@graphty/graph-io 0.3.17 → 0.3.19
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +1 -1
- package/README.md +64 -3
- package/dist/chunks/{escape-scjHxjpr.js → escape-CWExcecC.js} +3 -2
- package/dist/chunks/{escape-scjHxjpr.js.map → escape-CWExcecC.js.map} +1 -1
- package/dist/chunks/exporter-CbMZyVt-.js +735 -0
- package/dist/chunks/exporter-CbMZyVt-.js.map +1 -0
- package/dist/chunks/importer-BAP4PrxR.js +2194 -0
- package/dist/chunks/importer-BAP4PrxR.js.map +1 -0
- package/dist/chunks/{importer-Xg07gk7p.js → importer-BNFuV1-K.js} +5 -3
- package/dist/chunks/{importer-Xg07gk7p.js.map → importer-BNFuV1-K.js.map} +1 -1
- package/dist/chunks/{importer-BmOl9gLW.js → importer-BVGtU1NA.js} +5 -3
- package/dist/chunks/{importer-BmOl9gLW.js.map → importer-BVGtU1NA.js.map} +1 -1
- package/dist/chunks/{importer-ruMWWvVs.js → importer-BW-Ft2ps.js} +5 -3
- package/dist/chunks/{importer-ruMWWvVs.js.map → importer-BW-Ft2ps.js.map} +1 -1
- package/dist/chunks/{importer-B6rKRxzv.js → importer-Bm1_5vPS.js} +781 -104
- package/dist/chunks/importer-Bm1_5vPS.js.map +1 -0
- package/dist/chunks/importer-ByPGO-09.js +1614 -0
- package/dist/chunks/importer-ByPGO-09.js.map +1 -0
- package/dist/chunks/importer-DOepkgnG.js +1713 -0
- package/dist/chunks/importer-DOepkgnG.js.map +1 -0
- package/dist/chunks/json-elements-CZY1wiZh.js +779 -0
- package/dist/chunks/json-elements-CZY1wiZh.js.map +1 -0
- package/dist/chunks/ontology-BnrJ4I98.js +113 -0
- package/dist/chunks/ontology-BnrJ4I98.js.map +1 -0
- package/dist/chunks/{records-DSpbTE5s.js → records-BzNicMsf.js} +2 -2
- package/dist/chunks/{records-DSpbTE5s.js.map → records-BzNicMsf.js.map} +1 -1
- package/dist/chunks/{writer-DHHfHn11.js → report-BcWboivV.js} +106 -928
- package/dist/chunks/report-BcWboivV.js.map +1 -0
- package/dist/chunks/weights-CwISIpCP.js +176 -0
- package/dist/chunks/weights-CwISIpCP.js.map +1 -0
- package/dist/chunks/writer-DQiKgQJc.js +656 -0
- package/dist/chunks/writer-DQiKgQJc.js.map +1 -0
- package/dist/csv.js +5 -3
- package/dist/csv.js.map +1 -1
- package/dist/cx.d.ts +1 -0
- package/dist/cx.js +6 -0
- package/dist/cx.js.map +1 -0
- package/dist/cx2.d.ts +1 -0
- package/dist/cx2.js +10 -0
- package/dist/cx2.js.map +1 -0
- package/dist/dot.js +1 -1
- package/dist/gexf.js +15 -3
- package/dist/gexf.js.map +1 -1
- package/dist/gml.js +5 -3
- package/dist/gml.js.map +1 -1
- package/dist/graph-io.js +158 -383
- package/dist/graph-io.js.map +1 -1
- package/dist/graphml.js +1 -1
- package/dist/json.js +1 -1
- package/dist/neo4j.js +5 -3
- package/dist/neo4j.js.map +1 -1
- package/dist/obo.d.ts +1 -0
- package/dist/obo.js +6 -0
- package/dist/obo.js.map +1 -0
- package/dist/pajek.js +1 -1
- package/dist/src/common/json-elements.d.ts +286 -0
- package/dist/src/common/json-elements.d.ts.map +1 -0
- package/dist/src/common/json-elements.js +926 -0
- package/dist/src/common/json-elements.js.map +1 -0
- package/dist/src/common/ontology.d.ts +59 -0
- package/dist/src/common/ontology.d.ts.map +1 -0
- package/dist/src/common/ontology.js +147 -0
- package/dist/src/common/ontology.js.map +1 -0
- package/dist/src/formats/cx/importer.d.ts +133 -0
- package/dist/src/formats/cx/importer.d.ts.map +1 -0
- package/dist/src/formats/cx/importer.js +2220 -0
- package/dist/src/formats/cx/importer.js.map +1 -0
- package/dist/src/formats/cx/index.d.ts +7 -0
- package/dist/src/formats/cx/index.d.ts.map +1 -0
- package/dist/src/formats/cx/index.js +7 -0
- package/dist/src/formats/cx/index.js.map +1 -0
- package/dist/src/formats/cx2/exporter.d.ts +59 -0
- package/dist/src/formats/cx2/exporter.d.ts.map +1 -0
- package/dist/src/formats/cx2/exporter.js +864 -0
- package/dist/src/formats/cx2/exporter.js.map +1 -0
- package/dist/src/formats/cx2/importer.d.ts +169 -0
- package/dist/src/formats/cx2/importer.d.ts.map +1 -0
- package/dist/src/formats/cx2/importer.js +1652 -0
- package/dist/src/formats/cx2/importer.js.map +1 -0
