@graphty/algorithms 1.3.1 → 1.5.0

package/dist/src/flow/ford-fulkerson.d.ts

@@ -26,6 +26,10 @@ export interface MaxFlowResult {
 }
 /**
  * Utility function to create a flow network for bipartite matching
+ * @param leftNodes - Array of left partition node identifiers
+ * @param rightNodes - Array of right partition node identifiers
+ * @param edges - Array of edges connecting left nodes to right nodes
+ * @returns The flow network graph with source and sink nodes
  */
 export declare function createBipartiteFlowNetwork(leftNodes: string[], rightNodes: string[], edges: [string, string][]): {
     graph: Map<string, Map<string, number>>;
@@ -34,7 +38,6 @@ export declare function createBipartiteFlowNetwork(leftNodes: string[], rightNod
 };
 /**
  * Ford-Fulkerson algorithm using DFS for finding augmenting paths
- *
  * @param graph - Adjacency list representation with capacities - accepts Graph class or Map
  * @param source - Source node
  * @param sink - Sink node
@@ -47,7 +50,6 @@ export declare function fordFulkerson(graph: Graph, source: string, sink: string
 /**
  * Edmonds-Karp algorithm (Ford-Fulkerson with BFS)
  * More efficient implementation with better time complexity
- *
  * @param graph - Adjacency list representation with capacities - accepts Graph class or Map
  * @param source - Source node
  * @param sink - Sink node

package/dist/src/flow/ford-fulkerson.d.ts.map

@@ -1 +1 @@
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package/dist/src/flow/ford-fulkerson.js

@@ -2,6 +2,8 @@ import { bfsAugmentingPath } from "../algorithms/traversal/bfs-variants.js";
 import { graphToMap } from "../utils/graph-converters.js";
 /**
  * Create residual graph from original graph
+ * @param graph - The original graph with capacity values
+ * @returns A residual graph initialized with the original capacities
  */
 function createResidualGraph(graph) {
     const residual = new Map();
@@ -18,6 +20,10 @@ function createResidualGraph(graph) {
 }
 /**
  * Find augmenting path using DFS
+ * @param residualGraph - The residual graph with remaining capacities
+ * @param source - The source node
+ * @param sink - The sink node
+ * @returns An array of nodes forming the path, or null if no path exists
  */
 function findAugmentingPathDFS(residualGraph, source, sink) {
     const visited = new Set();
@@ -49,6 +55,11 @@ function findAugmentingPathDFS(residualGraph, source, sink) {
 }
 /**
  * Update flow along an augmenting path
+ * @param residualGraph - The residual graph to update
+ * @param flowGraph - The flow graph to update with new flow values
+ * @param originalGraph - The original graph for edge direction reference
+ * @param path - The augmenting path to update flow along
+ * @param pathFlow - The amount of flow to push through the path
  */
 function updateFlow(residualGraph, flowGraph, originalGraph, path, pathFlow) {
     for (let i = 0; i < path.length - 1; i++) {
@@ -93,6 +104,9 @@ function updateFlow(residualGraph, flowGraph, originalGraph, path, pathFlow) {
 }
 /**
  * Find minimum cut from source side
+ * @param residualGraph - The residual graph after max flow computation
+ * @param source - The source node
+ * @returns The minimum cut partition with source and sink sets and cut edges
  */
 function findMinCut(residualGraph, source) {
     // Find all reachable nodes from source in residual graph
@@ -137,6 +151,11 @@ function findMinCut(residualGraph, source) {
 }
 /**
  * Core max flow algorithm implementation
+ * @param graph - The graph with capacity values
+ * @param source - The source node
+ * @param sink - The sink node
+ * @param findPath - Function to find an augmenting path in the residual graph
+ * @returns The maximum flow result including flow value, flow graph, and minimum cut
  */
 function maxFlowCore(graph, source, sink, findPath) {
     if (!graph.has(source) || !graph.has(sink)) {
@@ -171,6 +190,10 @@ function maxFlowCore(graph, source, sink, findPath) {
 }
 /**
  * Internal implementation of Ford-Fulkerson algorithm using DFS
+ * @param graph - The graph with capacity values
+ * @param source - The source node
+ * @param sink - The sink node
+ * @returns The maximum flow result
  */
 function fordFulkersonImpl(graph, source, sink) {
     // Adapter function for DFS path finding
@@ -197,6 +220,10 @@ function fordFulkersonImpl(graph, source, sink) {
 }
 /**
  * Internal implementation of Edmonds-Karp algorithm
+ * @param graph - The graph with capacity values
+ * @param source - The source node
+ * @param sink - The sink node
+ * @returns The maximum flow result
  */
 function edmondsKarpImpl(graph, source, sink) {
     // Use BFS variant for path finding
@@ -207,6 +234,10 @@ function edmondsKarpImpl(graph, source, sink) {
 }
 /**
  * Utility function to create a flow network for bipartite matching
+ * @param leftNodes - Array of left partition node identifiers
+ * @param rightNodes - Array of right partition node identifiers
+ * @param edges - Array of edges connecting left nodes to right nodes
+ * @returns The flow network graph with source and sink nodes
  */
 export function createBipartiteFlowNetwork(leftNodes, rightNodes, edges) {
     const graph = new Map();
@@ -246,7 +277,6 @@ export function createBipartiteFlowNetwork(leftNodes, rightNodes, edges) {
 }
 /**
  * Ford-Fulkerson algorithm using DFS for finding augmenting paths
- *
  * @param graph - Adjacency list representation with capacities - accepts Graph class or Map
  * @param source - Source node
  * @param sink - Sink node
@@ -263,7 +293,6 @@ export function fordFulkerson(graph, source, sink) {
 /**
  * Edmonds-Karp algorithm (Ford-Fulkerson with BFS)
  * More efficient implementation with better time complexity
- *
  * @param graph - Adjacency list representation with capacities - accepts Graph class or Map
  * @param source - Source node
  * @param sink - Sink node

