@gmod/cram 1.5.9 → 1.6.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (258) hide show
  1. package/CHANGELOG.md +90 -0
  2. package/README.md +182 -172
  3. package/dist/craiIndex.d.ts +37 -0
  4. package/dist/craiIndex.js +196 -301
  5. package/dist/craiIndex.js.map +1 -0
  6. package/dist/cram-bundle.js +6 -15
  7. package/dist/cramFile/codecs/_base.d.ts +6 -0
  8. package/dist/cramFile/codecs/_base.js +44 -53
  9. package/dist/cramFile/codecs/_base.js.map +1 -0
  10. package/dist/cramFile/codecs/beta.d.ts +4 -0
  11. package/dist/cramFile/codecs/beta.js +38 -48
  12. package/dist/cramFile/codecs/beta.js.map +1 -0
  13. package/dist/cramFile/codecs/byteArrayLength.d.ts +8 -0
  14. package/dist/cramFile/codecs/byteArrayLength.js +58 -78
  15. package/dist/cramFile/codecs/byteArrayLength.js.map +1 -0
  16. package/dist/cramFile/codecs/byteArrayStop.d.ts +6 -0
  17. package/dist/cramFile/codecs/byteArrayStop.js +62 -76
  18. package/dist/cramFile/codecs/byteArrayStop.js.map +1 -0
  19. package/dist/cramFile/codecs/external.d.ts +7 -0
  20. package/dist/cramFile/codecs/external.js +63 -81
  21. package/dist/cramFile/codecs/external.js.map +1 -0
  22. package/dist/cramFile/codecs/gamma.d.ts +4 -0
  23. package/dist/cramFile/codecs/gamma.js +43 -56
  24. package/dist/cramFile/codecs/gamma.js.map +1 -0
  25. package/dist/cramFile/codecs/huffman.d.ts +17 -0
  26. package/dist/cramFile/codecs/huffman.js +126 -199
  27. package/dist/cramFile/codecs/huffman.js.map +1 -0
  28. package/dist/cramFile/codecs/index.d.ts +2 -0
  29. package/dist/cramFile/codecs/index.js +31 -38
  30. package/dist/cramFile/codecs/index.js.map +1 -0
  31. package/dist/cramFile/codecs/subexp.d.ts +4 -0
  32. package/dist/cramFile/codecs/subexp.js +51 -64
  33. package/dist/cramFile/codecs/subexp.js.map +1 -0
  34. package/dist/cramFile/constants.d.ts +36 -0
  35. package/dist/cramFile/constants.js +52 -50
  36. package/dist/cramFile/constants.js.map +1 -0
  37. package/dist/cramFile/container/compressionScheme.d.ts +23 -0
  38. package/dist/cramFile/container/compressionScheme.js +115 -153
  39. package/dist/cramFile/container/compressionScheme.js.map +1 -0
  40. package/dist/cramFile/container/index.d.ts +13 -0
  41. package/dist/cramFile/container/index.js +169 -283
  42. package/dist/cramFile/container/index.js.map +1 -0
  43. package/dist/cramFile/file.d.ts +63 -0
  44. package/dist/cramFile/file.js +440 -766
  45. package/dist/cramFile/file.js.map +1 -0
  46. package/dist/cramFile/index.d.ts +2 -0
  47. package/dist/cramFile/index.js +7 -4
  48. package/dist/cramFile/index.js.map +1 -0
  49. package/dist/cramFile/record.d.ts +79 -0
