@genome-spy/app 1.2.0 → 1.3.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (87) hide show
  1. package/dist/{SharedReadCache-Ey5QIiPM.js → SharedReadCache-9sT2aIxW.js} +6 -12
  2. package/dist/__vite-browser-external-Dgu_Ldik.js +7 -0
  3. package/dist/{agentApi-8hMSlqAQ.js → agentApi-BclFF9zB.js} +7130 -7509
  4. package/dist/agentApi.es.js +4344 -4015
  5. package/dist/agentShared.es.js +431 -458
  6. package/dist/arrayUtils-Bm7QnzhN.js +1306 -0
  7. package/dist/{blosc-JROzDOnd.js → blosc-C-W97QwH.js} +3 -3
  8. package/dist/{canvas2d-Bd8H8MMo.js → canvas2d-8MSf70d4.js} +78 -86
  9. package/dist/{canvas2d-D6VYooRf.js → canvas2d-BwGNI_Rx.js} +83 -91
  10. package/dist/clipOptions-SrrxeAEU.js +4316 -0
  11. package/dist/clipOptions-clBEbkjv.js +4326 -0
  12. package/dist/{layoutResult-D50MSHXR.js → color-jETn8xK_.js} +29 -10
  13. package/dist/color-uTRRsy8i.js +116 -0
  14. package/dist/{componentStyles-DGtQXvwc.js → componentStyles-C7FbjS-a.js} +1 -1
  15. package/dist/{containerView-aEVmYmkA.js → containerView-BItRtKqu.js} +5 -1
  16. package/dist/{containerView-CRJSc4bM.js → containerView-CWa6ZIJW.js} +5 -1
  17. package/dist/{debug-CQ0agCrd.js → debug-23s-jja_.js} +3 -2
  18. package/dist/{debug-DkIMiGdW.js → debug-CWRxvAss.js} +2 -3
  19. package/dist/dialog.es.js +1 -1
  20. package/dist/dist-CmY6iewb.js +1501 -0
  21. package/dist/dist-D6xbz5Ks.js +1501 -0
  22. package/dist/{esm-CjkeZi__.js → esm-BFwBAnbO.js} +25 -25
  23. package/dist/esm-BUkWqSr2.js +299 -0
  24. package/dist/{esm-C-6g-SkZ.js → esm-C0xXMLsR.js} +37 -41
  25. package/dist/{esm-CJeszW-t.js → esm-C2xhhXs0.js} +7 -7
  26. package/dist/esm-C6erfjPM.js +252 -0
  27. package/dist/{esm-DFHFX1sH.js → esm-CVjC7qA4.js} +34 -38
  28. package/dist/esm-CqY5ezGz.js +1249 -0
  29. package/dist/esm-DfMIJ_N2.js +1522 -0
  30. package/dist/esm-Dls41IbZ.js +787 -0
  31. package/dist/{esm-Bv7Frz7C.js → esm-DzQDfrsZ.js} +7 -10
  32. package/dist/esm-aGLCvYRP.js +238 -0
  33. package/dist/{esm-VFJeyk9i.js → esm-nzwgJFGz.js} +40 -36
  34. package/dist/figWigMetadataSourceAdapter-8Kf_vZRf.js +36 -0
  35. package/dist/figWigMetadataSourceAdapter-DdDMZpYO.js +36 -0
  36. package/dist/flowNode-BSjy0Wz3.js +1306 -0
  37. package/dist/flowOutput-D5qpxWe0.js +183 -0
  38. package/dist/index.es.js +4756 -5528
  39. package/dist/index.js +707 -547
  40. package/dist/inflate-BdC5KvHn.js +886 -0
  41. package/dist/{lz4-CUYSbVey.js → lz4-BLPgBOlE.js} +1 -1
  42. package/dist/{markUtils-CvLDz744.js → markUtils-RaatLEa-.js} +9 -6
  43. package/dist/metadataUtils-DxEPe0vj.js +879 -0
  44. package/dist/{order-BVvkjDRT.js → order-BnKzKjt4.js} +383 -347
  45. package/dist/{order-DmMoZsi1.js → order-BpJnq_nV.js} +375 -339
  46. package/dist/{parquetRead-0hFIa3Cc.js → parquetRead-D-yY8njE.js} +3 -11
  47. package/dist/{rasterExport-jeRVq6kY.js → rasterExport-B-WrX1pa.js} +5 -5
  48. package/dist/{rasterExport-DxvowWjH.js → rasterExport-C_vx4Jwd.js} +3 -3
  49. package/dist/{rasterization-DFj3Cvx4.js → rasterization-QktH8Sn2.js} +1 -1
  50. package/dist/{rectangle-Dl4Dy0hS.js → rectangle-BAdoDPXu.js} +34 -31
  51. package/dist/{renderCanvas2D-Bfm1NHFu.js → renderCanvas2D-CsRO78Pq.js} +88 -87
  52. package/dist/{renderCanvas2D-DVjhp834.js → renderCanvas2D-Y7pkRzbC.js} +93 -92
  53. package/dist/{rolldown-runtime-DF993M8W.js → rolldown-runtime-DeIk2rA4.js} +1 -1
  54. package/dist/{indexer-DOYMJ-Md.js → scaleNull-CVzag4z8.js} +2 -12
  55. package/dist/{indexer-DDC0YRGn.js → scaleNull-Pbz7QGnl.js} +2 -12
  56. package/dist/{scalePosition-0aeqp_kz.js → scalePosition-CRXa0rCC.js} +1 -1
  57. package/dist/schema.json +3801 -816
  58. package/dist/{svg-Bm2zxBPu.js → svg-BBMtLgtM.js} +369 -285
  59. package/dist/{svg-CkfuhONt.js → svg-JjWL6U-T.js} +371 -287
  60. package/dist/{svgRasterizer-DoRQEqFA.js → svgRasterizer-6OcftuoI.js} +2 -2
  61. package/dist/{svgRasterizer-raDDhBF-.js → svgRasterizer-DkNRaCPs.js} +4 -4
  62. package/dist/tableMetadataSourceAdapter-CUNwLsdi.js +291 -0
  63. package/dist/tableMetadataSourceAdapter-DQrEXCo6.js +1283 -0
  64. package/dist/url-DeOdSRrv.js +183 -0
  65. package/dist/{viewError-BkJeVYXA.js → viewError-B0TMfOpB.js} +1 -1
  66. package/dist/{viewError-IYqyluc7.js → viewError-D9aO90cI.js} +1 -1
  67. package/dist/{viewSelectors-7LyasQN-.js → viewSelectors-DkFvo33d.js} +832 -734
  68. package/dist/{viewSelectors-CbmkSQRT.js → viewSelectors-lM93fHAq.js} +900 -802
  69. package/dist/{viewUtils-DuddMNNw.js → viewUtils-0SJOewM6.js} +1861 -2459
  70. package/dist/webgl-CXIO3OQz.js +5782 -0
  71. package/dist/webgl-Pdvfhio5.js +5783 -0
  72. package/package.json +7 -5
  73. package/src/agentApi/index.d.ts +3 -2
  74. package/src/agentShared/index.d.ts +2 -0
  75. package/src/appTypes.d.ts +1 -6
  76. package/src/embedTypes.d.ts +36 -1
  77. package/src/index.d.ts +6 -0
  78. package/src/spec/sampleView.d.ts +68 -13
  79. package/src/state/paramProvenanceTypes.d.ts +25 -2
  80. package/src/state.d.ts +14 -52
  81. package/dist/clipOptions-DElJ8dTZ.js +0 -3097
  82. package/dist/clipOptions-D_wBNhzs.js +0 -3087
  83. package/dist/esm-Dndm-NaA.js +0 -1193
  84. package/dist/vega-scale-BoGHANI7.js +0 -2446
  85. package/dist/vega-scale-o9TRyzYH.js +0 -2443
  86. package/dist/webgl-CQfvgnxo.js +0 -5633
  87. package/dist/webgl-DVYkXtiZ.js +0 -5632
