@graphty/algorithms 1.0.1 → 1.1.0

package/dist/src/algorithms/shortest-path/floyd-warshall.js

@@ -0,0 +1,129 @@
+export function floydWarshall(graph) {
+    const nodes = Array.from(graph.nodes()).map((n) => n.id);
+    const distances = new Map();
+    const predecessors = new Map();
+    for (const node of nodes) {
+        distances.set(node, new Map());
+        predecessors.set(node, new Map());
+        const nodeDistances = distances.get(node);
+        const nodePredecessors = predecessors.get(node);
+        if (!nodeDistances || !nodePredecessors) {
+            continue;
+        }
+        for (const other of nodes) {
+            if (node === other) {
+                nodeDistances.set(other, 0);
+                nodePredecessors.set(other, null);
+            }
+            else {
+                nodeDistances.set(other, Infinity);
+                nodePredecessors.set(other, null);
+            }
+        }
+    }
+    for (const edge of Array.from(graph.edges())) {
+        const weight = edge.weight ?? 1;
+        const sourceDistances = distances.get(edge.source);
+        const sourcePredecessors = predecessors.get(edge.source);
+        if (sourceDistances && sourcePredecessors) {
+            sourceDistances.set(edge.target, weight);
+            sourcePredecessors.set(edge.target, edge.source);
+        }
+        if (!graph.isDirected) {
+            const targetDistances = distances.get(edge.target);
+            const targetPredecessors = predecessors.get(edge.target);
+            if (targetDistances && targetPredecessors) {
+                targetDistances.set(edge.source, weight);
+                targetPredecessors.set(edge.source, edge.target);
+            }
+        }
+    }
+    for (const k of nodes) {
+        for (const i of nodes) {
+            for (const j of nodes) {
+                const distancesI = distances.get(i);
+                const distancesK = distances.get(k);
+                const predecessorsI = predecessors.get(i);
+                const predecessorsK = predecessors.get(k);
+                if (!distancesI || !distancesK || !predecessorsI || !predecessorsK) {
+                    continue;
+                }
+                const distIK = distancesI.get(k);
+                const distKJ = distancesK.get(j);
+                const distIJ = distancesI.get(j);
+                if (distIK === undefined || distKJ === undefined || distIJ === undefined) {
+                    continue;
+                }
+                if (distIK + distKJ < distIJ) {
+                    distancesI.set(j, distIK + distKJ);
+                    const predKJ = predecessorsK.get(j);
+                    predecessorsI.set(j, predKJ ?? null);
+                }
+            }
+        }
+    }
+    let hasNegativeCycle = false;
+    for (const node of nodes) {
+        const nodeDistances = distances.get(node);
+        if (!nodeDistances) {
+            continue;
+        }
+        const selfDistance = nodeDistances.get(node);
+        if (selfDistance !== undefined && selfDistance < 0) {
+            hasNegativeCycle = true;
+            break;
+        }
+    }
+    return {
+        distances,
+        predecessors,
+        hasNegativeCycle,
+    };
+}
+export function floydWarshallPath(graph, source, target) {
+    const result = floydWarshall(graph);
+    if (!graph.hasNode(source) || !graph.hasNode(target)) {
+        return null;
+    }
+    const sourceDistances = result.distances.get(source);
+    if (!sourceDistances) {
+        return null;
+    }
+    const distance = sourceDistances.get(target);
+    if (distance === undefined || distance === Infinity) {
+        return null;
+    }
+    const path = [];
+    let current = target;
+    while (current !== null && current !== source) {
+        path.unshift(current);
+        const sourcePredecessors = result.predecessors.get(source);
+        if (!sourcePredecessors) {
+            return null;
+        }
+        current = sourcePredecessors.get(current) ?? null;
+        if (path.length > graph.nodeCount) {
+            return null;
+        }
+    }
+    if (current === source) {
+        path.unshift(source);
+        return { path, distance };
+    }
+    return null;
+}
+export function transitiveClosure(graph) {
+    const result = floydWarshall(graph);
+    const closure = new Map();
+    for (const [source, distances] of Array.from(result.distances)) {
+        const reachable = new Set();
+        for (const [target, distance] of Array.from(distances)) {
+            if (distance < Infinity) {
+                reachable.add(target);
+            }
+        }
+        closure.set(source, reachable);
+    }
+    return closure;
+}
+//# sourceMappingURL=floyd-warshall.js.map

package/dist/src/algorithms/shortest-path/floyd-warshall.js.map

@@ -0,0 +1 @@
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package/dist/src/algorithms/shortest-path/index.d.ts

