@graphty/graph-io 0.3.25 → 0.3.26

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (581) hide show
  1. package/README.md +49 -414
  2. package/dist/chunks/children-CL3Cy0ez.js.map +1 -1
  3. package/dist/chunks/choose-BbJI55dx.js +56 -0
  4. package/dist/chunks/choose-BbJI55dx.js.map +1 -0
  5. package/dist/chunks/constants-BCsFsMj4.js +231 -0
  6. package/dist/chunks/constants-BCsFsMj4.js.map +1 -0
  7. package/dist/chunks/{escape-B-tkk_Cl.js → escape-D0g6NNUy.js} +382 -92
  8. package/dist/chunks/escape-D0g6NNUy.js.map +1 -0
  9. package/dist/chunks/export-BTI4yQgy.js +4333 -0
  10. package/dist/chunks/export-BTI4yQgy.js.map +1 -0
  11. package/dist/chunks/exporter-BMqk5oxW.js +3465 -0
  12. package/dist/chunks/exporter-BMqk5oxW.js.map +1 -0
  13. package/dist/chunks/{importer-eUREhBGj.js → exporter-Cra2GYcN.js} +4969 -3201
  14. package/dist/chunks/exporter-Cra2GYcN.js.map +1 -0
  15. package/dist/chunks/{exporter-BGrsWamJ.js → exporter-Dxh231ZF.js} +38 -229
  16. package/dist/chunks/exporter-Dxh231ZF.js.map +1 -0
  17. package/dist/chunks/{exporter-DIeGJXAZ.js → exporter-tne475KK.js} +22 -20
  18. package/dist/chunks/exporter-tne475KK.js.map +1 -0
  19. package/dist/chunks/importer-90YWhJoF.js +2811 -0
  20. package/dist/chunks/importer-90YWhJoF.js.map +1 -0
  21. package/dist/chunks/{importer-D_e7e7LX.js → importer-Bcl1d4xH.js} +398 -145
  22. package/dist/chunks/importer-Bcl1d4xH.js.map +1 -0
  23. package/dist/chunks/{importer-BWY2FFc5.js → importer-BfIsp1f9.js} +255 -77
  24. package/dist/chunks/importer-BfIsp1f9.js.map +1 -0
  25. package/dist/chunks/{importer-zGLo8Dg_.js → importer-C_TEA1zJ.js} +484 -157
  26. package/dist/chunks/importer-C_TEA1zJ.js.map +1 -0
  27. package/dist/chunks/{importer-DET1tg6s.js → importer-DCjOvO7U.js} +1687 -310
  28. package/dist/chunks/importer-DCjOvO7U.js.map +1 -0
  29. package/dist/chunks/{importer-vi3bSdtw.js → importer-DfVu6j59.js} +509 -76
  30. package/dist/chunks/importer-DfVu6j59.js.map +1 -0
  31. package/dist/chunks/{importer-DIrbbnAf.js → importer-Dku_VAIY.js} +585 -226
  32. package/dist/chunks/importer-Dku_VAIY.js.map +1 -0
  33. package/dist/chunks/json-elements-3tnyt5uZ.js +1225 -0
  34. package/dist/chunks/json-elements-3tnyt5uZ.js.map +1 -0
  35. package/dist/chunks/ontology-export-B9Tcf37D.js +357 -0
  36. package/dist/chunks/ontology-export-B9Tcf37D.js.map +1 -0
  37. package/dist/chunks/{records-dbRkxwaq.js → records-CQXT__mY.js} +298 -114
  38. package/dist/chunks/records-CQXT__mY.js.map +1 -0
  39. package/dist/chunks/{text-Dr0Ifpag.js → text-DmcUs5_Q.js} +29 -11
  40. package/dist/chunks/text-DmcUs5_Q.js.map +1 -0
  41. package/dist/chunks/{writer-C7flM-Ih.js → writer-DxjgHwSe.js} +19 -1
  42. package/dist/chunks/writer-DxjgHwSe.js.map +1 -0
  43. package/dist/csv.js +951 -261
  44. package/dist/csv.js.map +1 -1
  45. package/dist/cx.js +6 -3
  46. package/dist/cx2.js +2 -2
  47. package/dist/cys.js +6 -3
  48. package/dist/dot.js +1 -1
  49. package/dist/gexf.js +554 -122
  50. package/dist/gexf.js.map +1 -1
  51. package/dist/gml.js +342 -85
  52. package/dist/gml.js.map +1 -1
  53. package/dist/graph-io.js +1105 -213
  54. package/dist/graph-io.js.map +1 -1
  55. package/dist/graphml.js +3 -2
  56. package/dist/graphml.js.map +1 -1
  57. package/dist/json.js +3 -2
  58. package/dist/neo4j.js +564 -157
  59. package/dist/neo4j.js.map +1 -1
  60. package/dist/obo.js +6 -3
  61. package/dist/pajek.js +1 -1
  62. package/dist/src/children.d.ts +18 -6
  63. package/dist/src/children.d.ts.map +1 -1
  64. package/dist/src/children.js +6 -3
  65. package/dist/src/children.js.map +1 -1
  66. package/dist/src/common/attributes.d.ts +29 -11
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  68. package/dist/src/common/attributes.js +25 -7
