@haniffalab/cherita-react 1.3.0-dev.2025-06-06.f1eddad0 → 1.3.1

package/dist/cjs/components/var-list/VarListToolbar.js

@@ -4,17 +4,17 @@ Object.defineProperty(exports, "__esModule", {
   value: true
 });
 exports.VarListToolbar = VarListToolbar;
-var _react = _interopRequireWildcard(require("react"));
+var _react = require("react");
 var _freeSolidSvgIcons = require("@fortawesome/free-solid-svg-icons");
 var _reactFontawesome = require("@fortawesome/react-fontawesome");
 var _reactBootstrap = require("react-bootstrap");
 var _constants = require("../../constants/constants");
 var _SettingsContext = require("../../context/SettingsContext");
-function _interopRequireWildcard(e, t) { if ("function" == typeof WeakMap) var r = new WeakMap(), n = new WeakMap(); return (_interopRequireWildcard = function (e, t) { if (!t && e && e.__esModule) return e; var o, i, f = { __proto__: null, default: e }; if (null === e || "object" != typeof e && "function" != typeof e) return f; if (o = t ? n : r) { if (o.has(e)) return o.get(e); o.set(e, f); } for (const t in e) "default" !== t && {}.hasOwnProperty.call(e, t) && ((i = (o = Object.defineProperty) && Object.getOwnPropertyDescriptor(e, t)) && (i.get || i.set) ? o(f, t, i) : f[t] = e[t]); return f; })(e, t); }
+var _jsxRuntime = require("react/jsx-runtime");
 // @TODO: set option for "var" and "disease"
 function VarListToolbar(_ref) {
   let {
-    varType = "var"
+    varType = 'var'
   } = _ref;
   const settings = (0, _SettingsContext.useSettings)();
   const dispatch = (0, _SettingsContext.useSettingsDispatch)();
@@ -25,7 +25,7 @@ function VarListToolbar(_ref) {
     if (sort !== sortValue) {
       setSort(sortValue);
       dispatch({
-        type: "set.varSort",
+        type: 'set.varSort',
         var: varType,
         sort: sortValue,
         sortOrder: sortOrder
@@ -34,60 +34,65 @@ function VarListToolbar(_ref) {
       const newSortOrder = sortOrder === _constants.VAR_SORT_ORDER.ASC ? _constants.VAR_SORT_ORDER.DESC : _constants.VAR_SORT_ORDER.ASC;
       setSortOrder(newSortOrder);
       dispatch({
-        type: "set.varSort",
+        type: 'set.varSort',
         var: varType,
         sort: sortValue,
         sortOrder: newSortOrder
       });
     }
   };
-  return /*#__PURE__*/_react.default.createElement("div", {
-    className: "d-flex justify-content-end align-items-center mb-2"
-  }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.ToggleButtonGroup, {
-    name: "sortfeatures",
-    "aria-label": "Sort features by",
-    size: "sm",
-    type: "radio"
-  }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.ToggleButton, {
-    id: _constants.VAR_SORT.NAME,
-    value: _constants.VAR_SORT.NAME,
-    "aria-label": "alphabetical",
-    title: "Sort alphabetically",
-    selected: sort === _constants.VAR_SORT.NAME,
-    onChange: () => {
-      handleSort(_constants.VAR_SORT.NAME, nameSortOrder, setNameSortOrder);
-    }
-  }, nameSortOrder === _constants.VAR_SORT_ORDER.ASC ? /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: _freeSolidSvgIcons.faArrowDownAZ
-  }) : /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: _freeSolidSvgIcons.faArrowUpZA
-  })), /*#__PURE__*/_react.default.createElement(_reactBootstrap.ToggleButton, {
-    id: _constants.VAR_SORT.MATRIX,
-    value: _constants.VAR_SORT.MATRIX,
-    "aria-label": "matrix value",
-    title: "Sort by matrix value",
-    selected: sort === _constants.VAR_SORT.MATRIX,
-    onChange: () => {
-      handleSort(_constants.VAR_SORT.MATRIX, matrixSortOrder, setMatrixSortOrder);
-    }
-  }, matrixSortOrder === _constants.VAR_SORT_ORDER.ASC ? /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: _freeSolidSvgIcons.faArrowDown19
-  }) : /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: _freeSolidSvgIcons.faArrowUp91
-  })), /*#__PURE__*/_react.default.createElement(_reactBootstrap.ToggleButton, {
