@genome-spy/core 0.60.0 → 0.60.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/dist/bundle/index.es.js
CHANGED
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@@ -1382,34 +1382,34 @@ function H1(t) {
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1382
1382
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var C = g === "$" ? n : g === "#" && /[boxX]/.test(E) ? "0" + E.toLowerCase() : "", S = g === "$" ? r : /[%p]/.test(E) ? o : "", P = ef[E], L = /[defgprs%]/.test(E);
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1383
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b = b === void 0 ? 6 : /[gprs]/.test(E) ? Math.max(1, Math.min(21, b)) : Math.max(0, Math.min(20, b));
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1384
1384
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function k(T) {
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1385
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-
var
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1385
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+
var G = C, U = S, j, K, z;
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1386
1386
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if (E === "c")
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1387
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-
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1387
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+
U = P(T) + U, T = "";
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else {
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1389
1389
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T = +T;
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1390
1390
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var ee = T < 0 || 1 / T < 0;
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1391
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-
if (T = isNaN(T) ? c : P(Math.abs(T), b), w && (T = U1(T)), ee && +T == 0 && p !== "+" && (ee = !1),
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1392
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-
for (
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1393
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-
if (z = T.charCodeAt(
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1394
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-
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1391
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if (T = isNaN(T) ? c : P(Math.abs(T), b), w && (T = U1(T)), ee && +T == 0 && p !== "+" && (ee = !1), G = (ee ? p === "(" ? p : a : p === "-" || p === "(" ? "" : p) + G, U = (E === "s" ? rf[8 + l0 / 3] : "") + U + (ee && p === "(" ? ")" : ""), L) {
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1392
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for (j = -1, K = T.length; ++j < K; )
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1393
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if (z = T.charCodeAt(j), 48 > z || z > 57) {
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1394
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U = (z === 46 ? i + T.slice(j + 1) : T.slice(j)) + U, T = T.slice(0, j);
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break;
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}
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}
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}
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x && !m && (T = e(T, 1 / 0));
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1400
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-
var ne =
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1401
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-
switch (x && m && (T = e(
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1400
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var ne = G.length + T.length + U.length, X = ne < y ? new Array(y - ne + 1).join(h) : "";
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1401
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switch (x && m && (T = e(X + T, X.length ? y - U.length : 1 / 0), X = ""), d) {
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1402
1402
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case "<":
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1403
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-
T =
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1403
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+
T = G + T + U + X;
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1404
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break;
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1405
1405
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case "=":
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1406
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-
T =
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1406
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+
T = G + X + T + U;
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1407
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break;
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1408
1408
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case "^":
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1409
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-
T =
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1409
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+
T = X.slice(0, ne = X.length >> 1) + G + T + U + X.slice(ne);
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break;
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1411
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default:
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1412
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-
T =
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1412
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T = X + G + T + U;
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break;
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}
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return s(T);
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@@ -1688,7 +1688,7 @@ function p0(t) {
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var e = t.dateTime, n = t.date, r = t.time, i = t.periods, s = t.days, o = t.shortDays, a = t.months, c = t.shortMonths, u = ci(i), f = ui(i), l = ci(s), h = ui(s), d = ci(o), p = ui(o), g = ci(a), m = ui(a), y = ci(c), x = ui(c), b = {
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a: ee,
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1690
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A: ne,
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1691
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-
b:
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1691
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+
b: X,
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B: zt,
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c: null,
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d: ff,
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@@ -1754,9 +1754,9 @@ function p0(t) {
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}, E = {
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a: k,
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1756
1756
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A: T,
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1757
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-
b:
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1758
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-
B:
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1759
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-
