@gen-epix/ui-casedb 2.0.1 → 2.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/index.d.ts +2 -2412
- package/dist/index.js +15603 -15632
- package/dist/index.js.map +1 -1
- package/dist/src/classes/errors/UploadError.d.ts +5 -0
- package/dist/src/classes/errors/index.d.ts +1 -0
- package/dist/src/classes/filters/SelectionFilter.d.ts +10 -0
- package/dist/src/classes/filters/TreeFilter.d.ts +10 -0
- package/dist/src/classes/managers/EpiDataManager/EpiDataManager.d.ts +14 -0
- package/dist/src/classes/managers/EpiDataManager/index.d.ts +1 -0
- package/dist/src/classes/managers/EpiEventBusManager/EpiEventBusManager.d.ts +48 -0
- package/dist/src/classes/managers/EpiEventBusManager/index.d.ts +1 -0
- package/dist/src/classes/managers/EpiHighlightingManager/EpiHighlightingManager.d.ts +9 -0
- package/dist/src/classes/managers/EpiHighlightingManager/index.d.ts +1 -0
- package/dist/src/classes/managers/EpiLineListCaseSetMembersManager/EpiListsCaseSetMembersManager.d.ts +11 -0
- package/dist/src/classes/managers/EpiLineListCaseSetMembersManager/index.d.ts +1 -0
- package/dist/src/components/epi/EpiAddCasesToEventDialog/EpiAddCasesToEventDialog.d.ts +11 -0
- package/dist/src/components/epi/EpiAddCasesToEventDialog/EpiAddCasesToEventDialogSuccessNotificationMessage.d.ts +6 -0
- package/dist/src/components/epi/EpiAddCasesToEventDialog/index.d.ts +1 -0
- package/dist/src/components/epi/EpiBulkEditCaseDialog/EpiBulkEditCaseDialog.d.ts +10 -0
- package/dist/src/components/epi/EpiBulkEditCaseDialog/index.d.ts +1 -0
- package/dist/src/components/epi/EpiCaseInfoDialog/EpiCaseCaseSetInfo.d.ts +6 -0
- package/dist/src/components/epi/EpiCaseInfoDialog/EpiCaseContent.d.ts +6 -0
- package/dist/src/components/epi/EpiCaseInfoDialog/EpiCaseForm.d.ts +9 -0
- package/dist/src/components/epi/EpiCaseInfoDialog/EpiCaseInfoDialog.d.ts +10 -0
- package/dist/src/components/epi/EpiCaseInfoDialog/EpiCaseSharingForm.d.ts +9 -0
- package/dist/src/components/epi/EpiCaseInfoDialog/EpiCaseSharingInfo.d.ts +3 -0
- package/dist/src/components/epi/EpiCaseInfoDialog/EpiReadOnlyCaseContent.d.ts +6 -0
- package/dist/src/components/epi/EpiCaseInfoDialog/index.d.ts +1 -0
- package/dist/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetContent.d.ts +6 -0
- package/dist/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetDescription.d.ts +6 -0
- package/dist/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetForm.d.ts +8 -0
- package/dist/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetInfoDialog.d.ts +11 -0
- package/dist/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetSharingForm.d.ts +10 -0
- package/dist/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetSharingInfo.d.ts +3 -0
- package/dist/src/components/epi/EpiCaseSetInfoDialog/index.d.ts +1 -0
- package/dist/src/components/epi/EpiCaseSummary/EpiCaseSummary.d.ts +5 -0
- package/dist/src/components/epi/EpiCaseSummary/index.d.ts +1 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoAccessRights.d.ts +5 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoColAccessRights.d.ts +4 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoData.d.ts +5 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialog.d.ts +8 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialogContent.d.ts +3 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialogWithLoader.d.ts +9 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoRegions.d.ts +5 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoTrees.d.ts +5 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoValues.d.ts +5 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoVariableDetails.d.ts +6 -0