  50. package/dist/cramFile/record.js +253 -308
  51. package/dist/cramFile/record.js.map +1 -0
  52. package/dist/cramFile/sectionParsers.d.ts +18 -0
  53. package/dist/cramFile/sectionParsers.js +324 -362
  54. package/dist/cramFile/sectionParsers.js.map +1 -0
  55. package/dist/cramFile/slice/decodeRecord.d.ts +2 -0
  56. package/dist/cramFile/slice/decodeRecord.js +278 -298
  57. package/dist/cramFile/slice/decodeRecord.js.map +1 -0
  58. package/dist/cramFile/slice/index.d.ts +20 -0
  59. package/dist/cramFile/slice/index.js +488 -789
  60. package/dist/cramFile/slice/index.js.map +1 -0
  61. package/dist/cramFile/util.d.ts +5 -0
  62. package/dist/cramFile/util.js +158 -144
  63. package/dist/cramFile/util.js.map +1 -0
  64. package/dist/errors.d.ts +23 -0
  65. package/dist/errors.js +66 -103
  66. package/dist/errors.js.map +1 -0
  67. package/dist/index.d.ts +4 -0
  68. package/dist/index.js +12 -12
  69. package/dist/index.js.map +1 -0
  70. package/dist/indexedCramFile.d.ts +39 -0
  71. package/dist/indexedCramFile.js +213 -315
  72. package/dist/indexedCramFile.js.map +1 -0
  73. package/dist/io/bufferCache.d.ts +12 -0
  74. package/dist/io/bufferCache.js +108 -128
  75. package/dist/io/bufferCache.js.map +1 -0
  76. package/dist/io/index.d.ts +5 -0
  77. package/dist/io/index.js +29 -27
  78. package/dist/io/index.js.map +1 -0
  79. package/dist/io/localFile.d.ts +10 -0
  80. package/dist/io/localFile.js +105 -162
  81. package/dist/io/localFile.js.map +1 -0
  82. package/dist/io/remoteFile.d.ts +16 -0
  83. package/dist/io/remoteFile.js +137 -206
  84. package/dist/io/remoteFile.js.map +1 -0
  85. package/dist/rans/constants.d.ts +3 -0
  86. package/dist/rans/constants.js +6 -6
  87. package/dist/rans/constants.js.map +1 -0
  88. package/dist/rans/d04.d.ts +1 -0
  89. package/dist/rans/d04.js +70 -99
  90. package/dist/rans/d04.js.map +1 -0
  91. package/dist/rans/d14.d.ts +1 -0
  92. package/dist/rans/d14.js +55 -93
  93. package/dist/rans/d14.js.map +1 -0
  94. package/dist/rans/decoding.d.ts +30 -0
  95. package/dist/rans/decoding.js +112 -159
  96. package/dist/rans/decoding.js.map +1 -0
  97. package/dist/rans/frequencies.d.ts +2 -0
  98. package/dist/rans/frequencies.js +110 -119
  99. package/dist/rans/frequencies.js.map +1 -0
  100. package/dist/rans/index.d.ts +1 -0
  101. package/dist/rans/index.js +111 -174
  102. package/dist/rans/index.js.map +1 -0
  103. package/dist/sam.d.ts +1 -0
  104. package/dist/sam.js +16 -41
  105. package/dist/sam.js.map +1 -0
  106. package/dist/unzip-pako.d.ts +2 -0
  107. package/dist/unzip-pako.js +9 -0
  108. package/dist/unzip-pako.js.map +1 -0
  109. package/dist/unzip.d.ts +2 -0
