@genspectrum/dashboard-components 0.18.5 → 0.18.6

package/dist/components.js

@@ -843,7 +843,7 @@ const InfoHeadline2 = ({ children }) => {
   return /* @__PURE__ */ u$1("h2", { className: "text-justify text-base font-bold mt-4", children });
 };
 const InfoParagraph = ({ children }) => {
-  return /* @__PURE__ */ u$1("p", { className: "text-justify text-base font-normal my-1", children });
+  return /* @__PURE__ */ u$1("p", { className: "text-justify text-base font-normal my-1 text-wrap", children });
 };
 const InfoLink = ({ children, href }) => {
   return /* @__PURE__ */ u$1("a", { className: "text-blue-600 hover:text-blue-800", href, target: "_blank", rel: "noopener noreferrer", children });
@@ -1069,43 +1069,46 @@ const MutationAnnotationsContextProvider = ({ value, children }) => {
     if (!parseResult2.success) {
       return parseResult2;
     }
-    const nucleotideMap = /* @__PURE__ */ new Map();
-    const nucleotidePositions = /* @__PURE__ */ new Map();
-    const aminoAcidMap = /* @__PURE__ */ new Map();
-    const aminoAcidPositions = /* @__PURE__ */ new Map();
-    value.forEach((annotation) => {
-      new Set(annotation.nucleotideMutations).forEach((code) => {
-        addAnnotationToMap(nucleotideMap, code, annotation);
-      });
-      new Set(annotation.aminoAcidMutations).forEach((code) => {
-        addAnnotationToMap(aminoAcidMap, code, annotation);
-      });
-      new Set(annotation.nucleotidePositions).forEach((position) => {
-        addAnnotationToMap(nucleotidePositions, position, annotation);
-      });
-      new Set(annotation.aminoAcidPositions).forEach((position) => {
-        addAnnotationToMap(aminoAcidPositions, position, annotation);
-      });
-    });
-    return {
-      success: true,
-      value: {
-        nucleotide: { mutation: nucleotideMap, position: nucleotidePositions },
-        "amino acid": { mutation: aminoAcidMap, position: aminoAcidPositions }
-      }
-    };
+    return { success: true, value: getMutationAnnotationsContext(value) };
   }, [value]);
   if (!parseResult.success) {
     return /* @__PURE__ */ u$1(ResizeContainer, { size: { width: "100%" }, children: /* @__PURE__ */ u$1(ErrorDisplay, { error: parseResult.error, layout: "vertical" }) });
   }
   return /* @__PURE__ */ u$1(MutationAnnotationsContext.Provider, { value: parseResult.value, children });
 };
+function getMutationAnnotationsContext(value) {
+  const nucleotideMap = /* @__PURE__ */ new Map();
+  const nucleotidePositions = /* @__PURE__ */ new Map();
+  const aminoAcidMap = /* @__PURE__ */ new Map();
+  const aminoAcidPositions = /* @__PURE__ */ new Map();
+  value.forEach((annotation) => {
+    new Set(annotation.nucleotideMutations).forEach((code) => {
+      addAnnotationToMap(nucleotideMap, code, annotation);
+    });
+    new Set(annotation.aminoAcidMutations).forEach((code) => {
+      addAnnotationToMap(aminoAcidMap, code, annotation);
+    });
+    new Set(annotation.nucleotidePositions).forEach((position) => {
+      addAnnotationToMap(nucleotidePositions, position, annotation);
+    });
+    new Set(annotation.aminoAcidPositions).forEach((position) => {
+      addAnnotationToMap(aminoAcidPositions, position, annotation);
+    });
+  });
+  return {
+    nucleotide: { mutation: nucleotideMap, position: nucleotidePositions },
+    "amino acid": { mutation: aminoAcidMap, position: aminoAcidPositions }
+  };
+}
 function addAnnotationToMap(map2, code, annotation) {
   const oldAnnotations = map2.get(code.toUpperCase()) ?? [];
   map2.set(code.toUpperCase(), [...oldAnnotations, annotation]);
 }
 function useMutationAnnotationsProvider() {
   const mutationAnnotations = x$1(MutationAnnotationsContext);
+  return getMutationAnnotationsProvider(mutationAnnotations);
+}
+function getMutationAnnotationsProvider(mutationAnnotations) {
   return (mutation, sequenceType) => {
     const position = mutation.segment === void 0 ? `${mutation.position}` : `${mutation.segment.toUpperCase()}:${mutation.position}`;
     const possiblePositionAnnotations = mutationAnnotations[sequenceType].position.get(position);
@@ -1912,7 +1915,7 @@ const Dropdown = ({ children, buttonTitle, placement }) => {
     setShowContent(!showContent);
   };
   return /* @__PURE__ */ u$1(Fragment, { children: [
-    /* @__PURE__ */ u$1("button", { type: "button", className: "btn btn-xs whitespace-nowrap w-full", onClick: toggle, ref: referenceRef, children: buttonTitle }),
+    /* @__PURE__ */ u$1("button", { type: "button", className: "btn btn-xs whitespace-nowrap w-full", onClick: toggle, ref: referenceRef, children: /* @__PURE__ */ u$1("span", { className: "w-full truncate", children: buttonTitle }) }),
     /* @__PURE__ */ u$1("div", { ref: floatingRef, className: `${dropdownClass} ${showContent ? "" : "hidden"}`, children })
   ] });
 };
@@ -2207,7 +2210,7 @@ const SegmentSelector = ({
   if (displayedSegments.length <= 1) {
     return null;
   }
-  return /* @__PURE__ */ u$1("div", { className: "w-20 inline-flex", children: /* @__PURE__ */ u$1(
+  return /* @__PURE__ */ u$1("div", { className: "w-24 inline-flex", children: /* @__PURE__ */ u$1(
     CheckboxSelector,
     {
       items: displayedSegments,
@@ -2461,8 +2464,8 @@ const MutationComparisonInfo = ({ originalComponentProps }) => {
 };
 const gridJsStyle = '.gridjs-head button, .gridjs-footer button {\n  cursor: pointer;\n  background-color: transparent;\n  background-image: none;\n  padding: 0;\n  margin: 0;\n  border: none;\n  outline: none;\n}\n\n.gridjs-temp {\n  position: relative;\n}\n\n.gridjs-head {\n  width: 100%;\n  margin-bottom: 5px;\n  padding: 5px 1px;\n}\n.gridjs-head::after {\n  content: "";\n  display: block;\n  clear: both;\n}\n.gridjs-head:empty {\n  padding: 0;\n  border: none;\n}\n\n.gridjs-container {\n  overflow: hidden;\n  display: inline-block;\n  padding: 2px;\n  color: #000;\n  position: relative;\n  z-index: 0;\n}\n\n.gridjs-footer {\n  display: block;\n  position: relative;\n  width: 100%;\n  z-index: 5;\n  padding: 12px 24px;\n  border-top: 1px solid #e5e7eb;\n  background-color: #fff;\n  box-shadow: 0 1px 3px 0 rgba(0, 0, 0, 0.1), 0 1px 2px 0 rgba(0, 0, 0, 0.26);\n  border-radius: 0 0 8px 8px;\n  border-bottom-width: 1px;\n  border-color: #e5e7eb;\n}\n.gridjs-footer:empty {\n  padding: 0;\n  border: none;\n}\n\ninput.gridjs-input {\n  outline: none;\n  background-color: #fff;\n  border: 1px solid #d2d6dc;\n  border-radius: 5px;\n  padding: 10px 13px;\n  font-size: 14px;\n  line-height: 1.45;\n  -webkit-appearance: none;\n  -moz-appearance: none;\n  appearance: none;\n}\ninput.gridjs-input:focus {\n  box-shadow: 0 0 0 3px rgba(149, 189, 243, 0.5);\n  border-color: #9bc2f7;\n}\n\n.gridjs-pagination {\n  color: #3d4044;\n}\n.gridjs-pagination::after {\n  content: "";\n  display: block;\n  clear: both;\n}\n.gridjs-pagination .gridjs-summary {\n  float: left;\n  margin-top: 5px;\n}\n.gridjs-pagination .gridjs-pages {\n  float: right;\n}\n.gridjs-pagination .gridjs-pages button {\n  padding: 5px 14px;\n  border: 1px solid #d2d6dc;\n  background-color: #fff;\n  border-right: none;\n  outline: none;\n  -webkit-user-select: none;\n     -moz-user-select: none;\n          user-select: none;\n}\n.gridjs-pagination .gridjs-pages button:focus {\n  box-shadow: 0 0 0 2px rgba(149, 189, 243, 0.5);\n  position: relative;\n  margin-right: -1px;\n  border-right: 1px solid #d2d6dc;\n}\n.gridjs-pagination .gridjs-pages button:hover {\n  background-color: #f7f7f7;\n  color: rgb(60, 66, 87);\n  outline: none;\n}\n.gridjs-pagination .gridjs-pages button:disabled,\n.gridjs-pagination .gridjs-pages button[disabled],\n.gridjs-pagination .gridjs-pages button:hover:disabled {\n  cursor: default;\n  background-color: #fff;\n  color: #6b7280;\n}\n.gridjs-pagination .gridjs-pages button.gridjs-spread {\n  cursor: default;\n  box-shadow: none;\n  background-color: #fff;\n}\n.gridjs-pagination .gridjs-pages button.gridjs-currentPage {\n  background-color: #f7f7f7;\n  font-weight: bold;\n}\n.gridjs-pagination .gridjs-pages button:last-child {\n  border-bottom-right-radius: 6px;\n  border-top-right-radius: 6px;\n  border-right: 1px solid #d2d6dc;\n}\n.gridjs-pagination .gridjs-pages button:first-child {\n  border-bottom-left-radius: 6px;\n  border-top-left-radius: 6px;\n}\n.gridjs-pagination .gridjs-pages button:last-child:focus {\n  margin-right: 0;\n}\n\nbutton.gridjs-sort {\n  float: right;\n  height: 24px;\n  width: 13px;\n  background-color: transparent;\n  background-repeat: no-repeat;\n  background-position-x: center;\n  cursor: pointer;\n  padding: 0;\n  margin: 0;\n  border: none;\n  outline: none;\n  background-size: contain;\n}\nbutton.gridjs-sort-neutral {\n  opacity: 0.3;\n  background-image: url("data:image/svg+xml;base64,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");\n  background-position-y: center;\n}\nbutton.gridjs-sort-asc {\n  background-image: url("data:image/svg+xml;base64,PHN2ZyB2ZXJzaW9uPSIxLjEiIGlkPSJDYXBhXzEiIHhtbG5zPSJodHRwOi8vd3d3LnczLm9yZy8yMDAwL3N2ZyIgeG1sbnM6eGxpbms9Imh0dHA6Ly93d3cudzMub3JnLzE5OTkveGxpbmsiIHg9IjBweCIgeT0iMHB4IgoJIHdpZHRoPSIyOTIuMzYycHgiIGhlaWdodD0iMjkyLjM2MXB4IiB2aWV3Qm94PSIwIDAgMjkyLjM2MiAyOTIuMzYxIiBzdHlsZT0iZW5hYmxlLWJhY2tncm91bmQ6bmV3IDAgMCAyOTIuMzYyIDI5Mi4zNjE7IgoJIHhtbDpzcGFjZT0icHJlc2VydmUiPgo8Zz4KCTxwYXRoIGQ9Ik0yODYuOTM1LDE5Ny4yODdMMTU5LjAyOCw2OS4zODFjLTMuNjEzLTMuNjE3LTcuODk1LTUuNDI0LTEyLjg0Ny01LjQyNHMtOS4yMzMsMS44MDctMTIuODUsNS40MjRMNS40MjQsMTk3LjI4NwoJCUMxLjgwNywyMDAuOTA0LDAsMjA1LjE4NiwwLDIxMC4xMzRzMS44MDcsOS4yMzMsNS40MjQsMTIuODQ3YzMuNjIxLDMuNjE3LDcuOTAyLDUuNDI1LDEyLjg1LDUuNDI1aDI1NS44MTMKCQljNC45NDksMCw5LjIzMy0xLjgwOCwxMi44NDgtNS40MjVjMy42MTMtMy42MTMsNS40MjctNy44OTgsNS40MjctMTIuODQ3UzI5MC41NDgsMjAwLjkwNCwyODYuOTM1LDE5Ny4yODd6Ii8+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPGc+CjwvZz4KPC9zdmc+");\n  