@@ -4,4 +4,6 @@
 export type { BellmanFordOptions, BellmanFordResult } from "./bellman-ford.js";
 export { bellmanFord, bellmanFordPath, hasNegativeCycle } from "./bellman-ford.js";
 export { allPairsShortestPath, dijkstra, dijkstraPath, singleSourceShortestPath } from "./dijkstra.js";
+export type { FloydWarshallResult } from "./floyd-warshall.js";
+export { floydWarshall, floydWarshallPath, transitiveClosure } from "./floyd-warshall.js";
 //# sourceMappingURL=index.d.ts.map

package/dist/src/algorithms/shortest-path/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../../src/algorithms/shortest-path/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,YAAY,EAAC,kBAAkB,EAAE,iBAAiB,EAAC,MAAM,mBAAmB,CAAC;AAC7E,OAAO,EAAC,WAAW,EAAE,eAAe,EAAE,gBAAgB,EAAC,MAAM,mBAAmB,CAAC;AACjF,OAAO,EAAC,oBAAoB,EAAE,QAAQ,EAAE,YAAY,EAAE,wBAAwB,EAAC,MAAM,eAAe,CAAC;AACrG,YAAY,EAAC,mBAAmB,EAAC,MAAM,qBAAqB,CAAC;AAC7D,OAAO,EAAC,aAAa,EAAE,iBAAiB,EAAE,iBAAiB,EAAC,MAAM,qBAAqB,CAAC"}

package/dist/src/algorithms/shortest-path/index.js

@@ -3,4 +3,5 @@
  */
 export { bellmanFord, bellmanFordPath, hasNegativeCycle } from "./bellman-ford.js";
 export { allPairsShortestPath, dijkstra, dijkstraPath, singleSourceShortestPath } from "./dijkstra.js";
+export { floydWarshall, floydWarshallPath, transitiveClosure } from "./floyd-warshall.js";
 //# sourceMappingURL=index.js.map

package/dist/src/algorithms/shortest-path/index.js.map

@@ -1 +1 @@
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package/dist/src/algorithms/traversal/bfs.js

@@ -143,7 +143,7 @@ export function isBipartite(graph) {
     const color = new Map();
     const visited = new Set();
     // Check each connected component
-    for (const node of graph.nodes()) {
+    for (const node of Array.from(graph.nodes())) {
         if (!visited.has(node.id)) {
             const queue = [node.id];
             color.set(node.id, 0);
@@ -157,7 +157,7 @@ export function isBipartite(graph) {
                 if (currentColor === undefined) {
                     continue;
                 }
-                for (const neighbor of graph.neighbors(current)) {
+                for (const neighbor of Array.from(graph.neighbors(current))) {
                     if (!visited.has(neighbor)) {
                         // Color with opposite color
                         color.set(neighbor, currentColor === 0 ? 1 : 0);

package/dist/src/algorithms/traversal/bfs.js.map

@@ -1 +1 @@
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package/dist/src/algorithms/traversal/dfs.js

