@haniffalab/cherita-react 1.4.1 → 1.4.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +1 -1
- package/dist/cjs/components/controls/Controls.js +38 -30
- package/dist/cjs/components/dotplot/Dotplot.js +67 -69
- package/dist/cjs/components/dotplot/DotplotControls.js +103 -83
- package/dist/cjs/components/full-page/FullPage.js +100 -74
- package/dist/cjs/components/full-page/PlotAlert.js +45 -0
- package/dist/cjs/components/full-page/PlotTypeSelector.js +89 -44
- package/dist/cjs/components/heatmap/Heatmap.js +65 -65
- package/dist/cjs/components/heatmap/HeatmapControls.js +6 -3
- package/dist/cjs/components/icons/DotPlotIcon.js +64 -0
- package/dist/cjs/components/icons/HeatmapIcon.js +45 -0
- package/dist/cjs/components/icons/MatrixPlotIcon.1.js +57 -0
- package/dist/cjs/components/icons/MatrixPlotIcon.js +59 -0
- package/dist/cjs/components/icons/ScatterplotIcon.1.js +164 -0
- package/dist/cjs/components/icons/ScatterplotIcon.js +144 -0
- package/dist/cjs/components/icons/ViolinPlotIcon.js +42 -0
- package/dist/cjs/components/matrixplot/Matrixplot.js +65 -66
- package/dist/cjs/components/matrixplot/MatrixplotControls.js +8 -5
- package/dist/cjs/components/obs-list/ObsItem.js +258 -210
- package/dist/cjs/components/obs-list/ObsList.js +161 -133
- package/dist/cjs/components/obs-list/ObsToolbar.js +2 -3
- package/dist/cjs/components/obsm-list/ObsmList.js +53 -38
- package/dist/cjs/components/offcanvas/index.js +61 -31
- package/dist/cjs/components/pseudospatial/Pseudospatial.js +132 -76
- package/dist/cjs/components/pseudospatial/PseudospatialToolbar.js +122 -74
- package/dist/cjs/components/scatterplot/Scatterplot.js +127 -99
- package/dist/cjs/components/scatterplot/ScatterplotControls.js +45 -31
- package/dist/cjs/components/scatterplot/SpatialControls.js +140 -113
- package/dist/cjs/components/scatterplot/Toolbox.js +41 -30
- package/dist/cjs/components/search-bar/SearchBar.js +168 -121
- package/dist/cjs/components/search-bar/SearchInfo.js +76 -50
- package/dist/cjs/components/search-bar/SearchResults.js +93 -71
- package/dist/cjs/components/toolbar/Toolbar.js +46 -37
- package/dist/cjs/components/var-list/VarItem.js +115 -88
- package/dist/cjs/components/var-list/VarList.js +85 -69
- package/dist/cjs/components/var-list/VarListToolbar.js +59 -54
- package/dist/cjs/components/var-list/VarSet.js +126 -108
- package/dist/cjs/components/violin/Violin.js +109 -107
- package/dist/cjs/components/violin/ViolinControls.js +8 -5
- package/dist/cjs/constants/colorscales.js +19 -19
- package/dist/cjs/constants/constants.js +47 -47
- package/dist/cjs/context/DatasetContext.js +24 -16
- package/dist/cjs/context/FilterContext.js +11 -9
- package/dist/cjs/context/SettingsContext.js +255 -89
- package/dist/cjs/context/ZarrDataContext.js +6 -5
- package/dist/cjs/helpers/color-helper.js +2 -2
- package/dist/cjs/helpers/zarr-helper.js +3 -3
- package/dist/cjs/utils/Filter.js +16 -11
- package/dist/cjs/utils/Histogram.js +35 -33
- package/dist/cjs/utils/ImageViewer.js +11 -8
- package/dist/cjs/utils/Legend.js +37 -30
- package/dist/cjs/utils/LoadingIndicators.js +15 -13
- package/dist/cjs/utils/Resolver.js +213 -0
- package/dist/cjs/utils/Skeleton.js +10 -10
- package/dist/cjs/utils/StyledTooltip.js +44 -0
- package/dist/cjs/utils/VirtualizedList.js +34 -27
- package/dist/cjs/utils/errors.js +15 -15
- package/dist/cjs/utils/requests.js +21 -9
- package/dist/cjs/utils/search.js +4 -4
- package/dist/cjs/utils/string.js +6 -6
- package/dist/cjs/utils/zarrData.js +20 -21
- package/dist/css/cherita.css +64 -42
- package/dist/css/cherita.css.map +1 -1
- package/dist/esm/components/controls/Controls.js +43 -35
- package/dist/esm/components/dotplot/Dotplot.js +77 -78
- package/dist/esm/components/dotplot/DotplotControls.js +106 -85
- package/dist/esm/components/full-page/FullPage.js +120 -93
- package/dist/esm/components/full-page/PlotAlert.js +39 -0
- package/dist/esm/components/full-page/PlotTypeSelector.js +90 -45
- package/dist/esm/components/heatmap/Heatmap.js +75 -74
- package/dist/esm/components/heatmap/HeatmapControls.js +8 -4
- package/dist/esm/components/icons/DotPlotIcon.js +58 -0
- package/dist/esm/components/icons/HeatmapIcon.js +39 -0
- package/dist/esm/components/icons/MatrixPlotIcon.1.js +51 -0
- package/dist/esm/components/icons/MatrixPlotIcon.js +53 -0
- package/dist/esm/components/icons/ScatterplotIcon.1.js +158 -0
- package/dist/esm/components/icons/ScatterplotIcon.js +138 -0