background-position-y: 35%;\n  background-size: 10px;\n}\nbutton.gridjs-sort-desc {\n  background-image: url("data:image/svg+xml;base64,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");\n  background-position-y: 65%;\n  background-size: 10px;\n}\nbutton.gridjs-sort:focus {\n  outline: none;\n}\n\ntable.gridjs-table {\n  width: 100%;\n  max-width: 100%;\n  border-collapse: collapse;\n  text-align: left;\n  display: table;\n  margin: 0;\n  padding: 0;\n  overflow: auto;\n  table-layout: fixed;\n}\n\n.gridjs-tbody {\n  background-color: #fff;\n}\n\ntd.gridjs-td {\n  border: 1px solid #e5e7eb;\n  padding: 12px 24px;\n  background-color: #fff;\n  box-sizing: content-box;\n}\ntd.gridjs-td:first-child {\n  border-left: none;\n}\ntd.gridjs-td:last-child {\n  border-right: none;\n}\ntd.gridjs-message {\n  text-align: center;\n}\n\nth.gridjs-th {\n  position: relative;\n  color: #6b7280;\n  background-color: #f9fafb;\n  border: 1px solid #e5e7eb;\n  border-top: none;\n  padding: 14px 24px;\n  -webkit-user-select: none;\n     -moz-user-select: none;\n          user-select: none;\n  box-sizing: border-box;\n  white-space: nowrap;\n  outline: none;\n  vertical-align: middle;\n}\nth.gridjs-th .gridjs-th-content {\n  text-overflow: ellipsis;\n  overflow: hidden;\n  width: 100%;\n  float: left;\n}\nth.gridjs-th-sort {\n  cursor: pointer;\n}\nth.gridjs-th-sort .gridjs-th-content {\n  width: calc(100% - 15px);\n}\nth.gridjs-th-sort:hover {\n  background-color: #e5e7eb;\n}\nth.gridjs-th-sort:focus {\n  background-color: #e5e7eb;\n}\nth.gridjs-th-fixed {\n  position: sticky;\n  box-shadow: 0 1px 0 0 #e5e7eb;\n}\n@supports (-moz-appearance: none) {\n  th.gridjs-th-fixed {\n    box-shadow: 0 0 0 1px #e5e7eb;\n  }\n}\nth.gridjs-th:first-child {\n  border-left: none;\n}\nth.gridjs-th:last-child {\n  border-right: none;\n}\n\n.gridjs-tr {\n  border: none;\n}\n.gridjs-tr-selected td {\n  background-color: #ebf5ff;\n}\n.gridjs-tr:last-child td {\n  border-bottom: 0;\n}\n\n.gridjs *,\n.gridjs :after,\n.gridjs :before {\n  box-sizing: border-box;\n}\n\n.gridjs-wrapper {\n  position: relative;\n  z-index: 1;\n  overflow: auto;\n  width: 100%;\n  -webkit-font-smoothing: antialiased;\n  -moz-osx-font-smoothing: grayscale;\n  box-shadow: 0 1px 3px 0 rgba(0, 0, 0, 0.1), 0 1px 2px 0 rgba(0, 0, 0, 0.26);\n  border-radius: 8px 8px 0 0;\n  display: block;\n  border-top-width: 1px;\n  border-color: #e5e7eb;\n}\n.gridjs-wrapper:nth-last-of-type(2) {\n  border-radius: 8px;\n  border-bottom-width: 1px;\n}\n\n.gridjs-search {\n  float: left;\n}\n.gridjs-search-input {\n  width: 250px;\n}\n\n.gridjs-loading-bar {\n  z-index: 10;\n  position: absolute;\n  left: 0;\n  right: 0;\n  top: 0;\n  bottom: 0;\n  background-color: #fff;\n  opacity: 0.5;\n}\n.gridjs-loading-bar::after {\n  position: absolute;\n  top: 0;\n  right: 0;\n  bottom: 0;\n  left: 0;\n  transform: translateX(-100%);\n  background-image: linear-gradient(90deg, rgba(204, 204, 204, 0) 0, rgba(204, 204, 204, 0.2) 20%, rgba(204, 204, 204, 0.5) 60%, rgba(204, 204, 204, 0));\n  animation: shimmer 2s infinite;\n  content: "";\n}\n@keyframes shimmer {\n  100% {\n    transform: translateX(100%);\n  }\n}\n\n.gridjs-td .gridjs-checkbox {\n  display: block;\n  margin: auto;\n  cursor: pointer;\n}\n\n.gridjs-resizable {\n  position: absolute;\n  top: 0;\n  bottom: 0;\n  right: 0;\n  width: 5px;\n}\n.gridjs-resizable:hover {\n  cursor: ew-resize;\n  background-color: #9bc2f7;\n}\n/*# sourceMappingURL=mermaid.css?inline.map */';
 const minMaxPercentSliderCss = 'input[type=range]::-webkit-slider-thumb {\n    -webkit-appearance: none;\n    pointer-events: all;\n    width: 24px;\n    height: 24px;\n    background-color: #fff;\n    border-radius: 50%;\n    box-shadow: 0 0 0 1px #C6C6C6;\n    cursor: pointer;\n}\n\ninput[type=range]::-moz-range-thumb {\n    -webkit-appearance: none;\n    pointer-events: all;\n    width: 24px;\n    height: 24px;\n    background-color: #fff;\n    border-radius: 50%;\n    box-shadow: 0 0 0 1px #C6C6C6;\n    cursor: pointer;\n}\n\ninput[type=range]::-webkit-slider-thumb:hover {\n    background: #f7f7f7;\n}\n\ninput[type=range]::-webkit-slider-thumb:active {\n    box-shadow: inset 0 0 3px #387bbe, 0 0 9px #387bbe;\n    -webkit-box-shadow: inset 0 0 3px #387bbe, 0 0 9px #387bbe;\n}\n\ninput[type="range"] {\n    -webkit-appearance: none;\n    -moz-appearance: none;\n         appearance: none;\n    height: 2px;\n    width: 100%;\n    position: absolute;\n    background-color: #C6C6C6;\n    pointer-events: none;\n}';
-const tailwindStyle = `/*! tailwindcss v4.0.14 | MIT License | https://tailwindcss.com */
-@layer theme{:root,:host{--font-sans:ui-sans-serif,system-ui,sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji";--font-mono:ui-monospace,SFMono-Regular,Menlo,Monaco,Consolas,"Liberation Mono","Courier New",monospace;--color-red-200:oklch(.885 .062 18.334);--color-red-600:oklch(.577 .245 27.325);--color-red-700:oklch(.505 .213 27.518);--color-blue-300:oklch(.809 .105 251.813);--color-blue-600:oklch(.546 .245 262.881);--color-blue-700:oklch(.488 .243 264.376);--color-blue-800:oklch(.424 .199 265.638);--color-slate-200:oklch(.929 .013 255.508);--color-slate-500:oklch(.554 .046 257.417);--color-gray-100:oklch(.967 .003 264.542);--color-gray-200:oklch(.928 .006 264.531);--color-gray-300:oklch(.872 .01 258.338);--color-gray-400:oklch(.707 .022 261.325);--color-gray-500:oklch(.551 .027 264.364);--color-gray-600:oklch(.446 .03 256.802);--color-gray-700:oklch(.373 .034 259.733);--color-neutral-500:oklch(.556 0 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repeatCount='indefinite'/%3E%3Canimate attributeName='stroke-dasharray' values='0,150;42,150;42,150' keyTimes='0;0.475;1' dur='1.5s' repeatCount='indefinite'/%3E%3Canimate attributeName='stroke-dashoffset' values='0;-16;-59' keyTimes='0;0.475;1' dur='1.5s' repeatCount='indefinite'/%3E%3C/circle%3E%3C/g%3E%3C/svg%3E")}.mdi--chevron-left{--svg:url("data:image/svg+xml,%3Csvg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 24 24' width='24' height='24'%3E%3Cpath fill='black' d='M15.41 16.58L10.83 12l4.58-4.59L14 6l-6 6l6 6z'/%3E%3C/svg%3E")}.mdi--chevron-left-first{--svg:url("data:image/svg+xml,%3Csvg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 24 24' width='24' height='24'%3E%3Cpath fill='black' d='M18.41 16.59L13.82 12l4.59-4.59L17 6l-6 6l6 6zM6 6h2v12H6z'/%3E%3C/svg%3E")}.mdi--chevron-right{--svg:url("data:image/svg+xml,%3Csvg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 24 24' width='24' height='24'%3E%3Cpath fill='black' d='M8.59 16.58L13.17 12L8.59 7.41L10 6l6 6l-6 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:where(.modal-box){--modal-tl:var(--radius-box);--modal-tr:var(--radius-box);--modal-bl:var(--radius-box);--modal-br:var(--radius-box);width:91.6667%;max-width:32rem;height:auto;max-height:calc(100vh - 5em);translate:0 2%;scale:98%}.sm\\:max-w-5xl{max-width:var(--container-5xl)}.sm\\:flex-row{flex-direction:row}.sm\\:text-4xl{font-size:var(--text-4xl);line-height:var(--tw-leading,var(--text-4xl--line-height))}}@container (width>=2rem){.\\@\\[2rem\\]\\:visible{visibility:visible}}@container (width>=6rem){.\\@\\[6rem\\]\\:visible{visibility:visible}}@container (width>=14rem){.\\@4xs\\:flex-row{flex-direction:row}.\\@4xs\\:rounded-l-none{border-top-left-radius:0;border-bottom-left-radius:0}.\\@4xs\\:rounded-tr-none{border-top-right-radius:0}.\\@4xs\\:rounded-bl-md{border-bottom-left-radius:var(--radius-md)}}@container (width>=28rem){.\\@md\\:flex-row{flex-direction:row}.\\@md\\:rounded-l-md{border-top-left-radius:var(--radius-md);border-bottom-left-radius:var(--radius-md)}.\\@md\\:rounded-l-none{border-top-left-radius:0;border-bottom-left-radius:0}.\\@md\\:rounded-r-md{border-top-right-radius:var(--radius-md);border-bottom-right-radius:var(--radius-md)}.\\@md\\:rounded-r-none{border-top-right-radius:0;border-bottom-right-radius:0}}@container (width>=36rem){.\\@xl\\:block{display:block}.\\@xl\\:justify-end{justify-content:flex-end}}}@keyframes skeleton{0%{background-position:150%}to{background-position:-50%}}@keyframes progress{50%{background-position-x:-115%}}@keyframes radio{0%{padding:5px}50%{padding:3px}}@keyframes dropdown{0%{opacity:0}}@keyframes rating{0%,40%{filter:brightness(1.05)contrast(1.05);scale:1.1}}@keyframes toast{0%{opacity:0;scale:.9}to{opacity:1;scale:1}}@property --tw-translate-x{syntax:"*";inherits:false;initial-value:0}@property --tw-translate-y{syntax:"*";inherits:false;initial-value:0}@property --tw-translate-z{syntax:"*";inherits:false;initial-value:0}@property --tw-rotate-x{syntax:"*";inherits:false;initial-value:rotateX(0)}@property --tw-rotate-y{syntax:"*";inherits:false;initial-value:rotateY(0)}@property --tw-rotate-z{syntax:"*";inherits:false;initial-value:rotateZ(0)}@property --tw-skew-x{syntax:"*";inherits:false;initial-value:skewX(0)}@property --tw-skew-y{syntax:"*";inherits:false;initial-value:skewY(0)}@property --tw-border-style{syntax:"*";inherits:false;initial-value:solid}@property --tw-leading{syntax:"*";inherits:false}@property --tw-font-weight{syntax:"*";inherits:false}@property --tw-shadow{syntax:"*";inherits:false;initial-value:0 0 #0000}@property --tw-shadow-color{syntax:"*";inherits:false}@property --tw-inset-shadow{syntax:"*";inherits:false;initial-value:0 0 #0000}@property --tw-inset-shadow-color{syntax:"*";inherits:false}@property --tw-ring-color{syntax:"*";inherits:false}@property --tw-ring-shadow{syntax:"*";inherits:false;initial-value:0 0 #0000}@property --tw-inset-ring-color{syntax:"*";inherits:false}@property --tw-inset-ring-shadow{syntax:"*";inherits:false;initial-value:0 0 #0000}@property --tw-ring-inset{syntax:"*";inherits:false}@property --tw-ring-offset-width{syntax:"<length>";inherits:false;initial-value:0}@property --tw-ring-offset-color{syntax:"*";inherits:false;initial-value:#fff}@property --tw-ring-offset-shadow{syntax:"*";inherits:false;initial-value:0 0 #0000}@property --tw-outline-style{syntax:"*";inherits:false;initial-value:solid}@property --tw-blur{syntax:"*";inherits:false}@property --tw-brightness{syntax:"*";inherits:false}@property --tw-contrast{syntax:"*";inherits:false}@property --tw-grayscale{syntax:"*";inherits:false}@property --tw-hue-rotate{syntax:"*";inherits:false}@property --tw-invert{syntax:"*";inherits:false}@property --tw-opacity{syntax:"*";inherits:false}@property --tw-saturate{syntax:"*";inherits:false}@property --tw-sepia{syntax:"*";inherits:false}@property --tw-drop-shadow{syntax:"*";inherits:false}@property --tw-duration{syntax:"*";inherits:false}@property --tw-scale-x{syntax:"*";inherits:false;initial-value:1}@property --tw-scale-y{syntax:"*";inherits:false;initial-value:1}@property --tw-scale-z{syntax:"*";inherits:false;initial-value:1}
