@haniffalab/cherita-react 1.3.0-dev.2025-06-06.f1eddad0 → 1.3.1

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Files changed (138) hide show
  1. package/README.md +1 -1
  2. package/dist/cjs/components/controls/Controls.js +38 -30
  3. package/dist/cjs/components/dotplot/Dotplot.js +67 -69
  4. package/dist/cjs/components/dotplot/DotplotControls.js +103 -83
  5. package/dist/cjs/components/full-page/FullPage.js +99 -105
  6. package/dist/cjs/components/full-page/PlotAlert.js +45 -0
  7. package/dist/cjs/components/full-page/PlotTypeSelector.js +89 -44
  8. package/dist/cjs/components/heatmap/Heatmap.js +65 -65
  9. package/dist/cjs/components/heatmap/HeatmapControls.js +6 -3
  10. package/dist/cjs/components/icons/DotPlotIcon.js +64 -0
  11. package/dist/cjs/components/icons/HeatmapIcon.js +45 -0
  12. package/dist/cjs/components/icons/MatrixPlotIcon.1.js +57 -0
  13. package/dist/cjs/components/icons/MatrixPlotIcon.js +59 -0
  14. package/dist/cjs/components/icons/ScatterplotIcon.1.js +164 -0
  15. package/dist/cjs/components/icons/ScatterplotIcon.js +144 -0
  16. package/dist/cjs/components/icons/ViolinPlotIcon.js +42 -0
  17. package/dist/cjs/components/matrixplot/Matrixplot.js +65 -66
  18. package/dist/cjs/components/matrixplot/MatrixplotControls.js +8 -5
  19. package/dist/cjs/components/obs-list/ObsItem.js +267 -205
  20. package/dist/cjs/components/obs-list/ObsList.js +161 -129
  21. package/dist/cjs/components/obs-list/ObsToolbar.js +2 -3
  22. package/dist/cjs/components/obsm-list/ObsmList.js +67 -28
  23. package/dist/cjs/components/offcanvas/index.js +62 -27
  24. package/dist/cjs/components/pseudospatial/Pseudospatial.js +132 -76
  25. package/dist/cjs/components/pseudospatial/PseudospatialToolbar.js +122 -74
  26. package/dist/cjs/components/scatterplot/Scatterplot.js +128 -100
  27. package/dist/cjs/components/scatterplot/ScatterplotControls.js +45 -31
  28. package/dist/cjs/components/scatterplot/SpatialControls.js +140 -113
  29. package/dist/cjs/components/scatterplot/Toolbox.js +41 -30
  30. package/dist/cjs/components/search-bar/SearchBar.js +176 -120
  31. package/dist/cjs/components/search-bar/SearchInfo.js +76 -50
  32. package/dist/cjs/components/search-bar/SearchResults.js +93 -71
  33. package/dist/cjs/components/toolbar/Toolbar.js +46 -37
  34. package/dist/cjs/components/var-list/VarItem.js +131 -103
  35. package/dist/cjs/components/var-list/VarList.js +85 -71
  36. package/dist/cjs/components/var-list/VarListToolbar.js +59 -54
  37. package/dist/cjs/components/var-list/VarSet.js +126 -108
  38. package/dist/cjs/components/violin/Violin.js +109 -97
  39. package/dist/cjs/components/violin/ViolinControls.js +8 -5
  40. package/dist/cjs/constants/colorscales.js +19 -19
  41. package/dist/cjs/constants/constants.js +51 -48
  42. package/dist/cjs/context/DatasetContext.js +26 -17
  43. package/dist/cjs/context/FilterContext.js +11 -9
  44. package/dist/cjs/context/SettingsContext.js +271 -88
  45. package/dist/cjs/context/ZarrDataContext.js +6 -5
  46. package/dist/cjs/helpers/color-helper.js +2 -2
  47. package/dist/cjs/helpers/zarr-helper.js +3 -3
  48. package/dist/cjs/utils/Filter.js +16 -11
  49. package/dist/cjs/utils/Histogram.js +35 -33
  50. package/dist/cjs/utils/ImageViewer.js +11 -8
  51. package/dist/cjs/utils/Legend.js +37 -30
  52. package/dist/cjs/utils/LoadingIndicators.js +15 -13
  53. package/dist/cjs/utils/Resolver.js +213 -0
  54. package/dist/cjs/utils/Skeleton.js +10 -10
  55. package/dist/cjs/utils/StyledTooltip.js +44 -0
  56. package/dist/cjs/utils/VirtualizedList.js +36 -29
  57. package/dist/cjs/utils/errors.js +15 -15
  58. package/dist/cjs/utils/requests.js +21 -9
  59. package/dist/cjs/utils/search.js +4 -4
  60. package/dist/cjs/utils/string.js +6 -6
  61. package/dist/cjs/utils/zarrData.js +20 -21
  62. package/dist/css/cherita.css +135 -65
  63. package/dist/css/cherita.css.map +1 -1
  64. package/dist/esm/components/controls/Controls.js +43 -35
  65. package/dist/esm/components/dotplot/Dotplot.js +77 -78
  66. package/dist/esm/components/dotplot/DotplotControls.js +106 -85
  67. package/dist/esm/components/full-page/FullPage.js +119 -124
  68. package/dist/esm/components/full-page/PlotAlert.js +39 -0
  69. package/dist/esm/components/full-page/PlotTypeSelector.js +90 -45
  70. package/dist/esm/components/heatmap/Heatmap.js +75 -74
  71. package/dist/esm/components/heatmap/HeatmapControls.js +8 -4
  72. package/dist/esm/components/icons/DotPlotIcon.js +58 -0
  73. package/dist/esm/components/icons/HeatmapIcon.js +39 -0