- package/dist/src/formats/cx2/index.d.ts +7 -0
- package/dist/src/formats/cx2/index.d.ts.map +1 -0
- package/dist/src/formats/cx2/index.js +7 -0
- package/dist/src/formats/cx2/index.js.map +1 -0
- package/dist/src/formats/gexf/exporter.d.ts +2 -0
- package/dist/src/formats/gexf/exporter.d.ts.map +1 -1
- package/dist/src/formats/gexf/exporter.js +6 -0
- package/dist/src/formats/gexf/exporter.js.map +1 -1
- package/dist/src/formats/gexf/importer.d.ts +2 -4
- package/dist/src/formats/gexf/importer.d.ts.map +1 -1
- package/dist/src/formats/gexf/importer.js +2 -4
- package/dist/src/formats/gexf/importer.js.map +1 -1
- package/dist/src/formats/gexf/index.d.ts +1 -1
- package/dist/src/formats/gexf/index.js +2 -2
- package/dist/src/formats/gexf/index.js.map +1 -1
- package/dist/src/formats/gml/exporter.js +1 -1
- package/dist/src/formats/gml/exporter.js.map +1 -1
- package/dist/src/formats/json/dialect.d.ts +8 -6
- package/dist/src/formats/json/dialect.d.ts.map +1 -1
- package/dist/src/formats/json/dialect.js +26 -3
- package/dist/src/formats/json/dialect.js.map +1 -1
- package/dist/src/formats/json/importer.d.ts +324 -7
- package/dist/src/formats/json/importer.d.ts.map +1 -1
- package/dist/src/formats/json/importer.js +159 -126
- package/dist/src/formats/json/importer.js.map +1 -1
- package/dist/src/formats/json/obographs.d.ts +21 -0
- package/dist/src/formats/json/obographs.d.ts.map +1 -0
- package/dist/src/formats/json/obographs.js +476 -0
- package/dist/src/formats/json/obographs.js.map +1 -0
- package/dist/src/formats/obo/importer.d.ts +90 -0
- package/dist/src/formats/obo/importer.d.ts.map +1 -0
- package/dist/src/formats/obo/importer.js +1248 -0
- package/dist/src/formats/obo/importer.js.map +1 -0
- package/dist/src/formats/obo/index.d.ts +7 -0
- package/dist/src/formats/obo/index.d.ts.map +1 -0
- package/dist/src/formats/obo/index.js +7 -0
- package/dist/src/formats/obo/index.js.map +1 -0
- package/dist/src/formats/obo/syntax.d.ts +121 -0
- package/dist/src/formats/obo/syntax.d.ts.map +1 -0
- package/dist/src/formats/obo/syntax.js +424 -0
- package/dist/src/formats/obo/syntax.js.map +1 -0
- package/dist/src/index.d.ts +3 -0
- package/dist/src/index.d.ts.map +1 -1
- package/dist/src/index.js +3 -0
- package/dist/src/index.js.map +1 -1
- package/dist/src/registry.d.ts.map +1 -1
- package/dist/src/registry.js +8 -1
- package/dist/src/registry.js.map +1 -1
- package/dist/src/sniff.d.ts +1 -1
- package/dist/src/sniff.d.ts.map +1 -1
- package/dist/src/sniff.js +25 -3
- package/dist/src/sniff.js.map +1 -1
- package/package.json +16 -1
- package/src/common/json-elements.ts +1147 -0
- package/src/common/ontology.ts +169 -0
- package/src/formats/cx/importer.ts +2733 -0
- package/src/formats/cx/index.ts +7 -0
- package/src/formats/cx2/exporter.ts +1036 -0
- package/src/formats/cx2/importer.ts +2187 -0
- package/src/formats/cx2/index.ts +7 -0
- package/src/formats/gexf/exporter.ts +11 -0
- package/src/formats/gexf/importer.ts +2 -2
- package/src/formats/gexf/index.ts +1 -1
- package/src/formats/gml/exporter.ts +1 -1
- package/src/formats/json/dialect.ts +37 -7
- package/src/formats/json/importer.ts +210 -132
- package/src/formats/json/obographs.ts +563 -0
- package/src/formats/obo/importer.ts +1695 -0
- package/src/formats/obo/index.ts +7 -0
- package/src/formats/obo/syntax.ts +466 -0
- package/src/index.ts +11 -0
- package/src/registry.ts +8 -1
- package/src/sniff.ts +48 -5
- package/dist/chunks/importer-B6rKRxzv.js.map +0 -1
- package/dist/chunks/writer-DHHfHn11.js.map +0 -1
package/dist/cx.d.ts
ADDED
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@@ -0,0 +1 @@
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1
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export * from "./src/formats/cx/index.js";
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package/dist/cx.js
ADDED
package/dist/cx.js.map