 `;
 var __defProp$f = Object.defineProperty;
 var __decorateClass$f = (decorators, target, key, kind) => {
@@ -6438,7 +6441,10 @@ function getFilteredMutationOverTimeData$1({
   displayedSegments,
   displayedMutationTypes,
   proportionInterval,
-  displayMutations
+  displayMutations,
+  mutationFilterValue,
+  sequenceType,
+  annotationProvider
 }) {
   const filteredData = new Map2dView(data);
   const displayMutationsSet = displayMutations === void 0 ? null : new Set(displayMutations.map((it) => it.toUpperCase()));
@@ -6452,6 +6458,9 @@ function getFilteredMutationOverTimeData$1({
     if (displayMutationsSet !== null && !displayMutationsSet.has(entry.mutation.code)) {
       return true;
     }
+    if (applySearchFilter(entry.mutation, sequenceType, mutationFilterValue, annotationProvider)) {
+      return true;
+    }
     return displayedMutationTypes.some(
       (mutationType) => mutationType.type === entry.mutation.type && !mutationType.checked
     );
@@ -6461,6 +6470,21 @@ function getFilteredMutationOverTimeData$1({
   });
   return filteredData;
 }
+function applySearchFilter(mutation, sequenceType, filterValue, annotationProvider) {
+  if (filterValue === "") {
+    return false;
+  }
+  if (mutation.code.includes(filterValue)) {
+    return false;
+  }
+  const mutationAnnotations = annotationProvider(mutation, sequenceType);
+  if (mutationAnnotations === void 0 || mutationAnnotations.length === 0) {
+    return true;
+  }
+  return !mutationAnnotations.some(
+    (annotation) => annotation.description.includes(filterValue) || annotation.name.includes(filterValue) || annotation.symbol.includes(filterValue)
+  );
+}
 const MutationsOverTimeGridTooltip = ({
   mutation,
   date,
@@ -6628,6 +6652,19 @@ const Tooltip = ({ children, content, position = "bottom" }) => {
     )
   ] });
 };
+const pageSizeContext = createContext$1({
+  pageSize: -1,
+  setPageSize: () => {
+    throw new Error("pageSizeContext not initialized");
+  }
+});
+function usePageSizeContext() {
+  return x$1(pageSizeContext);
+}
+const PageSizeContextProvider = ({ children, pageSizes }) => {
+  const [pageSize, setPageSize] = d(typeof pageSizes === "number" ? pageSizes : pageSizes.at(0) ?? 10);
+  return /* @__PURE__ */ u$1(pageSizeContext.Provider, { value: { pageSize, setPageSize }, children });
+};
 const pageSizesSchema = z$2.union([z$2.array(z$2.number()), z$2.number()]);
 function Pagination({
   table,
@@ -6660,6 +6697,7 @@ function PageSizeSelector({
   table,
   pageSizes
 }) {
+  const { pageSize, setPageSize } = usePageSizeContext();
   if (typeof pageSizes === "number" || pageSizes.length <= 1) {
     return null;
   }
@@ -6669,13 +6707,20 @@ function PageSizeSelector({
       "select",
       {
         className: `select select-ghost select-sm ${heightForSmallerLines}`,
-        value: table.getState().pagination.pageSize,
+        value: pageSize,
         onChange: (e2) => {
-          var _a;
-          table.setPageSize(Number((_a = e2.currentTarget) == null ? void 0 : _a.value));
+          var _a, _b;
+          const pageSize2 = Number((_a = e2.currentTarget) == null ? void 0 : _a.value);
+          if (Number.isNaN(pageSize2)) {
+            throw new Error(
+              `Invalid page size selected: The value ${(_b = e2.currentTarget) == null ? void 0 : _b.value} could not be parsed as a number.`
+            );
+          }
+          setPageSize(pageSize2);
+          table.setPageSize(pageSize2);
         },
         "aria-label": "Select number of rows per page",
-        children: pageSizes.map((pageSize) => /* @__PURE__ */ u$1("option", { value: pageSize, children: pageSize }, pageSize))
+        children: pageSizes.map((pageSize2) => /* @__PURE__ */ u$1("option", { value: pageSize2, children: pageSize2 }, pageSize2))
       }
     )
   ] });
@@ -6695,7 +6740,7 @@ function GotoPageSelector({ table }) {
         defaultValue: table.getState().pagination.pageIndex + 1,
         onChange: (e2) => {
           const page = e2.currentTarget.value ? Number(e2.currentTarget.value) - 1 : 0;
-          table.setPageIndex(page);
+          table.setPageIndex(Math.min(page, table.getPageCount() - 1));
         },
         className: `input input-ghost input-sm ${heightForSmallerLines}`,
         "aria-label": "Enter page number to go to"
@@ -6775,6 +6820,14 @@ function usePreactTable(options2) {
       (_a = options2.onStateChange) == null ? void 0 : _a.call(options2, updater);
     }
   }));
+  const { pageSize } = usePageSizeContext();
+  y(
+    () => {
+      tableRef.current.setPageSize(pageSize);
+    },
+    [pageSize]
+    // eslint-disable-line react-hooks/exhaustive-deps -- only run this when the pageSize changes
+  );
   return tableRef.current;
 }
 const MutationsOverTimeGrid = ({
@@ -6789,10 +6842,6 @@ const MutationsOverTimeGrid = ({
       return { mutation: allMutations[index], values: [...row] };
     });
   }, [data]);
-  const [pagination, setPagination] = d({
-    pageIndex: 0,
-    pageSize: typeof pageSizes === "number" ? pageSizes : pageSizes.at(0) ?? 10
-  });
   const columns = T$1(() => {
     const columnHelper = createColumnHelper();
     const dates = data.getSecondAxisKeys();
@@ -6834,15 +6883,17 @@ const MutationsOverTimeGrid = ({
     });
     return [mutationHeader, ...dateHeaders];
   }, [colorScale, data, sequenceType]);
+  const { pageSize } = usePageSizeContext();
   const table = usePreactTable({
     data: tableData,
     columns,
     getCoreRowModel: getCoreRowModel(),
     getPaginationRowModel: getPaginationRowModel(),
-    debugTable: true,
-    onPaginationChange: setPagination,
-    state: {
-      pagination
+    initialState: {
+      pagination: {
+        pageIndex: 0,
+        pageSize
+      }
     }
   });
   return /* @__PURE__ */ u$1("div", { className: "w-full", children: [
@@ -6897,6 +6948,40 @@ const ColorScaleSelectorDropdown = ({
 }) => {
   return /* @__PURE__ */ u$1("div", { className: "w-20 inline-flex", children: /* @__PURE__ */ u$1(Dropdown, { buttonTitle: `Color scale`, placement: "bottom-start", children: /* @__PURE__ */ u$1(ColorScaleSelector, { colorScale, setColorScale }) }) });
 };
+function DeleteIcon() {
+  return /* @__PURE__ */ u$1(Fragment, { children: "×" });
+}
+function MutationsOverTimeTextFilter({ setFilterValue, value }) {
+  const onInput = (newValue) => {
+    setFilterValue(newValue);
+  };
+  const onDeleteClick = () => setFilterValue("");
+  return /* @__PURE__ */ u$1("div", { className: "w-28 inline-flex", children: /* @__PURE__ */ u$1(Dropdown, { buttonTitle: value === "" ? `Filter mutations` : value, placement: "bottom-start", children: /* @__PURE__ */ u$1("div", { children: /* @__PURE__ */ u$1("label", { className: "flex gap-1 input input-xs", children: [
+    /* @__PURE__ */ u$1(DebouncedInput, { placeholder: "Filter", onInput, value, type: "text" }),
+    value !== void 0 && value !== "" && /* @__PURE__ */ u$1("button", { className: "cursor-pointer", onClick: onDeleteClick, children: /* @__PURE__ */ u$1(DeleteIcon, {}) })
+  ] }) }) }) });
+}
+function DebouncedInput({
+  value: initialValue,
+  onInput,
+  debounce: debounce2 = 500,
+  ...props
+}) {
+  const [value, setValue] = d(initialValue);
+  y(() => {
+    setValue(initialValue);
+  }, [initialValue]);
+  y(() => {
+    const timeout = setTimeout(() => {
+      onInput(value ?? "");
+    }, debounce2);
+    return () => clearTimeout(timeout);
+  }, [value, debounce2, onInput]);
+  const onChangeInput = q$1((event) => {
+    setValue(event.currentTarget.value);
+  }, []);
+  return /* @__PURE__ */ u$1("input", { ...props, value, onInput: onChangeInput });
+}
 function useWebWorker(messageToWorker, WorkerConstructor) {
   const [data, setData] = d(void 0);
   const [error, setError] = d(void 0);
@@ -6999,6 +7084,8 @@ const MutationsOverTimeTabs$1 = ({
   originalComponentProps,
   overallMutationData
 }) => {
+  const [mutationFilterValue, setMutationFilterValue] = d("");
+  const annotationProvider = useMutationAnnotationsProvider();
   const [proportionInterval, setProportionInterval] = d(originalComponentProps.initialMeanProportionInterval);
   const [colorScale, setColorScale] = d({ min: 0, max: 1, color: "indigo" });
   const [displayedSegments, setDisplayedSegments] = useDisplayedSegments$1(originalComponentProps.sequenceType);
@@ -7006,7 +7093,6 @@ const MutationsOverTimeTabs$1 = ({
     { label: "Substitutions", checked: true, type: "substitution" },
     { label: "Deletions", checked: true, type: "deletion" }
   ]);
-  const displayMutations = originalComponentProps.displayMutations;
   const filteredData = T$1(() => {
     return getFilteredMutationOverTimeData$1({
       data: mutationOverTimeData,
@@ -7014,7 +7100,10 @@ const MutationsOverTimeTabs$1 = ({