c:
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1757
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+
b: G,
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1758
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+
B: U,
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1759
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c: j,
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d: uf,
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e: uf,
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f: C2,
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@@ -1778,7 +1778,7 @@ function p0(t) {
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V: g2,
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1779
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w: h2,
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1780
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W: m2,
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1781
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-
x:
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1781
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+
x: K,
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X: z,
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y: cf,
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1784
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Y: af,
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@@ -1829,18 +1829,18 @@ function p0(t) {
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1829
1829
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var D = l.exec(H.slice(V));
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1830
1830
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return D ? (F.w = h.get(D[0].toLowerCase()), V + D[0].length) : -1;
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1831
1831
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}
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1832
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-
function
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1832
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+
function G(F, H, V) {
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1833
1833
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var D = y.exec(H.slice(V));
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1834
1834
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return D ? (F.m = x.get(D[0].toLowerCase()), V + D[0].length) : -1;
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1835
1835
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}
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1836
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-
function
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1836
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+
function U(F, H, V) {
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1837
1837
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var D = g.exec(H.slice(V));
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1838
1838
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return D ? (F.m = m.get(D[0].toLowerCase()), V + D[0].length) : -1;
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1839
1839
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}
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1840
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-
function
|
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1840
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+
function j(F, H, V) {
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1841
1841
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return P(F, e, H, V);
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1842
1842
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}
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1843
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-
function
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1843
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+
function K(F, H, V) {
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1844
1844
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return P(F, n, H, V);
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1845
1845
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}
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1846
1846
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function z(F, H, V) {
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@@ -1852,7 +1852,7 @@ function p0(t) {
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1852
1852
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function ne(F) {
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1853
1853
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return s[F.getDay()];
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1854
1854
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}
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1855
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-
function
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1855
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+
function X(F) {
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1856
1856
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return c[F.getMonth()];
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1857
1857
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}
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1858
1858
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function zt(F) {
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@@ -5331,35 +5331,35 @@ function j3(t, e, n) {
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5331
5331
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};
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5332
5332
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return r.metadata = xo(lc(n)), r;
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5333
5333
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}
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5334
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-
function
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5334
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+
function q(t, e, n) {
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5335
5335
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return arguments.length > 1 ? (Oo.set(t, j3(t, e, n)), this) : X3(t) ? Oo.get(t) : void 0;
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5336
5336
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}
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5337
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-
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5338
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-
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5339
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-
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5340
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-
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5341
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-
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5342
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-
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5343
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-
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5344
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-
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5345
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-
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5346
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-