-    id: "none",
-    value: "none",
-    "aria-label": "none",
-    title: "No sorting",
-    onClick: () => {
-      setSort(_constants.VAR_SORT.NONE);
-      dispatch({
-        type: "set.varSort.sort",
-        var: varType,
-        sort: _constants.VAR_SORT.NONE
-      });
-    }
-  }, /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: _freeSolidSvgIcons.faXmark
-  }))));
+  return /*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+    className: "d-flex justify-content-end align-items-center mb-2",
+    children: /*#__PURE__*/(0, _jsxRuntime.jsxs)(_reactBootstrap.ToggleButtonGroup, {
+      name: "sortfeatures",
+      "aria-label": "Sort features by",
+      size: "sm",
+      type: "radio",
+      children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.ToggleButton, {
+        id: _constants.VAR_SORT.NAME,
+        value: _constants.VAR_SORT.NAME,
+        "aria-label": "alphabetical",
+        title: "Sort alphabetically",
+        selected: sort === _constants.VAR_SORT.NAME,
+        onChange: () => {
+          handleSort(_constants.VAR_SORT.NAME, nameSortOrder, setNameSortOrder);
+        },
+        children: nameSortOrder === _constants.VAR_SORT_ORDER.ASC ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+          icon: _freeSolidSvgIcons.faArrowDownAZ
+        }) : /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+          icon: _freeSolidSvgIcons.faArrowUpZA
+        })
+      }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.ToggleButton, {
+        id: _constants.VAR_SORT.MATRIX,
+        value: _constants.VAR_SORT.MATRIX,
+        "aria-label": "matrix value",
+        title: "Sort by matrix value",
+        selected: sort === _constants.VAR_SORT.MATRIX,
+        onChange: () => {
+          handleSort(_constants.VAR_SORT.MATRIX, matrixSortOrder, setMatrixSortOrder);
+        },
+        children: matrixSortOrder === _constants.VAR_SORT_ORDER.ASC ? /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+          icon: _freeSolidSvgIcons.faArrowDown19
+        }) : /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+          icon: _freeSolidSvgIcons.faArrowUp91
+        })
+      }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.ToggleButton, {
+        id: "none",
+        value: "none",
+        "aria-label": "none",
+        title: "No sorting",
+        onClick: () => {
+          setSort(_constants.VAR_SORT.NONE);
+          dispatch({
+            type: 'set.varSort.sort',
+            var: varType,
+            sort: _constants.VAR_SORT.NONE
+          });
+        },
+        children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+          icon: _freeSolidSvgIcons.faXmark
+        })
+      })]
+    })
+  });
 }

package/dist/cjs/components/var-list/VarSet.js

@@ -4,7 +4,7 @@ Object.defineProperty(exports, "__esModule", {
   value: true
 });
 exports.VarSet = VarSet;
-var _react = _interopRequireWildcard(require("react"));
+var _react = require("react");
 var _freeSolidSvgIcons = require("@fortawesome/free-solid-svg-icons");
 var _reactFontawesome = require("@fortawesome/react-fontawesome");
 var _lodash = _interopRequireDefault(require("lodash"));
@@ -13,13 +13,12 @@ var _VarItem = require("./VarItem");
 var _constants = require("../../constants/constants");
 var _SettingsContext = require("../../context/SettingsContext");
 var _SearchBar = require("../search-bar/SearchBar");
+var _jsxRuntime = require("react/jsx-runtime");
 function _interopRequireDefault(e) { return e && e.__esModule ? e : { default: e }; }