package/dist/src/flow/ford-fulkerson.js.map

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package/dist/src/flow/min-cut.d.ts

@@ -17,7 +17,6 @@ export interface MinCutResult {
 /**
  * Find minimum s-t cut using max flow
  * The minimum cut value equals the maximum flow value (max-flow min-cut theorem)
- *
  * @param graph - Weighted graph
  * @param source - Source node
  * @param sink - Sink node
@@ -29,7 +28,6 @@ export declare function minSTCut(graph: Graph, source: string, sink: string): Mi
 /**
  * Stoer-Wagner algorithm for finding global minimum cut
  * Finds the minimum cut that separates the graph into two parts
- *
  * @param graph - Undirected weighted graph - accepts Graph class or Map representation
  * @returns Global minimum cut
  *
@@ -39,7 +37,6 @@ export declare function stoerWagner(graph: Graph | Map<string, Map<string, numbe
 /**
  * Karger's randomized min-cut algorithm
  * Probabilistic algorithm that finds min cut with high probability
- *
  * @param graph - Undirected graph - accepts Graph class or Map representation
  * @param iterations - Number of iterations (higher = better accuracy)
  * @returns Minimum cut found

package/dist/src/flow/min-cut.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"min-cut.d.ts","sourceRoot":"","sources":["../../../src/flow/min-cut.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAI9C,MAAM,WAAW,YAAY;IACzB,QAAQ,EAAE,MAAM,CAAC;IACjB,UAAU,EAAE,GAAG,CAAC,MAAM,CAAC,CAAC;IACxB,UAAU,EAAE,GAAG,CAAC,MAAM,CAAC,CAAC;IACxB,QAAQ,EAAE;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,EAAE,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,EAAE,CAAC;CAC5D;AAED;;;;;;;;;GASG;AACH,wBAAgB,QAAQ,CAAC,KAAK,EAAE,KAAK,EAAE,MAAM,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,YAAY,CA6BjF;AAED;;;;;;;GAOG;AACH,wBAAgB,WAAW,CAAC,KAAK,EAAE,KAAK,GAAG,GAAG,CAAC,MAAM,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC,GAAG,YAAY,CAsFzF;AA4JD;;;;;;;;GAQG;AACH,wBAAgB,YAAY,CAAC,KAAK,EAAE,KAAK,GAAG,GAAG,CAAC,MAAM,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC,EAAE,UAAU,SAAM,GAAG,YAAY,CAoC5G"}