       displayedSegments,
       displayedMutationTypes,
       proportionInterval,
-      displayMutations
+      displayMutations: originalComponentProps.displayMutations,
+      mutationFilterValue,
+      sequenceType: originalComponentProps.sequenceType,
+      annotationProvider
     });
   }, [
     mutationOverTimeData,
@@ -7022,7 +7111,10 @@ const MutationsOverTimeTabs$1 = ({
     displayedSegments,
     displayedMutationTypes,
     proportionInterval,
-    displayMutations
+    originalComponentProps.displayMutations,
+    originalComponentProps.sequenceType,
+    mutationFilterValue,
+    annotationProvider
   ]);
   const getTab = (view) => {
     if (filteredData === void 0) {
@@ -7061,10 +7153,12 @@ const MutationsOverTimeTabs$1 = ({
       filteredData,
       colorScale,
       setColorScale,
-      originalComponentProps
+      originalComponentProps,
+      setFilterValue: setMutationFilterValue,
+      mutationFilterValue
     }
   );
-  return /* @__PURE__ */ u$1(Tabs, { tabs, toolbar });
+  return /* @__PURE__ */ u$1(PageSizeContextProvider, { pageSizes: originalComponentProps.pageSizes, children: /* @__PURE__ */ u$1(Tabs, { tabs, toolbar }) });
 };
 const Toolbar$2 = ({
   activeTab,
@@ -7077,9 +7171,12 @@ const Toolbar$2 = ({
   filteredData,
   colorScale,
   setColorScale,
-  originalComponentProps
+  originalComponentProps,
+  setFilterValue,
+  mutationFilterValue
 }) => {
   return /* @__PURE__ */ u$1(Fragment, { children: [
+    /* @__PURE__ */ u$1(MutationsOverTimeTextFilter, { setFilterValue, value: mutationFilterValue }),
     activeTab === "Grid" && /* @__PURE__ */ u$1(ColorScaleSelectorDropdown, { colorScale, setColorScale }),
     /* @__PURE__ */ u$1(
       SegmentSelector,
@@ -8647,7 +8744,7 @@ const MutationsOverTimeTabs = ({
       setDisplayedSegments
     }
   );
-  return /* @__PURE__ */ u$1(Tabs, { tabs, toolbar });
+  return /* @__PURE__ */ u$1(PageSizeContextProvider, { pageSizes: originalComponentProps.pageSizes, children: /* @__PURE__ */ u$1(Tabs, { tabs, toolbar }) });
 };
 const Toolbar = ({
   colorScale,
@@ -8859,9 +8956,6 @@ function DatePicker({
     }
   );
 }
-function DeleteIcon() {
-  return /* @__PURE__ */ u$1(Fragment, { children: "×" });
-}
 const undefinedValue = "__undefined__";
 function ClearableSelect({
   items,
@@ -9896,7 +9990,7 @@ const t = (t2) => "object" == typeof t2 && null != t2 && 1 === t2.nodeType, e =
   }
   return L2;
 };
-var propTypes = { exports: {} };
+var propTypes$2 = { exports: {} };
 var reactIs = { exports: {} };
 var reactIs_production_min = {};
 /** @license React v16.13.1
@@ -10828,16 +10922,16 @@ function requireFactoryWithThrowingShims() {
 }
 var hasRequiredPropTypes;
 function requirePropTypes() {
-  if (hasRequiredPropTypes) return propTypes.exports;
+  if (hasRequiredPropTypes) return propTypes$2.exports;
   hasRequiredPropTypes = 1;
   if (process.env.NODE_ENV !== "production") {
     var ReactIs = requireReactIs();
     var throwOnDirectAccess = true;
-    propTypes.exports = /* @__PURE__ */ requireFactoryWithTypeCheckers()(ReactIs.isElement, throwOnDirectAccess);
+    propTypes$2.exports = /* @__PURE__ */ requireFactoryWithTypeCheckers()(ReactIs.isElement, throwOnDirectAccess);
   } else {
-    propTypes.exports = /* @__PURE__ */ requireFactoryWithThrowingShims()();
+    propTypes$2.exports = /* @__PURE__ */ requireFactoryWithThrowingShims()();
   }
-  return propTypes.exports;
+  return propTypes$2.exports;
 }
 var propTypesExports = /* @__PURE__ */ requirePropTypes();
 const PropTypes = /* @__PURE__ */ getDefaultExportFromCjs(propTypesExports);
@@ -11157,7 +11251,7 @@ function useLatestRef(val) {
   ref.current = val;
   return ref;
 }
-function useEnhancedReducer(reducer, props, createInitialState, isStateEqual) {
+function useEnhancedReducer(reducer, props, createInitialState, isStateEqual2) {
   var prevStateRef = A$1();
   var actionRef = A$1();
   var enhancedReducer = q$1(function(state2, action2) {
@@ -11179,14 +11273,18 @@ function useEnhancedReducer(reducer, props, createInitialState, isStateEqual) {
   var action = actionRef.current;
   y(function() {
     var prevState = getState(prevStateRef.current, action == null ? void 0 : action.props);
-    var shouldCallOnChangeProps = action && prevStateRef.current && !isStateEqual(prevState, state);
+    var shouldCallOnChangeProps = action && prevStateRef.current && !isStateEqual2(prevState, state);
     if (shouldCallOnChangeProps) {
       callOnChangeProps(action, prevState, state);
     }
     prevStateRef.current = state;
-  }, [state, action, isStateEqual]);
+  }, [state, action, isStateEqual2]);
   return [state, dispatchWithProps];
 }
+function useControlledReducer$1(reducer, props, createInitialState, isStateEqual2) {
+  var _useEnhancedReducer = useEnhancedReducer(reducer, props, createInitialState, isStateEqual2), state = _useEnhancedReducer[0], dispatch = _useEnhancedReducer[1];
+  return [getState(state, props), dispatch];
+}
 var defaultProps$3 = {
   itemToString: function itemToString(item) {
     return item ? String(item) : "";
@@ -11201,19 +11299,19 @@ var defaultProps$3 = {
     typeof window === "undefined" || false ? void 0 : window
   )
 };
-function getDefaultValue$1(props, propKey, defaultStateValues) {
-  if (defaultStateValues === void 0) {
-    defaultStateValues = dropdownDefaultStateValues;
+function getDefaultValue$1(props, propKey, defaultStateValues2) {
+  if (defaultStateValues2 === void 0) {
+    defaultStateValues2 = dropdownDefaultStateValues;
   }
   var defaultValue = props["default" + capitalizeString(propKey)];
   if (defaultValue !== void 0) {
     return defaultValue;
   }
-  return defaultStateValues[propKey];
+  return defaultStateValues2[propKey];
 }
-function getInitialValue$1(props, propKey, defaultStateValues) {
-  if (defaultStateValues === void 0) {
-    defaultStateValues = dropdownDefaultStateValues;
+function getInitialValue$1(props, propKey, defaultStateValues2) {
+  if (defaultStateValues2 === void 0) {
+    defaultStateValues2 = dropdownDefaultStateValues;
   }
   var value = props[propKey];
   if (value !== void 0) {
@@ -11223,7 +11321,7 @@ function getInitialValue$1(props, propKey, defaultStateValues) {
   if (initialValue !== void 0) {
     return initialValue;
   }
-  return getDefaultValue$1(props, propKey, defaultStateValues);
+  return getDefaultValue$1(props, propKey, defaultStateValues2);
 }
 function getInitialState$2(props) {
   var selectedItem = getInitialValue$1(props, "selectedItem");
@@ -11485,49 +11583,49 @@ var commonDropdownPropTypes = _extends({}, commonPropTypes, {
   onIsOpenChange: PropTypes.func,
   scrollIntoView: PropTypes.func
 });
-function downshiftCommonReducer(state, action, stateChangeTypes) {
+function downshiftCommonReducer(state, action, stateChangeTypes2) {
   var type = action.type, props = action.props;
   var changes;
   switch (type) {
-    case stateChangeTypes.ItemMouseMove:
+    case stateChangeTypes2.ItemMouseMove:
       changes = {
         highlightedIndex: action.disabled ? -1 : action.index
       };
       break;
-    case stateChangeTypes.MenuMouseLeave:
+    case stateChangeTypes2.MenuMouseLeave:
       changes = {
         highlightedIndex: -1
       };
       break;
-    case stateChangeTypes.ToggleButtonClick:
-    case stateChangeTypes.FunctionToggleMenu:
+    case stateChangeTypes2.ToggleButtonClick:
+    case stateChangeTypes2.FunctionToggleMenu:
       changes = {
         isOpen: !state.isOpen,
         highlightedIndex: state.isOpen ? -1 : getHighlightedIndexOnOpen(props, state, 0)
       };
       break;
-    case stateChangeTypes.FunctionOpenMenu:
+    case stateChangeTypes2.FunctionOpenMenu:
       changes = {
         isOpen: true,
         highlightedIndex: getHighlightedIndexOnOpen(props, state, 0)
       };
       break;
-    case stateChangeTypes.FunctionCloseMenu:
+    case stateChangeTypes2.FunctionCloseMenu:
       changes = {
         isOpen: false
       };
       break;
-    case stateChangeTypes.FunctionSetHighlightedIndex:
+    case stateChangeTypes2.FunctionSetHighlightedIndex:
       changes = {
         highlightedIndex: props.isItemDisabled(props.items[action.highlightedIndex], action.highlightedIndex) ? -1 : action.highlightedIndex
       };
       break;
-    case stateChangeTypes.FunctionSetInputValue:
+    case stateChangeTypes2.FunctionSetInputValue:
       changes = {
         inputValue: action.inputValue
       };
       break;
-    case stateChangeTypes.FunctionReset:
+    case stateChangeTypes2.FunctionReset:
       changes = {
         highlightedIndex: getDefaultHighlightedIndex(props),
         isOpen: getDefaultValue$1(props, "isOpen"),
@@ -11636,9 +11734,9 @@ var propTypes$1 = _extends({}, commonDropdownPropTypes, {
   inputId: PropTypes.string,
   onInputValueChange: PropTypes.func
 });
-function useControlledReducer(reducer, props, createInitialState, isStateEqual) {
+function useControlledReducer(reducer, props, createInitialState, isStateEqual2) {
   var previousSelectedItemRef = A$1();
-  var _useEnhancedReducer = useEnhancedReducer(reducer, props, createInitialState, isStateEqual), state = _useEnhancedReducer[0], dispatch = _useEnhancedReducer[1];
+  var _useEnhancedReducer = useEnhancedReducer(reducer, props, createInitialState, isStateEqual2), state = _useEnhancedReducer[0], dispatch = _useEnhancedReducer[1];
   var isInitialMount = useIsInitialMount();
   y(function() {
     if (!isControlledProp(props, "selectedItem")) {
@@ -11659,7 +11757,7 @@ function useControlledReducer(reducer, props, createInitialState, isStateEqual)
 }
 var validatePropTypes$1 = noop;
 if (process.env.NODE_ENV !== "production") {
-  validatePropTypes$1 = function validatePropTypes(options2, caller) {