@@ -1,5 +1,6 @@
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+ import { Sn as e } from "./clipOptions-SrrxeAEU.js";
1
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  //#region ../core/src/view/renderingContext/viewRenderingContext.js
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- var e = class {
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+ var t = class {
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  constructor(e) {
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  this.globalOptions = e;
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  }
@@ -14,11 +15,11 @@ var e = class {
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  };
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  //#endregion
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  //#region ../core/src/view/layout/layoutResult.js
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- function t(e, t, { devicePixelRatio: n = 1, renderingOptions: i = {} } = {}) {
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- let a = new r(n);
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- return e.arrange(a, t, i), a.complete();
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+ function n(e, t, { devicePixelRatio: n = 1, renderingOptions: r = {} } = {}) {
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+ let a = new i(n);
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+ return e.arrange(a, t, r), a.complete();
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  }
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- var n = class {
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+ var r = class {
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  #e;
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  constructor(e) {
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  this.#e = e;
@@ -43,7 +44,7 @@ var n = class {
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  default: throw Error("Unknown layout command");
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  }
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  }
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- }, r = class extends e {
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+ }, i = class extends t {
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  #e = [];
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  #t = [];
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  #n = 0;
@@ -80,18 +81,36 @@ var n = class {
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  this.#e.push({
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  type: "renderMark",
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  mark: e,
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- options: i(t)
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+ options: a(t)
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  });
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  }
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  complete() {
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  if (this.#t.length > 0) throw Error("Unclosed view scope");
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  if (this.#n > 0) throw Error("Unclosed sample facet batch scope");
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- return new n(this.#e);
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+ return new r(this.#e);
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  }
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  };
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- function i(e) {
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+ function a(e) {
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  let t = { ...e };
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  return e.sampleFacetRenderingOptions && (t.sampleFacetRenderingOptions = { ...e.sampleFacetRenderingOptions }), e.placement && (t.placement = { ...e.placement }), e.clip && (t.clip = { ...e.clip }), t;
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  }
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  //#endregion
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- export { e as n, t };
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+ //#region ../core/src/rendering/color.js
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+ function o(t) {
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+ let n = e(t);
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+ if (!n) throw Error("Invalid color: " + t);
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+ let r = n.rgb(), i = Math.max(0, Math.min(1, r.opacity));
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+ return i === 0 ? [
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+ 0,
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+ 0,
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+ 0,
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+ 0
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+ ] : [
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+ r.r / 255,
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+ r.g / 255,
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+ r.b / 255,
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+ i