  110. package/dist/unzip.js +6 -0
  111. package/dist/unzip.js.map +1 -0
  112. package/errors.js +66 -103
  113. package/esm/craiIndex.d.ts +37 -0
  114. package/esm/craiIndex.js +158 -0
  115. package/esm/craiIndex.js.map +1 -0
  116. package/esm/cramFile/codecs/_base.d.ts +6 -0
  117. package/esm/cramFile/codecs/_base.js +42 -0
  118. package/esm/cramFile/codecs/_base.js.map +1 -0
  119. package/esm/cramFile/codecs/beta.d.ts +4 -0
  120. package/esm/cramFile/codecs/beta.js +15 -0
  121. package/esm/cramFile/codecs/beta.js.map +1 -0
  122. package/esm/cramFile/codecs/byteArrayLength.d.ts +8 -0
  123. package/esm/cramFile/codecs/byteArrayLength.js +35 -0
  124. package/esm/cramFile/codecs/byteArrayLength.js.map +1 -0
  125. package/esm/cramFile/codecs/byteArrayStop.d.ts +6 -0
  126. package/esm/cramFile/codecs/byteArrayStop.js +40 -0
  127. package/esm/cramFile/codecs/byteArrayStop.js.map +1 -0
  128. package/esm/cramFile/codecs/external.d.ts +7 -0
  129. package/esm/cramFile/codecs/external.js +40 -0
  130. package/esm/cramFile/codecs/external.js.map +1 -0
  131. package/esm/cramFile/codecs/gamma.d.ts +4 -0
  132. package/esm/cramFile/codecs/gamma.js +20 -0
  133. package/esm/cramFile/codecs/gamma.js.map +1 -0
  134. package/esm/cramFile/codecs/huffman.d.ts +17 -0
  135. package/esm/cramFile/codecs/huffman.js +107 -0
  136. package/esm/cramFile/codecs/huffman.js.map +1 -0
  137. package/esm/cramFile/codecs/index.d.ts +2 -0
  138. package/esm/cramFile/codecs/index.js +30 -0
  139. package/esm/cramFile/codecs/index.js.map +1 -0
  140. package/esm/cramFile/codecs/subexp.d.ts +4 -0
  141. package/esm/cramFile/codecs/subexp.js +28 -0
  142. package/esm/cramFile/codecs/subexp.js.map +1 -0
  143. package/esm/cramFile/constants.d.ts +36 -0
  144. package/esm/cramFile/constants.js +51 -0
  145. package/esm/cramFile/constants.js.map +1 -0
  146. package/esm/cramFile/container/compressionScheme.d.ts +23 -0
  147. package/esm/cramFile/container/compressionScheme.js +123 -0
  148. package/esm/cramFile/container/compressionScheme.js.map +1 -0
  149. package/esm/cramFile/container/index.d.ts +13 -0
  150. package/esm/cramFile/container/index.js +84 -0
  151. package/esm/cramFile/container/index.js.map +1 -0
  152. package/esm/cramFile/file.d.ts +63 -0
  153. package/esm/cramFile/file.js +281 -0
  154. package/esm/cramFile/file.js.map +1 -0
  155. package/esm/cramFile/index.d.ts +2 -0
  156. package/esm/cramFile/index.js +3 -0
  157. package/esm/cramFile/index.js.map +1 -0
  158. package/esm/cramFile/record.d.ts +79 -0
  159. package/esm/cramFile/record.js +297 -0
  160. package/esm/cramFile/record.js.map +1 -0
