tree-sitter-javascript.wasm +0 -0
  15. package/dist/assets/grammars/tree-sitter-python.wasm +0 -0
  16. package/dist/assets/grammars/tree-sitter-ruby.wasm +0 -0
  17. package/dist/assets/grammars/tree-sitter-rust.wasm +0 -0
  18. package/dist/assets/grammars/tree-sitter-tsx.wasm +0 -0
  19. package/dist/assets/grammars/tree-sitter-typescript.wasm +0 -0
  20. package/dist/assets/grammars/tree-sitter.wasm +0 -0
  21. package/dist/{auth-O6HYIJ6J.js → auth-IC3K6NIZ.js} +22 -15
  22. package/dist/{chunk-KKKPTZLM.js → chunk-2STGEDFV.js} +8 -1
  23. package/dist/chunk-3I7MS7N2.js +40 -0
  24. package/dist/chunk-3R73A4XB.js +69 -0
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  40. package/dist/{chunk-BBUH4VAA.js → chunk-GAEBEQVI.js} +34 -21
  41. package/dist/chunk-GB6QRBXN.js +8543 -0
  42. package/dist/chunk-GEP36Y4X.js +12796 -0
  43. package/dist/{chunk-TKHQ4DGZ.js → chunk-H6F6BYOH.js} +496 -121
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  45. package/dist/chunk-IHXBNWMM.js +137 -0
  46. package/dist/{chunk-ME6DNWIU.js → chunk-IS3ONKU3.js} +7 -1
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  51. package/dist/{chunk-JWHCJDCI.js → chunk-KY56HMHH.js} +145 -61
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  53. package/dist/{chunk-UWIJNAOB.js → chunk-M5T5VO65.js} +109 -42
  54. package/dist/{chunk-JPOWPFCU.js → chunk-MAR7Y6HW.js} +38 -16
  55. package/dist/chunk-N6F52NLF.js +6951 -0
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  58. package/dist/{chunk-VOO7NYPP.js → chunk-PFEFKVGL.js} +22 -6
  59. package/dist/{chunk-6CWDTGUC.js → chunk-PIUMUEMV.js} +7 -1
  60. package/dist/chunk-PV4JUBVJ.js +462 -0
  61. package/dist/{chunk-527KG6XR.js → chunk-Q3RUPKEJ.js} +22 -4
  62. package/dist/{chunk-D5YD55AR.js → chunk-Q5WJOSJ7.js} +11 -1
  63. package/dist/{chunk-5N2FG33Q.js → chunk-R346GLFC.js} +7 -1
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  65. package/dist/{chunk-PIDUD6M2.js → chunk-RDLVBZEO.js} +11 -6
  66. package/dist/{chunk-O4EJEDHO.js → chunk-RPTR2H26.js} +40 -31
  67. package/dist/{chunk-HBU5MTAM.js → chunk-SVNXH4L2.js} +7 -1
  68. package/dist/{chunk-XNISANGE.js → chunk-TEKV33Q5.js} +122 -57
  69. package/dist/chunk-TXOTCRLG.js +15 -0
  70. package/dist/{chunk-VPAWTYLY.js → chunk-WEPFGWHJ.js} +7 -1
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  73. package/dist/{chunk-7BHLZB3A.js → chunk-ZPY3JZ5E.js} +32 -10
  74. package/dist/cli/index.js +39 -33
  75. package/dist/clio-BZVGEUFJ.js +58 -0
  76. package/dist/{components-JVHMUBEB.js → components-DMAOEKFB.js} +26 -9
  77. package/dist/{config-ZFCDBMDC.js → config-IRUQ7SE4.js} +42 -31
  78. package/dist/configure-S7S6F6CL.js +32 -0
  79. package/dist/{context-CDXTP2MP.js → context-3KWFLHJG.js} +17 -11
  80. package/dist/{context-E3KIFVXI.js → context-5RADCKTR.js} +33 -28
  81. package/dist/{context-clear-3F4PLXOS.js → context-clear-7TSNPAAI.js} +36 -28
  82. package/dist/{context-index-Q7YSYTR3.js → context-index-W4RLWOQH.js} +10 -4
  83. package/dist/{docs-YIETIWZI.js → docs-5AWSPS37.js} +16 -10
  84. package/dist/doctor-UC5NAJYQ.js +77 -0
  85. package/dist/{eval-B3KZZESM.js → eval-U6TJHRLX.js} +77 -24
  86. package/dist/{evidence-V67CHM35.js → evidence-YEGUW4L3.js} +34 -26
  87. package/dist/{evolve-YDZSUQYA.js → evolve-TXARCTPG.js} +39 -26
  88. package/dist/{extensions-SRG7XCAH.js → extensions-OZFJ3A3G.js} +13 -7
  89. package/dist/{fleet-CA2CRTVG.js → fleet-6G3DHNYE.js} +45 -37
  90. package/dist/fleet-preflight-DSNT37JK.js +23 -0
  91. package/dist/{init-2OZDJE2D.js → init-KZ5QTF6M.js} +42 -34
  92. package/dist/{memory-3PIQQAKX.js → memory-73ESV5YC.js} +35 -27
  93. package/dist/{models-DY35XI7Y.js → models-A4PVNWJK.js} +34 -23
  94. package/dist/{paths-5OMXW7Z4.js → paths-C4H6IV77.js} +12 -6
  95. package/dist/preload-6WVMHX3A.js +13 -0
  96. package/dist/{reset-PIFYNOS3.js → reset-BGW6OGMV.js} +17 -11
  97. package/dist/{run-3VSPP24F.js → run-YTPEYQOH.js} +60 -48
  98. package/dist/{share-D36RQCXM.js → share-YIFFV4NQ.js} +16 -10
  99. package/dist/{skills-F2MRLELY.js → skills-2V6RA3OQ.js} +18 -11
  100. package/dist/{skills-eval-E2ZTW4PL.js → skills-eval-S2TVJO4F.js} +45 -36
  101. package/dist/{targets-DZMEZAH4.js → targets-TYXLPB23.js} +61 -59
  102. package/dist/{trace-7NYCUI2J.js → trace-GGOJ6Q6Z.js} +9 -3
  103. package/dist/{uninstall-AD3JWHBB.js → uninstall-LLLT4F4W.js} +14 -8
  104. package/dist/{upgrade-WYYBKGDY.js → upgrade-33G2LMM5.js} +45 -23
  105. package/dist/{usage-ULIDAGFF.js → usage-ZAFSXKKG.js} +35 -27
  106. package/dist/version-KGEG7EPO.js +21 -0
  107. package/dist/{wiki-generate-PKFIX6OB.js → wiki-generate-NUQCVOQ3.js} +55 -45
  108. package/dist/worker/entry.js +101 -43
  109. package/docs/README.md +12 -9
  110. package/docs/acp.md +28 -5
  111. package/docs/alcf-provider.md +1 -1
  112. package/docs/architecture.md +23 -2
  113. package/docs/artifact-placement.md +101 -0
  114. package/docs/artifact-versions.md +1 -1
  115. package/docs/built-in-agents.md +4 -2
  116. package/docs/capacity-and-scheduling.md +1 -1
  117. package/docs/commands-and-modes.md +125 -41
  118. package/docs/configuration-and-targets.md +88 -18
  119. package/docs/context-engine.md +6 -2
  120. package/docs/development-pipeline.md +77 -0
  121. package/docs/documentation-coverage.md +4 -4
  122. package/docs/documentation-guide.md +3 -3
  123. package/docs/environment-variables.md +2 -1
  124. package/docs/eval-runner.md +3 -3
  125. package/docs/evals-internal.md +2 -2
  126. package/docs/evidence-and-memory.md +6 -2
  127. package/docs/evolution.md +1 -1
