@gmod/cram 1.5.9 → 1.6.2

package/dist/rans/d14.js

@@ -1,96 +1,58 @@
 "use strict";
-
-var Constants = require('./constants');
-
-var Decoding = require('./decoding');
-
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+var constants_1 = require("./constants");
+var decoding_1 = __importDefault(require("./decoding"));
 function uncompress(
-/* ByteBuffer */
-input,
-/* ByteBuffer */
-output,
-/* Decoding.AriDecoder[] */
-D,
-/* Decoding.Symbol[][] */
-syms) {
-  var
-  /* int */
-  outputSize = output.remaining();
-  var rans0 = input.getInt();
-  var rans1 = input.getInt();
-  var rans2 = input.getInt();
-  var rans7 = input.getInt();
-  var
-  /* int */
-  isz4 = outputSize >> 2;
-  var
-  /* int */
-  i0 = 0;
-  var
-  /* int */
-  i1 = isz4;
-  var
-  /* int */
-  i2 = 2 * isz4;
-  var
-  /* int */
-  i7 = 3 * isz4;
-  var
-  /* int */
-  l0 = 0;
-  var
-  /* int */
-  l1 = 0;
-  var
-  /* int */
-  l2 = 0;
-  var
-  /* int */
-  l7 = 0;
-
-  for (; i0 < isz4; i0 += 1, i1 += 1, i2 += 1, i7 += 1) {
-    var
-    /* int */
-    c0 = 0xff & D[l0].R[Decoding.get(rans0, Constants.TF_SHIFT)];
-    var
-    /* int */
-    c1 = 0xff & D[l1].R[Decoding.get(rans1, Constants.TF_SHIFT)];
-    var
-    /* int */
-    c2 = 0xff & D[l2].R[Decoding.get(rans2, Constants.TF_SHIFT)];
-    var
-    /* int */
-    c7 = 0xff & D[l7].R[Decoding.get(rans7, Constants.TF_SHIFT)];
-    output.putAt(i0, c0);
-    output.putAt(i1, c1);
-    output.putAt(i2, c2);
-    output.putAt(i7, c7);
-    rans0 = Decoding.advanceSymbolStep(rans0, syms[l0][c0], Constants.TF_SHIFT);
-    rans1 = Decoding.advanceSymbolStep(rans1, syms[l1][c1], Constants.TF_SHIFT);
-    rans2 = Decoding.advanceSymbolStep(rans2, syms[l2][c2], Constants.TF_SHIFT);
-    rans7 = Decoding.advanceSymbolStep(rans7, syms[l7][c7], Constants.TF_SHIFT);
-    rans0 = Decoding.renormalize(rans0, input);
-    rans1 = Decoding.renormalize(rans1, input);
-    rans2 = Decoding.renormalize(rans2, input);
-    rans7 = Decoding.renormalize(rans7, input);
-    l0 = c0;
-    l1 = c1;
-    l2 = c2;
-    l7 = c7;
-  } // Remainder
-
-
-  for (; i7 < outputSize; i7 += 1) {
-    var
-    /* int */
-    _c = 0xff & D[l7].R[Decoding.get(rans7, Constants.TF_SHIFT)];
-
-    output.putAt(i7, _c);
-    rans7 = Decoding.advanceSymbol(rans7, input, syms[l7][_c], Constants.TF_SHIFT);