  161. package/esm/cramFile/sectionParsers.d.ts +18 -0
  162. package/esm/cramFile/sectionParsers.js +347 -0
  163. package/esm/cramFile/sectionParsers.js.map +1 -0
  164. package/esm/cramFile/slice/decodeRecord.d.ts +2 -0
  165. package/esm/cramFile/slice/decodeRecord.js +299 -0
  166. package/esm/cramFile/slice/decodeRecord.js.map +1 -0
  167. package/esm/cramFile/slice/index.d.ts +20 -0
  168. package/esm/cramFile/slice/index.js +364 -0
  169. package/esm/cramFile/slice/index.js.map +1 -0
  170. package/esm/cramFile/util.d.ts +5 -0
  171. package/esm/cramFile/util.js +161 -0
  172. package/esm/cramFile/util.js.map +1 -0
  173. package/esm/errors.d.ts +23 -0
  174. package/esm/errors.js +24 -0
  175. package/esm/errors.js.map +1 -0
  176. package/esm/index.d.ts +4 -0
  177. package/esm/index.js +5 -0
  178. package/esm/index.js.map +1 -0
  179. package/esm/indexedCramFile.d.ts +39 -0
  180. package/esm/indexedCramFile.js +155 -0
  181. package/esm/indexedCramFile.js.map +1 -0
  182. package/esm/io/bufferCache.d.ts +12 -0
  183. package/esm/io/bufferCache.js +54 -0
  184. package/esm/io/bufferCache.js.map +1 -0
  185. package/esm/io/index.d.ts +5 -0
  186. package/esm/io/index.js +24 -0
  187. package/esm/io/index.js.map +1 -0
  188. package/esm/io/localFile.d.ts +10 -0
  189. package/esm/io/localFile.js +31 -0
  190. package/esm/io/localFile.js.map +1 -0
  191. package/esm/io/remoteFile.d.ts +16 -0
  192. package/esm/io/remoteFile.js +64 -0
  193. package/esm/io/remoteFile.js.map +1 -0
  194. package/esm/rans/constants.d.ts +3 -0
  195. package/esm/rans/constants.js +5 -0
  196. package/esm/rans/constants.js.map +1 -0
  197. package/esm/rans/d04.d.ts +1 -0
  198. package/esm/rans/d04.js +67 -0
  199. package/esm/rans/d04.js.map +1 -0
  200. package/esm/rans/d14.d.ts +1 -0
  201. package/esm/rans/d14.js +52 -0
  202. package/esm/rans/d14.js.map +1 -0
  203. package/esm/rans/decoding.d.ts +30 -0
  204. package/esm/rans/decoding.js +118 -0
  205. package/esm/rans/decoding.js.map +1 -0
  206. package/esm/rans/frequencies.d.ts +2 -0
  207. package/esm/rans/frequencies.js +110 -0
  208. package/esm/rans/frequencies.js.map +1 -0
  209. package/esm/rans/index.d.ts +1 -0
  210. package/esm/rans/index.js +195 -0
  211. package/esm/rans/index.js.map +1 -0
  212. package/esm/sam.d.ts +1 -0
  213. package/esm/sam.js +16 -0
  214. package/esm/sam.js.map +1 -0
  215. package/esm/unzip-pako.d.ts +2 -0
  216. package/esm/unzip-pako.js +5 -0
  217. package/esm/unzip-pako.js.map +1 -0
  218. package/esm/unzip.d.ts +2 -0
  219. package/esm/unzip.js +3 -0
  220. package/esm/unzip.js.map +1 -0
  221. package/package.json +38 -35
  222. package/src/craiIndex.js +180 -0