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5347
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-
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5348
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-
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5349
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-
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5350
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-
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5351
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-
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5352
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-
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5353
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-
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5354
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-
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5355
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-
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5356
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-
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5357
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-
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5358
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-
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5359
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-
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5360
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-
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5361
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-
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5362
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-
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5337
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+
q(z3, ep);
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5338
|
+
q(jr, $d, le);
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5339
|
+
q(en, sl, [le, en]);
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5340
|
+
q(Bs, cl, le);
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5341
|
+
q(Ms, b3, le);
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5342
|
+
q(wa, np, le);
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5343
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+
q(fp, E3, [le, mp]);
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5344
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+
q(hp, C3, [le, mp]);
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5345
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+
q(gt, ll, [le, $e]);
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5346
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+
q(`${gt}-${jr}`, ll, [le, $e]);
|
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5347
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+
q(`${gt}-${en}`, op, [le, $e, en]);
|
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5348
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+
q(`${gt}-${Bs}`, fl, [le, $e]);
|
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5349
|
+
q(`${gt}-${Ms}`, S3, [le, $e]);
|
|
5350
|
+
q(`${gt}-${wa}`, ap, [le, $e]);
|
|
5351
|
+
q(`${$r}-${jr}`, cp, [le, $e]);
|
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5352
|
+
q(`${$r}-${en}`, up, [le, $e, en]);
|
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5353
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+
q(`${$r}-${Bs}`, hl, [le, $e]);
|
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5354
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+
q(`${$r}-${Ms}`, D3, [le, $e]);
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5355
|
+
q(`${$r}-${wa}`, lp, [le, $e]);
|
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5356
|
+
q(zc, rp, [Fs, zc]);
|
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5357
|
+
q(dp, ip, Fs);
|
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5358
|
+
q(pp, sp, Fs);
|
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5359
|
+
q(gl, Ap, [Ts, Fs]);
|
|
5360
|
+
q(pl, _u, Ts);
|
|
5361
|
+
q(gp, ml, Ts);
|
|
5362
|
+
q(Nc, G3, Ts);
|
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5363
5363
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function X3(t) {
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5364
5364
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return Oo.has(t);
|
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5365
5365
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}
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@@ -5490,7 +5490,7 @@ vp(J3, (t) => Ea(wp(t)));
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5490
5490
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function yl(t, e) {
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|
5491
5491
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return t = t && t.toLowerCase(), arguments.length > 1 ? ($f[t] = e, this) : $f[t];
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5492
5492
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}
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5493
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-
function
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5493
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+
function J(t, e = t) {
|
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5494
5494
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if (/^[A-Za-z0-9_]+$/.test(t)) {
|
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5495
5495
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const n = function(i) {
|
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5496
5496
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t in i || $3(i, t);
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@@ -5554,7 +5554,7 @@ function hv(t) {
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5554
5554
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return [];
|
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5555
5555
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}
|
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5556
5556
|
}
|
|
5557
|
-
var wt, I, v, Ce,
|
|
5557
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+
var wt, I, v, Ce, Z, Ca = 1, Ps = 2, Zn = 3, gn = 4, Sa = 5, nr = 6, Oe = 7, Rs = 8, dv = 9;
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5558
5558
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wt = {};
|
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5559
5559
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wt[Ca] = "Boolean";
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5560
5560
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wt[Ps] = "<end>";
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@@ -5948,7 +5948,7 @@ function Vv() {
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5948
5948
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}
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5949
5949
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function Qv() {
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5950
5950
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var t, e, n, r;
|
|
5951
|
-
return
|
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5951
|
+
return Z = null, Sp(), t = v, e = Hv(), n = Vv(), r = Gv(e.value, n.value), {
|
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5952
5952
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literal: e.literal + n.literal,
|
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5953
5953
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value: r,
|
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5954
5954