  128. package/docs/exit-codes-and-output.md +1 -1
  129. package/docs/extensions-and-sharing.md +18 -11
  130. package/docs/fleet-demo-runbook.md +22 -23
  131. package/docs/fleet-dispatch.md +111 -12
  132. package/docs/glossary.md +107 -15
  133. package/docs/html/agents_blueprint.html +3 -3
  134. package/docs/html/alcf_blueprint.html +3 -3
  135. package/docs/html/architecture_blueprint.html +3 -3
  136. package/docs/html/commands_blueprint.html +187 -42
  137. package/docs/html/configuration_blueprint.html +7 -7
  138. package/docs/html/context_blueprint.html +3 -3
  139. package/docs/html/documentation_blueprint.html +1 -1
  140. package/docs/html/environment_blueprint.html +3 -3
  141. package/docs/html/eval_blueprint.html +4 -4
  142. package/docs/html/evals_internal_blueprint.html +3 -3
  143. package/docs/html/evolution_blueprint.html +3 -3
  144. package/docs/html/extensions_blueprint.html +3 -3
  145. package/docs/html/fleet_dispatch_blueprint.html +8 -8
  146. package/docs/html/index.html +5 -5
  147. package/docs/html/lifecycle_blueprint.html +4 -4
  148. package/docs/html/memory_blueprint.html +3 -3
  149. package/docs/html/middleware_blueprint.html +3 -3
  150. package/docs/html/models_blueprint.html +2 -2
  151. package/docs/html/observability_blueprint.html +2 -2
  152. package/docs/html/provider_adapter_blueprint.html +3 -3
  153. package/docs/html/safety_blueprint.html +3 -3
  154. package/docs/html/skills_blueprint.html +2 -2
  155. package/docs/html/soak_blueprint.html +3 -3
  156. package/docs/html/tool_usage_blueprint.html +4 -4
  157. package/docs/html/tools_blueprint.html +2 -2
  158. package/docs/html/trace_blueprint.html +3 -3
  159. package/docs/html/tui_design_blueprint.html +100 -40
  160. package/docs/html/validation_blueprint.html +1 -1
  161. package/docs/html/worker_dispatch_blueprint.html +3 -3
  162. package/docs/installation-and-lifecycle.md +62 -11
  163. package/docs/middleware-and-components.md +1 -1
  164. package/docs/model-catalog.md +2 -2
  165. package/docs/observability.md +3 -3
  166. package/docs/proactive-memory.md +12 -12
  167. package/docs/prompt-envelope-and-tools.md +2 -2
  168. package/docs/provider-adapter-cookbook.md +1 -1
  169. package/docs/release-cut-checklist.md +4 -0
  170. package/docs/safety-model.md +21 -5
  171. package/docs/scientific-validation.md +3 -3
  172. package/docs/session-lifecycle.md +2 -2
  173. package/docs/skills-marketplace.md +1 -1
  174. package/docs/time-conventions.md +101 -0
  175. package/docs/tool-usage.md +5 -4
  176. package/docs/trace-store.md +1 -1
  177. package/docs/troubleshooting.md +1 -1
  178. package/docs/tui-design.md +83 -27
  179. package/docs/worker-dispatch-mechanics.md +3 -3
  180. package/package.json +16 -16
  181. package/skills/README.md +5 -6
  182. package/skills/git/file-ticket/SKILL.md +107 -0
  183. package/skills/git/file-ticket/evals.md +54 -0
  184. package/skills/git/fix-issue/SKILL.md +106 -0
  185. package/skills/git/fix-issue/evals.md +71 -0
  186. package/skills/git/ship/SKILL.md +92 -0
  187. package/skills/git/ship/evals.md +72 -0
  188. package/skills/skill-marketplace.json +12 -20
  189. package/src/cli/acp.ts +88 -0
  190. package/src/cli/agents.ts +60 -0
  191. package/src/cli/args.ts +280 -0
  192. package/src/cli/argv.ts +170 -0
  193. package/src/cli/ask.ts +34 -0
  194. package/src/cli/auth.ts +468 -0
  195. package/src/cli/bootstrap-generate.ts +498 -0
  196. package/src/cli/clio.ts +34 -0
  197. package/src/cli/components.ts +195 -0
  198. package/src/cli/config-inspect.ts +330 -0
  199. package/src/cli/config.ts +72 -0
  200. package/src/cli/configure-interop.ts +67 -0
  201. package/src/cli/configure-layout.ts +172 -0
  202. package/src/cli/configure.ts +1487 -0
  203. package/src/cli/context-clear.ts +76 -0
  204. package/src/cli/context-index.ts +102 -0
  205. package/src/cli/context.ts +316 -0
  206. package/src/cli/default-target.ts +63 -0
  207. package/src/cli/docs.ts +340 -0
  208. package/src/cli/doctor.ts +54 -0
  209. package/src/cli/eval.ts +315 -0
  210. package/src/cli/evidence.ts +222 -0
  211. package/src/cli/evolve.ts +219 -0
  212. package/src/cli/extensions.ts +205 -0
  213. package/src/cli/fleet.ts +827 -0
  214. package/src/cli/index.ts +309 -0
  215. package/src/cli/init.ts +219 -0
  216. package/src/cli/initial-message.ts +47 -0
  217. package/src/cli/internal-dispatch.ts +55 -0
  218. package/src/cli/memory.ts +180 -0
  219. package/src/cli/models.ts +257 -0
  220. package/src/cli/modes/json-stream.ts +85 -0
  221. package/src/cli/modes/jsonl.ts +9 -0
  222. package/src/cli/modes/print.ts +589 -0
  223. package/src/cli/oauth-manual-input.ts +72 -0
  224. package/src/cli/oauth-select.ts +36 -0
  225. package/src/cli/output-guard.ts +48 -0
  226. package/src/cli/paths.ts +44 -0
  227. package/src/cli/provider-target.ts +113 -0
  228. package/src/cli/removal.ts +72 -0
  229. package/src/cli/reset.ts +253 -0
  230. package/src/cli/run.ts +497 -0
  231. package/src/cli/share.ts +243 -0
  232. package/src/cli/shared.ts +60 -0
  233. package/src/cli/skills-eval.ts +1225 -0
  234. package/src/cli/skills.ts +470 -0
  235. package/src/cli/steer-channel.ts +86 -0
  236. package/src/cli/targets.ts +1150 -0
  237. package/src/cli/text-layout.ts +102 -0
  238. package/src/cli/trace.ts +274 -0
  239. package/src/cli/uninstall.ts +405 -0
  240. package/src/cli/upgrade.ts +270 -0
  241. package/src/cli/usage.ts +869 -0
  242. package/src/cli/validate-model.ts +28 -0
  243. package/src/cli/version.ts +7 -0
  244. package/src/cli/wiki-generate.ts +509 -0