package/dist/src/flow/min-cut.js

@@ -8,7 +8,6 @@ import { fordFulkerson } from "./ford-fulkerson.js";
 /**
  * Find minimum s-t cut using max flow
  * The minimum cut value equals the maximum flow value (max-flow min-cut theorem)
- *
  * @param graph - Weighted graph
  * @param source - Source node
  * @param sink - Sink node
@@ -45,7 +44,6 @@ export function minSTCut(graph, source, sink) {
 /**
  * Stoer-Wagner algorithm for finding global minimum cut
  * Finds the minimum cut that separates the graph into two parts
- *
  * @param graph - Undirected weighted graph - accepts Graph class or Map representation
  * @returns Global minimum cut
  *
@@ -128,6 +126,9 @@ export function stoerWagner(graph) {
 }
 /**
  * Minimum cut phase of Stoer-Wagner algorithm
+ * @param graph - The undirected weighted graph
+ * @param nodes - Array of remaining nodes in the graph
+ * @returns The cut result with last two nodes, cut value, and partition
  */
 function minimumCutPhase(graph, nodes) {
     const n = nodes.length;
@@ -188,6 +189,10 @@ function minimumCutPhase(graph, nodes) {
 }
 /**
  * Contract two nodes in the graph
+ * @param graph - The graph to modify by contracting nodes
+ * @param nodes - Array of nodes to update after contraction
+ * @param s - The node to keep after contraction
+ * @param t - The node to merge into s
  */
 function contractNodes(graph, nodes, s, t) {
     // Merge t into s
@@ -219,6 +224,8 @@ function contractNodes(graph, nodes, s, t) {
 }
 /**
  * Convert directed graph to undirected
+ * @param graph - The directed graph to convert
+ * @returns An undirected graph with edges in both directions
  */
 function makeUndirected(graph) {
     const undirected = new Map();
@@ -247,7 +254,6 @@ function makeUndirected(graph) {
 /**
  * Karger's randomized min-cut algorithm
  * Probabilistic algorithm that finds min cut with high probability
- *
  * @param graph - Undirected graph - accepts Graph class or Map representation
  * @param iterations - Number of iterations (higher = better accuracy)
  * @returns Minimum cut found
@@ -289,6 +295,8 @@ export function kargerMinCut(graph, iterations = 100) {
 }
 /**
  * Single run of Karger's algorithm
+ * @param graph - The undirected weighted graph
+ * @returns The cut result with cut value and two partitions
  */
 function kargerSingleRun(graph) {
     // Create a copy of the graph
@@ -305,7 +313,8 @@ function kargerSingleRun(graph) {
         const edges = [];
         for (const [u, neighbors] of workGraph) {
             for (const [v, weight] of neighbors) {
-                if (u < v) { // Avoid duplicates
+                if (u < v) {
+                    // Avoid duplicates
                     edges.push([u, v, weight]);
                 }
             }
@@ -351,6 +360,10 @@ function kargerSingleRun(graph) {
 }
 /**
  * Contract edge in Karger's algorithm
+ * @param graph - The working graph to modify
+ * @param superNodes - Map tracking which original nodes are in each super node
+ * @param u - First endpoint of the edge to contract
+ * @param v - Second endpoint of the edge to contract (merged into u)
  */
 function contractKarger(graph, superNodes, u, v) {
     // Merge v into u

package/dist/src/flow/min-cut.js.map

@@ -1 +1 @@
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package/dist/src/index.d.ts