@@ -75,7 +75,7 @@ function dfsRecursive(graph, node, visited, order, tree, options, depth, parent
         }
     }
     // Recursively visit neighbors
-    for (const neighbor of graph.neighbors(node)) {
+    for (const neighbor of Array.from(graph.neighbors(node))) {
         if (!visited.has(neighbor)) {
             dfsRecursive(graph, neighbor, visited, order, tree, options, depth + 1, node);
         }
@@ -94,7 +94,7 @@ function dfsRecursive(graph, node, visited, order, tree, options, depth, parent
 export function hasCycleDFS(graph) {
     const visited = new Set();
     // Check each unvisited node for cycles
-    for (const node of graph.nodes()) {
+    for (const node of Array.from(graph.nodes())) {
         if (!visited.has(node.id)) {
             if (graph.isDirected) {
                 const recursionStack = new Set();
@@ -118,7 +118,7 @@ function hasCycleUtilDirected(graph, node, visited, recursionStack) {
     visited.add(node);
     recursionStack.add(node);
     // Check all neighbors
-    for (const neighbor of graph.neighbors(node)) {
+    for (const neighbor of Array.from(graph.neighbors(node))) {
         if (!visited.has(neighbor)) {
             if (hasCycleUtilDirected(graph, neighbor, visited, recursionStack)) {
                 return true;
@@ -138,7 +138,7 @@ function hasCycleUtilDirected(graph, node, visited, recursionStack) {
 function hasCycleUtilUndirected(graph, node, visited, parent) {
     visited.add(node);
     // Check all neighbors
-    for (const neighbor of graph.neighbors(node)) {
+    for (const neighbor of Array.from(graph.neighbors(node))) {
         if (!visited.has(neighbor)) {
             if (hasCycleUtilUndirected(graph, neighbor, visited, node)) {
                 return true;
@@ -165,7 +165,7 @@ export function topologicalSort(graph) {
     const visited = new Set();
     const stack = [];
     // Perform DFS from each unvisited node
-    for (const node of graph.nodes()) {
+    for (const node of Array.from(graph.nodes())) {
         if (!visited.has(node.id)) {
             topologicalSortUtil(graph, node.id, visited, stack);
         }
@@ -179,7 +179,7 @@ export function topologicalSort(graph) {
 function topologicalSortUtil(graph, node, visited, stack) {
     visited.add(node);
     // Visit all neighbors first
-    for (const neighbor of graph.neighbors(node)) {
+    for (const neighbor of Array.from(graph.neighbors(node))) {
         if (!visited.has(neighbor)) {
             topologicalSortUtil(graph, neighbor, visited, stack);
         }
@@ -197,7 +197,7 @@ export function findStronglyConnectedComponents(graph) {
     const visited = new Set();
     const finishOrder = [];
     // Step 1: Get nodes in order of finishing times
-    for (const node of graph.nodes()) {
+    for (const node of Array.from(graph.nodes())) {
         if (!visited.has(node.id)) {
             dfsFinishOrder(graph, node.id, visited, finishOrder);
         }
@@ -222,7 +222,7 @@ export function findStronglyConnectedComponents(graph) {
  */
 function dfsFinishOrder(graph, node, visited, finishOrder) {
     visited.add(node);
-    for (const neighbor of graph.neighbors(node)) {
+    for (const neighbor of Array.from(graph.neighbors(node))) {
         if (!visited.has(neighbor)) {
             dfsFinishOrder(graph, neighbor, visited, finishOrder);
         }
@@ -235,7 +235,7 @@ function dfsFinishOrder(graph, node, visited, finishOrder) {
 function dfsCollectComponent(graph, node, visited, component) {
     visited.add(node);
     component.push(node);
-    for (const neighbor of graph.neighbors(node)) {
+    for (const neighbor of Array.from(graph.neighbors(node))) {
         if (!visited.has(neighbor)) {
             dfsCollectComponent(graph, neighbor, visited, component);
         }
@@ -247,11 +247,11 @@ function dfsCollectComponent(graph, node, visited, component) {
 function createTransposeGraph(graph) {
     const transpose = new Graph({ directed: true });
     // Add all nodes
-    for (const node of graph.nodes()) {
+    for (const node of Array.from(graph.nodes())) {
         transpose.addNode(node.id, node.data);
     }
     // Add reverse edges
-    for (const edge of graph.edges()) {
+    for (const edge of Array.from(graph.edges())) {
         transpose.addEdge(edge.target, edge.source, edge.weight, edge.data);
     }
     return transpose;

package/dist/src/algorithms/traversal/dfs.js.map

@@ -1 +1 @@
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package/dist/src/clustering/hierarchical.d.ts

@@ -0,0 +1,48 @@
+/**
+ * Hierarchical Clustering Algorithm
+ *
+ * Builds a hierarchy of clusters through agglomeration (bottom-up)
+ * or division (top-down). Useful for understanding multi-scale
+ * structure in graphs.
+ */
+export interface ClusterNode<T> {
+    id: string;
+    members: Set<T>;
+    left?: ClusterNode<T> | undefined;
+    right?: ClusterNode<T> | undefined;
+    distance: number;
+    height: number;
+    trees?: ClusterNode<T>[] | undefined;
+}
+export interface HierarchicalClusteringResult<T> {
+    root: ClusterNode<T>;
+    dendrogram: ClusterNode<T>[];
+    clusters: Map<number, Set<T>[]>;
+}
+export type LinkageMethod = "single" | "complete" | "average" | "ward";
+/**
+ * Agglomerative hierarchical clustering
+ * Builds clusters bottom-up by merging closest pairs
+ *
+ * @param graph - Undirected graph
+ * @param linkage - Linkage method for cluster distance
+ * @returns Hierarchical clustering result
+ *
+ * Time Complexity: O(n³) naive, O(n² log n) with heap
+ * Space Complexity: O(n²)
+ */
+export declare function hierarchicalClustering<T>(graph: Map<T, Set<T>>, linkage?: LinkageMethod): HierarchicalClusteringResult<T>;
+/**
+ * Cut dendrogram at specified height to get clusters
+ */
+export declare function cutDendrogram<T>(root: ClusterNode<T>, height: number): Set<T>[];
+/**
+ * Cut dendrogram to get k clusters
+ */
+export declare function cutDendrogramKClusters<T>(root: ClusterNode<T>, k: number): Set<T>[];
+/**
+ * Compute modularity-based hierarchical clustering
+ * Uses modularity gain to decide merges
+ */
+export declare function modularityHierarchicalClustering<T>(graph: Map<T, Set<T>>): HierarchicalClusteringResult<T>;
+//# sourceMappingURL=hierarchical.d.ts.map

package/dist/src/clustering/hierarchical.d.ts.map

@@ -0,0 +1 @@
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