-    l7 = _c;
-  }
+/* ByteBuffer */ input, 
+/* ByteBuffer */ output, 
+/* Decoding.AriDecoder[] */ D, 
+/* Decoding.Symbol[][] */ syms) {
+    var /* int */ outputSize = output.remaining();
+    var rans0 = input.getInt();
+    var rans1 = input.getInt();
+    var rans2 = input.getInt();
+    var rans7 = input.getInt();
+    var /* int */ isz4 = outputSize >> 2;
+    var /* int */ i0 = 0;
+    var /* int */ i1 = isz4;
+    var /* int */ i2 = 2 * isz4;
+    var /* int */ i7 = 3 * isz4;
+    var /* int */ l0 = 0;
+    var /* int */ l1 = 0;
+    var /* int */ l2 = 0;
+    var /* int */ l7 = 0;
+    for (; i0 < isz4; i0 += 1, i1 += 1, i2 += 1, i7 += 1) {
+        var /* int */ c0 = 0xff & D[l0].R[decoding_1.default.get(rans0, constants_1.TF_SHIFT)];
+        var /* int */ c1 = 0xff & D[l1].R[decoding_1.default.get(rans1, constants_1.TF_SHIFT)];
+        var /* int */ c2 = 0xff & D[l2].R[decoding_1.default.get(rans2, constants_1.TF_SHIFT)];
+        var /* int */ c7 = 0xff & D[l7].R[decoding_1.default.get(rans7, constants_1.TF_SHIFT)];
+        output.putAt(i0, c0);
+        output.putAt(i1, c1);
+        output.putAt(i2, c2);
+        output.putAt(i7, c7);
+        rans0 = decoding_1.default.advanceSymbolStep(rans0, syms[l0][c0], constants_1.TF_SHIFT);
+        rans1 = decoding_1.default.advanceSymbolStep(rans1, syms[l1][c1], constants_1.TF_SHIFT);
+        rans2 = decoding_1.default.advanceSymbolStep(rans2, syms[l2][c2], constants_1.TF_SHIFT);
+        rans7 = decoding_1.default.advanceSymbolStep(rans7, syms[l7][c7], constants_1.TF_SHIFT);
+        rans0 = decoding_1.default.renormalize(rans0, input);
+        rans1 = decoding_1.default.renormalize(rans1, input);
+        rans2 = decoding_1.default.renormalize(rans2, input);
+        rans7 = decoding_1.default.renormalize(rans7, input);
+        l0 = c0;
+        l1 = c1;
+        l2 = c2;
+        l7 = c7;
+    }
+    // Remainder
+    for (; i7 < outputSize; i7 += 1) {
+        var /* int */ c7 = 0xff & D[l7].R[decoding_1.default.get(rans7, constants_1.TF_SHIFT)];
+        output.putAt(i7, c7);
+        rans7 = decoding_1.default.advanceSymbol(rans7, input, syms[l7][c7], constants_1.TF_SHIFT);
+        l7 = c7;
+    }
 }
-
-module.exports = {
-  uncompress: uncompress
-};
+exports.default = uncompress;
+//# sourceMappingURL=d14.js.map