  74. package/dist/esm/components/icons/MatrixPlotIcon.1.js +51 -0
  75. package/dist/esm/components/icons/MatrixPlotIcon.js +53 -0
  76. package/dist/esm/components/icons/ScatterplotIcon.1.js +158 -0
  77. package/dist/esm/components/icons/ScatterplotIcon.js +138 -0
  78. package/dist/esm/components/icons/ViolinPlotIcon.js +36 -0
  79. package/dist/esm/components/matrixplot/Matrixplot.js +75 -75
  80. package/dist/esm/components/matrixplot/MatrixplotControls.js +10 -6
  81. package/dist/esm/components/obs-list/ObsItem.js +282 -217
  82. package/dist/esm/components/obs-list/ObsList.js +176 -143
  83. package/dist/esm/components/obs-list/ObsToolbar.js +3 -3
  84. package/dist/esm/components/obsm-list/ObsmList.js +71 -32
  85. package/dist/esm/components/offcanvas/index.js +68 -33
  86. package/dist/esm/components/pseudospatial/Pseudospatial.js +145 -88
  87. package/dist/esm/components/pseudospatial/PseudospatialToolbar.js +127 -78
  88. package/dist/esm/components/scatterplot/Scatterplot.js +149 -120
  89. package/dist/esm/components/scatterplot/ScatterplotControls.js +50 -35
  90. package/dist/esm/components/scatterplot/SpatialControls.js +153 -125
  91. package/dist/esm/components/scatterplot/Toolbox.js +44 -32
  92. package/dist/esm/components/search-bar/SearchBar.js +187 -130
  93. package/dist/esm/components/search-bar/SearchInfo.js +86 -59
  94. package/dist/esm/components/search-bar/SearchResults.js +100 -77
  95. package/dist/esm/components/toolbar/Toolbar.js +49 -39
  96. package/dist/esm/components/var-list/VarItem.js +142 -113
  97. package/dist/esm/components/var-list/VarList.js +99 -84
  98. package/dist/esm/components/var-list/VarListToolbar.js +64 -58
  99. package/dist/esm/components/var-list/VarSet.js +134 -115
  100. package/dist/esm/components/violin/Violin.js +121 -108
  101. package/dist/esm/components/violin/ViolinControls.js +10 -6
  102. package/dist/esm/constants/colorscales.js +19 -19
  103. package/dist/esm/constants/constants.js +50 -47
  104. package/dist/esm/context/DatasetContext.js +33 -23
  105. package/dist/esm/context/FilterContext.js +11 -8
  106. package/dist/esm/context/SettingsContext.js +273 -89
  107. package/dist/esm/context/ZarrDataContext.js +8 -6
  108. package/dist/esm/helpers/color-helper.js +5 -5
  109. package/dist/esm/helpers/map-helper.js +2 -2
  110. package/dist/esm/helpers/zarr-helper.js +6 -6
  111. package/dist/esm/index.js +22 -22
  112. package/dist/esm/utils/Filter.js +22 -17
  113. package/dist/esm/utils/Histogram.js +39 -37
  114. package/dist/esm/utils/ImageViewer.js +12 -8
  115. package/dist/esm/utils/Legend.js +44 -36
  116. package/dist/esm/utils/LoadingIndicators.js +16 -13
  117. package/dist/esm/utils/Resolver.js +201 -0
  118. package/dist/esm/utils/Skeleton.js +11 -10
  119. package/dist/esm/utils/StyledTooltip.js +38 -0
  120. package/dist/esm/utils/VirtualizedList.js +37 -29
  121. package/dist/esm/utils/errors.js +15 -15
  122. package/dist/esm/utils/requests.js +24 -12
  123. package/dist/esm/utils/search.js +7 -7
  124. package/dist/esm/utils/string.js +7 -7
  125. package/dist/esm/utils/zarrData.js +27 -28
  126. package/package.json +21 -10
  127. package/scss/cherita-bootstrap.scss +2 -2
  128. package/scss/cherita.scss +65 -16
  129. package/scss/components/accordions.scss +15 -2
  130. package/scss/components/layouts.scss +68 -50
  131. package/scss/components/lists.scss +16 -5
  132. package/scss/components/plotly.scss +38 -26
  133. package/scss/components/plots.scss +14 -1
  134. package/dist/assets/images/plots/dotplot.svg +0 -152
  135. package/dist/assets/images/plots/heatmap.svg +0 -193
  136. package/dist/assets/images/plots/matrixplot.svg +0 -275
  137. package/dist/assets/images/plots/scatterplot.svg +0 -198
  138. package/dist/assets/images/plots/violin.svg +0 -50
@@ -4,79 +4,57 @@ Object.defineProperty(exports, "__esModule", {
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  value: true
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  });
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  exports.PseudospatialToolbar = PseudospatialToolbar;
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- var _react = _interopRequireWildcard(require("react"));
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+ var _react = require("react");
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+ var _material = require("@mui/material");
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  var _lodash = _interopRequireDefault(require("lodash"));