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  70. package/dist/src/common/cell-budget.d.ts +9 -2
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  72. package/dist/src/common/cell-budget.js +11 -3
  73. package/dist/src/common/cell-budget.js.map +1 -1
  74. package/dist/src/common/choose.d.ts +19 -0
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  76. package/dist/src/common/choose.js +72 -0
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  78. package/dist/src/common/codes.d.ts +456 -66
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  80. package/dist/src/common/codes.js +458 -66
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  82. package/dist/src/common/compare.d.ts +81 -0
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  84. package/dist/src/common/compare.js +394 -0
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  86. package/dist/src/common/cx-export.d.ts +123 -0
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  88. package/dist/src/common/cx-export.js +334 -0
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  90. package/dist/src/common/declared-types.d.ts +22 -2
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  94. package/dist/src/common/direction.d.ts +74 -50
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  96. package/dist/src/common/direction.js +47 -27
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  98. package/dist/src/common/escape.d.ts +21 -9
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  100. package/dist/src/common/escape.js +33 -17
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  102. package/dist/src/common/export.d.ts +144 -32
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  104. package/dist/src/common/export.js +216 -42
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  106. package/dist/src/common/format.d.ts +23 -1
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  108. package/dist/src/common/format.js +26 -1
  109. package/dist/src/common/format.js.map +1 -1
  110. package/dist/src/common/ids.d.ts +9 -2
  111. package/dist/src/common/ids.d.ts.map +1 -1
  112. package/dist/src/common/ids.js +6 -2
  113. package/dist/src/common/ids.js.map +1 -1
  114. package/dist/src/common/input.d.ts +122 -28
  115. package/dist/src/common/input.d.ts.map +1 -1
  116. package/dist/src/common/input.js +890 -124
  117. package/dist/src/common/input.js.map +1 -1
  118. package/dist/src/common/json-elements.d.ts +144 -20
  119. package/dist/src/common/json-elements.d.ts.map +1 -1
  120. package/dist/src/common/json-elements.js +868 -188
  121. package/dist/src/common/json-elements.js.map +1 -1
  122. package/dist/src/common/line-format.d.ts +90 -0
  123. package/dist/src/common/line-format.d.ts.map +1 -0
  124. package/dist/src/common/line-format.js +185 -0
  125. package/dist/src/common/line-format.js.map +1 -0
  126. package/dist/src/common/lists.d.ts +6 -1
  127. package/dist/src/common/lists.d.ts.map +1 -1
  128. package/dist/src/common/lists.js +2 -0
  129. package/dist/src/common/lists.js.map +1 -1
  130. package/dist/src/common/ontology-export.d.ts +167 -0
  131. package/dist/src/common/ontology-export.d.ts.map +1 -0
  132. package/dist/src/common/ontology-export.js +359 -0
  133. package/dist/src/common/ontology-export.js.map +1 -0
  134. package/dist/src/common/ontology.d.ts +25 -3
  135. package/dist/src/common/ontology.d.ts.map +1 -1
  136. package/dist/src/common/ontology.js +30 -9
  137. package/dist/src/common/ontology.js.map +1 -1
  138. package/dist/src/common/options.d.ts +62 -12
  139. package/dist/src/common/options.d.ts.map +1 -1
  140. package/dist/src/common/options.js +89 -11