  245. package/src/core/artifact-paths.ts +43 -0
  246. package/src/core/bash-exec.ts +242 -0
  247. package/src/core/boot-trace.ts +37 -0
  248. package/src/core/bus-events.ts +728 -0
  249. package/src/core/bus-trace.ts +53 -0
  250. package/src/core/c-header-language.ts +265 -0
  251. package/src/core/clio-repo.ts +78 -0
  252. package/src/core/config.ts +1593 -0
  253. package/src/core/context-floor.ts +33 -0
  254. package/src/core/defaults.ts +625 -0
  255. package/src/core/domain-loader.ts +170 -0
  256. package/src/core/event-bus.ts +94 -0
  257. package/src/core/file-references.ts +282 -0
  258. package/src/core/guardrails.ts +185 -0
  259. package/src/core/headless-permission.ts +21 -0
  260. package/src/core/init.ts +223 -0
  261. package/src/core/json-payload.ts +58 -0
  262. package/src/core/package-root.ts +54 -0
  263. package/src/core/path-canonical.ts +37 -0
  264. package/src/core/process-identity.ts +41 -0
  265. package/src/core/recent-models.ts +91 -0
  266. package/src/core/release.ts +2 -0
  267. package/src/core/residency-protection.ts +56 -0
  268. package/src/core/resolve-config-value.ts +88 -0
  269. package/src/core/response-schema.ts +279 -0
  270. package/src/core/run-overrides.ts +77 -0
  271. package/src/core/safe-exec.ts +193 -0
  272. package/src/core/safe-id.ts +37 -0
  273. package/src/core/safe-resource-write.ts +162 -0
  274. package/src/core/session-routing.ts +339 -0
  275. package/src/core/settings-layers.ts +220 -0
  276. package/src/core/shared-bus.ts +8 -0
  277. package/src/core/shell-quote.ts +26 -0
  278. package/src/core/skill-activation.ts +190 -0
  279. package/src/core/startup-timer.ts +37 -0
  280. package/src/core/state-file-lock.ts +207 -0
  281. package/src/core/termination.ts +202 -0
  282. package/src/core/timers.ts +38 -0
  283. package/src/core/tool-names.ts +65 -0
  284. package/src/core/verification-scripts.ts +13 -0
  285. package/src/core/workspace-files.ts +492 -0
  286. package/src/core/xdg.ts +177 -0
  287. package/src/domains/agents/builtins/architect.md +4 -4
  288. package/src/domains/agents/builtins/coder.md +3 -2
  289. package/src/domains/agents/builtins/debugger.md +1 -1
  290. package/src/domains/agents/builtins/documenter.md +1 -1
  291. package/src/domains/agents/builtins/git-master.md +3 -3
  292. package/src/domains/agents/builtins/provenance.md +1 -1
  293. package/src/domains/agents/builtins/researcher.md +1 -1
  294. package/src/domains/agents/builtins/scout.md +1 -1
  295. package/src/domains/agents/builtins/tester.md +1 -1
  296. package/src/domains/agents/builtins/verifier.md +1 -1
  297. package/src/domains/agents/builtins/wiki-writer.md +1 -1
  298. package/src/domains/agents/catalog.ts +172 -0
  299. package/src/domains/agents/contract.ts +16 -0
  300. package/src/domains/agents/extension.ts +110 -0
  301. package/src/domains/agents/fleet-commands.ts +154 -0
  302. package/src/domains/agents/fleet-contract.ts +797 -0
  303. package/src/domains/agents/frontmatter.ts +40 -0
  304. package/src/domains/agents/index.ts +102 -0
  305. package/src/domains/agents/manifest.ts +6 -0
  306. package/src/domains/agents/recipe-schema.ts +202 -0
  307. package/src/domains/agents/recipe.ts +125 -0
  308. package/src/domains/agents/registry.ts +111 -0
  309. package/src/domains/agents/result-contract.ts +1265 -0
  310. package/src/domains/agents/spec.ts +371 -0
  311. package/src/domains/agents/write-boundary.ts +109 -0
  312. package/src/domains/components/diff.ts +99 -0
  313. package/src/domains/components/hash.ts +21 -0
  314. package/src/domains/components/index.ts +3 -0
  315. package/src/domains/components/scan.ts +304 -0
  316. package/src/domains/components/snapshot.ts +108 -0
  317. package/src/domains/components/types.ts +82 -0
  318. package/src/domains/config/agent-namespace.ts +13 -0
  319. package/src/domains/config/classify.ts +94 -0
  320. package/src/domains/config/contract.ts +22 -0
  321. package/src/domains/config/extension.ts +136 -0
  322. package/src/domains/config/index.ts +13 -0
  323. package/src/domains/config/keybindings.ts +164 -0
  324. package/src/domains/config/manifest.ts +6 -0
  325. package/src/domains/config/watcher.ts +41 -0
  326. package/src/domains/context/adoption.ts +880 -0
  327. package/src/domains/context/bootstrap-prompt.ts +273 -0
  328. package/src/domains/context/bootstrap.ts +1409 -0
  329. package/src/domains/context/clear.ts +86 -0
  330. package/src/domains/context/clio-md.ts +327 -0
  331. package/src/domains/context/codewiki/cmake.ts +356 -0
  332. package/src/domains/context/codewiki/cooperative.ts +46 -0
  333. package/src/domains/context/codewiki/digest.ts +135 -0
  334. package/src/domains/context/codewiki/grammar-assets.ts +33 -0
  335. package/src/domains/context/codewiki/indexer.ts +1614 -0
  336. package/src/domains/context/codewiki/tree-sitter.ts +771 -0
  337. package/src/domains/context/contract.ts +62 -0
  338. package/src/domains/context/excluded-dirs.ts +1 -0
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  warnings.map(warn => `<li>${warn}</li>`).join('') + `</ul>`;
955
955
  } else {
956
956
  output.className = 'status-panel success';
957
- output.innerHTML = `<strong>Validation Success:</strong> settings.yaml is structurally valid and fully conforms to the Clio Coder v0.3.0 schema settings constraints.`;
957
+ output.innerHTML = `<strong>Validation Success:</strong> settings.yaml is structurally valid and fully conforms to the Clio Coder v0.3.1 schema settings constraints.`;
958
958
  }
959
959
  }
960
960
 