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  var _reactBootstrap = require("react-bootstrap");
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  var _constants = require("../../constants/constants");
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  var _DatasetContext = require("../../context/DatasetContext");
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  var _SettingsContext = require("../../context/SettingsContext");
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- var _requests = require("../../utils/requests");
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+ var _jsxRuntime = require("react/jsx-runtime");
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  function _interopRequireDefault(e) { return e && e.__esModule ? e : { default: e }; }
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- function _interopRequireWildcard(e, t) { if ("function" == typeof WeakMap) var r = new WeakMap(), n = new WeakMap(); return (_interopRequireWildcard = function (e, t) { if (!t && e && e.__esModule) return e; var o, i, f = { __proto__: null, default: e }; if (null === e || "object" != typeof e && "function" != typeof e) return f; if (o = t ? n : r) { if (o.has(e)) return o.get(e); o.set(e, f); } for (const t in e) "default" !== t && {}.hasOwnProperty.call(e, t) && ((i = (o = Object.defineProperty) && Object.getOwnPropertyDescriptor(e, t)) && (i.get || i.set) ? o(f, t, i) : f[t] = e[t]); return f; })(e, t); }
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- function ownKeys(e, r) { var t = Object.keys(e); if (Object.getOwnPropertySymbols) { var o = Object.getOwnPropertySymbols(e); r && (o = o.filter(function (r) { return Object.getOwnPropertyDescriptor(e, r).enumerable; })), t.push.apply(t, o); } return t; }
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- function _objectSpread(e) { for (var r = 1; r < arguments.length; r++) { var t = null != arguments[r] ? arguments[r] : {}; r % 2 ? ownKeys(Object(t), !0).forEach(function (r) { _defineProperty(e, r, t[r]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(e, Object.getOwnPropertyDescriptors(t)) : ownKeys(Object(t)).forEach(function (r) { Object.defineProperty(e, r, Object.getOwnPropertyDescriptor(t, r)); }); } return e; }
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- function _defineProperty(e, r, t) { return (r = _toPropertyKey(r)) in e ? Object.defineProperty(e, r, { value: t, enumerable: !0, configurable: !0, writable: !0 }) : e[r] = t, e; }
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- function _toPropertyKey(t) { var i = _toPrimitive(t, "string"); return "symbol" == typeof i ? i : i + ""; }
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- function _toPrimitive(t, r) { if ("object" != typeof t || !t) return t; var e = t[Symbol.toPrimitive]; if (void 0 !== e) { var i = e.call(t, r || "default"); if ("object" != typeof i) return i; throw new TypeError("@@toPrimitive must return a primitive value."); } return ("string" === r ? String : Number)(t); }
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  function CategoricalMode() {
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  const settings = (0, _SettingsContext.useSettings)();
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  const dispatch = (0, _SettingsContext.useSettingsDispatch)();
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- const modeList = _lodash.default.map(_constants.PSEUDOSPATIAL_CATEGORICAL_MODES, (m, key) => /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.Item, {
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- key: key,
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+ const modeList = _lodash.default.map(_constants.PSEUDOSPATIAL_CATEGORICAL_MODES, (m, key) => /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Dropdown.Item, {
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  active: settings.pseudospatial.categoricalMode === m,
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  onClick: () => {
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  dispatch({
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- type: "set.pseudospatial.categoricalMode",
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+ type: 'set.pseudospatial.categoricalMode',
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  categoricalMode: m.value
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  });
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- }
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- }, _lodash.default.capitalize(m.name)));