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regex: {
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@@ -5973,12 +5973,12 @@ function Bp() {
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|
|
5973
5973
|
return ks(t) ? Lv() : t === 40 || t === 41 || t === 59 ? nc() : t === 39 || t === 34 ? Uv() : t === 46 ? St(I.charCodeAt(v + 1)) ? eh() : nc() : St(t) ? eh() : nc();
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5974
5974
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}
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5975
5975
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function Le() {
|
|
5976
|
-
const t =
|
|
5977
|
-
return v = t.end,
|
|
5976
|
+
const t = Z;
|
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5977
|
+
return v = t.end, Z = Bp(), v = t.end, t;
|
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5978
5978
|
}
|
|
5979
5979
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function Mp() {
|
|
5980
5980
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const t = v;
|
|
5981
|
-
|
|
5981
|
+
Z = Bp(), v = t;
|
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5982
5982
|
}
|
|
5983
5983
|
function Yv(t) {
|
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5984
5984
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const e = new ct(pv);
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|
@@ -6032,25 +6032,25 @@ function Se(t) {
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|
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6032
6032
|
(e.type !== Oe || e.value !== t) && Ba(e);
|
|
6033
6033
|
}
|
|
6034
6034
|
function te(t) {
|
|
6035
|
-
return
|
|
6035
|
+
return Z.type === Oe && Z.value === t;
|
|
6036
6036
|
}
|
|
6037
6037
|
function rc(t) {
|
|
6038
|
-
return
|
|
6038
|
+
return Z.type === gn && Z.value === t;
|
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6039
6039
|
}
|
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6040
6040
|
function Zv() {
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6041
6041
|
const t = [];
|
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6042
|
-
for (v =
|
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6042
|
+
for (v = Z.start, Se("["); !te("]"); )
|
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6043
6043
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te(",") ? (Le(), t.push(null)) : (t.push(Jn()), te("]") || Se(","));
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6044
6044
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return Le(), Yv(t);
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6045
6045
|
}
|
|
6046
6046
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function ih() {
|
|
6047
|
-
v =
|
|
6047
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+
v = Z.start;
|
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6048
6048
|
const t = Le();
|
|
6049
6049
|
return t.type === Rs || t.type === nr ? (t.octal && W(t, Cp), di(t)) : xl(t.value);
|
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6050
6050
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}
|
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6051
6051
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function Jv() {
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6052
6052
|
var t, e, n, r;
|
|
6053
|
-
if (v =
|
|
6053
|
+
if (v = Z.start, t = Z, t.type === Zn)
|
|
6054
6054
|
return n = ih(), Se(":"), r = Jn(), rh("init", n, r);
|
|
6055
6055
|
if (t.type === Ps || t.type === Oe)
|
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6056
6056
|
Ba(t);
|
|
@@ -6059,7 +6059,7 @@ function Jv() {
|
|
|
6059
6059
|
}
|
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6060
6060
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function _v() {
|
|
6061
6061
|
var t = [], e, n, r, i = {}, s = String;
|
|
6062
|
-
for (v =
|
|
6062
|
+
for (v = Z.start, Se("{"); !te("}"); )
|
|
6063
6063
|
e = Jv(), e.key.type === Ep ? n = e.key.name : n = s(e.key.value), r = "$" + n, Object.prototype.hasOwnProperty.call(i, r) ? W({}, Tv) : i[r] = !0, t.push(e), te("}") || Se(",");
|
|
6064
6064
|
return Se("}"), qv(t);
|
|
6065
6065
|
}
|
|
@@ -6079,10 +6079,10 @@ function tE() {
|
|
|
6079
6079
|
return Zv();
|
|
6080
6080
|
if (te("{"))
|
|
6081
6081
|
return _v();
|
|
6082
|
-
if (t =
|
|
6082
|
+
if (t = Z.type, v = Z.start, t === Zn || eE[Z.value])
|
|
6083
6083
|
n = xl(Le().value);
|
|
6084
6084
|
else if (t === Rs || t === nr)
|
|
6085
|
-
|
|
6085
|
+
Z.octal && W(Z, Cp), n = di(Le());
|
|
6086
6086
|
else {
|
|
6087
6087
|
if (t === gn)
|
|
6088
6088
|
throw new Error(Xi);
|
|
@@ -6098,7 +6098,7 @@ function nE() {
|
|
|
6098
6098
|
return Se(")"), t;
|
|
6099
6099
|
}
|
|
6100
6100
|
function rE() {
|
|
6101
|
-
v =
|
|
6101
|
+
v = Z.start;
|
|
6102
6102
|
const t = Le();
|
|
6103
6103
|
return Wv(t) || Ba(t), xl(t.value);
|
|
6104
6104
|
}
|
|
@@ -6125,13 +6125,13 @@ function oE() {
|
|
|
6125
6125
|
}
|
|
6126
6126
|
function sh() {
|
|
6127
6127
|
const t = oE();
|
|
6128
|
-
if (
|
|
6128
|
+
if (Z.type === Oe && (te("++") || te("--")))
|
|
6129
6129
|
throw new Error(Xi);
|
|
6130
6130
|
return t;
|
|
6131
6131
|
}
|
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6132
6132
|
function uo() {
|
|
6133
6133
|
var t, e;
|
|
6134
|
-
if (
|
|
6134
|
+
if (Z.type !== Oe && Z.type !== gn)
|
|
6135
6135
|
e = sh();
|
|
6136
6136
|
else {
|
|
6137
6137
|
if (te("++") || te("--"))
|
|
@@ -6199,12 +6199,12 @@ function oh(t) {
|
|
|
6199
6199
|
}
|
|
6200
6200
|
function aE() {
|
|
6201
6201
|
var t, e, n, r, i, s, o, a, c, u;
|
|
6202
|
-
if (t =
|
|
6202
|
+
if (t = Z, c = uo(), r = Z, i = oh(r), i === 0)
|
|
6203
6203
|
return c;
|
|
6204
|
-
for (r.prec = i, Le(), e = [t,
|
|
6204
|
+
for (r.prec = i, Le(), e = [t, Z], o = uo(), s = [c, r, o]; (i = oh(Z)) > 0; ) {
|
|
6205
6205
|
for (; s.length > 2 && i <= s[s.length - 2].prec; )
|
|
6206
6206
|
o = s.pop(), a = s.pop().value, c = s.pop(), e.pop(), n = th(a, c, o), s.push(n);
|
|
6207
|
-
r = Le(), r.prec = i, s.push(r), e.push(
|
|
6207
|
+
r = Le(), r.prec = i, s.push(r), e.push(Z), n = uo(), s.push(n);
|
|
6208
6208
|
}
|
|
6209
6209
|
for (u = s.length - 1, n = s[u], e.pop(); u > 1; )
|
|
6210
6210
|
e.pop(), n = th(s[u - 1].value, s[u - 2], n), u -= 2;
|
|
@@ -6221,9 +6221,9 @@ function bl() {
|
|
|
6221
6221
|
return t;
|
|
6222
6222
|
}
|
|
6223
6223
|
function cE(t) {
|
|
6224
|
-
I = t, v = 0, Ce = I.length,
|
|
6224
|
+
I = t, v = 0, Ce = I.length, Z = null, Mp();
|
|
6225
6225
|
const e = bl();
|
|
6226
|
-
if (
|
|
6226
|
+
if (Z.type !== Ps)
|
|
6227
6227
|
throw new Error("Unexpect token after expression.");
|
|
6228
6228
|
return e;
|
|
6229
6229
|
}
|
|
@@ -7106,7 +7106,7 @@ function lh(t, e, n) {
|
|
|
7106
7106
|
}
|
|
7107
7107
|
if (yn(e))
|
|
7108
7108
|
try {
|
|
7109
|
-
return r(
|
|
7109
|
+
return r(J(e.field));
|
|
7110
7110
|
} catch (s) {
|
|
7111
7111
|
throw new Error(`Invalid field definition: ${s.message}`);
|
|
7112
7112
|
}
|
|
@@ -9037,9 +9037,9 @@ class Gs {
|
|
|
9037
9037
|
`// Selection texture
|
|
9038
9038
|
uniform highp usampler2D ${k};`
|
|
9039
9039
|
);
|
|
9040
|
-
const T = this.getContext().glHelper,
|
|
9040
|
+
const T = this.getContext().glHelper, G = T.selectionTextures;
|
|
9041
9041
|
this.selectionTextureOps.push(() => {
|
|
9042
|
-
const
|
|
9042
|
+
const K = S.getValue(C), z = G.get(K);
|
|
9043
9043
|
if (!z)
|
|
9044
9044
|
throw new Error(
|
|
9045
9045
|
`Bug: no selection texture found for "${C}"!`
|
|
@@ -9048,57 +9048,57 @@ uniform highp usampler2D ${k};`
|
|
|
9048
9048
|
[k]: z
|
|
9049
9049
|
});
|
|
9050
9050
|
});
|
|
9051
|
-
const
|
|
9051
|
+
const U = xh + C;
|
|
9052
9052
|
c.push(
|
|
9053
9053
|
`bool ${gi}${C}(bool empty) {
|
|
9054
|
-
return binarySearchTexture(${
|
|
9054
|
+