package/docs/html/context_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Clio Coder Context Engine Blueprint (v0.3.0)</title>
6
+ <title>Clio Coder Context Engine Blueprint (v0.3.1)</title>
7
7
 
8
8
  <style>
9
9
  :root {
@@ -381,7 +381,7 @@
381
381
  </div>
382
382
  </div>
383
383
  <div class="header-right">
384
- <span class="version-badge">Clio Coder v0.3.0</span>
384
+ <span class="version-badge">Clio Coder v0.3.1</span>
385
385
  <a href="index.html" class="back-btn">
386
386
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
387
387
  Dashboard Hub
@@ -509,7 +509,7 @@
509
509
  </main>
510
510
 
511
511
  <footer>
512
- <p>Clio Coder Context Engine spec &bull; Version 0.3.0</p>
512
+ <p>Clio Coder Context Engine spec &bull; Version 0.3.1</p>
513
513
  </footer>
514
514
  </div>
515
515
 
package/docs/html/documentation_blueprint.html CHANGED
@@ -448,7 +448,7 @@
448
448
  </div>
449
449
  </div>
450
450
  <div class="header-right">
451
- <span class="version-badge">Clio Coder v0.3.0</span>
451
+ <span class="version-badge">Clio Coder v0.3.1</span>
452
452
  <a href="index.html" class="back-btn">
453
453
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
454
454
  Dashboard Hub
package/docs/html/environment_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Environment Variables Blueprint (v0.3.0)</title>
6
+ <title>Environment Variables Blueprint (v0.3.1)</title>
7
7
  <link rel="stylesheet" href="shared.css">
8
8
  <style>
9
9
  /* Environment resolver custom styling */
@@ -76,7 +76,7 @@
76
76
  </div>
77
77
  </div>
78
78
  <div class="header-right">
79
- <span class="version-badge">Clio Coder v0.3.0</span>
79
+ <span class="version-badge">Clio Coder v0.3.1</span>
80
80
  <a href="index.html" class="back-btn">
81
81
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
82
82
  Dashboard Hub
@@ -313,7 +313,7 @@
313
313
  </div>
314
314
 
315
315
  <footer>
316
- <p>Clio Coder Env Blueprint &bull; Version 0.3.0 &bull; Gnosis Research Center</p>
316
+ <p>Clio Coder Env Blueprint &bull; Version 0.3.1 &bull; Gnosis Research Center</p>
317
317
  </footer>
318
318
  </div>
319
319
 
package/docs/html/eval_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Clio Coder Evaluation Runner Blueprint (v0.3.0)</title>
6
+ <title>Clio Coder Evaluation Runner Blueprint (v0.3.1)</title>
7
7
 
8
8
  <style>
9
9
  :root {
@@ -422,7 +422,7 @@
422
422
  </div>
423
423
  </div>
424
424
  <div class="header-right">
425
- <span class="version-badge">Clio Coder v0.3.0</span>
425
+ <span class="version-badge">Clio Coder v0.3.1</span>
426
426
  <a href="index.html" class="back-btn">
427
427
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
428
428
  Dashboard Hub
@@ -579,7 +579,7 @@ tasks:
579
579
  </main>
580
580
 
581
581
  <footer>
582
- <p>Clio Coder Eval Runner spec &bull; Version 0.3.0</p>
582
+ <p>Clio Coder Eval Runner spec &bull; Version 0.3.1</p>
583
583
  </footer>
584
584
  </div>
585
585
 
