@genome-spy/core 0.67.0 → 0.69.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (290) hide show
  1. package/dist/bundle/index.es.js +15884 -13130
  2. package/dist/bundle/index.js +130 -149
  3. package/dist/schema.json +6498 -6191
  4. package/dist/src/data/collector.d.ts +20 -0
  5. package/dist/src/data/collector.d.ts.map +1 -1
  6. package/dist/src/data/collector.js +148 -0
  7. package/dist/src/data/dataFlow.d.ts +6 -0
  8. package/dist/src/data/dataFlow.d.ts.map +1 -1
  9. package/dist/src/data/dataFlow.js +20 -0
  10. package/dist/src/data/flowInit.d.ts.map +1 -1
  11. package/dist/src/data/flowInit.js +2 -3
  12. package/dist/src/data/flowNode.d.ts +33 -10
  13. package/dist/src/data/flowNode.d.ts.map +1 -1
  14. package/dist/src/data/flowNode.js +84 -13
  15. package/dist/src/data/flowTestUtils.d.ts +2 -2
  16. package/dist/src/data/flowTestUtils.d.ts.map +1 -1
  17. package/dist/src/data/flowTestUtils.js +5 -4
  18. package/dist/src/data/keyIndex.d.ts +18 -0
  19. package/dist/src/data/keyIndex.d.ts.map +1 -0
  20. package/dist/src/data/keyIndex.js +241 -0
  21. package/dist/src/data/keyIndex.test.d.ts +2 -0
  22. package/dist/src/data/keyIndex.test.d.ts.map +1 -0
  23. package/dist/src/data/sources/dataSource.d.ts.map +1 -1
  24. package/dist/src/data/sources/dataSource.js +7 -3
  25. package/dist/src/data/sources/dataSourceFactory.d.ts +14 -12
  26. package/dist/src/data/sources/dataSourceFactory.d.ts.map +1 -1
  27. package/dist/src/data/sources/dataSourceFactory.js +52 -16
  28. package/dist/src/data/sources/lazy/bigBedSource.d.ts.map +1 -1
  29. package/dist/src/data/sources/lazy/bigBedSource.js +11 -10
  30. package/dist/src/data/sources/lazy/bigWigSource.d.ts.map +1 -1
  31. package/dist/src/data/sources/lazy/bigWigSource.js +11 -10
  32. package/dist/src/data/sources/lazy/mockLazySource.d.ts +29 -0
  33. package/dist/src/data/sources/lazy/mockLazySource.d.ts.map +1 -0
  34. package/dist/src/data/sources/lazy/mockLazySource.js +44 -0
  35. package/dist/src/data/sources/lazy/singleAxisLazySource.d.ts +22 -1
  36. package/dist/src/data/sources/lazy/singleAxisLazySource.d.ts.map +1 -1
  37. package/dist/src/data/sources/lazy/singleAxisLazySource.js +34 -2
  38. package/dist/src/data/sources/lazy/singleAxisWindowedSource.d.ts.map +1 -1
  39. package/dist/src/data/sources/lazy/singleAxisWindowedSource.js +16 -1
  40. package/dist/src/data/sources/lazy/tabixSource.d.ts +0 -1
  41. package/dist/src/data/sources/lazy/tabixSource.d.ts.map +1 -1
  42. package/dist/src/data/sources/lazy/tabixSource.js +56 -16
  43. package/dist/src/data/sources/sequenceSource.d.ts.map +1 -1
  44. package/dist/src/data/sources/sequenceSource.js +5 -3
  45. package/dist/src/data/sources/urlSource.d.ts.map +1 -1
  46. package/dist/src/data/sources/urlSource.js +7 -3
  47. package/dist/src/data/transforms/filter.d.ts +4 -4
  48. package/dist/src/data/transforms/filter.d.ts.map +1 -1
  49. package/dist/src/data/transforms/filter.js +13 -7
  50. package/dist/src/data/transforms/filterScoredLabels.d.ts.map +1 -1
  51. package/dist/src/data/transforms/filterScoredLabels.js +11 -6
  52. package/dist/src/data/transforms/filterScoredLabels.test.d.ts +2 -0
  53. package/dist/src/data/transforms/filterScoredLabels.test.d.ts.map +1 -0
  54. package/dist/src/data/transforms/formula.d.ts +4 -4
  55. package/dist/src/data/transforms/formula.d.ts.map +1 -1
  56. package/dist/src/data/transforms/formula.js +12 -6