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+ },
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+ children: _lodash.default.capitalize(m.name)
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+ }, key));
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  const mode = _lodash.default.find(_constants.PSEUDOSPATIAL_CATEGORICAL_MODES, {
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  value: settings.pseudospatial.categoricalMode
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  });
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- return /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.Toggle, {
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- variant: "light"
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- }, _lodash.default.capitalize(mode.name)), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.Menu, null, modeList));
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+ return /*#__PURE__*/(0, _jsxRuntime.jsxs)(_reactBootstrap.Dropdown, {
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+ children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Dropdown.Toggle, {
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+ variant: "light",
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+ children: _lodash.default.capitalize(mode.name)
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+ }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Dropdown.Menu, {
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+ children: modeList
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+ })]
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+ });
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  }
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  function MaskSet() {
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  var _settings$pseudospati5, _settings$pseudospati6, _maskSets$settings$ps2, _settings$pseudospati7, _settings$pseudospati8, _maskSets$settings$ps3, _settings$pseudospati9;
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- const ENDPOINT = "masks";
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- const dataset = (0, _DatasetContext.useDataset)();
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  const settings = (0, _SettingsContext.useSettings)();
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  const dispatch = (0, _SettingsContext.useSettingsDispatch)();
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- const [maskSets, setMaskSets] = (0, _react.useState)(null);
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- const [params, setParams] = (0, _react.useState)({
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- url: dataset.url
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- });
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- (0, _react.useEffect)(() => {
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- setParams(p => {
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- return _objectSpread(_objectSpread({}, p), {}, {
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- url: dataset.url
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- });
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- });
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- }, [dataset.url]);
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  const {
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- fetchedData,
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- isPending,
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- serverError
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- } = (0, _requests.useFetch)(ENDPOINT, params, {
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- refetchOnMount: false
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- });
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- (0, _react.useEffect)(() => {
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- if (!isPending && !serverError) {
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- setMaskSets(fetchedData);
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- }
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- }, [fetchedData, isPending, serverError]);
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- const maskSetList = _lodash.default.map(maskSets, (ms, key) => /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.Item, {
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- key: key,
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+ pseudospatial: maskSets
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+ } = settings.data;