- package/dist/esm/components/icons/ViolinPlotIcon.js +36 -0
- package/dist/esm/components/matrixplot/Matrixplot.js +75 -75
- package/dist/esm/components/matrixplot/MatrixplotControls.js +10 -6
- package/dist/esm/components/obs-list/ObsItem.js +273 -222
- package/dist/esm/components/obs-list/ObsList.js +176 -147
- package/dist/esm/components/obs-list/ObsToolbar.js +3 -3
- package/dist/esm/components/obsm-list/ObsmList.js +60 -44
- package/dist/esm/components/offcanvas/index.js +67 -37
- package/dist/esm/components/pseudospatial/Pseudospatial.js +145 -88
- package/dist/esm/components/pseudospatial/PseudospatialToolbar.js +127 -78
- package/dist/esm/components/scatterplot/Scatterplot.js +148 -119
- package/dist/esm/components/scatterplot/ScatterplotControls.js +50 -35
- package/dist/esm/components/scatterplot/SpatialControls.js +153 -125
- package/dist/esm/components/scatterplot/Toolbox.js +44 -32
- package/dist/esm/components/search-bar/SearchBar.js +180 -132
- package/dist/esm/components/search-bar/SearchInfo.js +86 -59
- package/dist/esm/components/search-bar/SearchResults.js +100 -77
- package/dist/esm/components/toolbar/Toolbar.js +49 -39
- package/dist/esm/components/var-list/VarItem.js +126 -98
- package/dist/esm/components/var-list/VarList.js +99 -82
- package/dist/esm/components/var-list/VarListToolbar.js +64 -58
- package/dist/esm/components/var-list/VarSet.js +134 -115
- package/dist/esm/components/violin/Violin.js +121 -118
- package/dist/esm/components/violin/ViolinControls.js +10 -6
- package/dist/esm/constants/colorscales.js +19 -19
- package/dist/esm/constants/constants.js +47 -47
- package/dist/esm/context/DatasetContext.js +31 -22
- package/dist/esm/context/FilterContext.js +11 -8
- package/dist/esm/context/SettingsContext.js +257 -90
- package/dist/esm/context/ZarrDataContext.js +8 -6
- package/dist/esm/helpers/color-helper.js +5 -5
- package/dist/esm/helpers/map-helper.js +2 -2
- package/dist/esm/helpers/zarr-helper.js +6 -6
- package/dist/esm/index.js +22 -22
- package/dist/esm/utils/Filter.js +22 -17
- package/dist/esm/utils/Histogram.js +39 -37
- package/dist/esm/utils/ImageViewer.js +12 -8
- package/dist/esm/utils/Legend.js +44 -36
- package/dist/esm/utils/LoadingIndicators.js +16 -13
- package/dist/esm/utils/Resolver.js +201 -0
- package/dist/esm/utils/Skeleton.js +11 -10
- package/dist/esm/utils/StyledTooltip.js +38 -0
- package/dist/esm/utils/VirtualizedList.js +35 -27
- package/dist/esm/utils/errors.js +15 -15
- package/dist/esm/utils/requests.js +24 -12
- package/dist/esm/utils/search.js +7 -7
- package/dist/esm/utils/string.js +7 -7
- package/dist/esm/utils/zarrData.js +27 -28
- package/package.json +18 -7
- package/scss/cherita-bootstrap.scss +2 -2
- package/scss/cherita.scss +43 -17
- package/scss/components/accordions.scss +4 -1
- package/scss/components/layouts.scss +15 -33
- package/scss/components/lists.scss +8 -4
- package/scss/components/plotly.scss +38 -26
- package/scss/components/plots.scss +14 -1
- package/dist/assets/images/plots/dotplot.svg +0 -152
- package/dist/assets/images/plots/heatmap.svg +0 -193
- package/dist/assets/images/plots/matrixplot.svg +0 -275
- package/dist/assets/images/plots/scatterplot.svg +0 -198
- package/dist/assets/images/plots/violin.svg +0 -50
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exports.CategoricalObs = CategoricalObs;
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var _jsxRuntime = require("react/jsx-runtime");
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function _interopRequireWildcard(e, t) { if ("function" == typeof WeakMap) var r = new WeakMap(), n = new WeakMap(); return (_interopRequireWildcard = function (e, t) { if (!t && e && e.__esModule) return e; var o, i, f = { __proto__: null, default: e }; if (null === e || "object" != typeof e && "function" != typeof e) return f; if (o = t ? n : r) { if (o.has(e)) return o.get(e); o.set(e, f); } for (const t in e) "default" !== t && {}.hasOwnProperty.call(e, t) && ((i = (o = Object.defineProperty) && Object.getOwnPropertyDescriptor(e, t)) && (i.get || i.set) ? o(f, t, i) : f[t] = e[t]); return f; })(e, t); }
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function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
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function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
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function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