-function _interopRequireWildcard(e, t) { if ("function" == typeof WeakMap) var r = new WeakMap(), n = new WeakMap(); return (_interopRequireWildcard = function (e, t) { if (!t && e && e.__esModule) return e; var o, i, f = { __proto__: null, default: e }; if (null === e || "object" != typeof e && "function" != typeof e) return f; if (o = t ? n : r) { if (o.has(e)) return o.get(e); o.set(e, f); } for (const t in e) "default" !== t && {}.hasOwnProperty.call(e, t) && ((i = (o = Object.defineProperty) && Object.getOwnPropertyDescriptor(e, t)) && (i.get || i.set) ? o(f, t, i) : f[t] = e[t]); return f; })(e, t); }
 // @TODO: add button to score genes and plot
-
 const addVarToSet = (dispatch, set, v) => {
   dispatch({
-    type: "add.varSet.var",
+    type: 'add.varSet.var',
     varSet: set,
     var: v
   });
@@ -35,100 +34,119 @@ function SelectionSet(_ref) {
   } = _ref;
   const [openSet, setOpenSet] = (0, _react.useState)(false);
   const [showModal, setShowModal] = (0, _react.useState)(false);
-  const [searchText, setSearchText] = (0, _react.useState)("");
+  const [searchText, setSearchText] = (0, _react.useState)('');
   const varList = set.vars.length ? _lodash.default.map(set.vars, v => {
-    return /*#__PURE__*/_react.default.createElement(_reactBootstrap.ListGroup.Item, {
-      key: v.name
-    }, /*#__PURE__*/_react.default.createElement(_VarItem.SelectionItem, {
-      item: v,
-      showSetColorEncoding: false,
-      removeVar: () => removeSetVar(v)
-    }));
-  }) : /*#__PURE__*/_react.default.createElement(_reactBootstrap.ListGroup.Item, null, /*#__PURE__*/_react.default.createElement("div", {
-    className: "text-muted"
-  }, "No features in this set"));
-  return /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, /*#__PURE__*/_react.default.createElement("div", {
-    className: "d-flex justify-content-between cursor-pointer",
-    onClick: () => {
-      setOpenSet(o => !o);
-    }
-  }, /*#__PURE__*/_react.default.createElement("div", {
-    className: "d-flex justify-content-between align-items-center w-100"
-  }, /*#__PURE__*/_react.default.createElement("div", {
-    className: "ellipsis-text",
-    title: set.name
-  }, set.name), /*#__PURE__*/_react.default.createElement("div", {
-    className: "d-flex align-items-center gap-1"
-  }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.OverlayTrigger, {
-    placement: "top",
-    overlay: /*#__PURE__*/_react.default.createElement(_reactBootstrap.Tooltip, null, "This set represents the mean value of its features")
-  }, /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: _freeSolidSvgIcons.faCircleInfo
-  })), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Button, {
-    type: "button",
-    variant: "outline-primary",
-    className: "m-0 p-0 px-1",
-    disabled: !set.vars.length,
-    title: "Open set"
-  }, /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: openSet ? _freeSolidSvgIcons.faChevronUp : _freeSolidSvgIcons.faChevronDown
-  })), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Button, {
-    type: "button",
-    variant: "outline-primary",
-    className: "m-0 p-0 px-1",
-    onClick: e => {
-      e.stopPropagation();
-      setShowModal(true);
-    },
-    title: "Add to set"
-  }, /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: _freeSolidSvgIcons.faPlus
-  })), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Button, {
-    type: "button",
-    variant: isActive ? "primary" : "outline-primary",
-    className: "m-0 p-0 px-1",
-    onClick: e => {
-      e.stopPropagation();
-      selectSet();
-    },
-    disabled: !set.vars.length,
-    title: "Set as color encoding"
-  }, /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: _freeSolidSvgIcons.faDroplet
-  }), isMultiple && /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: _freeSolidSvgIcons.faPlus,
-    size: "xs",
-    className: "ps-xs-1"
-  })), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Button, {
-    type: "button",
-    className: "m-0 p-0 px-1",
-    variant: "outline-secondary",
-    title: "Remove from list",
-    onClick: e => {
-      e.stopPropagation();