ADDED
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@@ -0,0 +1 @@
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1
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{"version":3,"file":"cx.js","sources":[],"sourcesContent":[],"names":[],"mappings":";"}
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package/dist/cx2.d.ts
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@@ -0,0 +1 @@
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export * from "./src/formats/cx2/index.js";
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package/dist/cx2.js
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@@ -0,0 +1,10 @@
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import { C, a, c } from "./chunks/exporter-CbMZyVt-.js";
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import { C as C2, c as c2 } from "./chunks/importer-DOepkgnG.js";
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export {
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C as CX2_CAPABILITIES,
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C2 as CX2_ISSUE,
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a as CX2_LOSS,
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c as cx2Exporter,
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c2 as cx2Importer
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};
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//# sourceMappingURL=cx2.js.map
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package/dist/cx2.js.map
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@@ -0,0 +1 @@
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{"version":3,"file":"cx2.js","sources":[],"sourcesContent":[],"names":[],"mappings":";;"}
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package/dist/dot.js
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package/dist/gexf.js
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@@ -1,6 +1,8 @@
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1
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import {
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import { aG as TIME_TEXT_ROLE, aH as TIME_TEXT_SUFFIX, aC as resolveImportOptions, I as ImportReportBuilder, az as reportSinkOptions, aA as reportUnusedOptions, aD as textChunks, al as XML_SYNTAX_CODE, t as throwIfAborted, F as IdCoercer, p as DirectionResolver, a6 as STRAY_TEXT_CODE, S as NO_GRAPH_CODE, f as COUNT_HINT_CODE, l as DUPLICATE_ATTRIBUTE_CODE, aI as declareAttribute, ar as declareResolved, K as MISSING_ID_CODE, o as DUPLICATE_NODE_CODE, ag as UNKNOWN_PARENT_CODE, M as MISSING_ENDPOINT_CODE, m as DUPLICATE_EDGE_ID_CODE, aJ as parseDeclaredTemporal, aq as declareCompanion, aK as parseDeclaredValue, aL as losesPrecision, Z as PRECISION_CODE, aM as parseTimeText, aN as splitListText, ae as UNKNOWN_ELEMENT_CODE, u as ID_MERGED_CODE, aO as timeTextCompanion, aF as parseDecimalText, ax as pairFolding, aB as resolveExportOptions, aP as formatTimeValue, aQ as mapDeclaredType, aR as joinListText, aS as formatTemporal, av as isCanonicalIntegerText, N as MIXED_DIRECTION_CODE, j as DIRECTION_FORCED_CODE, k as DIRECTION_REFUSED_CODE, a2 as SINK_OPTION_CODE, U as OPTION_IGNORED_CODE, a1 as ROLE_TAKEN_CODE, C as COLUMN_RENAMED_CODE, c as BAD_OPTIONS_CODE, b as BAD_DEFAULT_CODE, ad as UNKNOWN_ATTR_TYPE_CODE, af as UNKNOWN_ENCODING_CODE, r as ENCODING_FALLBACK_CODE, y as INVALID_ENCODING_CODE, z as INVALID_UTF8_CODE } from "./chunks/report-BcWboivV.js";
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import { GraphFormatError, INVALID_INDEX, MAX_COUNT } from "@graphty/graph-format";
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import {
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import { i as isWeightField, p as parseWeightText, e as explicitWeights, a as formatF32, b as formatF64, d as formatInteger } from "./chunks/weights-CwISIpCP.js";