  57. package/dist/src/data/transforms/measureText.d.ts +2 -2
  58. package/dist/src/data/transforms/measureText.d.ts.map +1 -1
  59. package/dist/src/data/transforms/measureText.js +16 -12
  60. package/dist/src/data/transforms/stack.d.ts.map +1 -1
  61. package/dist/src/data/transforms/stack.js +1 -0
  62. package/dist/src/data/transforms/transform.d.ts +2 -2
  63. package/dist/src/data/transforms/transform.d.ts.map +1 -1
  64. package/dist/src/data/transforms/transform.js +3 -3
  65. package/dist/src/encoder/accessor.d.ts +51 -4
  66. package/dist/src/encoder/accessor.d.ts.map +1 -1
  67. package/dist/src/encoder/accessor.js +174 -10
  68. package/dist/src/encoder/encoder.d.ts +11 -2
  69. package/dist/src/encoder/encoder.d.ts.map +1 -1
  70. package/dist/src/encoder/encoder.js +29 -9
  71. package/dist/src/encoder/metadataChannels.d.ts +15 -0
  72. package/dist/src/encoder/metadataChannels.d.ts.map +1 -0
  73. package/dist/src/encoder/metadataChannels.js +65 -0
  74. package/dist/src/encoder/metadataChannels.test.d.ts +2 -0
  75. package/dist/src/encoder/metadataChannels.test.d.ts.map +1 -0
  76. package/dist/src/genome/genome.d.ts +8 -0
  77. package/dist/src/genome/genome.d.ts.map +1 -1
  78. package/dist/src/genome/genome.js +16 -1
  79. package/dist/src/genome/scaleLocus.d.ts.map +1 -1
  80. package/dist/src/genome/scaleLocus.js +14 -1
  81. package/dist/src/genomeSpy/containerUi.d.ts +0 -1
  82. package/dist/src/genomeSpy/containerUi.d.ts.map +1 -1
  83. package/dist/src/genomeSpy/containerUi.js +0 -14
  84. package/dist/src/genomeSpy/inputBindingManager.js +1 -1
  85. package/dist/src/genomeSpy/interactionController.d.ts.map +1 -1
  86. package/dist/src/genomeSpy/interactionController.js +7 -1
  87. package/dist/src/genomeSpy/loadingIndicatorManager.d.ts +3 -7
  88. package/dist/src/genomeSpy/loadingIndicatorManager.d.ts.map +1 -1
  89. package/dist/src/genomeSpy/loadingIndicatorManager.js +68 -20
  90. package/dist/src/genomeSpy/loadingStatusRegistry.d.ts +52 -0
  91. package/dist/src/genomeSpy/loadingStatusRegistry.d.ts.map +1 -0
  92. package/dist/src/genomeSpy/loadingStatusRegistry.js +86 -0
  93. package/dist/src/genomeSpy/viewContextFactory.d.ts.map +1 -1
  94. package/dist/src/genomeSpy/viewContextFactory.js +0 -1
  95. package/dist/src/genomeSpy/viewDataInit.d.ts.map +1 -1
  96. package/dist/src/genomeSpy/viewDataInit.js +56 -11
  97. package/dist/src/genomeSpy.d.ts +0 -2
  98. package/dist/src/genomeSpy.d.ts.map +1 -1
  99. package/dist/src/genomeSpy.js +47 -27
  100. package/dist/src/gl/glslScaleGenerator.js +1 -1
  101. package/dist/src/marks/mark.d.ts.map +1 -1
  102. package/dist/src/marks/mark.js +40 -41
  103. package/dist/src/marks/markUtils.js +1 -1
  104. package/dist/src/marks/point.d.ts.map +1 -1
  105. package/dist/src/marks/point.js +4 -6
  106. package/dist/src/paramRuntime/expressionCompiler.d.ts +7 -0
  107. package/dist/src/paramRuntime/expressionCompiler.d.ts.map +1 -0
  108. package/dist/src/paramRuntime/expressionCompiler.js +10 -0
  109. package/dist/src/paramRuntime/expressionRef.d.ts +20 -0
  110. package/dist/src/paramRuntime/expressionRef.d.ts.map +1 -0
  111. package/dist/src/paramRuntime/expressionRef.js +95 -0
  112. package/dist/src/paramRuntime/expressionRef.test.d.ts +2 -0
  113. package/dist/src/paramRuntime/expressionRef.test.d.ts.map +1 -0
  114. package/dist/src/paramRuntime/graphRuntime.d.ts +176 -0