@@ -684,7 +684,7 @@ tasks:
684
684
 
685
685
  setTimeout(() => {
686
686
  consoleEl.innerHTML += `\n[SH] Running verifier: node dist/cli/index.js --version`;
687
- consoleEl.innerHTML += `\n[SH] stdout: Clio Coder v0.3.0`;
687
+ consoleEl.innerHTML += `\n[SH] stdout: Clio Coder v0.3.1`;
688
688
  consoleEl.innerHTML += `\n[SH] exit code: 0`;
689
689
  }, 900);
690
690
 
package/docs/html/evals_internal_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Internal Eval Suites Blueprint (v0.3.0)</title>
6
+ <title>Internal Eval Suites Blueprint (v0.3.1)</title>
7
7
  <link rel="stylesheet" href="shared.css">
8
8
  <style>
9
9
  .internal-warning {
@@ -38,7 +38,7 @@
38
38
  </div>
39
39
  </div>
40
40
  <div class="header-right">
41
- <span class="version-badge" style="color: var(--color-rose); border-color: rgba(239, 68, 68, 0.3); background: rgba(239, 68, 68, 0.08);">Clio Coder v0.3.0 (Internal)</span>
41
+ <span class="version-badge" style="color: var(--color-rose); border-color: rgba(239, 68, 68, 0.3); background: rgba(239, 68, 68, 0.08);">Clio Coder v0.3.1 (Internal)</span>
42
42
  <a href="index.html" class="back-btn">
43
43
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
44
44
  Dashboard Hub
@@ -132,7 +132,7 @@
132
132
  </div>
133
133
 
134
134
  <footer>
135
- <p>Clio Coder Internal Evals Blueprint &bull; Version 0.3.0 &bull; Gnosis Research Center</p>
135
+ <p>Clio Coder Internal Evals Blueprint &bull; Version 0.3.1 &bull; Gnosis Research Center</p>
136
136
  </footer>
137
137
  </div>
138
138
 
package/docs/html/evolution_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Clio Coder Code Evolution Blueprint (v0.3.0)</title>
6
+ <title>Clio Coder Code Evolution Blueprint (v0.3.1)</title>
7
7
 
8
8
  <style>
9
9
  :root {
@@ -384,7 +384,7 @@
384
384
  </div>
385
385
  </div>
386
386
  <div class="header-right">
387
- <span class="version-badge">Clio Coder v0.3.0</span>
387
+ <span class="version-badge">Clio Coder v0.3.1</span>
388
388
  <a href="index.html" class="back-btn">
389
389
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
390
390
  Dashboard Hub
@@ -502,7 +502,7 @@
502
502
  </main>
503
503
 
504
504
  <footer>
505
- <p>Clio Coder Evolution spec &bull; Version 0.3.0</p>
505
+ <p>Clio Coder Evolution spec &bull; Version 0.3.1</p>
506
506
  </footer>
507
507
  </div>
508
508
 
package/docs/html/extensions_blueprint.html CHANGED
@@ -682,7 +682,7 @@
682
682
  </div>
683
683
  </div>
684
684
  <div class="header-right">
685
- <span class="version-badge">Clio Coder v0.3.0</span>
685
+ <span class="version-badge">Clio Coder v0.3.1</span>
686
686
  <a href="index.html" class="back-btn">
687
687
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
688
688
  Dashboard Hub
@@ -1126,7 +1126,7 @@ clio-kit/ # Ext package root
1126
1126
  "formatVersion": 1,
1127
1127
  "manifest": {
1128
1128
  "format": "clio.share.v1",
1129
- "clioVersion": "0.3.0",
1129
+ "clioVersion": "0.3.1",
1130
1130
  "createdAt": "2026-06-06T17:53:00Z",
1131
1131
  "files": [
1132
1132
  {
@@ -1932,7 +1932,7 @@ Provide advanced custom guidance on MPI bindings.`
1932
1932
  formatVersion: 1,
1933
1933
  manifest: {
1934
1934
  format: 'clio.share.v1',
1935
- clioVersion: '0.3.0',
1935
+ clioVersion: '0.3.1',
1936
1936
  createdAt: new Date().toISOString(),
1937
1937
  files: manifestFiles
1938
1938
  },
package/docs/html/fleet_dispatch_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Fleet Dispatch Architecture &amp; Mechanics (v0.3.0)</title>
6
+ <title>Fleet Dispatch Architecture &amp; Mechanics (v0.3.1)</title>
7
7
  <link rel="stylesheet" href="shared.css">
8
8
  <style>
9
9
  .fleet-grid {
@@ -93,12 +93,12 @@
93
93
  <div class="meta-chips-row">
94
94
  <span class="chip">Source: docs/fleet-dispatch.md</span>
95
95
  <span class="chip chip-orange">clio-coder docs fleet</span>
96
- <span class="badge-v030">v0.3.0 Architecture</span>
96
+ <span class="badge-v030">v0.3.1 Architecture</span>
97
97
  </div>
98
98
  </div>
99
99
  </div>
100
100
  <div class="header-right">
101
- <span class="version-badge">Clio Coder v0.3.0</span>
101
+ <span class="version-badge">Clio Coder v0.3.1</span>
102
102
  <a href="index.html" class="back-btn">
103
103
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Back</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
104
104
  Dashboard Hub
@@ -119,8 +119,8 @@
119
119
  <main>
120
120
  <!-- Architecture Overview Card -->
121
121
  <div class="glass-card">
122
- <h2>Fleet Dispatch v0.3.0 Overview</h2>
123
- <p>Clio's Fleet Dispatch orchestrates bounded agents across local processes and remote HPC nodes via SSH transport. In v0.3.0, dispatch includes process-safe capacity leases, WorkerSpec v3 attestation, ExecutionPlan v2 DAGs, Contract v4 per-step write boundaries (detect-and-rollback), bounded check/repair loops, deterministic code steps, strict receipt integrity v15, measured shadow routing, readiness-gated active routing, transactional editing attempts, and bounded agent automation.</p>
122
+ <h2>Fleet Dispatch v0.3.1 Overview</h2>
123
+ <p>Clio's Fleet Dispatch orchestrates bounded agents across local processes and remote HPC nodes via SSH transport. In v0.3.1, dispatch includes process-safe capacity leases, WorkerSpec v3 attestation, ExecutionPlan v2 DAGs, Contract v4 per-step write boundaries (detect-and-rollback), bounded check/repair loops, deterministic code steps, strict receipt integrity v15, measured shadow routing, readiness-gated active routing, transactional editing attempts, and bounded agent automation.</p>
124
124
  </div>
125
125
 