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const filteredObsData = useFilteredObsData(obs);
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const enabledHistograms = (0, _react.useMemo)(() => showHistograms && settings.colorEncoding === _constants.COLOR_ENCODINGS.VAR, [settings.colorEncoding, showHistograms]);
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const getLabel = (0, _react.useCallback)(index => {
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const getDataAtIndex = (0, _react.useCallback)(index => {
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var _obsHistograms$fetche2;
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pct: obs.value_counts[obs.values[index]] / totalCounts * 100
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isOmitted: _lodash.default.includes(obs.omit, obs.
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label: getLabel(index),
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histogramData: enabledHistograms ? {
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data: (_obsHistograms$fetche2 = obsHistograms.fetchedData) === null || _obsHistograms$fetche2 === void 0 ? void 0 : _obsHistograms$fetche2[obs.values[index]],
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isSliced: isSliced
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};
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}, [enabledHistograms, filteredObsData === null || filteredObsData === void 0 ? void 0 : filteredObsData.pct, filteredObsData === null || filteredObsData === void 0 ? void 0 : filteredObsData.value_counts, getLabel, isSliced, obs.codes, obs.omit, obs.value_counts, obs.values, obsHistograms.fetchedData, obsHistograms.isPending, totalCounts]);
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return /*#__PURE__*/(0, _jsxRuntime.jsxs)(_jsxRuntime.Fragment, {
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children: [/*#__PURE__*/(0, _jsxRuntime.jsxs)(_reactBootstrap.ListGroup, {
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variant: "flush",
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className: "cherita-list",
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children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.ListGroup.Item, {
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className: "unstyled",
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children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_ObsToolbar.ObsToolbar, {
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item: obs,
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onToggleAllObs: toggleAll
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})
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}), /*#__PURE__*/(0, _jsxRuntime.jsx)(_VirtualizedList.VirtualizedList, {
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getDataAtIndex: getDataAtIndex,
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count: obs.values.length,
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ItemComponent: CategoricalItem,
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totalCounts: totalCounts,
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min: min,
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max: max,
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onChange: toggleObs,
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showColor: false,
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estimateSize: i =>
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// rough attempt to determine size based on label length
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// estimate size of 68 pixels if label is long (>=20 chars if enabledHistograms, >=30 otherwise), else 42
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// TODO: consider isSliced as count badge will be longer ?
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getLabel(i).length >= (enabledHistograms ? 20 : 30) ? 68 : 42
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})]
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}), /*#__PURE__*/(0, _jsxRuntime.jsx)(ObsContinuousStats, {
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obs: obs
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})]
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});
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}
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