@@ -1,8 +1,9 @@
 /**
- * @graphty/algorithms - Graph algorithms library for browser environments
+ * graphty/algorithms - Graph algorithms library for browser environments
  *
  * A comprehensive TypeScript library implementing fundamental graph algorithms
  * optimized for browser environments and visualization applications.
+ * @module
  */
 export { Graph } from "./core/graph.js";
 export type { BellmanFordResult, CentralityOptions, CentralityResult, CommunityResult, ComponentResult, DijkstraOptions, Edge, FloydWarshallResult, GirvanNewmanOptions, GraphConfig, LouvainOptions, MSTResult, Node, NodeId, PageRankOptions, ShortestPathResult, TraversalOptions, TraversalResult, } from "./types/index.js";

package/dist/src/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAGH,OAAO,EAAE,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAGxC,YAAY,EACR,iBAAiB,EACjB,iBAAiB,EACjB,gBAAgB,EAChB,eAAe,EACf,eAAe,EACf,eAAe,EACf,IAAI,EACJ,mBAAmB,EACnB,mBAAmB,EACnB,WAAW,EACX,cAAc,EACd,SAAS,EACT,IAAI,EACJ,MAAM,EACN,eAAe,EACf,kBAAkB,EAClB,gBAAgB,EAChB,eAAe,GAClB,MAAM,kBAAkB,CAAC;AAG1B,cAAc,uBAAuB,CAAC;AAGtC,cAAc,qBAAqB,CAAC;AAGpC,cAAc,4BAA4B,CAAC;AAG3C,cAAc,sBAAsB,CAAC"}

package/dist/src/index.js

@@ -1,8 +1,9 @@
 /**
- * @graphty/algorithms - Graph algorithms library for browser environments
+ * graphty/algorithms - Graph algorithms library for browser environments
  *
  * A comprehensive TypeScript library implementing fundamental graph algorithms
  * optimized for browser environments and visualization applications.
+ * @module
  */
 // Core exports
 export { Graph } from "./core/graph.js";

package/dist/src/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,eAAe;AACf,OAAO,EAAE,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAwBxC,oBAAoB;AACpB,cAAc,uBAAuB,CAAC;AAEtC,2CAA2C;AAC3C,cAAc,qBAAqB,CAAC;AAEpC,yBAAyB;AACzB,cAAc,4BAA4B,CAAC;AAE3C,8BAA8B;AAC9B,cAAc,sBAAsB,CAAC;AAErC,iDAAiD;AACjD,+DAA+D"}