126
126
  <!-- Interactive Tabs Navigation -->
@@ -164,12 +164,12 @@
164
164
  <div class="tab-pane" id="pane-scout">
165
165
  <div class="interactive-panel">
166
166
  <h3>Advisory Scout Reconnaissance &amp; Bounded Synthesis</h3>
167
- <p>The operating contract steers explicit broad repository exploration to the read-only Scout recipe. After nine or more manual read-only exploration calls without a successful Scout dispatch, middleware emits a continuation nudge; direct reads remain allowed.</p>
167
+ <p>The operating contract steers explicit broad repository exploration to the read-only Scout recipe. After nine or more manual read-only exploration calls without a successful Scout dispatch, middleware emits one advisory notice; direct reads remain allowed.</p>
168
168
  <div class="terminal-window" id="scoutTerminal">
169
169
  <div class="term-line"><span class="term-prompt">orchestrator$</span> clio-coder dispatch --query "explore repository architecture and dependencies"</div>
170
170
  <div class="term-line term-out">[dispatch] evaluating task profile: broad reconnaissance query detected.</div>
171
171
  <div class="term-line term-out">[dispatch] broad exploration is advisory-routed to the read-only Scout recipe.</div>
172
- <div class="term-line term-out">[middleware] 9+ manual read-only calls without Scout: continuation nudge emitted.</div>
172
+ <div class="term-line term-out">[middleware] 9+ manual read-only calls without Scout: advisory notice emitted.</div>
173
173
  <div class="term-line term-success">[scout-1] launched on node-login-01 (SSH). Exploration budget: 18 calls; read reserve: 4.</div>
174
174
  <div class="term-line term-success">[scout-1] synthesis phase: text-only handoff with live path:line citations.</div>
175
175
  </div>
@@ -235,7 +235,7 @@
235
235
  </div>
236
236
 
237
237
  <footer>
238
- <p>Clio Coder Fleet Dispatch Mechanics &bull; Version 0.3.0</p>
238
+ <p>Clio Coder Fleet Dispatch Mechanics &bull; Version 0.3.1</p>
239
239
  <p>IOWarp / Gnosis Research Center &bull; iowarp.ai</p>
240
240
  </footer>
241
241
  </div>
package/docs/html/index.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Clio Coder Documentation Hub (v0.3.0)</title>
6
+ <title>Clio Coder Documentation Hub (v0.3.1)</title>
7
7
  <link rel="stylesheet" href="shared.css">
8
8
  <style>
9
9
  /* Unique homepage layouts */
@@ -269,7 +269,7 @@
269
269
  <div class="meta-badges">
270
270
  <span class="meta-badge version">
271
271
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><circle cx="12" cy="12" r="10"></circle><polyline points="12 6 12 12 16 14"></polyline></svg>
272
- v0.3.0
272
+ v0.3.1
273
273
  </span>
274
274
  <span class="meta-badge" style="border-color: rgba(255,255,255,0.08); color: var(--text-muted);">
275
275
  CLI command: <code style="color: var(--color-orange); margin-left: 0.35rem;">clio-coder docs [topic]</code>
@@ -495,7 +495,7 @@
495
495
  <h3 class="card-title">Tool Usage Reference</h3>
496
496
  <span class="card-badge badge-ref">Ref</span>
497
497
  </div>
498
- <p class="card-desc">In-depth reference for all 19 worker tools including parameters, typical payloads, prepareArguments normalizers, and error examples.</p>
498
+ <p class="card-desc">In-depth reference for all 20 worker tools including parameters, typical payloads, prepareArguments normalizers, and error examples.</p>
499
499
  <div class="card-footer">
500
500
  <span class="path">tool-usage.md</span>
501
501
  <span class="feature">Tool Atlas</span>
@@ -820,7 +820,7 @@
820
820
  <h3 class="card-title">Glossary</h3>
821
821
  <span class="card-badge badge-markdown">Markdown Spec</span>
822
822
  </div>
823
- <p class="card-desc">Authoritative definitions of 17 core architectural concepts mapped to their owning TypeScript types in src/.</p>
823
+ <p class="card-desc">Authoritative definitions of 40 core architectural concepts mapped to their owning TypeScript types in src/.</p>
824
824
  <div class="card-footer">
825
825
  <span class="path">glossary.md</span>
826
826
  <span class="feature" style="color: #a5b4fc;">17 Core Terms ↗</span>
@@ -860,7 +860,7 @@ clio-coder docs --no-open</code></pre>
860
860
  </div>
861
861
 
862
862
  <footer>
863
- <p>Clio Coder Visual Documentation Center &bull; Version 0.3.0</p>
863
+ <p>Clio Coder Visual Documentation Center &bull; Version 0.3.1</p>
864
864
  <p>Maintainer: Illinois Institute of Technology / Gnosis Research Center &bull; iowarp.ai</p>
865
865
  </footer>
866
866
  </div>
package/docs/html/lifecycle_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Clio Coder Lifecycle Operations Blueprint (v0.3.0)</title>
6
+ <title>Clio Coder Lifecycle Operations Blueprint (v0.3.1)</title>
7
7
 
8
8
  <style>
9
9
  :root {
@@ -414,7 +414,7 @@
414
414
  </div>
415
415
  </div>
416
416
  <div class="header-right">
417
- <span class="version-badge">Clio Coder v0.3.0</span>
417
+ <span class="version-badge">Clio Coder v0.3.1</span>
418
418
  <a href="index.html" class="back-btn">
419
419
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
420
420
  Dashboard Hub
@@ -616,7 +616,7 @@ clio-coder --version</code></pre>
616
616
  </main>
617
617
 