  141. package/dist/src/common/options.js.map +1 -1
  142. package/dist/src/common/plural.d.ts +31 -0
  143. package/dist/src/common/plural.d.ts.map +1 -0
  144. package/dist/src/common/plural.js +46 -0
  145. package/dist/src/common/plural.js.map +1 -0
  146. package/dist/src/common/report.d.ts +72 -14
  147. package/dist/src/common/report.d.ts.map +1 -1
  148. package/dist/src/common/report.js +146 -22
  149. package/dist/src/common/report.js.map +1 -1
  150. package/dist/src/common/temporal.d.ts +22 -5
  151. package/dist/src/common/temporal.d.ts.map +1 -1
  152. package/dist/src/common/temporal.js +13 -2
  153. package/dist/src/common/temporal.js.map +1 -1
  154. package/dist/src/common/text.d.ts +39 -23
  155. package/dist/src/common/text.d.ts.map +1 -1
  156. package/dist/src/common/text.js +51 -21
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  158. package/dist/src/common/weights.d.ts +37 -4
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  160. package/dist/src/common/weights.js +61 -2
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  162. package/dist/src/common/writer.d.ts +19 -3
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  164. package/dist/src/common/writer.js +30 -2
  165. package/dist/src/common/writer.js.map +1 -1
  166. package/dist/src/common/xml.d.ts +125 -9
  167. package/dist/src/common/xml.d.ts.map +1 -1
  168. package/dist/src/common/xml.js +400 -83
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  170. package/dist/src/common/zip.d.ts +44 -4
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  172. package/dist/src/common/zip.js +134 -5
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  174. package/dist/src/formats/csv/exporter.d.ts +80 -24
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  178. package/dist/src/formats/csv/header.d.ts +38 -9
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  190. package/dist/src/formats/csv/records.d.ts +95 -10
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@@ -1,12 +1,16 @@
1
1
  /**
2
- * The `@graphty/graph-io/neo4j` subpath: the Neo4j importer and exporter with their option types
3
- * (design section 8.2), the names of the reserved columns and the issue and loss-note codes
2
+ * The `@graphty/graph-io/neo4j` subpath: the Neo4j importer and exporter with their option types,
3
+ * the names of the reserved columns and the issue and loss-note codes
4
4
  * grouped in two tables.
5
+ * @module @graphty/graph-io/neo4j
5
6
  */
6
7
 
7
8
  import {
8
9
  COLUMN_RENAMED_CODE,
10
+ COLUMN_TYPE_CODE,
11
+ ELEMENT_ISSUE,
9
12
  ENCODING_FALLBACK_CODE,
13
+ INPUT_ISSUE,
10
14
  INVALID_ENCODING_CODE,
11
15
  INVALID_UTF8_CODE,
12
16
  MUTUAL_EXPANDED_CODE,
@@ -31,6 +35,7 @@ import {
31
35
  } from "./exporter.js";
32
36
  import {
33
37
  COLUMN_COUNT_CODE,
38
+ DANGLING_REFERENCE_CODE,
34
39
  DUPLICATE_NODE_CODE,
35
40
  ENDPOINT_SPACE_CODE,
36
41
  HEADER_CODE,
@@ -40,10 +45,18 @@ import {
40
45
  IGNORED_COLUMNS_LOSS,
41
46
  MISSING_ENDPOINT_CODE,
42
47
  MISSING_ID_CODE,
48
+ MISSING_TYPE_CODE,
43
49
  ROLE_TAKEN_CODE,
50
+ SECTION_KIND_CODE,
44
51
  } from "./importer.js";
45
52
 
46
- export { NEO4J_CAPABILITIES, neo4jExporter, type Neo4jExportOptions } from "./exporter.js";
53
+ export {
54
+ exportNeo4jFiles,
55
+ NEO4J_CAPABILITIES,
56
+ neo4jExporter,
57
+ type Neo4jExportOptions,
58
+ type Neo4jFile,
59
+ } from "./exporter.js";
47
60
  export {
48
61
  ID_SPACE_COLUMN,
49
62
  LABELS_COLUMN,
@@ -54,24 +67,38 @@ export {
54
67
  } from "./importer.js";
55
68
 
56
69
  /**
57
- * The issue codes the Neo4j importer records (design section 8.6), by name: the codes shared with
58
- * the other importers (src/common/codes.ts, the CSV record reader) and the Neo4j-specific ones.