return binarySearchTexture(${U}, ${L}) || (empty && isEmptyBinarySearchTexture(${U}));
|
|
9055
9055
|
}`
|
|
9056
9056
|
), T.createSelectionTexture(P);
|
|
9057
|
-
const
|
|
9058
|
-
|
|
9059
|
-
const
|
|
9057
|
+
const j = S.createExpression(C);
|
|
9058
|
+
j.addListener(() => {
|
|
9059
|
+
const K = (
|
|
9060
9060
|
/** @type {import("../types/selectionTypes.js").MultiPointSelection} */
|
|
9061
|
-
|
|
9061
|
+
j(null)
|
|
9062
9062
|
);
|
|
9063
|
-
T.createSelectionTexture(
|
|
9063
|
+
T.createSelectionTexture(K), this.getContext().animator.requestRender();
|
|
9064
9064
|
});
|
|
9065
9065
|
}
|
|
9066
9066
|
} else if (Lp(P) && !d.has(C)) {
|
|
9067
9067
|
d.set(C, "interval");
|
|
9068
9068
|
const k = [], T = [];
|
|
9069
|
-
for (const
|
|
9070
|
-
if (!["x", "y"].includes(
|
|
9069
|
+
for (const G of Object.keys(P.intervals)) {
|
|
9070
|
+
if (!["x", "y"].includes(G))
|
|
9071
9071
|
continue;
|
|
9072
|
-
const
|
|
9073
|
-
this.unitView.getScaleResolution(
|
|
9074
|
-
|
|
9072
|
+
const U = io + wi(C) + `_${G}`, { attributeType: j } = qr(
|
|
9073
|
+
this.unitView.getScaleResolution(G).scale,
|
|
9074
|
+
G
|
|
9075
9075
|
);
|
|
9076
9076
|
l.push(" // Selection parameter"), l.push(
|
|
9077
|
-
` uniform highp ${
|
|
9077
|
+
` uniform highp ${j}[2] ${U};`
|
|
9078
9078
|
), A(this, rt).push(() => {
|
|
9079
9079
|
this.registerMarkUniformValue(
|
|
9080
|
-
|
|
9080
|
+
U,
|
|
9081
9081
|
{ expr: C },
|
|
9082
|
-
(
|
|
9082
|
+
(X) => X.intervals[G] ?? [
|
|
9083
9083
|
1 / 0,
|
|
9084
9084
|
-1 / 0
|
|
9085
9085
|
]
|
|
9086
9086
|
);
|
|
9087
9087
|
});
|
|
9088
|
-
const
|
|
9088
|
+
const K = dr + G, z = U + "[0]", ee = U + "[1]", ne = Yp(G);
|
|
9089
9089
|
if (this.encoding[ne]) {
|
|
9090
|
-
const
|
|
9090
|
+
const X = dr + ne, zt = this.defaultHitTestMode;
|
|
9091
9091
|
if (zt == "endpoints")
|
|
9092
9092
|
k.push(
|
|
9093
|
-
`((${z} <= ${
|
|
9093
|
+
`((${z} <= ${K} && ${K} <= ${ee}) || (${z} <= ${X} && ${X} <= ${ee}))`
|
|
9094
9094
|
);
|
|
9095
9095
|
else if (zt == "encloses")
|
|
9096
9096
|
k.push(
|
|
9097
|
-
`(${z} <= ${
|
|
9097
|
+
`(${z} <= ${K} && ${X} <= ${ee})`
|
|
9098
9098
|
);
|
|
9099
9099
|
else if (zt == "intersects")
|
|
9100
9100
|
k.push(
|
|
9101
|
-
`(${z} <= ${
|
|
9101
|
+
`(${z} <= ${X} && ${K} <= ${ee})`
|
|
9102
9102
|
);
|
|
9103
9103
|
else
|
|
9104
9104
|
throw new Kt(
|
|
@@ -9107,7 +9107,7 @@ uniform highp usampler2D ${k};`
|
|
|
9107
9107
|
);
|
|
9108
9108
|
} else
|
|
9109
9109
|
k.push(
|
|
9110
|
-
`(${z} <= ${
|
|
9110
|
+
`(${z} <= ${K} && ${K} <= ${ee})`
|
|
9111
9111
|
);
|
|
9112
9112
|
T.push(`${z} > ${ee}`);
|
|
9113
9113
|
}
|
|
@@ -9122,15 +9122,15 @@ uniform highp usampler2D ${k};`
|
|
|
9122
9122
|
const L = C.channelDef;
|
|
9123
9123
|
if (_e(L))
|
|
9124
9124
|
if (Me(L.value)) {
|
|
9125
|
-
const { uniformName: k, uniformGlsl: T, accessorGlsl:
|
|
9125
|
+
const { uniformName: k, uniformGlsl: T, accessorGlsl: G, adjuster: U } = YE(
|
|
9126
9126
|
E,
|
|
9127
9127
|
S
|
|
9128
9128
|
);
|
|
9129
|
-
c.push(
|
|
9129
|
+
c.push(G), l.push(T), A(this, rt).push(() => {
|
|
9130
9130
|
this.registerMarkUniformValue(
|
|
9131
9131
|
k,
|
|
9132
9132
|
L.value,
|
|
9133
|
-
|
|
9133
|
+
U
|
|
9134
9134
|
);
|
|
9135
9135
|
});
|
|
9136
9136
|
} else
|
|
@@ -9142,34 +9142,34 @@ uniform highp usampler2D ${k};`
|
|
|
9142
9142
|
).accessorGlsl
|
|
9143
9143
|
);
|
|
9144
9144
|
else if (Os(L)) {
|
|
9145
|
-
const { uniformName: k, uniformGlsl: T, accessorGlsl:
|
|
9145
|
+
const { uniformName: k, uniformGlsl: T, accessorGlsl: G } = jE(
|
|
9146
9146
|
E,
|
|
9147
9147
|
P,
|
|
9148
9148
|
S
|
|
9149
9149
|
);
|
|
9150
|
-
l.push(T), c.push(
|
|
9151
|
-
const { largeHp:
|
|
9150
|
+
l.push(T), c.push(G);
|
|
9151
|
+
const { largeHp: U, discrete: j } = qr(
|
|
9152
9152
|
P,
|
|
9153
9153
|
E
|
|
9154
|
-
),
|
|
9154
|
+
), K = j && "domain" in P ? (z) => P.domain().indexOf(z) : U ? eg : (z) => +z;
|
|
9155
9155
|
A(this, rt).push(() => {
|
|
9156
9156
|
this.registerMarkUniformValue(
|
|
9157
9157
|
k,
|
|
9158
9158
|
L.datum,
|
|
9159
|
-
|
|
9159
|
+
K
|
|
9160
9160
|
);
|
|
9161
9161
|
});
|
|
9162
9162
|
} else if (yn(L)) {
|
|
9163
9163
|
const k = f.get([
|
|
9164
9164
|
L.field,
|
|
9165
9165
|
!0
|
|
9166
|
-
]), { attributeGlsl: T, accessorGlsl:
|
|
9166
|
+
]), { attributeGlsl: T, accessorGlsl: G } = hh(
|
|
9167
9167
|
E,
|
|
9168
9168
|
P,
|
|
9169
9169
|
S,
|
|
9170
9170
|
k != null && k.includes(E) ? k : void 0
|
|
9171
9171
|
);
|
|
9172
|
-
u.add(T), c.push(
|
|
9172
|
+
u.add(T), c.push(G);
|
|
9173
9173
|
} else if (Ls(L)) {
|
|
9174
9174
|
const { attributeGlsl: k, accessorGlsl: T } = hh(
|
|
9175
9175
|
E,
|
|
@@ -9193,20 +9193,20 @@ uniform highp usampler2D ${k};`
|
|
|
9193
9193
|
p(E, P[k], k, L);
|
|
9194
9194
|
if (L) {
|
|
9195
9195
|
const k = Ye(S) && S.resolutionChannel || E, T = Zi(k) ? this.unitView.getScaleResolution(k) : null, {
|
|
9196
|
-
glsl:
|
|
9197
|
-
domainUniform:
|
|
9198
|
-
domainUniformName:
|
|
9199
|
-
rangeUniform:
|
|
9196
|
+
glsl: G,
|
|
9197
|
+
domainUniform: U,
|
|
9198
|
+
domainUniformName: j,
|
|
9199
|
+
rangeUniform: K,
|
|
9200
9200
|
rangeUniformName: z
|
|
9201
9201
|
} = XE(E, L, S);
|
|
9202
|
-
c.push(
|
|
9202
|
+
c.push(G), l.push(U), l.push(K), K && A(this, rt).push(() => {
|
|
9203
9203
|
const ee = this.createMarkUniformSetter(z), ne = () => ee(ng(L, E));
|
|
9204
9204
|
T.addEventListener("range", ne), ne();
|
|
9205
|
-
}),
|
|
9206
|
-
const ee = this.createMarkUniformSetter(
|
|
9207
|
-
const
|
|
9205
|
+
}), U && A(this, rt).push(() => {
|
|
9206
|
+
const ee = this.createMarkUniformSetter(j), ne = () => {
|
|
9207
|
+
const X = tn(L.type) ? [0, L.domain().length] : L.domain();
|
|
9208
9208
|
ee(
|
|
9209
|
-
$p(L.type) ? e4(
|
|
9209
|
+
$p(L.type) ? e4(X) : X
|
|
9210
9210
|
);
|
|
9211
9211
|
};
|
|
9212
9212
|
T.addEventListener("domain", ne), ne();
|
|
@@ -11001,7 +11001,7 @@ function pg(t, e, n) {
|
|
|
11001
11001
|
);
|
|
11002
11002
|
}
|
|
11003
11003
|
function sC(t, e) {
|
|
11004
|
-
const n = oC(t), r =
|
|
11004
|
+
const n = oC(t), r = q(n);
|
|
11005
11005
|
if (!r)
|
|
11006
11006
|
throw new Error("Unknown scale type: " + n);
|
|
11007
11007
|
const i = r();
|
|
@@ -11641,9 +11641,9 @@ function TC(t) {
|
|
|
11641
11641
|
function FC(t, e, n) {
|
|
11642
11642
|
return t * Math.pow(e / t, n);
|
|
11643
11643
|
}
|
|
11644
|
-
|
|
11645
|
-
|
|
11646
|
-
|
|
11644
|
+
q("index", Ml, ["continuous"]);
|
|
11645
|
+
q("locus", Y4, ["continuous"]);
|
|
11646
|
+
q("null", Sl, []);
|
|
11647
11647
|
const Sh = "quantitative", vg = "ordinal", Eg = "nominal", Cg = "locus", IC = "index";
|
|
11648
11648
|
var br, ke, ns, rs, O, _c, $c, Ct, eu, Sg, Dg, tu, nu, ho, ru, En, Bg, Mg;
|
|
11649
11649
|
class PC {
|
|
@@ -13369,7 +13369,7 @@ class Og extends vl {
|
|
|
13369
13369
|
* @type {Data}
|
|
13370
13370
|
*/
|
|
13371
13371
|
M(this, Bt, []);
|
|
13372
|
-
M(this, cs,
|
|
13372
|
+
M(this, cs, J(Ze));
|
|
13373
13373
|
/**
|
|
13374
13374
|
* @type {number[]}
|
|
13375
13375
|
*/
|
|
@@ -13413,7 +13413,7 @@ class Og extends vl {
|
|
|
13413
13413
|
if (this.facetBatches.size > 1)
|
|
13414
13414
|
throw new Error("TODO: Support faceted data!");
|
|
13415
13415
|
const a = this.facetBatches.get(void 0), c = this.params.groupby.map(
|
|
13416
|
-
(f) =>
|
|
13416
|
+
(f) => J(f)
|
|
13417
13417
|
), u = c.length > 1 ? (
|
|
13418
13418
|
// There's something strange in d3-array's typings
|
|
13419
13419
|
/** @type {Map<any, any>} */
|
|
@@ -13605,8 +13605,8 @@ class XC extends fe {
|
|
|
13605
13605
|
* @param {import("../../spec/transform.js").CoverageParams} params
|
|
13606
13606
|
*/
|
|
13607
13607
|
constructor(e) {
|
|
13608
|
-
super(e), this.params = e, this.startAccessor =
|
|
13609
|
-
}, this.weightAccessor = e.weight ?