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+ const maskSetList = _lodash.default.map(maskSets, (ms, key) => /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Dropdown.Item, {
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  active: settings.pseudospatial.maskSet === key,
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  onClick: () => {
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  dispatch({
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- type: "set.pseudospatial.maskSet",
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+ type: 'set.pseudospatial.maskSet',
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  maskSet: key
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  });
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- }
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- }, _lodash.default.capitalize(key)));
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+ },
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+ children: _lodash.default.capitalize(key)
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+ }, key));
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  const handleMaskChange = mask => {
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  var _settings$pseudospati, _settings$pseudospati2;
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  let newMasks = settings.pseudospatial.maskValues || (maskSets === null || maskSets === void 0 ? void 0 : maskSets[(_settings$pseudospati = settings.pseudospatial) === null || _settings$pseudospati === void 0 ? void 0 : _settings$pseudospati.maskSet]);
@@ -85,7 +63,7 @@ function MaskSet() {
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  newMasks = null;
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  }
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  dispatch({
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- type: "set.pseudospatial.maskValues",
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+ type: 'set.pseudospatial.maskValues',
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  maskValues: newMasks
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  });
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  };
@@ -93,46 +71,116 @@ function MaskSet() {
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  var _settings$pseudospati3, _maskSets$settings$ps, _settings$pseudospati4;
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  if (!settings.pseudospatial.maskValues || ((_settings$pseudospati3 = settings.pseudospatial.maskValues) === null || _settings$pseudospati3 === void 0 ? void 0 : _settings$pseudospati3.length) === (maskSets === null || maskSets === void 0 || (_maskSets$settings$ps = maskSets[(_settings$pseudospati4 = settings.pseudospatial) === null || _settings$pseudospati4 === void 0 ? void 0 : _settings$pseudospati4.maskSet]) === null || _maskSets$settings$ps === void 0 ? void 0 : _maskSets$settings$ps.length)) {
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  dispatch({
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- type: "set.pseudospatial.maskValues",
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+ type: 'set.pseudospatial.maskValues',
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  maskValues: []
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  });
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  } else {
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  dispatch({
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- type: "set.pseudospatial.maskValues",
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+ type: 'set.pseudospatial.maskValues',
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  maskValues: null
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  });
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  }
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  };
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- const masksList = _lodash.default.map(maskSets === null || maskSets === void 0 ? void 0 : maskSets[(_settings$pseudospati5 = settings.pseudospatial) === null || _settings$pseudospati5 === void 0 ? void 0 : _settings$pseudospati5.maskSet], mask => /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.ItemText, {
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- key: mask
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- }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Form.Check, {
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- type: "checkbox",