  223. package/src/cramFile/codecs/_base.js +49 -0
  224. package/src/cramFile/codecs/beta.js +23 -0
  225. package/src/cramFile/codecs/byteArrayLength.js +55 -0
  226. package/src/cramFile/codecs/byteArrayStop.js +50 -0
  227. package/src/cramFile/codecs/external.js +54 -0
  228. package/src/cramFile/codecs/gamma.js +30 -0
  229. package/src/cramFile/codecs/huffman.js +137 -0
  230. package/src/cramFile/codecs/index.js +38 -0
  231. package/src/cramFile/codecs/subexp.js +32 -0
  232. package/src/cramFile/constants.js +55 -0
  233. package/src/cramFile/container/compressionScheme.js +144 -0
  234. package/src/cramFile/container/index.js +119 -0
  235. package/src/cramFile/file.js +347 -0
  236. package/src/cramFile/index.js +3 -0
  237. package/src/cramFile/record.js +337 -0
  238. package/src/cramFile/sectionParsers.js +379 -0
  239. package/src/cramFile/slice/decodeRecord.js +362 -0
  240. package/src/cramFile/slice/index.js +497 -0
  241. package/src/cramFile/util.js +169 -0
  242. package/src/errors.js +22 -0
  243. package/src/index.js +5 -0
  244. package/src/indexedCramFile.js +191 -0
  245. package/src/io/bufferCache.js +66 -0
  246. package/src/io/index.js +26 -0
  247. package/src/io/localFile.js +35 -0
  248. package/src/io/remoteFile.js +71 -0
  249. package/src/rans/README.md +1 -0
  250. package/src/rans/constants.js +5 -0
  251. package/src/rans/d04.js +83 -0
  252. package/src/rans/d14.js +59 -0
  253. package/src/rans/decoding.js +141 -0
  254. package/src/rans/frequencies.js +121 -0
  255. package/src/rans/index.js +249 -0
  256. package/src/sam.js +15 -0
  257. package/src/unzip-pako.ts +5 -0
  258. package/src/unzip.ts +2 -0
package/dist/cramFile/slice/decodeRecord.js.map ADDED
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1
+ {"version":3,"file":"decodeRecord.js","sourceRoot":"","sources":["../../../src/cramFile/slice/decodeRecord.js"],"names":[],"mappings":";;;;;AAAA,8CAAuB;AACvB,uCAAyE;AACzE,qDAAkC;AAClC,2DAAoC;AACpC;;;GAGG;AACH,SAAS,kCAAkC,CAAC,MAAM;IAChD,IAAM,UAAU,GAAG,MAAM,CAAC,OAAO,CAAC,CAAC,CAAC,CAAA;IACpC,IAAI,UAAU,KAAK,CAAC,CAAC,EAAE;QACrB,OAAO,MAAM,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAA;KAC/B;IACD,OAAO,MAAM,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,EAAE,UAAU,CAAC,CAAA;AAC/C,CAAC;AAED;;;GAGG;AACH,SAAS,kBAAkB,CAAC,MAAM;IAChC,IAAM,SAAS,GAAG,MAAM,CAAC,YAAY,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAA;IAChD,IAAM,MAAM,GAAG,MAAM,CAAC,WAAW,CAAC,CAAC,CAAC,CAAA;IAEpC,IAAM,MAAM,GAAG;QACb,CAAC,EAAE,CAAC,UAAU,EAAE,CAAC,CAAC;QAClB,CAAC,EAAE,CAAC,WAAW,EAAE,CAAC,CAAC;QACnB,CAAC,EAAE,CAAC,aAAa,EAAE,CAAC,CAAC;QACrB,CAAC,EAAE,CAAC,cAAc,EAAE,CAAC,CAAC;QACtB,CAAC,EAAE,CAAC,aAAa,EAAE,CAAC,CAAC;QACrB,CAAC,EAAE,CAAC,cAAc,EAAE,CAAC,CAAC;QACtB,CAAC,EAAE,CAAC,aAAa,EAAE,CAAC,CAAC;KACtB,CAAC,SAAS,CAAC,CAAA;IACZ,IAAI,CAAC,MAAM,EAAE;QACX,MAAM,IAAI,2BAAkB,CAAC,wCAAiC,SAAS,MAAG,CAAC,CAAA;KAC5E;IAEM,IAAA,SAAS,GAAc,MAAM,GAApB,EAAE,QAAQ,GAAI,MAAM,GAAV,CAAU;IACpC,IAAM,KAAK,GAAG,IAAI,KAAK,CAAC,MAAM,CAAC,CAAA;IAC/B,IAAI,MAAM,GAAG,CAAC,CAAA;IACd,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,MAAM,EAAE,CAAC,IAAI,CAAC,EAAE;QAClC,KAAK,CAAC,CAAC,CAAC,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,MAAM,CAAC,CAAA;QACpC,MAAM,IAAI,QAAQ,CAAA;KACnB;IACD,OAAO,KAAK,CAAA;AACd,CAAC;AAED,SAAS,YAAY,CAAC,OAAO,EAAE,MAAM;IACnC,IAAI,CAAC,MAAM,CAAC,WAAW,EAAE;QACvB,MAAM,GAAG,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAA;KAC7B;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,OAAO,kCAAkC,CAAC,MAAM,CAAC,CAAA;KAClD;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,OAAO,MAAM,CAAC,YAAY,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAA;KACtC;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,IAAM,GAAG,GAAG,cAAI,CAAC,WAAW,CAAC,MAAM,CAAC,CAAA;QACpC,IACE,GAAG,CAAC,WAAW,CAAC,MAAM,CAAC,gBAAgB,CAAC;YACxC,GAAG,CAAC,QAAQ,CAAC,MAAM,CAAC,gBAAgB,CAAC,EACrC;YACA,MAAM,IAAI,+BAAsB,CAAC,kBAAkB,CAAC,CAAA;SACrD;QACD,OAAO,GAAG,CAAC,QAAQ,EAAE,CAAA;KACtB;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,OAAO,MAAM,CAAC,WAAW,CAAC,CAAC,CAAC,CAAA;KAC7B;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,OAAO,MAAM,CAAC,WAAW,CAAC,CAAC,CAAC,CAAA;KAC7B;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,OAAO,MAAM,CAAC,YAAY,CAAC,CAAC,CAAC,CAAA;KAC9B;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,OAAO,MAAM,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAA;KAC1B;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,OAAO,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CAAA;KAC3B;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,OAAO,MAAM,CAAC,WAAW,CAAC,CAAC,CAAC,CAAA;KAC7B;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,IAAM,GAAG,GAAG,kCAAkC,CAAC,MAAM,CAAC,CAAA;QACtD,OAAO,MAAM,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,KAAK,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,CAAA;KACnD;IACD,IAAI,OAAO,KAAK,GAAG,EAAE;QACnB,OAAO,kBAAkB,CAAC,MAAM,CAAC,CAAA;KAClC;IAED,MAAM,IAAI,2BAAkB,CAAC,gCAAyB,OAAO,CAAE,CAAC,CAAA;AAClE,CAAC;AAED,SAAS,kBAAkB,CACzB,UAAU,EACV,gBAAgB,EAChB,gBAAgB,EAChB,iBAAiB,EACjB,YAAY;IAEZ,IAAI,cAAc,GAAG,CAAC,CAAA;IACtB,IAAI,aAAa,GAAG,UAAU,CAAC,cAAc,GAAG,CAAC,CAAA;IACjD,IAAM,YAAY,GAAG,IAAI,KAAK,CAAC,gBAAgB,CAAC,CAAA;IAEhD,SAAS,YAAY,CAAC,EAAsB;YAArB,IAAI,QAAA,EAAE,cAAc,QAAA;QACzC,IAAM,IAAI,GAAG,gBAAgB,CAAC,cAAc,CAAC,CAAA;QAC7C,IAAI,IAAI,KAAK,WAAW,EAAE;YACxB,OAAO,MAAM,CAAC,YAAY,CAAC,IAAI,CAAC,CAAA;SACjC;QACD,IAAI,IAAI,KAAK,QAAQ,EAAE;YACrB,OAAO,IAAI,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAA;SAC7B;QACD,IAAI,IAAI,KAAK,UAAU,EAAE;YACvB,OAAO,IAAI,CAAC,OAAO,EAAE,CAAA;SACtB;QACD,gCAAgC;QAChC,mBAAmB;QACnB,IAAI;QACJ,OAAO,IAAI,CAAA;IACb,CAAC;IAED,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,gBAAgB,EAAE,CAAC,IAAI,CAAC,EAAE;QAC5C,IAAM,IAAI,GAAG,MAAM,CAAC,YAAY,CAAC,gBAAgB,CAAC,IAAI,CAAC,CAAC,CAAA;QAExD,IAAM,YAAY,GAAG,gBAAgB,CAAC,IAAI,CAAC,CAAA;QAE3C,IAAM,WAAW,GAAG,EAAE,IAAI,MAAA,EAAE,CAAA;QAC5B,2CAA2C;QAC3C,IAAM,WAAW,GAAG;YAClB,CAAC,EAAE,CAAC,WAAW,EAAE,IAAI,CAAC;YACtB,CAAC,EAAE,CAAC,QAAQ,EAAE,YAAY,GAAG,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC;YAC7C,CAAC,EAAE,CAAC,QAAQ,EAAE,IAAI,CAAC;YACnB,CAAC,EAAE,CAAC,QAAQ,EAAE,IAAI,CAAC;YACnB,CAAC,EAAE,CAAC,QAAQ,EAAE,IAAI,CAAC;YACnB,CAAC,EAAE,CAAC,WAAW,EAAE,IAAI,CAAC;YACtB,CAAC,EAAE,CAAC,QAAQ,EAAE,IAAI,CAAC;YACnB,CAAC,EAAE,CAAC,UAAU,EAAE,IAAI,CAAC;YACrB,CAAC,EAAE,CAAC,QAAQ,EAAE,IAAI,CAAC;YACnB,CAAC,EAAE,CAAC,QAAQ,EAAE,IAAI,CAAC;YACnB,CAAC,EAAE,CAAC,QAAQ,EAAE,IAAI,CAAC;YACnB,CAAC,EAAE,CAAC,QAAQ,EAAE,IAAI,CAAC;SACpB,CAAC,IAAI,CAAC,CAAA;QAEP,IAAI,CAAC,WAAW,EAAE;YAChB,MAAM,IAAI,2BAAkB,CAAC,sCAA8B,IAAI,OAAG,CAAC,CAAA;SACpE;QAED,WAAW,CAAC,IAAI,GAAG,YAAY,CAAC,WAAW,CAAC,CAAA;QAE5C,uFAAuF;QACvF,IAAM,WAAW,GAAG,EAAE,CAAC,EAAE,CAAC,QAAQ,EAAE,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,CAAA;QACjD,IAAI,WAAW,EAAE;YACf,WAAW,CAAC,IAAI,GAAG,CAAC,WAAW,CAAC,IAAI,EAAE,YAAY,CAAC,WAAW,CAAC,CAAC,CAAA;SACjE;QAED,cAAc,IAAI,YAAY,CAAA;QAC9B,WAAW,CAAC,GAAG,GAAG,cAAc,CAAA;QAEhC,aAAa,IAAI,YAAY,CAAA;QAC7B,WAAW,CAAC,MAAM,GAAG,aAAa,CAAA;QAElC,oFAAoF;QACpF,IAAI,IAAI,KAAK,GAAG,IAAI,IAAI,KAAK,GAAG,EAAE;YAChC,aAAa,IAAI,WAAW,CAAC,IAAI,CAAA;SAClC;aAAM,IAAI,IAAI,KAAK,GAAG,IAAI,IAAI,KAAK,GAAG,EAAE;YACvC,aAAa,IAAI,WAAW,CAAC,IAAI,CAAC,MAAM,CAAA;SACzC;aAAM,IAAI,IAAI,KAAK,GAAG,EAAE;YACvB,aAAa,IAAI,CAAC,CAAA;SACnB;QAED,YAAY,CAAC,CAAC,CAAC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package/dist/cramFile/slice/index.d.ts ADDED
@@ -0,0 +1,20 @@
1
+ export default class CramSlice {
2
+ constructor(container: any, position: any);
3
+ container: any;
4
+ file: any;
5
+ containerPosition: any;
6
+ getHeader(): Promise<any>;
7
+ getBlocks(): Promise<any[]>;
8
+ getCoreDataBlock(): Promise<any>;
9
+ _getBlocksContentIdIndex(): Promise<{}>;
10
+ getBlockByContentId(id: any): Promise<any>;
11
+ getReferenceRegion(): Promise<{
12
+ seq: any;
13
+ start: any;
14
+ end: number;
15
+ span: any;
16
+ } | undefined>;
17
+ getAllRecords(): Promise<any>;
18
+ _fetchRecords(): Promise<any[]>;
19
+ getRecords(filterFunction: any): Promise<any>;
20
+ }