  115. package/dist/src/paramRuntime/graphRuntime.d.ts.map +1 -0
  116. package/dist/src/paramRuntime/graphRuntime.js +628 -0
  117. package/dist/src/paramRuntime/graphRuntime.test.d.ts +2 -0
  118. package/dist/src/paramRuntime/graphRuntime.test.d.ts.map +1 -0
  119. package/dist/src/paramRuntime/index.d.ts +9 -0
  120. package/dist/src/paramRuntime/index.d.ts.map +1 -0
  121. package/dist/src/paramRuntime/index.js +8 -0
  122. package/dist/src/paramRuntime/lifecycleRegistry.d.ts +27 -0
  123. package/dist/src/paramRuntime/lifecycleRegistry.d.ts.map +1 -0
  124. package/dist/src/paramRuntime/lifecycleRegistry.js +54 -0
  125. package/dist/src/paramRuntime/paramRuntime.d.ts +165 -0
  126. package/dist/src/paramRuntime/paramRuntime.d.ts.map +1 -0
  127. package/dist/src/paramRuntime/paramRuntime.js +222 -0
  128. package/dist/src/paramRuntime/paramRuntime.test.d.ts +2 -0
  129. package/dist/src/paramRuntime/paramRuntime.test.d.ts.map +1 -0
  130. package/dist/src/paramRuntime/paramStore.d.ts +68 -0
  131. package/dist/src/paramRuntime/paramStore.d.ts.map +1 -0
  132. package/dist/src/paramRuntime/paramStore.js +148 -0
  133. package/dist/src/paramRuntime/paramStore.test.d.ts +2 -0
  134. package/dist/src/paramRuntime/paramStore.test.d.ts.map +1 -0
  135. package/dist/src/paramRuntime/paramUtils.d.ts +86 -0
  136. package/dist/src/paramRuntime/paramUtils.d.ts.map +1 -0
  137. package/dist/src/paramRuntime/paramUtils.js +272 -0
  138. package/dist/src/paramRuntime/selectionStore.d.ts +6 -0
  139. package/dist/src/paramRuntime/selectionStore.d.ts.map +1 -0
  140. package/dist/src/paramRuntime/selectionStore.js +13 -0
  141. package/dist/src/paramRuntime/types.d.ts +16 -0
  142. package/dist/src/paramRuntime/types.d.ts.map +1 -0
  143. package/dist/src/paramRuntime/types.js +25 -0
  144. package/dist/src/paramRuntime/viewParamRuntime.d.ts +164 -0
  145. package/dist/src/paramRuntime/viewParamRuntime.d.ts.map +1 -0
  146. package/dist/src/paramRuntime/viewParamRuntime.js +443 -0
  147. package/dist/src/scale/scale.d.ts +6 -1
  148. package/dist/src/scale/scale.d.ts.map +1 -1
  149. package/dist/src/scale/scale.js +83 -23
  150. package/dist/src/scales/axisResolution.d.ts.map +1 -1
  151. package/dist/src/scales/axisResolution.js +10 -0
  152. package/dist/src/scales/{scaleDomainAggregator.d.ts → domainPlanner.d.ts} +6 -3
  153. package/dist/src/scales/domainPlanner.d.ts.map +1 -0
  154. package/dist/src/scales/{scaleDomainAggregator.js → domainPlanner.js} +128 -10
  155. package/dist/src/scales/domainPlanner.test.d.ts +2 -0
  156. package/dist/src/scales/domainPlanner.test.d.ts.map +1 -0
  157. package/dist/src/scales/scaleInstanceManager.d.ts +6 -3
  158. package/dist/src/scales/scaleInstanceManager.d.ts.map +1 -1
  159. package/dist/src/scales/scaleInstanceManager.js +17 -11
  160. package/dist/src/scales/scaleInteractionController.d.ts +6 -0
  161. package/dist/src/scales/scaleInteractionController.d.ts.map +1 -1
  162. package/dist/src/scales/scaleInteractionController.js +41 -3
  163. package/dist/src/scales/scaleResolution.d.ts +20 -17
  164. package/dist/src/scales/scaleResolution.d.ts.map +1 -1
  165. package/dist/src/scales/scaleResolution.js +188 -71
  166. package/dist/src/scales/scaleResolution.test.d.ts.map +1 -1
  167. package/dist/src/selection/selection.d.ts +21 -0
  168. package/dist/src/selection/selection.d.ts.map +1 -1
  169. package/dist/src/selection/selection.js +83 -1