70
+ * The issue codes the Neo4j importer records, by name: the codes shared with
71
+ * the other importers and the Neo4j-specific ones.
59
72
  * A key is the code without its severity and format prefixes.
73
+ * @category Built-in formats
60
74
  */
61
75
  export const NEO4J_ISSUE = Object.freeze({
62
- /** The input holds invalid UTF-8 (fatal). */
76
+ ...INPUT_ISSUE,
77
+ ...ELEMENT_ISSUE,
78
+ /**
79
+ * A cell that does not parse as its column's declared type ("x" in an `:int` column, a `:byte` beyond 127). The
80
+ * row is skipped.
81
+ */
82
+ COLUMN_TYPE: COLUMN_TYPE_CODE,
83
+ /** The input is not valid UTF-8. The import stops. */
63
84
  INVALID_UTF8: INVALID_UTF8_CODE,
64
- /** Invalid bytes in the encoding a BOM, a declaration or the encoding option chose (fatal). */
85
+ /**
86
+ * Some bytes are not valid in the encoding that was chosen (by a byte order mark, the file's declaration or the
87
+ * `encoding` option). The import stops.
88
+ */
65
89
  INVALID_ENCODING: INVALID_ENCODING_CODE,
66
90
  /** Bytes that are not UTF-8 and declare no encoding were read as windows-1252. */
67
91
  ENCODING_FALLBACK: ENCODING_FALLBACK_CODE,
68
92
  /** A declared encoding the platform cannot decode was ignored. */
69
93
  UNKNOWN_ENCODING: UNKNOWN_ENCODING_CODE,
70
- /** An unterminated quoted field (fatal). */
94
+ /** A quoted field is never closed. The import stops. */
71
95
  CSV_UNCLOSED_QUOTE: UNCLOSED_QUOTE_CODE,
72
- /** Text after a closing quote (fatal). */
96
+ /**
97
+ * There is text after a closing quote, such as `"a"b`. Inside a quoted field, write a quote as two quotes. The
98
+ * import stops.
99
+ */
73
100
  CSV_QUOTE: BAD_QUOTE_CODE,
74
- /** No header or a malformed header (fatal). */
101
+ /** The file has no header, or a header neo4j-admin would refuse. The import stops. */
75
102
  HEADER: HEADER_CODE,
76
103
  /** A row with a different field count than the header. */
77
104
  COLUMN_COUNT: COLUMN_COUNT_CODE,
@@ -85,46 +112,71 @@ export const NEO4J_ISSUE = Object.freeze({
85
112
  ID_SPACE_COLLISION: ID_SPACE_COLLISION_CODE,
86
113
  /** A spaced relationship endpoint `Space:id` that names a node declared without a space; the row is skipped. */
87
114
  ENDPOINT_SPACE: ENDPOINT_SPACE_CODE,
88
- /** Two id texts merged into one number under ids "number". */
115
+ /** Two different id texts became the same number because `ids` is "number", so their nodes were merged. */
89
116
  ID_MERGED: ID_MERGED_CODE,
90
117
  /** A header brace option the importer does not apply. */
91
118
  HEADER_OPTION_IGNORED: HEADER_OPTION_CODE,
92
119
  /** A declared type the format does not define (kept as string). */
93
120
  UNKNOWN_ATTR_TYPE: UNKNOWN_ATTR_TYPE_CODE,
94
- /** A long value beyond 2^53 rounded. */
121
+ /** An integer beyond 2^53 was stored as the nearest 64-bit float; pass `long: "string"` to keep every digit. */
95
122
  PRECISION: PRECISION_CODE,
96
- /** A column renamed `<name>#<id>` because the name was taken (design section 5.6). */
123
+ /**
124
+ * An attribute was renamed `<name>#<suffix>` because another attribute already has its name, for example a
125
+ * repeated column header.
126
+ */
97
127
  COLUMN_RENAMED: COLUMN_RENAMED_CODE,
98
- /** A role the caller's sink already holds. */
128
+ /**
129
+ * You read into a graph builder that already has an id, label or position attribute, so this file's one is kept as
130
+ * a plain attribute.