package/dist/src/link-prediction/adamic-adar.d.ts

@@ -16,24 +16,45 @@ import type { LinkPredictionOptions, LinkPredictionScore } from "./common-neighb
  */
 /**
  * Calculate Adamic-Adar index for a pair of nodes
+ * @param graph - The input graph
+ * @param source - The source node ID
+ * @param target - The target node ID
+ * @param options - Link prediction options
+ * @returns The Adamic-Adar score for the node pair
  */
 export declare function adamicAdarScore(graph: Graph, source: NodeId, target: NodeId, options?: LinkPredictionOptions): number;
 /**
  * Calculate Adamic-Adar scores for all possible node pairs
+ * @param graph - The input graph
+ * @param options - Link prediction options
+ * @returns Array of link prediction scores sorted by score descending
  */
 export declare function adamicAdarPrediction(graph: Graph, options?: LinkPredictionOptions): LinkPredictionScore[];
 /**
  * Calculate Adamic-Adar scores for specific node pairs
+ * @param graph - The input graph
+ * @param pairs - Array of node ID pairs to calculate scores for
+ * @param options - Link prediction options
+ * @returns Array of link prediction scores for the specified pairs
  */
 export declare function adamicAdarForPairs(graph: Graph, pairs: [NodeId, NodeId][], options?: LinkPredictionOptions): LinkPredictionScore[];
 /**
  * Get top Adamic-Adar candidates for link prediction for a specific node
+ * @param graph - The input graph
+ * @param node - The node ID to get candidates for
+ * @param options - Link prediction options with optional candidate list
+ * @returns Array of top link prediction candidates sorted by score descending
  */
 export declare function getTopAdamicAdarCandidatesForNode(graph: Graph, node: NodeId, options?: LinkPredictionOptions & {
     candidates?: NodeId[];
 }): LinkPredictionScore[];
 /**
  * Calculate precision and recall for Adamic-Adar link prediction evaluation
+ * @param trainingGraph - The training graph without test edges
+ * @param testEdges - Array of node pairs that are actual edges
+ * @param nonEdges - Array of node pairs that are not edges
+ * @param options - Link prediction options
+ * @returns Evaluation metrics including precision, recall, F1 score, and AUC
  */
 export declare function evaluateAdamicAdar(trainingGraph: Graph, testEdges: [NodeId, NodeId][], nonEdges: [NodeId, NodeId][], options?: LinkPredictionOptions): {
     precision: number;
@@ -43,6 +64,11 @@ export declare function evaluateAdamicAdar(trainingGraph: Graph, testEdges: [Nod
 };
 /**
  * Compare Adamic-Adar with Common Neighbors for the same dataset
+ * @param graph - The input graph
+ * @param testEdges - Array of node pairs that are actual edges
+ * @param nonEdges - Array of node pairs that are not edges
+ * @param options - Link prediction options
+ * @returns Comparison of evaluation metrics for both algorithms
  */
 export declare function compareAdamicAdarWithCommonNeighbors(graph: Graph, testEdges: [NodeId, NodeId][], nonEdges: [NodeId, NodeId][], options?: LinkPredictionOptions): {
     adamicAdar: ReturnType<typeof evaluateAdamicAdar>;

package/dist/src/link-prediction/adamic-adar.d.ts.map

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package/dist/src/link-prediction/adamic-adar.js