|
|
13608
|
+
super(e), this.params = e, this.startAccessor = J(e.start), this.endAccessor = J(e.end), this.chromAccessor = e.chrom ? J(e.chrom) : (n) => {
|
|
13609
|
+
}, this.weightAccessor = e.weight ? J(e.weight) : (n) => 1, this.as = {
|
|
13610
13610
|
coverage: e.as ?? "coverage",
|
|
13611
13611
|
start: e.asStart ?? e.start,
|
|
13612
13612
|
end: e.asEnd ?? e.end,
|
|
@@ -13745,7 +13745,7 @@ class ZC extends fe {
|
|
|
13745
13745
|
constructor(e, n) {
|
|
13746
13746
|
if (super(e), this.params = e, this._data = [], this.channel = e.channel ?? "x", !["x", "y"].includes(this.channel))
|
|
13747
13747
|
throw new Error("Invalid channel: " + this.channel);
|
|
13748
|
-
this.posAccessor =
|
|
13748
|
+
this.posAccessor = J(this.params.pos), this.posBisector = zr(this.posAccessor), this.scoreAccessor = J(this.params.score), this.widthAccessor = J(this.params.width), this.laneAccessor = this.params.lane ? J(this.params.lane) : (i) => 0, this.padding = this.params.padding ?? 0, this.reservationMaps = /* @__PURE__ */ new Map(), this.resolution = n.getScaleResolution(this.channel);
|
|
13749
13749
|
const r = () => this._filterAndPropagate();
|
|
13750
13750
|
this.schedule = () => n.context.animator.requestTransition(r), this.resolution.addEventListener("domain", (i) => this.schedule()), n._addBroadcastHandler("layoutComputed", () => this.schedule());
|
|
13751
13751
|
}
|
|
@@ -13832,7 +13832,7 @@ class eS extends fe {
|
|
|
13832
13832
|
super(e), this.params = e;
|
|
13833
13833
|
const n = e.index;
|
|
13834
13834
|
if (e.fields) {
|
|
13835
|
-
const r = Ue(e.fields).map((s) =>
|
|
13835
|
+
const r = Ue(e.fields).map((s) => J(s)), i = Ue(e.as || e.fields);
|
|
13836
13836
|
if (r.length !== i.length)
|
|
13837
13837
|
throw new Error(
|
|
13838
13838
|
`Lengths of "fields" (${r.length}), and "as" (${i.length}) do not match!`
|
|
@@ -13877,7 +13877,7 @@ class rS extends fe {
|
|
|
13877
13877
|
*/
|
|
13878
13878
|
constructor(e) {
|
|
13879
13879
|
super(e);
|
|
13880
|
-
const n =
|
|
13880
|
+
const n = J(e.exons ?? "exons"), r = J(e.start ?? "start"), [i, s] = e.as || ["exonStart", "exonEnd"];
|
|
13881
13881
|
this.handle = (o) => {
|
|
13882
13882
|
let a = r(o), c = a, u = !0;
|
|
13883
13883
|
const f = n(o);
|
|
@@ -13903,7 +13903,7 @@ class iS extends fe {
|
|
|
13903
13903
|
*/
|
|
13904
13904
|
constructor(e) {
|
|
13905
13905
|
super(e);
|
|
13906
|
-
const n = Ue(e.field).map((s) =>
|
|
13906
|
+
const n = Ue(e.field).map((s) => J(s)), r = Ue(e.separator), i = Ue(e.as || e.field);
|
|
13907
13907
|
if (n.length !== r.length || n.length !== i.length)
|
|
13908
13908
|
throw new Error(
|
|
13909
13909
|
`Lengths of "separator" (${r.length}), "fields" (${n.length}), and "as" (${i.length}) do not match!`
|
|
@@ -13976,7 +13976,7 @@ class zg extends fe {
|
|
|
13976
13976
|
throw new Error(
|
|
13977
13977
|
"LinearizeGenomicCoordinate transform requires a locus scale!"
|
|
13978
13978
|
);
|
|
13979
|
-
const s =
|
|
13979
|
+
const s = J(e.chrom), o = Ue(e.pos).map((p) => J(p)), a = Ue(e.as);
|
|
13980
13980
|
if (o.length != a.length)
|
|
13981
13981
|
throw new Error(
|
|
13982
13982
|
'The number of "pos" and "as" elements must be equal!'