-      removeSet();
-    }
-  }, /*#__PURE__*/_react.default.createElement(_reactFontawesome.FontAwesomeIcon, {
-    icon: _freeSolidSvgIcons.faTrash
-  }))))), /*#__PURE__*/_react.default.createElement(_reactBootstrap.Collapse, {
-    in: openSet
-  }, /*#__PURE__*/_react.default.createElement("div", {
-    className: "mt-2"
-  }, /*#__PURE__*/_react.default.createElement(_reactBootstrap.ListGroup, {
-    variant: "flush",
-    className: "cherita-list var-set-list"
-  }, varList))), /*#__PURE__*/_react.default.createElement(_SearchBar.SearchModal, {
-    show: showModal,
-    handleClose: () => setShowModal(false),
-    text: searchText,
-    setText: setSearchText,
-    displayText: "features",
-    handleSelect: (d, i) => {
-      addVarToSet(d, set, i);
-    },
-    searchVar: true,
-    searchDiseases: false
-  }));
+    return /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.ListGroup.Item, {
+      children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_VarItem.SelectionItem, {
+        item: v,
+        showSetColorEncoding: false,
+        removeVar: () => removeSetVar(v)
+      })
+    }, v.name);
+  }) : /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.ListGroup.Item, {
+    children: /*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+      className: "text-muted",
+      children: "No features in this set"
+    })
+  });
+  return /*#__PURE__*/(0, _jsxRuntime.jsxs)(_jsxRuntime.Fragment, {
+    children: [/*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+      className: "d-flex justify-content-between cursor-pointer",
+      onClick: () => {
+        setOpenSet(o => !o);
+      },
+      children: /*#__PURE__*/(0, _jsxRuntime.jsxs)("div", {
+        className: "d-flex justify-content-between align-items-center w-100",
+        children: [/*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+          className: "ellipsis-text",
+          title: set.name,
+          children: set.name
+        }), /*#__PURE__*/(0, _jsxRuntime.jsxs)("div", {
+          className: "d-flex align-items-center gap-1",
+          children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.OverlayTrigger, {
+            placement: "top",
+            overlay: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Tooltip, {
+              children: "This set represents the mean value of its features"
+            }),
+            children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+              icon: _freeSolidSvgIcons.faCircleInfo
+            })
+          }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
+            type: "button",
+            variant: "outline-primary",
+            className: "m-0 p-0 px-1",
+            disabled: !set.vars.length,
+            title: "Open set",
+            children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+              icon: openSet ? _freeSolidSvgIcons.faChevronUp : _freeSolidSvgIcons.faChevronDown
+            })
+          }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
+            type: "button",
+            variant: "outline-primary",
+            className: "m-0 p-0 px-1",
+            onClick: e => {
+              e.stopPropagation();
+              setShowModal(true);
+            },
+            title: "Add to set",
+            children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+              icon: _freeSolidSvgIcons.faPlus
+            })
+          }), /*#__PURE__*/(0, _jsxRuntime.jsxs)(_reactBootstrap.Button, {
+            type: "button",
+            variant: isActive ? 'primary' : 'outline-primary',
+            className: "m-0 p-0 px-1",
+            onClick: e => {
+              e.stopPropagation();
+              selectSet();
+            },
+            disabled: !set.vars.length,
+            title: "Set as color encoding",