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- label: mask,
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- checked: !settings.pseudospatial.maskValues || settings.pseudospatial.maskValues.includes(mask),
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- onChange: () => handleMaskChange(mask)
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- })));
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- const nMasks = settings.pseudospatial.maskValues ? (_settings$pseudospati6 = settings.pseudospatial.maskValues) === null || _settings$pseudospati6 === void 0 ? void 0 : _settings$pseudospati6.length : (maskSets === null || maskSets === void 0 || (_maskSets$settings$ps2 = maskSets[(_settings$pseudospati7 = settings.pseudospatial) === null || _settings$pseudospati7 === void 0 ? void 0 : _settings$pseudospati7.maskSet]) === null || _maskSets$settings$ps2 === void 0 ? void 0 : _maskSets$settings$ps2.length) || "No";
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+ const masksList = _lodash.default.map(maskSets === null || maskSets === void 0 ? void 0 : maskSets[(_settings$pseudospati5 = settings.pseudospatial) === null || _settings$pseudospati5 === void 0 ? void 0 : _settings$pseudospati5.maskSet], mask => /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Dropdown.ItemText, {
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+ children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Form.Check, {
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+ type: "checkbox",
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+ label: mask,
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+ checked: !settings.pseudospatial.maskValues || settings.pseudospatial.maskValues.includes(mask),
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+ onChange: () => handleMaskChange(mask)
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+ })
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+ }, mask));
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+ const nMasks = settings.pseudospatial.maskValues ? (_settings$pseudospati6 = settings.pseudospatial.maskValues) === null || _settings$pseudospati6 === void 0 ? void 0 : _settings$pseudospati6.length : (maskSets === null || maskSets === void 0 || (_maskSets$settings$ps2 = maskSets[(_settings$pseudospati7 = settings.pseudospatial) === null || _settings$pseudospati7 === void 0 ? void 0 : _settings$pseudospati7.maskSet]) === null || _maskSets$settings$ps2 === void 0 ? void 0 : _maskSets$settings$ps2.length) || 'No';
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  const toggleAllChecked = !settings.pseudospatial.maskValues || ((_settings$pseudospati8 = settings.pseudospatial.maskValues) === null || _settings$pseudospati8 === void 0 ? void 0 : _settings$pseudospati8.length) === (maskSets === null || maskSets === void 0 || (_maskSets$settings$ps3 = maskSets[(_settings$pseudospati9 = settings.pseudospatial) === null || _settings$pseudospati9 === void 0 ? void 0 : _settings$pseudospati9.maskSet]) === null || _maskSets$settings$ps3 === void 0 ? void 0 : _maskSets$settings$ps3.length);
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- return /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.Toggle, {
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- variant: "light"
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- }, _lodash.default.capitalize(settings.pseudospatial.maskSet || "Select a mask set")), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.Menu, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.Header, null, "Mask set"), maskSetList)), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.Toggle, {
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- variant: "light"
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- }, nMasks, " masks selected"), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.Menu, null, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.Header, null, "Masks"), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Dropdown.ItemText, {
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- key: "toggle-all"
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- }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.Form.Check, {
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- type: "checkbox",
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- label: "Toggle all",
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- checked: toggleAllChecked,
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- onChange: toggleMasks