+  validatePropTypes$1 = function validatePropTypes2(options2, caller) {
     PropTypes.checkPropTypes(propTypes$1, options2, "prop", caller.name);
   };
 }
@@ -12106,7 +12204,41 @@ function useCombobox(userProps) {
     inputValue
   };
 }
-({
+var defaultStateValues = {
+  activeIndex: -1,
+  selectedItems: []
+};
+function getInitialValue(props, propKey) {
+  return getInitialValue$1(props, propKey, defaultStateValues);
+}
+function getDefaultValue(props, propKey) {
+  return getDefaultValue$1(props, propKey, defaultStateValues);
+}
+function getInitialState$3(props) {
+  var activeIndex = getInitialValue(props, "activeIndex");
+  var selectedItems = getInitialValue(props, "selectedItems");
+  return {
+    activeIndex,
+    selectedItems
+  };
+}
+function isKeyDownOperationPermitted(event) {
+  if (event.shiftKey || event.metaKey || event.ctrlKey || event.altKey) {
+    return false;
+  }
+  var element = event.target;
+  if (element instanceof HTMLInputElement && // if element is a text input
+  element.value !== "" && // and we have text in it
+  // and cursor is either not at the start or is currently highlighting text.
+  (element.selectionStart !== 0 || element.selectionEnd !== 0)) {
+    return false;
+  }
+  return true;
+}
+function isStateEqual(prevState, newState) {
+  return prevState.selectedItems === newState.selectedItems && prevState.activeIndex === newState.activeIndex;
+}
+var propTypes = {
   stateReducer: commonPropTypes.stateReducer,
   itemToKey: commonPropTypes.itemToKey,
   environment: commonPropTypes.environment,
@@ -12121,26 +12253,312 @@ function useCombobox(userProps) {
   onSelectedItemsChange: PropTypes.func,
   keyNavigationNext: PropTypes.string,
   keyNavigationPrevious: PropTypes.string
-});
-({
+};
+var defaultProps = {
   itemToKey: defaultProps$3.itemToKey,
   stateReducer: defaultProps$3.stateReducer,
-  environment: defaultProps$3.environment
+  environment: defaultProps$3.environment,
+  keyNavigationNext: "ArrowRight",
+  keyNavigationPrevious: "ArrowLeft"
+};
+var validatePropTypes = noop;
+if (process.env.NODE_ENV !== "production") {
+  validatePropTypes = function validatePropTypes2(options2, caller) {
+    PropTypes.checkPropTypes(propTypes, options2, "prop", caller.name);
+  };
+}
+var SelectedItemClick = process.env.NODE_ENV !== "production" ? "__selected_item_click__" : 0;
+var SelectedItemKeyDownDelete = process.env.NODE_ENV !== "production" ? "__selected_item_keydown_delete__" : 1;
+var SelectedItemKeyDownBackspace = process.env.NODE_ENV !== "production" ? "__selected_item_keydown_backspace__" : 2;
+var SelectedItemKeyDownNavigationNext = process.env.NODE_ENV !== "production" ? "__selected_item_keydown_navigation_next__" : 3;
+var SelectedItemKeyDownNavigationPrevious = process.env.NODE_ENV !== "production" ? "__selected_item_keydown_navigation_previous__" : 4;
+var DropdownKeyDownNavigationPrevious = process.env.NODE_ENV !== "production" ? "__dropdown_keydown_navigation_previous__" : 5;
+var DropdownKeyDownBackspace = process.env.NODE_ENV !== "production" ? "__dropdown_keydown_backspace__" : 6;
+var DropdownClick = process.env.NODE_ENV !== "production" ? "__dropdown_click__" : 7;
+var FunctionAddSelectedItem = process.env.NODE_ENV !== "production" ? "__function_add_selected_item__" : 8;
+var FunctionRemoveSelectedItem = process.env.NODE_ENV !== "production" ? "__function_remove_selected_item__" : 9;
+var FunctionSetSelectedItems = process.env.NODE_ENV !== "production" ? "__function_set_selected_items__" : 10;
+var FunctionSetActiveIndex = process.env.NODE_ENV !== "production" ? "__function_set_active_index__" : 11;
+var FunctionReset = process.env.NODE_ENV !== "production" ? "__function_reset__" : 12;
+var stateChangeTypes = /* @__PURE__ */ Object.freeze({
+  __proto__: null,
+  DropdownClick,
+  DropdownKeyDownBackspace,
+  DropdownKeyDownNavigationPrevious,
+  FunctionAddSelectedItem,
+  FunctionRemoveSelectedItem,
+  FunctionReset,
+  FunctionSetActiveIndex,
+  FunctionSetSelectedItems,
+  SelectedItemClick,
+  SelectedItemKeyDownBackspace,
+  SelectedItemKeyDownDelete,
+  SelectedItemKeyDownNavigationNext,
+  SelectedItemKeyDownNavigationPrevious
 });
-if (process.env.NODE_ENV !== "production") ;
-process.env.NODE_ENV !== "production" ? "__selected_item_click__" : 0;
-process.env.NODE_ENV !== "production" ? "__selected_item_keydown_delete__" : 1;
-process.env.NODE_ENV !== "production" ? "__selected_item_keydown_backspace__" : 2;
-process.env.NODE_ENV !== "production" ? "__selected_item_keydown_navigation_next__" : 3;
-process.env.NODE_ENV !== "production" ? "__selected_item_keydown_navigation_previous__" : 4;
-process.env.NODE_ENV !== "production" ? "__dropdown_keydown_navigation_previous__" : 5;
-process.env.NODE_ENV !== "production" ? "__dropdown_keydown_backspace__" : 6;
-process.env.NODE_ENV !== "production" ? "__dropdown_click__" : 7;
-process.env.NODE_ENV !== "production" ? "__function_add_selected_item__" : 8;
-process.env.NODE_ENV !== "production" ? "__function_remove_selected_item__" : 9;
-process.env.NODE_ENV !== "production" ? "__function_set_selected_items__" : 10;
-process.env.NODE_ENV !== "production" ? "__function_set_active_index__" : 11;
-process.env.NODE_ENV !== "production" ? "__function_reset__" : 12;
+function downshiftMultipleSelectionReducer(state, action) {
+  var type = action.type, index = action.index, props = action.props, selectedItem = action.selectedItem;
+  var activeIndex = state.activeIndex, selectedItems = state.selectedItems;
+  var changes;
+  switch (type) {
+    case SelectedItemClick:
+      changes = {
+        activeIndex: index
+      };
+      break;
+    case SelectedItemKeyDownNavigationPrevious:
+      changes = {
+        activeIndex: activeIndex - 1 < 0 ? 0 : activeIndex - 1
+      };
+      break;
+    case SelectedItemKeyDownNavigationNext:
+      changes = {
+        activeIndex: activeIndex + 1 >= selectedItems.length ? -1 : activeIndex + 1
+      };
+      break;
+    case SelectedItemKeyDownBackspace:
+    case SelectedItemKeyDownDelete: {
+      if (activeIndex < 0) {
+        break;
+      }
+      var newActiveIndex = activeIndex;
+      if (selectedItems.length === 1) {
+        newActiveIndex = -1;
+      } else if (activeIndex === selectedItems.length - 1) {
+        newActiveIndex = selectedItems.length - 2;
+      }
+      changes = _extends({
+        selectedItems: [].concat(selectedItems.slice(0, activeIndex), selectedItems.slice(activeIndex + 1))
+      }, {
+        activeIndex: newActiveIndex
+      });
+      break;
+    }
+    case DropdownKeyDownNavigationPrevious:
+      changes = {
+        activeIndex: selectedItems.length - 1
+      };
+      break;
+    case DropdownKeyDownBackspace:
+      changes = {
+        selectedItems: selectedItems.slice(0, selectedItems.length - 1)
+      };
+      break;
+    case FunctionAddSelectedItem:
+      changes = {
+        selectedItems: [].concat(selectedItems, [selectedItem])
+      };
+      break;
+    case DropdownClick:
+      changes = {
+        activeIndex: -1
+      };
+      break;
+    case FunctionRemoveSelectedItem: {
+      var _newActiveIndex = activeIndex;
+      var selectedItemIndex = selectedItems.findIndex(function(item) {
+        return props.itemToKey(item) === props.itemToKey(selectedItem);
+      });
+      if (selectedItemIndex < 0) {
+        break;
+      }
+      if (selectedItems.length === 1) {
+        _newActiveIndex = -1;
+      } else if (selectedItemIndex === selectedItems.length - 1) {
+        _newActiveIndex = selectedItems.length - 2;
+      }
+      changes = {
+        selectedItems: [].concat(selectedItems.slice(0, selectedItemIndex), selectedItems.slice(selectedItemIndex + 1)),
+        activeIndex: _newActiveIndex
+      };
+      break;
+    }
+    case FunctionSetSelectedItems: {
+      var newSelectedItems = action.selectedItems;
+      changes = {
+        selectedItems: newSelectedItems
+      };
+      break;
+    }
+    case FunctionSetActiveIndex: {
+      var _newActiveIndex2 = action.activeIndex;
+      changes = {
+        activeIndex: _newActiveIndex2
+      };
+      break;
+    }
+    case FunctionReset:
+      changes = {
+        activeIndex: getDefaultValue(props, "activeIndex"),
+        selectedItems: getDefaultValue(props, "selectedItems")
+      };
+      break;
+    default:
+      throw new Error("Reducer called without proper action type.");
+  }
+  return _extends({}, state, changes);
+}
+var _excluded = ["refKey", "ref", "onClick", "onKeyDown", "selectedItem", "index"], _excluded2 = ["refKey", "ref", "onKeyDown", "onClick", "preventKeyAction"];
+useMultipleSelection.stateChangeTypes = stateChangeTypes;
+function useMultipleSelection(userProps) {
+  if (userProps === void 0) {
+    userProps = {};
+  }
+  validatePropTypes(userProps, useMultipleSelection);
+  var props = _extends({}, defaultProps, userProps);
+  var getA11yStatusMessage = props.getA11yStatusMessage, environment = props.environment, keyNavigationNext = props.keyNavigationNext, keyNavigationPrevious = props.keyNavigationPrevious;
+  var _useControlledReducer = useControlledReducer$1(downshiftMultipleSelectionReducer, props, getInitialState$3, isStateEqual), state = _useControlledReducer[0], dispatch = _useControlledReducer[1];
+  var activeIndex = state.activeIndex, selectedItems = state.selectedItems;
+  var isInitialMount = useIsInitialMount();
+  var dropdownRef = A$1(null);
+  var selectedItemRefs = A$1();
+  selectedItemRefs.current = [];
+  var latest = useLatestRef({
+    state,
+    props
+  });
+  useA11yMessageStatus(getA11yStatusMessage, state, [activeIndex, selectedItems], environment);
+  y(function() {
+    if (isInitialMount) {
+      return;
+    }