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+ ];
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+ }
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+ //#endregion
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+ export { n, t as r, o as t };
@@ -0,0 +1,116 @@
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+ import { xn as e } from "./clipOptions-clBEbkjv.js";
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+ //#region ../core/src/view/renderingContext/viewRenderingContext.js
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+ var t = class {
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+ constructor(e) {
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+ this.globalOptions = e;
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+ }
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+ beginSampleFacetBatch() {}
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+ endSampleFacetBatch() {}
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+ pushView(e, t) {}
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+ popView(e) {}
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+ renderMark(e, t) {}
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+ getDevicePixelRatio() {
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+ return 1;
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+ }
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+ };
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+ //#endregion
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+ //#region ../core/src/view/layout/layoutResult.js
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+ function n(e, t, { devicePixelRatio: n = 1, renderingOptions: r = {} } = {}) {
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+ let a = new i(n);
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+ return e.arrange(a, t, r), a.complete();
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+ }
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+ var r = class {
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+ #e;
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+ constructor(e) {
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+ this.#e = e;
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+ }
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+ collectRenderCommands(e) {
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+ for (let t of this.#e) switch (t.type) {
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+ case "beginSampleFacetBatch":
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+ e.beginSampleFacetBatch();
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+ break;
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+ case "endSampleFacetBatch":
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+ e.endSampleFacetBatch();
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+ break;
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+ case "pushView":
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+ e.pushView(t.view, t.coords);
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+ break;
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+ case "popView":
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+ e.popView(t.view);
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+ break;
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+ case "renderMark":
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+ e.renderMark(t.mark, t.options);
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+ break;
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+ default: throw Error("Unknown layout command");
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+ }
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+ }
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+ }, i = class extends t {
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+ #e = [];
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+ #t = [];
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+ #n = 0;
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+ #r;
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+ constructor(e) {
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+ super({}), this.#r = e;
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+ }
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+ getDevicePixelRatio() {
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+ return this.#r;
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+ }
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+ beginSampleFacetBatch() {
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+ this.#n++, this.#e.push({ type: "beginSampleFacetBatch" });
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+ }
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+ endSampleFacetBatch() {
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+ if (this.#n == 0) throw Error("Unbalanced sample facet batch scope");
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+ this.#n--, this.#e.push({ type: "endSampleFacetBatch" });
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+ }
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+ pushView(e, t) {