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- })), masksList)));
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+ return /*#__PURE__*/(0, _jsxRuntime.jsxs)(_jsxRuntime.Fragment, {
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+ children: [/*#__PURE__*/(0, _jsxRuntime.jsxs)(_reactBootstrap.Dropdown, {
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+ children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Dropdown.Toggle, {
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+ variant: "light",
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+ children: _lodash.default.capitalize(settings.pseudospatial.maskSet || 'Select a mask set')
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+ }), /*#__PURE__*/(0, _jsxRuntime.jsxs)(_reactBootstrap.Dropdown.Menu, {
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+ children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Dropdown.Header, {
101
+ children: "Mask set"
102
+ }), maskSetList]
103
+ })]
104
+ }), /*#__PURE__*/(0, _jsxRuntime.jsxs)(_reactBootstrap.Dropdown, {
105
+ children: [/*#__PURE__*/(0, _jsxRuntime.jsxs)(_reactBootstrap.Dropdown.Toggle, {
106
+ variant: "light",
107
+ children: [nMasks, " masks selected"]
108
+ }), /*#__PURE__*/(0, _jsxRuntime.jsxs)(_reactBootstrap.Dropdown.Menu, {
109
+ children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Dropdown.Header, {
110
+ children: "Masks"
111
+ }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Dropdown.ItemText, {
112
+ children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Form.Check, {
113
+ type: "checkbox",
114
+ label: "Toggle all",
115
+ checked: toggleAllChecked,
116
+ onChange: toggleMasks
117
+ })
118
+ }, "toggle-all"), masksList]
119
+ })]
120
+ })]
121
+ });
122
+ }
123
+ function OpacitySlider(_ref) {
124
+ let {
125
+ opacity,
126
+ setOpacity
127
+ } = _ref;
128
+ const [sliderValue, setSliderValue] = (0, _react.useState)(opacity);
129
+ return /*#__PURE__*/(0, _jsxRuntime.jsxs)(_material.Box, {
130
+ className: "w-100",
131
+ children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_material.Typography, {
132
+ id: "opacity-range",
133
+ gutterBottom: true,
134
+ children: "Reference image opacity"
135
+ }), /*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
136
+ className: "px-4",
137
+ children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_material.Slider, {
138
+ "aria-labelledby": "opacity-range",
139
+ min: 0,
140
+ max: 1,
141
+ step: 0.05,
142
+ value: sliderValue,
143
+ onChange: (_e, value) => setSliderValue(value),
144
+ onChangeCommitted: (_e, value) => setOpacity(value),
145
+ valueLabelDisplay: "auto",
146
+ getAriaValueText: value => "".concat(value * 100, "%"),
147
+ valueLabelFormat: value => "".concat((value * 100).toFixed(0), "%"),
148
+ marks: [{
149
+ value: 0,
150
+ label: '0%'
151
+ }, {
152
+ value: 1,
153
+ label: '100%'
154
+ }]
155
+ })
156
+ })]
157
+ });
128
158
  }
129
159
 
130
160
  // @TODO: add colormap, colorbar slider
131
- function PseudospatialToolbar(_ref) {
161
+ function PseudospatialToolbar(_ref2) {
132
162
  let {
133
163
  plotType
134
- } = _ref;
135
- return /*#__PURE__*/_react.default.createElement("div", {
136
- className: "cherita-pseudospatial-toolbar"
137
- }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.ButtonGroup, null, /*#__PURE__*/_react.default.createElement(MaskSet, null)), /*#__PURE__*/_react.default.createElement(_reactBootstrap.ButtonGroup, null, plotType === _constants.PSEUDOSPATIAL_PLOT_TYPES.CATEGORICAL && /*#__PURE__*/_react.default.createElement(CategoricalMode, null)));
164
+ } = _ref2;
165
+ const {
166
+ imageUrl
167
+ } = (0, _DatasetContext.useDataset)();
168
+ const settings = (0, _SettingsContext.useSettings)();
169
+ const dispatch = (0, _SettingsContext.useSettingsDispatch)();
170
+ return /*#__PURE__*/(0, _jsxRuntime.jsxs)("div", {
171
+ className: "cherita-pseudospatial-toolbar",
172
+ children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.ButtonGroup, {
173
+ children: /*#__PURE__*/(0, _jsxRuntime.jsx)(MaskSet, {})
174
+ }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.ButtonGroup, {
175
+ children: plotType === _constants.PSEUDOSPATIAL_PLOT_TYPES.CATEGORICAL && /*#__PURE__*/(0, _jsxRuntime.jsx)(CategoricalMode, {})
176
+ }), imageUrl && /*#__PURE__*/(0, _jsxRuntime.jsx)(OpacitySlider, {
177
+ opacity: settings.pseudospatial.refImg.opacity,
178
+ setOpacity: opacity => {
179
+ dispatch({
180
+ type: 'set.pseudospatial.refImg.opacity',
181
+ opacity: opacity
182
+ });
183
+ }
184
+ })]
185
+ });
138
186
  }