+            children: [/*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+              icon: _freeSolidSvgIcons.faDroplet
+            }), isMultiple && /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+              icon: _freeSolidSvgIcons.faPlus,
+              size: "xs",
+              className: "ps-xs-1"
+            })]
+          }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Button, {
+            type: "button",
+            className: "m-0 p-0 px-1",
+            variant: "outline-secondary",
+            title: "Remove from list",
+            onClick: e => {
+              e.stopPropagation();
+              removeSet();
+            },
+            children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactFontawesome.FontAwesomeIcon, {
+              icon: _freeSolidSvgIcons.faTrash
+            })
+          })]
+        })]
+      })
+    }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.Collapse, {
+      in: openSet,
+      children: /*#__PURE__*/(0, _jsxRuntime.jsx)("div", {
+        className: "mt-2",
+        children: /*#__PURE__*/(0, _jsxRuntime.jsx)(_reactBootstrap.ListGroup, {
+          variant: "flush",
+          className: "cherita-list var-set-list",
+          children: varList
+        })
+      })
+    }), /*#__PURE__*/(0, _jsxRuntime.jsx)(_SearchBar.SearchModal, {
+      show: showModal,
+      handleClose: () => setShowModal(false),
+      text: searchText,
+      setText: setSearchText,
+      displayText: 'features',
+      handleSelect: (d, i) => {
+        addVarToSet(d, set, i);
+      },
+      searchVar: true,
+      searchDiseases: false
+    })]
+  });
 }
 function VarSet(_ref2) {
   let {
@@ -141,16 +159,16 @@ function VarSet(_ref2) {
   const selectSet = () => {
     if (mode === _constants.SELECTION_MODES.SINGLE) {
       dispatch({
-        type: "select.var",
+        type: 'select.var',
         var: set
       });
       dispatch({
-        type: "set.colorEncoding",
-        value: "var"
+        type: 'set.colorEncoding',
+        value: 'var'
       });
     } else if (mode === _constants.SELECTION_MODES.MULTIPLE) {
       dispatch({
-        type: "select.multivar",
+        type: 'select.multivar',
         var: set
       });
     }
@@ -159,37 +177,37 @@ function VarSet(_ref2) {
     if (mode === _constants.SELECTION_MODES.SINGLE) {
       if (active === set.name) {
         dispatch({
-          type: "reset.var"
+          type: 'reset.var'
         });
       }
     } else if (mode === _constants.SELECTION_MODES.MULTIPLE) {
       if (active.includes(set.name)) {
         dispatch({
-          type: "deselect.multivar",
+          type: 'deselect.multivar',
           var: set
         });
       }
     }
     dispatch({
-      type: "remove.var",
+      type: 'remove.var',
       var: set
     });
   };
   const removeSetVar = v => {
     dispatch({
-      type: "remove.varSet.var",
+      type: 'remove.varSet.var',
       varSet: set,
       var: v
     });
   };
   const toggleSet = () => {
     dispatch({
-      type: "toggle.multivar",
+      type: 'toggle.multivar',
       var: set
     });
   };
   if (set && mode === _constants.SELECTION_MODES.SINGLE) {
-    return /*#__PURE__*/_react.default.createElement(SelectionSet, {
+    return /*#__PURE__*/(0, _jsxRuntime.jsx)(SelectionSet, {
       set: set,
       isActive: settings.colorEncoding === _constants.COLOR_ENCODINGS.VAR && active === set.name,
       selectSet: selectSet,
@@ -197,7 +215,7 @@ function VarSet(_ref2) {
       removeSetVar: v => removeSetVar(v)
     });
   } else if (mode === _constants.SELECTION_MODES.MULTIPLE) {
-    return /*#__PURE__*/_react.default.createElement(SelectionSet, {
+    return /*#__PURE__*/(0, _jsxRuntime.jsx)(SelectionSet, {
       set: set,
       isActive: _lodash.default.includes(active, set.name),
       selectSet: toggleSet,