+    if (activeIndex === -1 && dropdownRef.current) {
+      dropdownRef.current.focus();
+    } else if (selectedItemRefs.current[activeIndex]) {
+      selectedItemRefs.current[activeIndex].focus();
+    }
+  }, [activeIndex]);
+  useControlPropsValidator({
+    props,
+    state
+  });
+  var setGetterPropCallInfo = useGetterPropsCalledChecker("getDropdownProps");
+  var selectedItemKeyDownHandlers = T$1(function() {
+    var _ref;
+    return _ref = {}, _ref[keyNavigationPrevious] = function() {
+      dispatch({
+        type: SelectedItemKeyDownNavigationPrevious
+      });
+    }, _ref[keyNavigationNext] = function() {
+      dispatch({
+        type: SelectedItemKeyDownNavigationNext
+      });
+    }, _ref.Delete = function Delete() {
+      dispatch({
+        type: SelectedItemKeyDownDelete
+      });
+    }, _ref.Backspace = function Backspace() {
+      dispatch({
+        type: SelectedItemKeyDownBackspace
+      });
+    }, _ref;
+  }, [dispatch, keyNavigationNext, keyNavigationPrevious]);
+  var dropdownKeyDownHandlers = T$1(function() {
+    var _ref2;
+    return _ref2 = {}, _ref2[keyNavigationPrevious] = function(event) {
+      if (isKeyDownOperationPermitted(event)) {
+        dispatch({
+          type: DropdownKeyDownNavigationPrevious
+        });
+      }
+    }, _ref2.Backspace = function Backspace(event) {
+      if (isKeyDownOperationPermitted(event)) {
+        dispatch({
+          type: DropdownKeyDownBackspace
+        });
+      }
+    }, _ref2;
+  }, [dispatch, keyNavigationPrevious]);
+  var getSelectedItemProps = q$1(function(_temp) {
+    var _extends2;
+    var _ref3 = _temp === void 0 ? {} : _temp, _ref3$refKey = _ref3.refKey, refKey = _ref3$refKey === void 0 ? "ref" : _ref3$refKey, ref = _ref3.ref, onClick = _ref3.onClick, onKeyDown = _ref3.onKeyDown, selectedItemProp = _ref3.selectedItem, indexProp = _ref3.index, rest = _objectWithoutPropertiesLoose(_ref3, _excluded);
+    var latestState = latest.current.state;
+    var _getItemAndIndex = getItemAndIndex(selectedItemProp, indexProp, latestState.selectedItems, "Pass either item or index to getSelectedItemProps!"), index = _getItemAndIndex[1];
+    var isFocusable = index > -1 && index === latestState.activeIndex;
+    var selectedItemHandleClick = function selectedItemHandleClick2() {
+      dispatch({
+        type: SelectedItemClick,
+        index
+      });
+    };
+    var selectedItemHandleKeyDown = function selectedItemHandleKeyDown2(event) {
+      var key = normalizeArrowKey(event);
+      if (key && selectedItemKeyDownHandlers[key]) {
+        selectedItemKeyDownHandlers[key](event);
+      }
+    };
+    return _extends((_extends2 = {}, _extends2[refKey] = handleRefs(ref, function(selectedItemNode) {
+      if (selectedItemNode) {
+        selectedItemRefs.current.push(selectedItemNode);
+      }
+    }), _extends2.tabIndex = isFocusable ? 0 : -1, _extends2.onClick = callAllEventHandlers(onClick, selectedItemHandleClick), _extends2.onKeyDown = callAllEventHandlers(onKeyDown, selectedItemHandleKeyDown), _extends2), rest);
+  }, [dispatch, latest, selectedItemKeyDownHandlers]);
+  var getDropdownProps = q$1(function(_temp2, _temp3) {
+    var _extends3;
+    var _ref4 = _temp2 === void 0 ? {} : _temp2, _ref4$refKey = _ref4.refKey, refKey = _ref4$refKey === void 0 ? "ref" : _ref4$refKey, ref = _ref4.ref, onKeyDown = _ref4.onKeyDown, onClick = _ref4.onClick, _ref4$preventKeyActio = _ref4.preventKeyAction, preventKeyAction = _ref4$preventKeyActio === void 0 ? false : _ref4$preventKeyActio, rest = _objectWithoutPropertiesLoose(_ref4, _excluded2);
+    var _ref5 = _temp3 === void 0 ? {} : _temp3, _ref5$suppressRefErro = _ref5.suppressRefError, suppressRefError = _ref5$suppressRefErro === void 0 ? false : _ref5$suppressRefErro;
+    setGetterPropCallInfo("getDropdownProps", suppressRefError, refKey, dropdownRef);
+    var dropdownHandleKeyDown = function dropdownHandleKeyDown2(event) {
+      var key = normalizeArrowKey(event);
+      if (key && dropdownKeyDownHandlers[key]) {
+        dropdownKeyDownHandlers[key](event);
+      }
+    };
+    var dropdownHandleClick = function dropdownHandleClick2() {
+      dispatch({
+        type: DropdownClick
+      });
+    };
+    return _extends((_extends3 = {}, _extends3[refKey] = handleRefs(ref, function(dropdownNode) {
+      if (dropdownNode) {
+        dropdownRef.current = dropdownNode;
+      }
+    }), _extends3), !preventKeyAction && {
+      onKeyDown: callAllEventHandlers(onKeyDown, dropdownHandleKeyDown),
+      onClick: callAllEventHandlers(onClick, dropdownHandleClick)
+    }, rest);
+  }, [dispatch, dropdownKeyDownHandlers, setGetterPropCallInfo]);
+  var addSelectedItem = q$1(function(selectedItem) {
+    dispatch({
+      type: FunctionAddSelectedItem,
+      selectedItem
+    });
+  }, [dispatch]);
+  var removeSelectedItem = q$1(function(selectedItem) {
+    dispatch({
+      type: FunctionRemoveSelectedItem,
+      selectedItem
+    });
+  }, [dispatch]);
+  var setSelectedItems = q$1(function(newSelectedItems) {
+    dispatch({
+      type: FunctionSetSelectedItems,
+      selectedItems: newSelectedItems
+    });
+  }, [dispatch]);
+  var setActiveIndex = q$1(function(newActiveIndex) {
+    dispatch({
+      type: FunctionSetActiveIndex,
+      activeIndex: newActiveIndex
+    });
+  }, [dispatch]);
+  var reset = q$1(function() {
+    dispatch({
+      type: FunctionReset
+    });
+  }, [dispatch]);
+  return {
+    getSelectedItemProps,
+    getDropdownProps,
+    addSelectedItem,
+    removeSelectedItem,
+    setSelectedItems,
+    setActiveIndex,
+    reset,
+    selectedItems,
+    activeIndex
+  };
+}
 function DownshiftCombobox({
   allItems,
   value,
@@ -12934,12 +13352,35 @@ const sequenceTypeFromSegment = (possibleSegment, referenceGenome) => {
   return void 0;
 };
 const parseAndValidateMutation = (value, referenceGenome) => {
+  const possibleMutation = parseMutation(value, referenceGenome);
+  if (possibleMutation === null) {
+    return null;
+  }
+  const sequenceType = getSequenceType(possibleMutation.type);
+  const isOutside = isOutsideReferenceGenome(possibleMutation.value, referenceGenome, sequenceType);
+  if (isOutside) {
+    return null;
+  }
+  return possibleMutation;
+};
+const getSequenceType = (type) => {
+  switch (type) {
+    case "nucleotideInsertions":
+    case "nucleotideMutations":
+      return "nucleotide";
+    case "aminoAcidInsertions":
+    case "aminoAcidMutations":
+      return "amino acid";
+  }
+};
+const parseMutation = (value, referenceGenome) => {
   const possibleInsertion = InsertionClass.parse(value);
   if (possibleInsertion !== null) {
     const sequenceType = sequenceTypeFromSegment(possibleInsertion.segment, referenceGenome);
     switch (sequenceType) {
-      case "nucleotide":
+      case "nucleotide": {
         return { type: "nucleotideInsertions", value: possibleInsertion };
+      }
       case "amino acid":
         return { type: "aminoAcidInsertions", value: possibleInsertion };
       case void 0:
@@ -12962,16 +13403,41 @@ const parseAndValidateMutation = (value, referenceGenome) => {
   if (possibleSubstitution !== null) {
     const sequenceType = sequenceTypeFromSegment(possibleSubstitution.segment, referenceGenome);
     switch (sequenceType) {
-      case "nucleotide":
+      case "nucleotide": {
         return { type: "nucleotideMutations", value: possibleSubstitution };
-      case "amino acid":
+      }
+      case "amino acid": {
         return { type: "aminoAcidMutations", value: possibleSubstitution };
+      }
       case void 0:
         return null;
     }
   }
   return null;
 };
+function isOutsideReferenceGenome(mutation, referenceGenome, sequenceType) {
+  const lengthOfSegment = getLengthOfSegment(mutation.segment, referenceGenome, sequenceType);
+  if (lengthOfSegment === void 0) {
+    return true;
+  }
+  return mutation.position >= lengthOfSegment;
+}
+function getLengthOfSegment(segment, referenceGenome, sequenceType) {
+  var _a, _b, _c;
+  switch (sequenceType) {
+    case "nucleotide": {
+      if (referenceGenome.nucleotideSequences.length === 1) {
+        return (_a = referenceGenome.nucleotideSequences.at(0)) == null ? void 0 : _a.sequence.length;
+      }
+      return (_b = referenceGenome.nucleotideSequences.find(
+        (sequence) => sequence.name.toUpperCase() === (segment == null ? void 0 : segment.toUpperCase())
+      )) == null ? void 0 : _b.sequence.length;
+    }
+    case "amino acid": {
+      return (_c = referenceGenome.genes.find((gene) => gene.name.toUpperCase() === (segment == null ? void 0 : segment.toUpperCase()))) == null ? void 0 : _c.sequence.length;
+    }
+  }
+}
 const mutationFilterInnerPropsSchema = z$2.object({
   initialValue: z$2.union([mutationsFilterSchema.optional(), z$2.array(z$2.string()), z$2.undefined()])
 });
@@ -12983,38 +13449,30 @@ const MutationFilter = (props) => {
   return /* @__PURE__ */ u$1(
     ErrorBoundary,
     {
-      size: { height: "3.375rem", width },
+      size: { height: "40px", width },
       layout: "horizontal",
       schema: mutationFilterPropsSchema,
       componentProps: props,
-      children: /* @__PURE__ */ u$1("div", { style: width, children: /* @__PURE__ */ u$1(MutationFilterInner, { initialValue }) })
+      children: /* @__PURE__ */ u$1("div", { style: { width }, children: /* @__PURE__ */ u$1(MutationFilterInner, { initialValue }) })
     }
   );
 };
-const MutationFilterInner = ({ initialValue }) => {
+function MutationFilterInner({ initialValue }) {
+  var _a;
   const referenceGenome = x$1(ReferenceGenomeContext);
-  const [selectedFilters, setSelectedFilters] = d(
-    getInitialState(initialValue, referenceGenome)
-  );
   const filterRef = A$1(null);