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+ this.#t.push(e), this.#e.push({
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+ type: "pushView",
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+ view: e,
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+ coords: t
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+ });
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+ }
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+ popView(e) {
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+ if (this.#t.pop() !== e) throw Error("Unbalanced view scope");
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+ this.#e.push({
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+ type: "popView",
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+ view: e
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+ });
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+ }
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+ renderMark(e, t) {
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+ if (this.#t.length == 0) throw Error("A mark must be inside a view scope");
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+ this.#e.push({
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+ type: "renderMark",
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+ mark: e,
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+ options: a(t)
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+ });
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+ }
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+ complete() {
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+ if (this.#t.length > 0) throw Error("Unclosed view scope");
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+ if (this.#n > 0) throw Error("Unclosed sample facet batch scope");
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+ return new r(this.#e);
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+ }
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+ };
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+ function a(e) {
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+ let t = { ...e };
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+ return e.sampleFacetRenderingOptions && (t.sampleFacetRenderingOptions = { ...e.sampleFacetRenderingOptions }), e.placement && (t.placement = { ...e.placement }), e.clip && (t.clip = { ...e.clip }), t;
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+ }
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+ //#endregion
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+ //#region ../core/src/rendering/color.js
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+ function o(t) {
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+ let n = e(t);
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+ if (!n) throw Error("Invalid color: " + t);
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+ let r = n.rgb(), i = Math.max(0, Math.min(1, r.opacity));
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+ return i === 0 ? [
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+ 0,
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+ 0,
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+ 0,
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+ 0
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+ ] : [
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+ r.r / 255,
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+ r.g / 255,
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+ r.b / 255,
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+ i
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+ ];
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+ }
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+ //#endregion
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+ export { n, t as r, o as t };
@@ -1272,7 +1272,7 @@ function In(e) {
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  }
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  function Ln(e) {
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  let t = e.getAttribute("data-prefix"), n = e.getAttribute("data-icon"), r = e.innerText === void 0 ? "" : e.innerText.trim(), i = U(at(e));
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- return i.prefix ||= V(), t && n && (i.prefix = t, i.iconName = n), i.iconName && i.prefix ? i : (i.prefix && r.length > 0 && (i.iconName = Bt(i.prefix, e.innerText) || zt(i.prefix, Ct(e.innerText))), !i.iconName && O.autoFetchSvg && e.firstChild && e.firstChild.nodeType === Node.TEXT_NODE && (i.iconName = e.firstChild.data), i);
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+ return i.prefix ||= V(), t && n && (i.prefix = t, i.iconName = n), i.iconName && i.prefix || (i.prefix && r.length > 0 && (i.iconName = Bt(i.prefix, e.innerText) || zt(i.prefix, Ct(e.innerText))), !i.iconName && O.autoFetchSvg && e.firstChild && e.firstChild.nodeType === Node.TEXT_NODE && (i.iconName = e.firstChild.data)), i;
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  }
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  function Rn(e) {
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  let t = N(e.attributes).reduce((e, t) => (e.name !== "class" && e.name !== "style" && (e[t.name] = t.value), e), {}), n = e.getAttribute("title"), r = e.getAttribute("data-fa-title-id");