  170. package/dist/src/spec/channel.d.ts +52 -15
  171. package/dist/src/spec/coreSchemaRoot.d.ts +53 -0
  172. package/dist/src/spec/data.d.ts +4 -0
  173. package/dist/src/spec/parameter.d.ts +16 -11
  174. package/dist/src/spec/root.d.ts +1 -1
  175. package/dist/src/spec/testing.d.ts +12 -0
  176. package/dist/src/spec/testing.d.ts.map +1 -0
  177. package/dist/src/spec/testing.js +20 -0
  178. package/dist/src/spec/view.d.ts +157 -41
  179. package/dist/src/styles/genome-spy.css +3 -31
  180. package/dist/src/styles/genome-spy.css.d.ts +1 -1
  181. package/dist/src/styles/genome-spy.css.d.ts.map +1 -1
  182. package/dist/src/styles/genome-spy.css.js +0 -29
  183. package/dist/src/tooltip/dataTooltipHandler.d.ts +1 -1
  184. package/dist/src/tooltip/dataTooltipHandler.js +23 -32
  185. package/dist/src/tooltip/dataTooltipHandler.test.d.ts +2 -0
  186. package/dist/src/tooltip/dataTooltipHandler.test.d.ts.map +1 -0
  187. package/dist/src/tooltip/flattenDatumRows.d.ts +13 -0
  188. package/dist/src/tooltip/flattenDatumRows.d.ts.map +1 -0
  189. package/dist/src/tooltip/flattenDatumRows.js +47 -0
  190. package/dist/src/tooltip/flattenDatumRows.test.d.ts +2 -0
  191. package/dist/src/tooltip/flattenDatumRows.test.d.ts.map +1 -0
  192. package/dist/src/tooltip/refseqGeneTooltipHandler.d.ts +1 -1
  193. package/dist/src/tooltip/refseqGeneTooltipHandler.js +7 -1
  194. package/dist/src/tooltip/tooltipContext.d.ts +13 -0
  195. package/dist/src/tooltip/tooltipContext.d.ts.map +1 -0
  196. package/dist/src/tooltip/tooltipContext.js +543 -0
  197. package/dist/src/tooltip/tooltipContext.test.d.ts +2 -0
  198. package/dist/src/tooltip/tooltipContext.test.d.ts.map +1 -0
  199. package/dist/src/tooltip/tooltipHandler.d.ts +40 -1
  200. package/dist/src/tooltip/tooltipHandler.d.ts.map +1 -1
  201. package/dist/src/tooltip/tooltipHandler.ts +62 -1
  202. package/dist/src/types/encoder.d.ts +38 -3
  203. package/dist/src/types/rendering.d.ts +4 -3
  204. package/dist/src/types/viewContext.d.ts +0 -14
  205. package/dist/src/utils/inputBinding.d.ts +10 -2
  206. package/dist/src/utils/inputBinding.d.ts.map +1 -1
  207. package/dist/src/utils/inputBinding.js +12 -3
  208. package/dist/src/utils/throttle.d.ts +4 -1
  209. package/dist/src/utils/throttle.d.ts.map +1 -1
  210. package/dist/src/utils/throttle.js +54 -23
  211. package/dist/src/utils/throttle.test.d.ts +2 -0
  212. package/dist/src/utils/throttle.test.d.ts.map +1 -0
  213. package/dist/src/utils/transition.d.ts +21 -0
  214. package/dist/src/utils/transition.d.ts.map +1 -1
  215. package/dist/src/utils/transition.js +28 -0
  216. package/dist/src/utils/ui/tooltip.d.ts.map +1 -1
  217. package/dist/src/utils/ui/tooltip.js +7 -1
  218. package/dist/src/utils/ui/tooltip.test.d.ts +2 -0
  219. package/dist/src/utils/ui/tooltip.test.d.ts.map +1 -0
  220. package/dist/src/view/axisGridView.d.ts.map +1 -1
  221. package/dist/src/view/axisGridView.js +22 -5
  222. package/dist/src/view/axisView.d.ts.map +1 -1
  223. package/dist/src/view/axisView.js +20 -5
  224. package/dist/src/view/concatView.js +3 -3
  225. package/dist/src/view/containerMutationHelper.js +1 -1
  226. package/dist/src/view/containerView.d.ts +9 -5
  227. package/dist/src/view/containerView.d.ts.map +1 -1
  228. package/dist/src/view/containerView.js +34 -9
  229. package/dist/src/view/dataReadiness.d.ts +46 -0
  230. package/dist/src/view/dataReadiness.d.ts.map +1 -0