-  if (referenceGenome.nucleotideSequences.length === 0 && referenceGenome.genes.length === 0) {
-    throw new UserFacingError(
-      "No reference sequences available",
-      "This organism has neither nucleotide nor amino acid sequences configured in its reference genome. You cannot filter by mutations."
-    );
-  }
-  const handleRemoveValue = (option) => {
-    const newSelectedFilters = {
-      ...selectedFilters,
-      [option.type]: selectedFilters[option.type].filter((i2) => option.value.toString() != i2.toString())
-    };
-    setSelectedFilters(newSelectedFilters);
-    fireChangeEvent(newSelectedFilters);
-  };
-  const fireChangeEvent = (selectedFilters2) => {
-    var _a;
-    const detail = mapToMutationFilterStrings(selectedFilters2);
-    (_a = filterRef.current) == null ? void 0 : _a.dispatchEvent(
+  const [inputValue, setInputValue] = d("");
+  const initialState = T$1(() => {
+    return getInitialState(initialValue, referenceGenome);
+  }, [initialValue, referenceGenome]);
+  const [selectedItems, setSelectedItems] = d(initialState);
+  const [itemCandidate, setItemCandidate] = d(null);
+  const [showErrorIndicator, setShowErrorIndicator] = d(false);
+  const items = itemCandidate ? [itemCandidate] : [];
+  const fireChangeEvent = (selectedFilters) => {
+    var _a2;
+    const detail = mapToMutationFilterStrings(selectedFilters);
+    (_a2 = filterRef.current) == null ? void 0 : _a2.dispatchEvent(
       new CustomEvent("gs-mutation-filter-changed", {
         detail,
         bubbles: true,
@@ -13022,152 +13480,155 @@ const MutationFilterInner = ({ initialValue }) => {
       })
     );
   };
-  return /* @__PURE__ */ u$1("div", { className: "w-full border border-gray-300 rounded-md relative", ref: filterRef, children: [
-    /* @__PURE__ */ u$1("div", { className: "absolute -top-3 -right-3 z-10", children: /* @__PURE__ */ u$1(MutationFilterInfo, {}) }),
-    /* @__PURE__ */ u$1("div", { className: "relative w-full p-1", children: [
-      /* @__PURE__ */ u$1(
-        MutationFilterSelector,
-        {
-          referenceGenome,
-          setSelectedFilters: (newSelectedFilters) => {
-            setSelectedFilters(newSelectedFilters);
-            fireChangeEvent(newSelectedFilters);
-          },
-          selectedFilters
-        }
-      ),
-      /* @__PURE__ */ u$1(
-        SelectedMutationFilterDisplay,
-        {
-          selectedFilters,
-          handleRemoveValue
-        }
-      )
-    ] })
-  ] });
-};
-function getInitialState(initialValue, referenceGenome) {
-  if (initialValue === void 0) {
-    return {
-      nucleotideMutations: [],
-      aminoAcidMutations: [],
-      nucleotideInsertions: [],
-      aminoAcidInsertions: []
-    };
-  }
-  const values = Array.isArray(initialValue) ? initialValue : Object.values(initialValue).flatMap((it) => it);
-  return values.reduce(
-    (selectedFilters, value) => {
-      const parsedMutation = parseAndValidateMutation(value, referenceGenome);
-      if (parsedMutation === null) {
-        return selectedFilters;
-      }
-      return {
-        ...selectedFilters,
-        [parsedMutation.type]: [...selectedFilters[parsedMutation.type], parsedMutation.value]
-      };
-    },
-    {
-      nucleotideMutations: [],
-      aminoAcidMutations: [],
-      nucleotideInsertions: [],
-      aminoAcidInsertions: []
+  const handleSelectedItemsChanged = (newSelectedItems) => {
+    fireChangeEvent(newSelectedItems);
+    setSelectedItems(newSelectedItems);
+  };
+  const handleNewSelectedItem = (selectedItem2) => {
+    if (selectedItem2) {
+      handleSelectedItemsChanged([...selectedItems, selectedItem2]);
+      setInputValue("");
+      setItemCandidate(null);
+      setShowErrorIndicator(false);
     }
-  );
-}
-const MutationFilterSelector = ({ referenceGenome, setSelectedFilters, selectedFilters }) => {
-  const [option, setOption] = d(null);
-  const [inputValue, setInputValue] = d("");
-  const selectorRef = A$1(null);
-  const handleInputChange = (newValue) => {
-    if (newValue.includes(",") || newValue.includes(";")) {
-      handleCommaSeparatedInput(newValue);
+  };
+  const handleInputChange = (newInputValue) => {
+    setShowErrorIndicator(false);
+    if (newInputValue == null ? void 0 : newInputValue.includes(",")) {
+      const values = newInputValue == null ? void 0 : newInputValue.split(",").map((value) => {
+        return { value, parsedValue: parseAndValidateMutation(value.trim(), referenceGenome) };
+      });
+      const validEntries = values.map((value) => value.parsedValue).filter((value) => value !== null);
+      const invalidInput = values.filter((value) => value.parsedValue === null).map((value) => value.value.trim()).join(",");
+      const selectedItemCandidates = [...selectedItems, ...validEntries];
+      handleSelectedItemsChanged(extractUniqueValues(selectedItemCandidates));
+      setInputValue(invalidInput);
+      setItemCandidate(null);
     } else {
-      setInputValue(newValue);
-      const result = parseAndValidateMutation(newValue, referenceGenome);
-      setOption(result);
-    }
-  };
-  const handleCommaSeparatedInput = (inputValue2) => {
-    const inputValues = inputValue2.split(/[,;]/);
-    let newSelectedOptions = selectedFilters;
-    let updated = false;
-    const invalidQueries = [];
-    for (const value of inputValues) {
-      const trimmedValue = value.trim();
-      const parsedMutation = parseAndValidateMutation(trimmedValue, referenceGenome);
-      if (parsedMutation) {
-        const type = parsedMutation.type;
-        if (!selectedFilters[type].some((i2) => parsedMutation.value.toString() === i2.toString())) {
-          newSelectedOptions = {
-            ...newSelectedOptions,
-            [parsedMutation.type]: [...newSelectedOptions[parsedMutation.type], parsedMutation.value]
-          };
-          updated = true;
+      setInputValue(newInputValue ?? "");
+      if (newInputValue !== void 0) {
+        const candidate = parseAndValidateMutation(newInputValue, referenceGenome);
+        const alreadyExists = selectedItems.find(
+          (selectedItem2) => selectedItem2.value.code === (candidate == null ? void 0 : candidate.value.code)
+        );
+        if (!alreadyExists) {
+          setItemCandidate(candidate);
         }
-      } else {
-        invalidQueries.push(trimmedValue);
       }
     }
-    setInputValue(invalidQueries.join(","));
-    if (updated) {
-      setSelectedFilters(newSelectedOptions);
-      setOption(null);
-    }
   };
-  const handleOptionClick = () => {
-    if (option === null) {
-      return;
-    }
-    const type = option.type;
-    if (!selectedFilters[type].some((i2) => option.value.toString() === i2.toString())) {
-      const newSelectedValues = {
-        ...selectedFilters,
-        [option == null ? void 0 : option.type]: [...selectedFilters[option == null ? void 0 : option.type], option == null ? void 0 : option.value]
-      };
-      setSelectedFilters(newSelectedValues);
-    }
-    setInputValue("");
-    setOption(null);
-  };
-  const handleEnterPress = (event) => {
-    if (event.key === "Enter" && option !== null) {
-      handleOptionClick();
-    }
-  };
-  const handleBlur = (event) => {
-    var _a;
-    if (!((_a = selectorRef.current) == null ? void 0 : _a.contains(event.relatedTarget))) {
-      setOption(null);
-    }
-  };
-  return /* @__PURE__ */ u$1("div", { ref: selectorRef, tabIndex: -1, children: [
-    /* @__PURE__ */ u$1(
-      "input",
-      {
-        type: "text",
-        className: "w-full p-2 border-gray-300 border rounded-md",
-        placeholder: getPlaceholder(referenceGenome),
-        value: inputValue,
-        onInput: (e2) => {
-          handleInputChange(e2.target.value);
-        },
-        onKeyDown: (e2) => handleEnterPress(e2),
-        onFocus: () => handleInputChange(inputValue),
-        onBlur: handleBlur
+  const shadowRoot = ((_a = filterRef.current) == null ? void 0 : _a.shadowRoot) ?? void 0;
+  const environment = shadowRoot !== void 0 ? {
+    addEventListener: window.addEventListener.bind(window),
+    removeEventListener: window.removeEventListener.bind(window),
+    document: shadowRoot.ownerDocument,
+    Node: window.Node
+  } : void 0;
+  const { getDropdownProps, removeSelectedItem } = useMultipleSelection({
+    selectedItems,
+    onStateChange({ selectedItems: newSelectedItems, type }) {
+      switch (type) {
+        case useMultipleSelection.stateChangeTypes.FunctionRemoveSelectedItem:
+          handleSelectedItemsChanged(newSelectedItems ?? []);
+          break;
       }
-    ),
-    option != null && /* @__PURE__ */ u$1(
-      "div",
+    },
+    environment
+  });
+  const { isOpen, getMenuProps, getInputProps, highlightedIndex, getItemProps, selectedItem } = useCombobox({
+    items,
+    itemToString(item) {
+      return item ? item.value.code : "";
+    },
+    defaultHighlightedIndex: 0,
+    inputValue,
+    onStateChange({ inputValue: newInputValue, type, selectedItem: newSelectedItem }) {
+      switch (type) {
+        case useCombobox.stateChangeTypes.InputKeyDownEnter:
+        case useCombobox.stateChangeTypes.ItemClick:
+        case useCombobox.stateChangeTypes.InputBlur:
+          handleNewSelectedItem(newSelectedItem);
+          break;
+        case useCombobox.stateChangeTypes.InputChange: {
+          handleInputChange(newInputValue);
+          break;
+        }
+      }
+    },
+    environment
+  });
+  if (referenceGenome.nucleotideSequences.length === 0 && referenceGenome.genes.length === 0) {
+    throw new UserFacingError(
+      "No reference sequences available",
+      "This organism has neither nucleotide nor amino acid sequences configured in its reference genome. You cannot filter by mutations."