package/dist/rans/d14.js.map

@@ -0,0 +1 @@
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package/dist/rans/decoding.d.ts

@@ -0,0 +1,30 @@
+export default Decode;
+declare namespace Decode {
+    export { FC };
+    export { AriDecoder };
+    export { Symbol };
+    export { symbolInit };
+    export { advanceStep };
+    export { advanceSymbolStep };
+    export { get };
+    export { advanceSymbol };
+    export { renormalize };
+}
+declare class FC {
+    F: any;
+    C: any;
+}
+declare class AriDecoder {
+    fc: any[];
+    R: any;
+}
+declare class Symbol {
+    start: any;
+    freq: any;
+}
+declare function symbolInit(sym: any, start: any, freq: any): void;
+declare function advanceStep(r: any, start: any, freq: any, scaleBits: any): number;
+declare function advanceSymbolStep(r: any, sym: any, scaleBits: any): number;
+declare function get(r: any, scaleBits: any): number;
+declare function advanceSymbol(r: any, pptr: any, sym: any, scaleBits: any): any;
+declare function renormalize(r: any, pptr: any): any;

package/dist/rans/decoding.js

@@ -1,170 +1,123 @@
 "use strict";
-
-var _interopRequireDefault = require("@babel/runtime-corejs3/helpers/interopRequireDefault");
-
-var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime-corejs3/helpers/classCallCheck"));
-
-var _require = require('../errors'),
-    CramMalformedError = _require.CramMalformedError;
-
-var Constants = require('./constants');
-
-var FC = // int F, C;
-function FC() {
-  (0, _classCallCheck2.default)(this, FC);
-  this.F = undefined;
-  this.C = undefined;
-};
-
-var AriDecoder = // final FC[] fc = new FC[256];
-// byte[] R;
-function AriDecoder() {
-  (0, _classCallCheck2.default)(this, AriDecoder);
-  this.fc = new Array(256);
-
-  for (var i = 0; i < this.fc.length; i += 1) {
-    this.fc[i] = new FC();
-  }
-
-  this.R = null;
-};
-
-var _Symbol = // int start; // Start of range.
-// int freq; // Symbol frequency.
-function _Symbol() {
-  (0, _classCallCheck2.default)(this, _Symbol);
-  this.start = undefined;
-  this.freq = undefined;
-}; // Initialize a decoder symbol to start "start" and frequency "freq"
-
-
+Object.defineProperty(exports, "__esModule", { value: true });
+var errors_1 = require("../errors");
+var constants_1 = require("./constants");
+var FC = /** @class */ (function () {
+    // int F, C;
+    function FC() {
+        this.F = undefined;
+        this.C = undefined;
+    }
+    return FC;
+}());
+var AriDecoder = /** @class */ (function () {
+    // final FC[] fc = new FC[256];
+    // byte[] R;
+    function AriDecoder() {
+        this.fc = new Array(256);
+        for (var i = 0; i < this.fc.length; i += 1) {
+            this.fc[i] = new FC();
+        }
+        this.R = null;
+    }
+    return AriDecoder;
+}());
+var Symbol = /** @class */ (function () {
+    // int start; // Start of range.
+    // int freq; // Symbol frequency.
+    function Symbol() {
+        this.start = undefined;
+        this.freq = undefined;
+    }
+    return Symbol;
+}());
+// Initialize a decoder symbol to start "start" and frequency "freq"
 function symbolInit(sym, start, freq) {
-  if (!(start <= 1 << 16)) throw new CramMalformedError("assertion failed: start <= 1<<16");
-  if (!(freq <= (1 << 16) - start)) throw new CramMalformedError("assertion failed: freq <= 1<<16");
-  sym.start = start;
-  sym.freq = freq;
-} // Advances in the bit stream by "popping" a single symbol with range start
+    if (!(start <= 1 << 16)) {
+        throw new errors_1.CramMalformedError("assertion failed: start <= 1<<16");
+    }
+    if (!(freq <= (1 << 16) - start)) {
+        throw new errors_1.CramMalformedError("assertion failed: freq <= 1<<16");
+    }
+    sym.start = start;
+    sym.freq = freq;
+}
+// Advances in the bit stream by "popping" a single symbol with range start
 // "start" and frequency "freq". All frequencies are assumed to sum to
 // "1 << scaleBits".
 // No renormalization or output happens.
-
-/* private static int */
-
-
-function advanceStep(
-/* final int */
-r,
-/* final int */
-start,
-/* final int */
-freq,
-/* final int */
-scaleBits) {
-  /* final int */
-  var mask = (1 << scaleBits) - 1; // s, x = D(x)
-
-  return freq * (r >> scaleBits) + (r & mask) - start;
-} // Equivalent to RansDecAdvanceStep that takes a symbol.
-
-/* static int  */
-
-
-function advanceSymbolStep(
-/* final int */
-r,
-/* final RansDecSymbol */