|
|
@@ -14037,7 +14037,7 @@ class uS extends fe {
|
|
|
14037
14037
|
*/
|
|
14038
14038
|
constructor(e) {
|
|
14039
14039
|
super(e), this.params = e;
|
|
14040
|
-
const n = jc(Ng), r =
|
|
14040
|
+
const n = jc(Ng), r = J(e.field), i = e.as, s = e.fontSize;
|
|
14041
14041
|
this.handle = (o) => {
|
|
14042
14042
|
const a = r(o);
|
|
14043
14043
|
a !== void 0 ? o[i] = n.measureWidth(a, s) : o[i] = 0, this._propagate(o);
|
|
@@ -14060,13 +14060,13 @@ class fS extends fe {
|
|
|
14060
14060
|
super.reset(), this.initialize();
|
|
14061
14061
|
}
|
|
14062
14062
|
initialize() {
|
|
14063
|
-
const e = this.params, n = e.as || "lane", r = Te(e.spacing) ? e.spacing : 1, i =
|
|
14063
|
+
const e = this.params, n = e.as || "lane", r = Te(e.spacing) ? e.spacing : 1, i = J(e.start), s = J(e.end);
|
|
14064
14064
|
if (!e.preference != !e.preferredOrder)
|
|
14065
14065
|
throw new Error(
|
|
14066
14066
|
'Must specify both "preference" and "preferredOrder"'
|
|
14067
14067
|
);
|
|
14068
14068
|
if (e.preference) {
|
|
14069
|
-
const o = new Float64Array(lS), a =
|
|
14069
|
+
const o = new Float64Array(lS), a = J(e.preference), c = e.preferredOrder;
|
|
14070
14070
|
let u = 1 / 0;
|
|
14071
14071
|
this.handle = (f) => {
|
|
14072
14072
|
const l = i(f);
|
|
@@ -14113,7 +14113,7 @@ class hS extends fe {
|
|
|
14113
14113
|
constructor(e) {
|
|
14114
14114
|
if (super(e), this.params = e, e.as && e.as.length != e.fields.length)
|
|
14115
14115
|
throw new Error('"fields" and "as" have unequal lengths!');
|
|
14116
|
-
const n = e.fields.map((i) =>
|
|
14116
|
+
const n = e.fields.map((i) => J(i)), r = e.as ? e.as : n.map(pm);
|
|
14117
14117
|
this.handle = (i) => {
|
|
14118
14118
|
const s = {};
|
|
14119
14119
|
for (let o = 0; o < n.length; o++)
|
|
@@ -14131,7 +14131,7 @@ class dS extends fe {
|
|
|
14131
14131
|
*/
|
|
14132
14132
|
constructor(e) {
|
|
14133
14133
|
super(e), this.params = e;
|
|
14134
|
-
const n = new RegExp(e.regex), r = typeof e.as == "string" ? [e.as] : e.as, i =
|
|
14134
|
+
const n = new RegExp(e.regex), r = typeof e.as == "string" ? [e.as] : e.as, i = J(e.field);
|
|
14135
14135
|
this.handle = (s) => {
|
|
14136
14136
|
const o = i(s);
|
|
14137
14137
|
if ($(o)) {
|
|
@@ -14255,13 +14255,13 @@ class gS extends fe {
|
|
|
14255
14255
|
this.buffer.push(e);
|
|
14256
14256
|
}
|
|
14257
14257
|
complete() {
|
|
14258
|
-
const e = this.params, n = e.as || ["y0", "y1"], r = e.sort ? jh(e.sort.field, e.sort.order) : void 0, i = e.field ?
|
|
14258
|
+
const e = this.params, n = e.as || ["y0", "y1"], r = e.sort ? jh(e.sort.field, e.sort.order) : void 0, i = e.field ? J(e.field) : () => 1, s = e.groupby.map((f) => J(f)), o = B1(
|
|
14259
14259
|
this.buffer,
|
|
14260
14260
|
(f) => s.map((l) => l(f)).join()
|
|
14261
14261
|
).map((f) => f[1]);
|
|
14262
14262
|
let a = (f) => !0;
|
|
14263
14263
|
if (e.baseField) {
|
|
14264
|
-
const f =
|
|
14264
|
+
const f = J(e.baseField);
|
|
14265
14265
|
a = (l) => f(l) !== null;
|
|
14266
14266
|
}
|
|
14267
14267
|
let c, u;
|
|
@@ -14317,7 +14317,7 @@ class mS extends fe {
|
|
|
14317
14317
|
*/
|
|
14318
14318
|
constructor(e) {
|
|
14319
14319
|
super(e), this.params = e;
|
|
14320
|
-
const n =
|
|
14320
|
+
const n = J(e.field ?? "sequence"), [r, i] = e.as ?? ["pos", "sequence"];
|
|
14321
14321
|
this.handle = (s) => {
|
|
14322
14322
|
const o = Object.assign({}, s, {
|
|
14323
14323
|
[i]: "",
|
|
@@ -14361,7 +14361,7 @@ class yS extends fe {
|
|
|
14361
14361
|
'If "as" is defined, "fields" and "as" must have the same length!'
|
|
14362
14362
|
);
|
|
14363
14363
|
e.fields.forEach((n, r) => {
|
|
14364
|
-
const i =
|
|
14364
|
+
const i = J(n), s = Th[e.ops[r]];
|
|
14365
14365
|
this.ops.push((o) => s(o, i)), this.as.push(
|
|
14366
14366
|
e.as ? e.as[r] : `${e.ops[r]}_${e.fields[r]}`
|
|
14367
14367
|
);
|
|
@@ -14382,7 +14382,7 @@ class yS extends fe {
|
|
|
14382
14382
|
complete() {
|
|
14383
14383
|
const e = this.params, n = e == null ? void 0 : e.groupby;
|
|
14384
14384
|
if ((n == null ? void 0 : n.length) > 0) {
|
|
14385
|
-
const r = n.map((s) =>
|
|
14385
|
+
const r = n.map((s) => J(s)), i = (
|
|
14386
14386
|
/** @type {Map<any, any>} */
|
|
14387
14387
|
/** @type {any} */
|
|
14388
14388
|
Zo(this.buffer, ...r)
|
|
@@ -18444,8 +18444,8 @@ Yo = new WeakSet(), nm = function() {
|
|
|
18444
18444
|
return w;
|
|
18445
18445
|
}, y = (b) => {
|
|
18446
18446
|
var P, L, k, T;
|
|
18447
|
-
const { intervals: w } = b, E = (
|
|
18448
|