@@ -1,4 +1,4 @@
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- import { _ as e, v as t } from "./viewSelectors-CbmkSQRT.js";
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+ import { _ as e, v as t } from "./viewSelectors-DkFvo33d.js";
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  //#region ../core/src/view/viewIdentityRegistry.js
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  var n = /* @__PURE__ */ new WeakMap();
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  function r(e) {
@@ -19,6 +19,10 @@ var i = class {
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  }, a = class n extends t {
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  #e = /* @__PURE__ */ new Map();
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  async initializeChildren() {}
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+ async createChildViews(e, t) {
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+ let n = await Promise.allSettled(e), r = n.filter((e) => e.status === "fulfilled").map((e) => e.value), i = n.find((e) => e.status === "rejected");
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+ if (t(r), i) throw i.reason;
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+ }
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  async syncGuideViews(e) {}
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  getNextAutoName(e) {
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  let t = this.#e.get(e) ?? 0;
@@ -1,4 +1,4 @@
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- import { v as e, y as t } from "./viewSelectors-7LyasQN-.js";
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+ import { v as e, y as t } from "./viewSelectors-lM93fHAq.js";
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  //#region ../core/src/encoder/metadataChannels.js
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  function n(e) {
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@@ -40,6 +40,10 @@ var s = class {
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  }, c = class n extends t {
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  #e = /* @__PURE__ */ new Map();
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  async initializeChildren() {}
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+ async createChildViews(e, t) {
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+ let n = await Promise.allSettled(e), r = n.filter((e) => e.status === "fulfilled").map((e) => e.value), i = n.find((e) => e.status === "rejected");
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+ if (t(r), i) throw i.reason;
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+ }
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  async syncGuideViews(e) {}
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  getNextAutoName(e) {
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  let t = this.#e.get(e) ?? 0;
@@ -1,5 +1,6 @@
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- import { a as e, x as t } from "./viewSelectors-7LyasQN-.js";
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- import { i as n, n as r, t as i } from "./containerView-CRJSc4bM.js";
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+ import { i as e, x as t } from "./viewSelectors-DkFvo33d.js";
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+ import { n } from "./metadataChannels-DLSmx7kU.js";
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+ import { n as r, t as i } from "./containerView-BItRtKqu.js";
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  //#region ../core/src/debug/valuePreview.js
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  var a = 3, o = 12, s = 8, c = 160;
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  function l(e, t = 0) {
@@ -1,6 +1,5 @@
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- import { b as e, i as t } from "./viewSelectors-CbmkSQRT.js";
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- import { n } from "./metadataChannels-DLSmx7kU.js";
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- import { n as r, t as i } from "./containerView-aEVmYmkA.js";
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+ import { S as e, a as t } from "./viewSelectors-lM93fHAq.js";
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+ import { i as n, n as r, t as i } from "./containerView-CWa6ZIJW.js";
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  //#region ../core/src/debug/valuePreview.js
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  var a = 3, o = 12, s = 8, c = 160;
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package/dist/dialog.es.js CHANGED
@@ -1,5 +1,5 @@
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  import { a as e, n as t, o as n, t as r } from "./lit-CoXp9NFX.js";
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- import { n as i, r as a, t as o } from "./componentStyles-DGtQXvwc.js";
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+ import { n as i, r as a, t as o } from "./componentStyles-C7FbjS-a.js";
3
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  //#region src/components/generic/baseDialog.js
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