-sym,
-/* final int */
-scaleBits) {
-  return advanceStep(r, sym.start, sym.freq, scaleBits);
-} // Returns the current cumulative frequency (map it to a symbol yourself!)
-
-/* static int */
-
-
-function get(
-/* final int */
-r,
-/* final int */
-scaleBits) {
-  return r & (1 << scaleBits) - 1;
-} // Advances in the bit stream by "popping" a single symbol with range start
+/* private static int */ function advanceStep(
+/* final int */ r, 
+/* final int */ start, 
+/* final int */ freq, 
+/* final int */ scaleBits) {
+    /* final int */ var mask = (1 << scaleBits) - 1;
+    // s, x = D(x)
+    return freq * (r >> scaleBits) + (r & mask) - start;
+}
+// Equivalent to RansDecAdvanceStep that takes a symbol.
+/* static int  */ function advanceSymbolStep(
+/* final int */ r, 
+/* final RansDecSymbol */ sym, 
+/* final int */ scaleBits) {
+    return advanceStep(r, sym.start, sym.freq, scaleBits);
+}
+// Returns the current cumulative frequency (map it to a symbol yourself!)
+/* static int */ function get(/* final int */ r, /* final int */ scaleBits) {
+    return r & ((1 << scaleBits) - 1);
+}
+// Advances in the bit stream by "popping" a single symbol with range start
 // "start" and frequency "freq". All frequencies are assumed to sum to
 // "1 << scaleBits",
 // and the resulting bytes get written to ptr (which is updated).
-
-/* private static int */
-
-
-function advance(
-/* int */
-r,
-/* final ByteBuffer */
-pptr,
-/* final int */
-start,
-/* final int */
-freq,
-/* final int */
-scaleBits) {
-  /* final int */
-  var mask = (1 << scaleBits) - 1; // s, x = D(x)
-
-  r = freq * (r >> scaleBits) + (r & mask) - start; // re-normalize
-
-  if (r < Constants.RANS_BYTE_L) {
-    do {
-      /* final int */
-      var b = 0xff & pptr.get();
-      r = r << 8 | b;
-    } while (r < Constants.RANS_BYTE_L);
-  }
-
-  return r;
-} // Equivalent to RansDecAdvance that takes a symbol.
-
-/*  static int */
-
-
-function advanceSymbol(
-/* final int */
-r,
-/* final ByteBuffer */
-pptr,
-/* final RansDecSymbol */
-sym,
-/* final int */
-scaleBits) {
-  return advance(r, pptr, sym.start, sym.freq, scaleBits);
-} // Re-normalize.
-
-/*  static int */
-
-
-function renormalize(
-/* int */
-r,
-/* final ByteBuffer */
-pptr) {
-  // re-normalize
-  if (r < Constants.RANS_BYTE_L) {
-    do {
-      r = r << 8 | 0xff & pptr.get();
-    } while (r < Constants.RANS_BYTE_L);
-  }
-
-  return r;
+/* private static int */ function advance(
+/* int */ r, 
+/* final ByteBuffer */ pptr, 
+/* final int */ start, 
+/* final int */ freq, 
+/* final int */ scaleBits) {
+    /* final int */ var mask = (1 << scaleBits) - 1;
+    // s, x = D(x)
+    r = freq * (r >> scaleBits) + (r & mask) - start;
+    // re-normalize
+    if (r < constants_1.RANS_BYTE_L) {
+        do {
+            /* final int */ var b = 0xff & pptr.get();
+            r = (r << 8) | b;
+        } while (r < constants_1.RANS_BYTE_L);
+    }
+    return r;
+}
+// Equivalent to RansDecAdvance that takes a symbol.
+/*  static int */ function advanceSymbol(
+/* final int */ r, 
+/* final ByteBuffer */ pptr, 
+/* final RansDecSymbol */ sym, 
+/* final int */ scaleBits) {
+    return advance(r, pptr, sym.start, sym.freq, scaleBits);
+}
+// Re-normalize.
+/*  static int */ function renormalize(
+/* int */ r, 
+/* final ByteBuffer */ pptr) {
+    // re-normalize
+    if (r < constants_1.RANS_BYTE_L) {
+        do {
+            r = (r << 8) | (0xff & pptr.get());
+        } while (r < constants_1.RANS_BYTE_L);
+    }
+    return r;
 }
-
 var Decode = {
-  FC: FC,
-  AriDecoder: AriDecoder,
-  Symbol: _Symbol,
-  symbolInit: symbolInit,
-  advanceStep: advanceStep,
-  advanceSymbolStep: advanceSymbolStep,
-  get: get,
-  advanceSymbol: advanceSymbol,
-  renormalize: renormalize
+    FC: FC,
+    AriDecoder: AriDecoder,
+    Symbol: Symbol,
+    symbolInit: symbolInit,
+    advanceStep: advanceStep,
+    advanceSymbolStep: advanceSymbolStep,
+    get: get,
+    advanceSymbol: advanceSymbol,
+    renormalize: renormalize,
 };
-module.exports = Decode;
+exports.default = Decode;
+//# sourceMappingURL=decoding.js.map

package/dist/rans/decoding.js.map

@@ -0,0 +1 @@
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package/dist/rans/frequencies.d.ts

@@ -0,0 +1,2 @@
+export function readStatsO0(cp: any, decoder: any, syms: any): void;
+export function readStatsO1(cp: any, D: any, syms: any): void;