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import { t as tokenizeXml, d as xmlDeclaredEncoding, X as XmlSyntaxError, l as localName, e as isWhitespace, x as xmlIllegalTextNotes, f as escapeXmlText, g as escapeXmlAttribute } from "./chunks/escape-CWExcecC.js";
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import { c as capabilities, L as LOSS, j as joinText, e as encodeChunks, s as sanitizeIds, a as checkCapabilities } from "./chunks/writer-DQiKgQJc.js";
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const GEXF_FORMAT = "gexf";
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const GEXF_NAMESPACES = {
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"1.2": { gexf: "http://www.gexf.net/1.2draft", viz: "http://www.gexf.net/1.2draft/viz" },
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const ATTRIBUTES_CLASS_CODE = "E_GEXF_ATTRIBUTES_CLASS";
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const ATTRIBUTE_ID_CODE = "E_GEXF_ATTRIBUTE_ID";
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const HEADER_VALUE_CODE = "W_GEXF_HEADER_VALUE";
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const DUPLICATE_ATTRIBUTE_CODE = "W_GEXF_DUPLICATE_ATTRIBUTE";
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const ATTRIBUTE_TYPE_CODE = "W_GEXF_ATTRIBUTE_TYPE";
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const UNKNOWN_ATTRIBUTE_CODE = "W_GEXF_UNKNOWN_ATTRIBUTE";
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const ATTVALUE_SHAPE_CODE = "W_GEXF_ATTVALUE_SHAPE";
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DECLARED_TYPE: "W_DECLARED_TYPE",
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/** A node id whose text reads back as the other type under the canonical rule (design section 4.1): a non-integer number, a string of integer text. */
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ID_TEXT_TYPE: LOSS.ID_TEXT_TYPE,
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/** A numeric edge id column: GEXF edge ids read back as strings. */
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EDGE_ID_TEXT: "W_GEXF_EDGE_ID_TEXT",
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/** A viz role column (position, color, size, thickness) that is not f32; the importer reads viz values as f32. */
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VIZ_DTYPE: "W_GEXF_VIZ_DTYPE",
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/** A plain `weight` edge column reads back as THE weight (the importer's weightFrom default). */
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typeChanges
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);
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}
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const edgeIds = snapshot.edges.byRole("id");
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if (edgeIds !== null && edgeIds.dtype !== "string" && edgeIds.dtype !== "dict") {
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note(
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GEXF_LOSS.EDGE_ID_TEXT,
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`edge id column "${edgeIds.meta.name}" is ${edgeIds.dtype}; GEXF edge ids read back as strings`,
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edgeIds.meta.name,
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snapshot.edgeCount - edgeIds.nullCount
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);
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}
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const tables = collectTemporalTables(snapshot, version, note);
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const nodeRoles = collectRoles(snapshot.nodes, "node", note);
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const edgeRoles = collectRoles(snapshot.edges, "edge", note);
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