  231. package/dist/src/view/dataReadiness.js +267 -0
  232. package/dist/src/view/dataReadiness.test.d.ts +2 -0
  233. package/dist/src/view/dataReadiness.test.d.ts.map +1 -0
  234. package/dist/src/view/facetView.d.ts.map +1 -1
  235. package/dist/src/view/facetView.js +7 -5
  236. package/dist/src/view/flowBuilder.d.ts.map +1 -1
  237. package/dist/src/view/flowBuilder.js +17 -4
  238. package/dist/src/view/gridView/gridChild.d.ts.map +1 -1
  239. package/dist/src/view/gridView/gridChild.js +16 -3
  240. package/dist/src/view/gridView/gridView.d.ts.map +1 -1
  241. package/dist/src/view/gridView/gridView.js +119 -2
  242. package/dist/src/view/gridView/scrollbar.d.ts.map +1 -1
  243. package/dist/src/view/gridView/scrollbar.js +3 -0
  244. package/dist/src/view/gridView/selectionRect.d.ts +6 -10
  245. package/dist/src/view/gridView/selectionRect.d.ts.map +1 -1
  246. package/dist/src/view/gridView/selectionRect.js +22 -24
  247. package/dist/src/view/gridView/separatorView.d.ts +51 -0
  248. package/dist/src/view/gridView/separatorView.d.ts.map +1 -0
  249. package/dist/src/view/gridView/separatorView.js +275 -0
  250. package/dist/src/view/layerView.d.ts.map +1 -1
  251. package/dist/src/view/layerView.js +7 -5
  252. package/dist/src/view/layout/flexLayout.d.ts +0 -30
  253. package/dist/src/view/layout/flexLayout.d.ts.map +1 -1
  254. package/dist/src/view/layout/flexLayout.js +0 -86
  255. package/dist/src/view/multiscale.d.ts +35 -0
  256. package/dist/src/view/multiscale.d.ts.map +1 -0
  257. package/dist/src/view/multiscale.js +233 -0
  258. package/dist/src/view/multiscale.test.d.ts +2 -0
  259. package/dist/src/view/multiscale.test.d.ts.map +1 -0
  260. package/dist/src/view/testUtils.d.ts.map +1 -1
  261. package/dist/src/view/testUtils.js +6 -1
  262. package/dist/src/view/unitView.d.ts +8 -13
  263. package/dist/src/view/unitView.d.ts.map +1 -1
  264. package/dist/src/view/unitView.js +120 -45
  265. package/dist/src/view/view.d.ts +27 -18
  266. package/dist/src/view/view.d.ts.map +1 -1
  267. package/dist/src/view/view.js +298 -37
  268. package/dist/src/view/viewFactory.d.ts +0 -12
  269. package/dist/src/view/viewFactory.d.ts.map +1 -1
  270. package/dist/src/view/viewFactory.js +55 -25
  271. package/dist/src/view/viewParamRuntime.test.d.ts +2 -0
  272. package/dist/src/view/viewParamRuntime.test.d.ts.map +1 -0
  273. package/dist/src/view/viewSelectors.d.ts +148 -0
  274. package/dist/src/view/viewSelectors.d.ts.map +1 -0
  275. package/dist/src/view/viewSelectors.js +776 -0
  276. package/dist/src/view/viewSelectors.test.d.ts +2 -0
  277. package/dist/src/view/viewSelectors.test.d.ts.map +1 -0
  278. package/dist/src/view/viewUtils.d.ts +0 -8
  279. package/dist/src/view/viewUtils.d.ts.map +1 -1
  280. package/dist/src/view/viewUtils.js +1 -21
  281. package/package.json +4 -4
  282. package/dist/src/scales/scaleDomainAggregator.d.ts.map +0 -1
  283. package/dist/src/scales/scaleDomainAggregator.test.d.ts +0 -2
  284. package/dist/src/scales/scaleDomainAggregator.test.d.ts.map +0 -1
  285. package/dist/src/spec/sampleView.d.ts +0 -197
  286. package/dist/src/view/paramMediator.d.ts +0 -149
  287. package/dist/src/view/paramMediator.d.ts.map +0 -1
  288. package/dist/src/view/paramMediator.js +0 -478
  289. package/dist/src/view/paramMediator.test.d.ts +0 -2
  290. package/dist/src/view/paramMediator.test.d.ts.map +0 -1

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