-
const
|
|
18447
|
+
const { intervals: w } = b, E = (G, U, j) => {
|
|
18448
|
+
const K = (ne, X) => X == null ? null : a[ne].scale(X), z = K("x", G) ?? j, ee = K("y", U) ?? j;
|
|
18449
18449
|
return e.coords.denormalizePoint(z, ee, !0);
|
|
18450
18450
|
}, C = E((P = w.x) == null ? void 0 : P[0], (L = w.y) == null ? void 0 : L[0], 0), S = E((k = w.x) == null ? void 0 : k[1], (T = w.y) == null ? void 0 : T[1], 1);
|
|
18451
18451
|
return mt.create(C.x, C.y, S.x - C.x, S.y - C.y);
|
|
@@ -18464,17 +18464,18 @@ Yo = new WeakSet(), nm = function() {
|
|
|
18464
18464
|
w.uiEvent.shiftKey)
|
|
18465
18465
|
g(), f = !0;
|
|
18466
18466
|
else if (uh(d())) {
|
|
18467
|
-
const
|
|
18467
|
+
const T = (G, U) => {
|
|
18468
18468
|
e.removeInteractionEventListener(
|
|
18469
18469
|
"mouseup",
|
|
18470
|
-
|
|
18470
|
+
T
|
|
18471
18471
|
);
|
|
18472
|
-
const
|
|
18473
|
-
L.subtract(
|
|
18472
|
+
const j = U.point;
|
|
18473
|
+
L.subtract(j).length < 2 && g();
|
|
18474
18474
|
};
|
|
18475
|
-
e.addInteractionEventListener("mouseup",
|
|
18475
|
+
e.addInteractionEventListener("mouseup", T);
|
|
18476
|
+
return;
|
|
18477
|
+
} else
|
|
18476
18478
|
return;
|
|
18477
|
-
}
|
|
18478
18479
|
}
|
|
18479
18480
|
w.stopPropagation();
|
|
18480
18481
|
const E = w.point, C = Ne.fromMouseEvent(
|
|
@@ -18484,27 +18485,27 @@ Yo = new WeakSet(), nm = function() {
|
|
|
18484
18485
|
const k = Ne.fromMouseEvent(L).subtract(C);
|
|
18485
18486
|
let T;
|
|
18486
18487
|
if (l) {
|
|
18487
|
-
const
|
|
18488
|
-
|
|
18489
|
-
|
|
18488
|
+
const G = k.subtract(E), U = l.translate(
|
|
18489
|
+
G.x,
|
|
18490
|
+
G.y
|
|
18490
18491
|
);
|
|
18491
18492
|
T = h(
|
|
18492
|
-
m(new Ne(
|
|
18493
|
-
m(new Ne(
|
|
18493
|
+
m(new Ne(U.x, U.y)),
|
|
18494
|
+
m(new Ne(U.x2, U.y2))
|
|
18494
18495
|
);
|
|
18495
18496
|
} else
|
|
18496
18497
|
T = h(
|
|
18497
18498
|
m(E),
|
|
18498
18499
|
m(k)
|
|
18499
18500
|
);
|
|
18500
|
-
for (const
|
|
18501
|
-
const
|
|
18502
|
-
if (["index", "locus"].includes(
|
|
18503
|
-
const ee = z[1] - z[0], ne =
|
|
18504
|
-
z[0] < ne && (z[0] = ne, z[1] = ne + ee), z[1] >
|
|
18501
|
+
for (const G of o) {
|
|
18502
|
+
const U = a[G], { zoomExtent: j, scale: K } = U, z = T[G];
|
|
18503
|
+
if (["index", "locus"].includes(K.type) && (z[0] = Math.ceil(z[0]), z[1] = Math.ceil(z[1])), l) {
|
|
18504
|
+
const ee = z[1] - z[0], ne = j[0], X = j[1];
|
|
18505
|
+
z[0] < ne && (z[0] = ne, z[1] = ne + ee), z[1] > X && (z[1] = X, z[0] = X - ee);
|
|
18505
18506
|
} else
|
|
18506
|
-
z[0] = Math.max(
|
|
18507
|
-
z[1] = Math.min(
|
|
18507
|
+
z[0] = Math.max(j[0], z[0]), z[1] = Math.min(j[1], z[1]);
|
|
18508
|
+
z[1] = Math.min(j[1], z[1]);
|
|
18508
18509
|
}
|
|
18509
18510
|
p({ type: "interval", intervals: T });
|
|
18510
18511
|
}, P = () => {
|
|
@@ -18758,15 +18759,15 @@ class t5 extends Ws {
|
|
|
18758
18759
|
backgroundStroke: m,
|
|
18759
18760
|
title: y,
|
|
18760
18761
|
selectionRect: x
|
|
18761
|
-
} = l, [b, w] = c.getCellCoords(f), E = o[B(this, Q, Au).call(this, "column", b)], C = a[B(this, Q, Au).call(this, "row", w)], S = h.getViewportSize(), P = h.getSize(), L = h.getOverhang(), k = E.location - L.left, T = C.location - L.top,
|
|
18762
|
+
} = l, [b, w] = c.getCellCoords(f), E = o[B(this, Q, Au).call(this, "column", b)], C = a[B(this, Q, Au).call(this, "row", w)], S = h.getViewportSize(), P = h.getSize(), L = h.getOverhang(), k = E.location - L.left, T = C.location - L.top, G = (me, ut) => (me[ut].grow ? (ut == "width" ? E : C).size : me[ut].px) + L[ut], U = G(S, "width"), j = G(S, "height"), K = G(P, "width"), z = G(P, "height"), ee = l.scrollbars.horizontal, ne = l.scrollbars.vertical, X = ee ? () => u(ee.viewportOffset) : () => 0, zt = ne ? () => u(ne.viewportOffset) : () => 0, Ge = new mt(
|
|
18762
18763
|
() => r.x + k,
|
|
18763
18764
|
() => r.y + T,
|
|
18764
|
-
() =>
|
|
18765
|
-
() =>
|
|
18765
|
+
() => U,
|
|
18766
|
+
() => j
|
|
18766
18767
|
), Ys = h.isScrollable(), Nt = Ys ? new mt(
|
|
18767
|
-
() => r.x + k -
|
|
18768
|
+
() => r.x + k - X(),
|
|
18768
18769
|
() => r.y + T - zt(),
|
|
18769
|
-
() =>
|
|
18770
|
+
() => K,
|
|
18770
18771
|
() => z
|
|
18771
18772
|
) : Ge;
|
|
18772
18773
|
l.coords = Ge;
|
|
@@ -18792,7 +18793,7 @@ class t5 extends Ws {
|
|
|
18792
18793
|
height: z
|
|
18793
18794
|
} : {
|
|
18794
18795
|
x: () => Nt.x,
|
|
18795
|
-
width:
|
|
18796
|
+
width: K
|
|
18796
18797
|
}
|
|
18797
18798
|
) : Ge, V = Gh(
|
|
18798
18799
|
H,
|