+    );
+  }
+  return /* @__PURE__ */ u$1("div", { className: "w-full", ref: filterRef, children: [
+    /* @__PURE__ */ u$1("div", { className: `flex gap-x-1 flex-wrap p-1 input h-fit w-full ${showErrorIndicator ? "input-error" : ""}`, children: [
+      selectedItems.map((selectedItemForRender, index) => {
+        return /* @__PURE__ */ u$1("div", { className: "my-1", children: /* @__PURE__ */ u$1(
+          SelectedFilter,
+          {
+            handleRemoveValue: () => {
+              removeSelectedItem(selectedItemForRender);
+            },
+            mutationFilter: selectedItemForRender
+          }
+        ) }, `selected-item-${index}`);
+      }),
+      /* @__PURE__ */ u$1("div", { className: "flex gap-0.5 grow p-1", children: [
+        /* @__PURE__ */ u$1(
+          "input",
+          {
+            placeholder: getPlaceholder(referenceGenome),
+            className: "w-full focus:outline-none min-w-8",
+            ...getInputProps(getDropdownProps({ preventKeyAction: isOpen })),
+            onBlur: () => {
+              setShowErrorIndicator(inputValue !== "");
+            },
+            size: 10
+          }
+        ),
+        /* @__PURE__ */ u$1(MutationFilterInfo, {})
+      ] })
+    ] }),
+    /* @__PURE__ */ u$1(
+      "ul",
       {
-        role: "option",
-        className: "hover:bg-gray-300 absolute cursor-pointer p-2 border-1 border-slate-500 bg-slate-200",
-        onClick: () => handleOptionClick(),
-        children: option.value.toString()
+        className: `absolute w-inherit bg-white mt-1 shadow-md max-h-80 overflow-scroll p-0 z-10 ${!isOpen && "hidden"}`,
+        ...getMenuProps(),
+        children: items.map((item, index) => /* @__PURE__ */ u$1(
+          "li",
+          {
+            className: `${highlightedIndex === index && "bg-blue-300"} ${selectedItem === item && "font-bold"} py-2 px-3 shadow-sm flex flex-col cursor-pointer`,
+            ...getItemProps({ item, index }),
+            style: {
+              backgroundColor: backgroundColorMap(item, highlightedIndex === index ? 0.4 : 0.2)
+            },
+            children: /* @__PURE__ */ u$1("span", { children: item.value.code })
+          },
+          `${item.value.code}${index}`
+        ))
       }
     )
   ] });
-};
+}
+function extractUniqueValues(newSelectedItems) {
+  const uniqueMutationsMap = /* @__PURE__ */ new Map();
+  for (const mutation of newSelectedItems) {
+    if (!uniqueMutationsMap.has(mutation.value.code)) {
+      uniqueMutationsMap.set(mutation.value.code, mutation);
+    }
+  }
+  return Array.from(uniqueMutationsMap.values());
+}
+function getInitialState(initialValue, referenceGenome) {
+  if (initialValue === void 0) {
+    return [];
+  }
+  const values = Array.isArray(initialValue) ? initialValue : Object.values(initialValue).flatMap((it) => it);
+  return values.map((value) => parseAndValidateMutation(value, referenceGenome)).filter((parsedMutation) => parsedMutation !== null);
+}
 function getPlaceholder(referenceGenome) {
   const nucleotideSubstitution = getExampleMutation(referenceGenome, "nucleotide", "substitution");
   const nucleotideInsertion = getExampleMutation(referenceGenome, "nucleotide", "insertion");
@@ -13176,74 +13637,63 @@ function getPlaceholder(referenceGenome) {
   const exampleMutations = [nucleotideSubstitution, nucleotideInsertion, aminoAcidSubstitution, aminoAcidInsertion].filter((example) => example !== "").join(", ");
   return `Enter a mutation (e.g. ${exampleMutations})`;
 }
-const backgroundColor = {
-  aminoAcidMutations: singleGraphColorRGBByName("teal", 0.4),
-  nucleotideMutations: singleGraphColorRGBByName("green", 0.4),
-  aminoAcidInsertions: singleGraphColorRGBByName("purple", 0.4),
-  nucleotideInsertions: singleGraphColorRGBByName("indigo", 0.4)
-};
-const backgroundColorMap = (data) => {
-  return backgroundColor[data.type] || "lightgray";
-};
-const SelectedMutationFilterDisplay = ({ selectedFilters, handleRemoveValue }) => {
-  return /* @__PURE__ */ u$1("div", { className: "flex flex-wrap", children: [
-    selectedFilters.nucleotideMutations.map((mutation) => /* @__PURE__ */ u$1(
-      SelectedFilter,
-      {
-        handleRemoveValue,
-        mutationFilter: { type: "nucleotideMutations", value: mutation }
-      },
-      mutation.toString()
-    )),
-    selectedFilters.aminoAcidMutations.map((mutation) => /* @__PURE__ */ u$1(
-      SelectedFilter,
-      {
-        handleRemoveValue,
-        mutationFilter: { type: "aminoAcidMutations", value: mutation }
-      },
-      mutation.toString()
-    )),
-    selectedFilters.nucleotideInsertions.map((mutation) => /* @__PURE__ */ u$1(
-      SelectedFilter,
-      {
-        handleRemoveValue,
-        mutationFilter: { type: "nucleotideInsertions", value: mutation }
-      },
-      mutation.toString()
-    )),
-    selectedFilters.aminoAcidInsertions.map((mutation) => /* @__PURE__ */ u$1(
-      SelectedFilter,
-      {
-        handleRemoveValue,
-        mutationFilter: { type: "aminoAcidInsertions", value: mutation }
-      },
-      mutation.toString()
-    ))
-  ] });
+const backgroundColorMap = (data, alpha = 0.4) => {
+  switch (data.type) {
+    case "nucleotideMutations":
+      return singleGraphColorRGBByName("green", alpha);
+    case "aminoAcidMutations":
+      return singleGraphColorRGBByName("teal", alpha);
+    case "nucleotideInsertions":
+      return singleGraphColorRGBByName("indigo", alpha);
+    case "aminoAcidInsertions":
+      return singleGraphColorRGBByName("purple", alpha);
+  }
 };
 const SelectedFilter = ({ handleRemoveValue, mutationFilter }) => {
   return /* @__PURE__ */ u$1(
     "span",
     {
-      className: "center p-2 m-1 inline-flex text-black rounded-md",
+      className: "center px-2 py-1 inline-flex text-black rounded-md",
       style: {
         backgroundColor: backgroundColorMap(mutationFilter)
       },
       children: [
         mutationFilter.value.toString(),
-        /* @__PURE__ */ u$1("button", { className: "ml-1 cursor-pointer", onClick: () => handleRemoveValue(mutationFilter), children: "×" })
+        /* @__PURE__ */ u$1(
+          "button",
+          {
+            className: "ml-1 cursor-pointer",
+            "aria-label": `remove mutation filter ${mutationFilter.value.code}`,
+            onClick: () => handleRemoveValue(mutationFilter),
+            children: "×"
+          }
+        )
       ]
     },
     mutationFilter.value.toString()
   );
 };
 function mapToMutationFilterStrings(selectedFilters) {
-  return {
-    aminoAcidMutations: selectedFilters.aminoAcidMutations.map((mutation) => mutation.toString()),
-    nucleotideMutations: selectedFilters.nucleotideMutations.map((mutation) => mutation.toString()),
-    aminoAcidInsertions: selectedFilters.aminoAcidInsertions.map((insertion) => insertion.toString()),
-    nucleotideInsertions: selectedFilters.nucleotideInsertions.map((insertion) => insertion.toString())
-  };
+  return selectedFilters.reduce(
+    (acc, filter) => {
+      switch (filter.type) {
+        case "nucleotideMutations":
+          return { ...acc, nucleotideMutations: [...acc.nucleotideMutations, filter.value.toString()] };
+        case "aminoAcidMutations":
+          return { ...acc, aminoAcidMutations: [...acc.aminoAcidMutations, filter.value.toString()] };
+        case "nucleotideInsertions":
+          return { ...acc, nucleotideInsertions: [...acc.nucleotideInsertions, filter.value.toString()] };
+        case "aminoAcidInsertions":
+          return { ...acc, aminoAcidInsertions: [...acc.aminoAcidInsertions, filter.value.toString()] };
+      }
+    },
+    {
+      aminoAcidMutations: [],
+      nucleotideMutations: [],
+      aminoAcidInsertions: [],
+      nucleotideInsertions: []
+    }
+  );
 }
 var __defProp$1 = Object.defineProperty;
 var __getOwnPropDesc$1 = Object.getOwnPropertyDescriptor;