618
618
  <footer>
619
- <p>Clio Coder Lifecycle spec &bull; Version 0.3.0</p>
619
+ <p>Clio Coder Lifecycle spec &bull; Version 0.3.1</p>
620
620
  </footer>
621
621
  </div>
622
622
 
@@ -709,7 +709,7 @@ clio-coder --version</code></pre>
709
709
  }, 1000);
710
710
 
711
711
  setTimeout(() => {
712
- consoleEl.innerHTML += `\n[METADATA] Writing ${state}/install.json: { version: "0.3.0", node: "v22.19.0" }`;
712
+ consoleEl.innerHTML += `\n[METADATA] Writing ${state}/install.json: { version: "0.3.1", node: "v22.19.0" }`;
713
713
  consoleEl.innerHTML += `\n[BOOT] initializeClioHome() completed successfully.`;
714
714
  }, 1400);
715
715
  }
package/docs/html/memory_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Clio Coder Evidence &amp; Memory Blueprint (v0.3.0)</title>
6
+ <title>Clio Coder Evidence &amp; Memory Blueprint (v0.3.1)</title>
7
7
 
8
8
  <style>
9
9
  :root {
@@ -405,7 +405,7 @@
405
405
  </div>
406
406
  </div>
407
407
  <div class="header-right">
408
- <span class="version-badge">Clio Coder v0.3.0</span>
408
+ <span class="version-badge">Clio Coder v0.3.1</span>
409
409
  <a href="index.html" class="back-btn">
410
410
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
411
411
  Dashboard Hub
@@ -633,7 +633,7 @@
633
633
  </main>
634
634
 
635
635
  <footer>
636
- <p>Clio Coder Memory spec &bull; Version 0.3.0</p>
636
+ <p>Clio Coder Memory spec &bull; Version 0.3.1</p>
637
637
  </footer>
638
638
  </div>
639
639
 
package/docs/html/middleware_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Clio Coder Middleware &amp; Components Blueprint (v0.3.0)</title>
6
+ <title>Clio Coder Middleware &amp; Components Blueprint (v0.3.1)</title>
7
7
 
8
8
  <style>
9
9
  :root {
@@ -429,7 +429,7 @@
429
429
  </div>
430
430
  </div>
431
431
  <div class="header-right">
432
- <span class="version-badge">Clio Coder v0.3.0</span>
432
+ <span class="version-badge">Clio Coder v0.3.1</span>
433
433
  <a href="index.html" class="back-btn">
434
434
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
435
435
  Dashboard Hub
@@ -556,7 +556,7 @@
556
556
  </main>
557
557
 
558
558
  <footer>
559
- <p>Clio Coder Middleware spec &bull; Version 0.3.0</p>
559
+ <p>Clio Coder Middleware spec &bull; Version 0.3.1</p>
560
560
  </footer>
561
561
  </div>
562
562
 
package/docs/html/models_blueprint.html CHANGED
@@ -908,7 +908,7 @@
908
908
  </div>
909
909
  </div>
910
910
  <div class="header-right">
911
- <span class="version-badge">Clio Coder v0.3.0</span>
911
+ <span class="version-badge">Clio Coder v0.3.1</span>
912
912
  <a href="index.html" class="back-btn">
913
913
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
914
914
  Dashboard Hub
@@ -1633,7 +1633,7 @@
1633
1633
  </div>
1634
1634
 
1635
1635
  <footer>
1636
- <p>Clio Coder Visual Specification Blueprint. Product Version v0.3.0. Designed with high-performance dark aesthetics.</p>
1636
+ <p>Clio Coder Visual Specification Blueprint. Product Version v0.3.1. Designed with high-performance dark aesthetics.</p>
1637
1637
  </footer>
1638
1638
  </div>
1639
1639
 
package/docs/html/observability_blueprint.html CHANGED
@@ -382,7 +382,7 @@
382
382
  </a>
383
383
  <div class="version-tag">
384
384
  <div class="version-dot"></div>
385
- Clio Coder v0.3.0
385
+ Clio Coder v0.3.1
386
386
  </div>
387
387
  </div>
388
388
  </header>
@@ -459,7 +459,7 @@
459
459
  </div>
460
460
 
461
461
  <footer>
462
- <p>Clio Coder Visual Specification Blueprint. Product Version v0.3.0. Designed with high-performance dark aesthetics.</p>
462
+ <p>Clio Coder Visual Specification Blueprint. Product Version v0.3.1. Designed with high-performance dark aesthetics.</p>
463
463
  </footer>
464
464
  </div>
465
465
 
package/docs/html/provider_adapter_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Provider Adapter Cookbook Blueprint (v0.3.0)</title>
6
+ <title>Provider Adapter Cookbook Blueprint (v0.3.1)</title>
7
7
  <link rel="stylesheet" href="shared.css">
8
8
  <style>
9
9
  /* Custom builder style */
@@ -45,7 +45,7 @@
45
45
  </div>
46
46
  </div>
47
47
  <div class="header-right">
48
- <span class="version-badge">Clio Coder v0.3.0</span>
48
+ <span class="version-badge">Clio Coder v0.3.1</span>
49
49
  <a href="index.html" class="back-btn">
50
50
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
51
51
  Dashboard Hub
@@ -179,7 +179,7 @@
179
179
  </div>
180
180
 
181
181
  <footer>
182
- <p>Clio Coder Provider Adapter Cookbook Blueprint &bull; Version 0.3.0 &bull; Gnosis Research Center</p>
182
+ <p>Clio Coder Provider Adapter Cookbook Blueprint &bull; Version 0.3.1 &bull; Gnosis Research Center</p>
183
183
  </footer>
184
184
  </div>
185
185
 
package/docs/html/safety_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Clio Coder Safety Model Blueprint (v0.3.0)</title>
6
+ <title>Clio Coder Safety Model Blueprint (v0.3.1)</title>
7
7
 