131
+ */
99
132
  ROLE_TAKEN: ROLE_TAKEN_CODE,
100
- /** A common option the importer has no use for (nodeIdFrom, defaultDirected, ...). */
133
+ /** You set an option this format does not use; it had no effect. The message names the option. */
101
134
  OPTION_IGNORED: OPTION_IGNORED_CODE,
102
- /** A builder-policy option the sink does not honour. */
135
+ /**
136
+ * You read into your own graph builder, which was created with a different `addMissingNodes`, `duplicateEdges`,
137
+ * `selfLoops` or `weightDtype` than the option you passed; the builder's setting applies.
138
+ */
103
139
  SINK_OPTION: SINK_OPTION_CODE,
140
+ /** A relationship with an empty :TYPE cell (neo4j-admin requires one); kept without a type. */
141
+ MISSING_TYPE: MISSING_TYPE_CODE,
142
+ /** A file under the nodes option holds a relationship header, or the reverse; read by its header. */
143
+ SECTION_KIND: SECTION_KIND_CODE,
144
+ /** Relationship endpoints no node row declares became nodes (neo4j-admin refuses them). */
145
+ DANGLING_REFERENCE: DANGLING_REFERENCE_CODE,
104
146
  });
105
147
 
106
148
  /**
107
149
  * The loss-note codes of the Neo4j importer (report.lossy) and exporter (check()), by name: the
108
150
  * Neo4j ones and, aliased, the shared ones it records (`LOSS` holds the generic pre-flight's).
151
+ * @category Built-in formats
109
152
  */
110
153
  export const NEO4J_LOSS = Object.freeze({
111
154
  /** `:IGNORE` columns skipped on import. */
112
155
  IGNORED_COLUMNS: IGNORED_COLUMNS_LOSS,
113
- /** Undirected edges (an undirected snapshot, the folded pairs of a mixed one) written as directed relationships. */
156
+ /**
157
+ * Neo4j relationships are always directed, so the edges of an undirected graph, and the undirected edges of a
158
+ * mixed graph, read back as directed.
159
+ */
114
160
  UNDIRECTED_AS_DIRECTED: UNDIRECTED_LOSS,
115
161
  /** A mutual pair written as two directed relationships without its mark. */
116
162
  MUTUAL_EXPANDED: MUTUAL_EXPANDED_CODE,
117
- /** A role column Neo4j has no slot for (label, ...) written as a plain property. */
163
+ /** An attribute with a role the format has no place for is written as a plain attribute; the role is lost. */
118
164
  ROLE_DROPPED: ROLE_DROPPED_CODE,
119
- /** A plain `weight` edge column reads back as THE weight (the importer's weightFrom default). */
165
+ /**
166
+ * An edge attribute named `weight` that is not the graph's weight reads back as the edge weight, because the
167
+ * Neo4j importer reads weights from the `weight` property by default.
168
+ */
120
169
  WEIGHT_KEY_CLASH: WEIGHT_KEY_CLASH_CODE,
121
- /** A node id whose text re-imports as another type under the canonical rule. */
170
+ /**
171
+ * A node id that reads back as a different type, such as the text "7" as the number 7. Read the file with `ids:
172
+ * "string"` or `ids: "keep"` to keep the type.
173
+ */
122
174
  ID_TEXT_TYPE: ID_TEXT_TYPE_LOSS,
123
- /** A number and a string id with the same text; export() throws. */
175
+ /** Two node ids would be written as the same text (the number 5 and the text "5"); the save fails with E_INVALID_ID. */
124
176
  ID_TEXT_COLLISION: ID_TEXT_COLLISION_LOSS,
125
- /** The weight column name is taken by an edge column; export() throws. */
177
+ /** The `weightColumn` name is already an edge attribute; the save fails. */
126
178
  WEIGHT_COLUMN_TAKEN: WEIGHT_COLUMN_TAKEN_LOSS,
127
- /** The id column name is taken by a node column; export() throws. */
179
+ /** The `idColumn` name is already a node attribute; the save fails. */
128
180
  ID_COLUMN_TAKEN: ID_COLUMN_TAKEN_LOSS,
129
181
  /** Several stored-id properties; one becomes the `:ID` column. */
130
182
  MULTIPLE_ID_PROPERTIES: MULTIPLE_ID_PROPERTIES_LOSS,