@@ -14,6 +14,11 @@ import { getCommonNeighbors, getIntermediateNodes } from "../utils/graph-utiliti
  */
 /**
  * Calculate Adamic-Adar index for a pair of nodes
+ * @param graph - The input graph
+ * @param source - The source node ID
+ * @param target - The target node ID
+ * @param options - Link prediction options
+ * @returns The Adamic-Adar score for the node pair
  */
 export function adamicAdarScore(graph, source, target, options = {}) {
     if (!graph.hasNode(source) || !graph.hasNode(target)) {
@@ -22,15 +27,15 @@ export function adamicAdarScore(graph, source, target, options = {}) {
     const { directed = false } = options;
     // Use utility function to get common neighbors
     // For directed graphs, we want intermediate nodes that form paths source->X->target
-    const commonNeighborsSet = directed ?
-        getIntermediateNodes(graph, source, target) :
-        getCommonNeighbors(graph, source, target, false);
+    const commonNeighborsSet = directed
+        ? getIntermediateNodes(graph, source, target)
+        : getCommonNeighbors(graph, source, target, false);
     // Calculate Adamic-Adar score
     let score = 0;
     for (const neighbor of commonNeighborsSet) {
-        const degree = directed ?
-            graph.outDegree(neighbor) : // Use out-degree for directed graphs
-            graph.degree(neighbor); // Use total degree for undirected graphs
+        const degree = directed
+            ? graph.outDegree(neighbor) // Use out-degree for directed graphs
+            : graph.degree(neighbor); // Use total degree for undirected graphs
         if (degree > 1) {
             score += 1 / Math.log(degree);
         }
@@ -43,9 +48,12 @@ export function adamicAdarScore(graph, source, target, options = {}) {
 }
 /**
  * Calculate Adamic-Adar scores for all possible node pairs
+ * @param graph - The input graph
+ * @param options - Link prediction options
+ * @returns Array of link prediction scores sorted by score descending
  */
 export function adamicAdarPrediction(graph, options = {}) {
-    const { directed = false, includeExisting = false, topK, } = options;
+    const { directed = false, includeExisting = false, topK } = options;
     const scores = [];
     const nodes = Array.from(graph.nodes()).map((n) => n.id);
     for (let i = 0; i < nodes.length; i++) {
@@ -79,6 +87,10 @@ export function adamicAdarPrediction(graph, options = {}) {
 }
 /**
  * Calculate Adamic-Adar scores for specific node pairs
+ * @param graph - The input graph
+ * @param pairs - Array of node ID pairs to calculate scores for
+ * @param options - Link prediction options
+ * @returns Array of link prediction scores for the specified pairs
  */
 export function adamicAdarForPairs(graph, pairs, options = {}) {
     return pairs.map(([source, target]) => ({
@@ -89,12 +101,16 @@ export function adamicAdarForPairs(graph, pairs, options = {}) {
 }
 /**
  * Get top Adamic-Adar candidates for link prediction for a specific node
+ * @param graph - The input graph
+ * @param node - The node ID to get candidates for
+ * @param options - Link prediction options with optional candidate list
+ * @returns Array of top link prediction candidates sorted by score descending
  */
 export function getTopAdamicAdarCandidatesForNode(graph, node, options = {}) {
     if (!graph.hasNode(node)) {
         return [];
     }
-    const { directed = false, includeExisting = false, topK = 10, candidates, } = options;
+    const { directed = false, includeExisting = false, topK = 10, candidates } = options;
     const scores = [];
     const targetNodes = candidates ?? Array.from(graph.nodes()).map((n) => n.id);
     for (const target of targetNodes) {
@@ -116,6 +132,11 @@ export function getTopAdamicAdarCandidatesForNode(graph, node, options = {}) {
 }
 /**
  * Calculate precision and recall for Adamic-Adar link prediction evaluation
+ * @param trainingGraph - The training graph without test edges
+ * @param testEdges - Array of node pairs that are actual edges
+ * @param nonEdges - Array of node pairs that are not edges
+ * @param options - Link prediction options
+ * @returns Evaluation metrics including precision, recall, F1 score, and AUC
  */
 export function evaluateAdamicAdar(trainingGraph, testEdges, nonEdges, options = {}) {
     // Get scores for test edges and non-edges
@@ -142,7 +163,7 @@ export function evaluateAdamicAdar(trainingGraph, testEdges, nonEdges, options =
         }
         const precision = truePositives / (truePositives + falsePositives);
         const recall = truePositives / totalPositives;
-        const f1 = precision + recall > 0 ? 2 * (precision * recall) / (precision + recall) : 0;
+        const f1 = precision + recall > 0 ? (2 * (precision * recall)) / (precision + recall) : 0;
         if (f1 > bestF1) {
             bestF1 = f1;
             bestPrecision = precision;
@@ -177,6 +198,11 @@ export function evaluateAdamicAdar(trainingGraph, testEdges, nonEdges, options =
 }
 /**
  * Compare Adamic-Adar with Common Neighbors for the same dataset
+ * @param graph - The input graph
+ * @param testEdges - Array of node pairs that are actual edges
+ * @param nonEdges - Array of node pairs that are not edges
+ * @param options - Link prediction options
+ * @returns Comparison of evaluation metrics for both algorithms
  */
 export function compareAdamicAdarWithCommonNeighbors(graph, testEdges, nonEdges, options = {}) {
     // Import common neighbors evaluation function
@@ -207,7 +233,7 @@ export function compareAdamicAdarWithCommonNeighbors(graph, testEdges, nonEdges,
         }
         const precision = truePositives / (truePositives + falsePositives);
         const recall = truePositives / totalPositives;
-        const f1 = precision + recall > 0 ? 2 * (precision * recall) / (precision + recall) : 0;
+        const f1 = precision + recall > 0 ? (2 * (precision * recall)) / (precision + recall) : 0;
         if (f1 > bestF1) {
             bestF1 = f1;
             bestPrecision = precision;

package/dist/src/link-prediction/adamic-adar.js.map

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