8
8
  <style>
9
9
  :root {
@@ -581,7 +581,7 @@
581
581
  </div>
582
582
  </div>
583
583
  <div class="header-right">
584
- <span class="version-badge">Clio Coder v0.3.0</span>
584
+ <span class="version-badge">Clio Coder v0.3.1</span>
585
585
  <a href="index.html" class="back-btn">
586
586
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
587
587
  Dashboard Hub
@@ -919,7 +919,7 @@ commands:
919
919
  </main>
920
920
 
921
921
  <footer>
922
- <p>Clio Coder Safety Model Specification Dashboard &bull; Version 0.3.0</p>
922
+ <p>Clio Coder Safety Model Specification Dashboard &bull; Version 0.3.1</p>
923
923
  </footer>
924
924
  </div>
925
925
 
package/docs/html/skills_blueprint.html CHANGED
@@ -406,7 +406,7 @@
406
406
  </a>
407
407
  <div class="version-tag">
408
408
  <div class="version-dot"></div>
409
- Clio Coder v0.3.0
409
+ Clio Coder v0.3.1
410
410
  </div>
411
411
  </div>
412
412
  </header>
@@ -483,7 +483,7 @@
483
483
  </div>
484
484
 
485
485
  <footer>
486
- <p>Clio Coder Visual Specification Blueprint. Product Version v0.3.0. Designed with high-performance dark aesthetics.</p>
486
+ <p>Clio Coder Visual Specification Blueprint. Product Version v0.3.1. Designed with high-performance dark aesthetics.</p>
487
487
  </footer>
488
488
  </div>
489
489
 
package/docs/html/soak_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Clio Coder Soak Benchmark Blueprint (v0.3.0)</title>
6
+ <title>Clio Coder Soak Benchmark Blueprint (v0.3.1)</title>
7
7
  <link rel="stylesheet" href="shared.css">
8
8
  <style>
9
9
  .suite-card {
@@ -78,10 +78,10 @@
78
78
  <header>
79
79
  <div>
80
80
  <h1>Soak Benchmark Blueprint</h1>
81
- <p style="color: var(--text-muted);">Interactive specification and invariant reference for Clio soak suites (v0.3.0)</p>
81
+ <p style="color: var(--text-muted);">Interactive specification and invariant reference for Clio soak suites (v0.3.1)</p>
82
82
  </div>
83
83
  <div>
84
- <span class="badge-tag">v0.3.0</span>
84
+ <span class="badge-tag">v0.3.1</span>
85
85
  <span class="badge-tag badge-orange">Machinery Invariants</span>
86
86
  </div>
87
87
  </header>
package/docs/html/tool_usage_blueprint.html CHANGED
@@ -3,7 +3,7 @@
3
3
  <head>
4
4
  <meta charset="UTF-8">
5
5
  <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
- <title>Tool Usage Reference Blueprint (v0.3.0)</title>
6
+ <title>Tool Usage Reference Blueprint (v0.3.1)</title>
7
7
  <link rel="stylesheet" href="shared.css">
8
8
  <style>
9
9
  /* Custom calculator styling */
@@ -76,7 +76,7 @@
76
76
  </div>
77
77
  </div>
78
78
  <div class="header-right">
79
- <span class="version-badge">Clio Coder v0.3.0</span>
79
+ <span class="version-badge">Clio Coder v0.3.1</span>
80
80
  <a href="index.html" class="back-btn">
81
81
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
82
82
  Dashboard Hub
@@ -97,7 +97,7 @@
97
97
  <main>
98
98
  <div class="glass-card">
99
99
  <h2>Overview Summary</h2>
100
- <p>Clio Coder exposes 19 built-in tools organized across 7 distinct planes. This reference covers argument surfaces, result formatting, and turn budget mechanics.</p>
100
+ <p>Clio Coder exposes 20 built-in tools organized across 7 distinct planes. This reference covers argument surfaces, result formatting, and turn budget mechanics.</p>
101
101
  </div>
102
102
 
103
103
  <div class="tabs-nav">
@@ -202,7 +202,7 @@
202
202
  </div>
203
203
 
204
204
  <footer>
205
- <p>Clio Coder Tool Usage Blueprint &bull; Version 0.3.0 &bull; Gnosis Research Center</p>
205
+ <p>Clio Coder Tool Usage Blueprint &bull; Version 0.3.1 &bull; Gnosis Research Center</p>
206
206
  </footer>
207
207
  </div>
208
208
 
package/docs/html/tools_blueprint.html CHANGED
@@ -708,7 +708,7 @@
708
708
  </div>
709
709
  </div>
710
710
  <div class="header-right">
711
- <span class="version-badge">Clio Coder v0.3.0</span>
711
+ <span class="version-badge">Clio Coder v0.3.1</span>
712
712
  <a href="index.html" class="back-btn">
713
713
  <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><title>Icon</title><line x1="19" y1="12" x2="5" y2="12"></line><polyline points="12 19 5 12 12 5"></polyline></svg>
714
714
  Dashboard Hub
@@ -1352,7 +1352,7 @@
1352
1352
 
1353
1353
  // --- SCENARIO DATA & CALCULATOR STATE ---
1354
1354
  const MOCK_FRAGMENTS = {
1355
- identity: `You are Clio Coder, an advanced AI coding assistant engineered for scientific software development, high-performance computing (HPC), and numerical simulation workflows. Your goal is to guide the user in designing, compiling, testing, and debugging complex source code repositories while maintaining safety boundary restrictions. You are running as Clio Coder version 0.3.0.`,
1355
+ identity: `You are Clio Coder, an advanced AI coding assistant engineered for scientific software development, high-performance computing (HPC), and numerical simulation workflows. Your goal is to guide the user in designing, compiling, testing, and debugging complex source code repositories while maintaining safety boundary restrictions. You are running as Clio Coder version 0.3.1.`,
1356
1356
 
1357
1357
  mode_default: `Advisory: You are in default mode. Edits within the workspace are permitted. You have access to active inspection, modification, and execution tools. Ensure that you run tests to verify compilation.`,
1358
1358
  mode_advise: `Advisory: You are in advise mode. You may NOT edit codebase files directly, and you may NOT run execution tools (like bash). You can inspect files, write reviews, and write plans. Output an advisory markdown report as your final step.`,