@genspectrum/dashboard-components 0.18.5 → 0.18.6
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +12 -0
- package/custom-elements.json +1 -1
- package/dist/components.d.ts +16 -16
- package/dist/components.js +765 -315
- package/dist/components.js.map +1 -1
- package/dist/style.css +2 -2
- package/dist/util.d.ts +16 -16
- package/package.json +2 -2
- package/src/preact/MutationAnnotationsContext.tsx +34 -27
- package/src/preact/components/dropdown.tsx +1 -1
- package/src/preact/components/info.tsx +1 -1
- package/src/preact/components/mutations-over-time-text-filter.stories.tsx +57 -0
- package/src/preact/components/mutations-over-time-text-filter.tsx +63 -0
- package/src/preact/components/segment-selector.tsx +1 -1
- package/src/preact/mutationFilter/mutation-filter.stories.tsx +169 -50
- package/src/preact/mutationFilter/mutation-filter.tsx +239 -234
- package/src/preact/mutationFilter/parseAndValidateMutation.ts +62 -10
- package/src/preact/mutationFilter/parseMutation.spec.ts +62 -47
- package/src/preact/mutationsOverTime/getFilteredMutationsOverTime.spec.ts +128 -0
- package/src/preact/mutationsOverTime/getFilteredMutationsOverTimeData.ts +39 -2
- package/src/preact/mutationsOverTime/mutations-over-time-grid.tsx +8 -11
- package/src/preact/mutationsOverTime/mutations-over-time.stories.tsx +27 -0
- package/src/preact/mutationsOverTime/mutations-over-time.tsx +26 -5
- package/src/preact/shared/tanstackTable/pagination-context.tsx +30 -0
- package/src/preact/shared/tanstackTable/pagination.tsx +19 -6
- package/src/preact/shared/tanstackTable/tanstackTable.tsx +17 -3
- package/src/preact/wastewater/mutationsOverTime/wastewater-mutations-over-time.stories.tsx +19 -1
- package/src/preact/wastewater/mutationsOverTime/wastewater-mutations-over-time.tsx +6 -1
- package/src/web-components/input/gs-mutation-filter.stories.ts +4 -4
- package/src/web-components/visualization/gs-prevalence-over-time.stories.ts +1 -1
- package/standalone-bundle/dashboard-components.js +12896 -13366
- package/standalone-bundle/dashboard-components.js.map +1 -1
- package/standalone-bundle/style.css +1 -1
package/README.md
CHANGED
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@@ -20,6 +20,18 @@ Usage with a bundler in HTML:
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</body>
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```
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**Note for vite (and potentially other bundlers) users**:
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There is currently an issue with one of our peer dependencies: leaflet.
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Vite will use the commonjs style of leaflet, which will create an error, when you run it in the browser.
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`Uncaught SyntaxError: The requested module ... doesn't provide an export named: 'geoJson'`
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To fix this add the following to your `vite.config.js`:
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```js
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optimizeDeps: {
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include: ['leaflet'];
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}
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```
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We also provide a standalone version of the components that can be used without installing the dependencies:
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```html
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package/custom-elements.json
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"type": {
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"text": "StoryObj<MutationFilterProps>"
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},
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"default": "{ ...Template, args: { ...Template.args, initialValue: ['seg1:
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"default": "{ ...Template, args: { ...Template.args, initialValue: ['seg1:3T', 'gene2:4', 'ins_seg2:4:AAA'], }, parameters: { fetchMock: { mocks: [ { matcher: { name: 'referenceGenome', url: REFERENCE_GENOME_ENDPOINT, }, response: { status: 200, body: { nucleotideSequences: [ { name: 'seg1', sequence: 'dummy', }, { name: 'seg2', sequence: 'dummy', }, ], genes: [ { name: 'gene1', sequence: 'dummy', }, { name: 'gene2', sequence: 'dummy', }, ], }, }, options: { overwriteRoutes: false, }, }, ], }, }, play: async ({ canvasElement }) => { const canvas = await withinShadowRoot(canvasElement, 'gs-mutation-filter'); const inputField = () => canvas.getByPlaceholderText('Enter a mutation', { exact: false }); await waitFor(async () => { const placeholderText = inputField().getAttribute('placeholder'); await expect(placeholderText).toEqual( 'Enter a mutation (e.g. seg1:23T, ins_seg1:10462:A, gene1:57Q, ins_gene1:31:N)', ); }); await waitFor(async () => { await expect(canvas.getByText('seg1:3T')).toBeVisible(); await expect(canvas.getByText('gene2:4')).toBeVisible(); await expect(canvas.getByText('ins_seg2:4:AAA')).toBeVisible(); }); }, }"
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}
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],
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"exports": [
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package/dist/components.d.ts
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declare global {
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interface HTMLElementTagNameMap {
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'gs-
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'gs-wastewater-mutations-over-time': WastewaterMutationsOverTimeComponent;
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}
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}
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declare global {
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namespace JSX {
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interface IntrinsicElements {
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'gs-
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'gs-wastewater-mutations-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
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}
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}
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declare global {
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interface HTMLElementTagNameMap {
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'gs-
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'gs-mutation-comparison-component': MutationComparisonComponent;
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}
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}
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namespace JSX {
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interface IntrinsicElements {
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'gs-mutation-comparison-component': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
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}
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declare global {
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interface HTMLElementTagNameMap {
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'gs-mutations-component': MutationsComponent;
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}
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}
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namespace JSX {
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interface IntrinsicElements {
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'gs-mutations-component': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
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}
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}
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interface HTMLElementTagNameMap {
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}
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}
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'gs-prevalence-over-time': DetailedHTMLProps<HTMLAttributes<HTMLElement>, HTMLElement>;
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}
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}
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