- package/dist/src/components/epi/EpiCaseTypeInfoDialog/index.d.ts +10 -0
- package/dist/src/components/epi/EpiCasesAlreadyInCaseSetWarning/EpiCasesAlreadyInCaseSetWarning.d.ts +5 -0
- package/dist/src/components/epi/EpiCasesAlreadyInCaseSetWarning/EpiCasesAlreadyInCaseSetWarningCaseSetLink.d.ts +5 -0
- package/dist/src/components/epi/EpiCasesAlreadyInCaseSetWarning/index.d.ts +1 -0
- package/dist/src/components/epi/EpiCompletCaseTypeLoader/EpiCompletCaseTypeLoader.d.ts +7 -0
- package/dist/src/components/epi/EpiCompletCaseTypeLoader/index.d.ts +1 -0
- package/dist/src/components/epi/EpiContextMenu/EpiContextMenu.d.ts +20 -0
- package/dist/src/components/epi/EpiContextMenu/index.d.ts +1 -0
- package/dist/src/components/epi/EpiCreateEventDialog/EpiCreateEventDialog.d.ts +11 -0
- package/dist/src/components/epi/EpiCreateEventDialog/EpiCreateEventDialogSuccessNotificationMessage.d.ts +6 -0
- package/dist/src/components/epi/EpiCreateEventDialog/index.d.ts +1 -0
- package/dist/src/components/epi/EpiCurveWidget/EpiCurveWidget.d.ts +1 -0
- package/dist/src/components/epi/EpiCurveWidget/index.d.ts +1 -0
- package/dist/src/components/epi/EpiCustomTabPanel/EpiCustomTabPanel.d.ts +6 -0
- package/dist/src/components/epi/EpiCustomTabPanel/index.d.ts +1 -0
- package/dist/src/components/epi/EpiDashboard/EpiDashboard.d.ts +8 -0
- package/dist/src/components/epi/EpiDashboard/EpiDashboardDownloadSidebarItem.d.ts +8 -0
- package/dist/src/components/epi/EpiDashboard/EpiDashboardGeneralSettingsForm.d.ts +4 -0
- package/dist/src/components/epi/EpiDashboard/EpiDashboardLayoutRenderer.d.ts +13 -0
- package/dist/src/components/epi/EpiDashboard/EpiDashboardLayoutSettingsForm.d.ts +4 -0
- package/dist/src/components/epi/EpiDashboard/EpiDashboardSettingsSidebarItem.d.ts +10 -0
- package/dist/src/components/epi/EpiDashboard/EpiDashboardTreeSettingsForm.d.ts +4 -0
- package/dist/src/components/epi/EpiDashboard/index.d.ts +1 -0
- package/dist/src/components/epi/EpiDashboardStoreLoader/EpiDashboardStoreLoader.d.ts +7 -0
- package/dist/src/components/epi/EpiDashboardStoreLoader/EpiDashboardStoreLoaderContent.d.ts +8 -0
- package/dist/src/components/epi/EpiDashboardStoreLoader/index.d.ts +2 -0
- package/dist/src/components/epi/EpiDashboardStoreLoader/withEpiDashboardStore.d.ts +4 -0
- package/dist/src/components/epi/EpiDataCollectionAccessInfo/EpiDataCollectionAccessInfo.d.ts +1 -0
- package/dist/src/components/epi/EpiDataCollectionAccessInfo/index.d.ts +1 -0
- package/dist/src/components/epi/EpiFindSimilarCasesDialog/EpiFindSimilarCasesDialog.d.ts +12 -0
- package/dist/src/components/epi/EpiFindSimilarCasesDialog/index.d.ts +1 -0
- package/dist/src/components/epi/EpiLegendaItem/EpiLegendaItem.d.ts +10 -0
- package/dist/src/components/epi/EpiLegendaItem/index.d.ts +1 -0
- package/dist/src/components/epi/EpiLineListWidget/EpiLineListWidget.d.ts +10 -0
- package/dist/src/components/epi/EpiLineListWidget/EpiLineListWidgetPrimaryMenu.d.ts +5 -0
- package/dist/src/components/epi/EpiLineListWidget/EpiLineListWidgetSecondaryMenu.d.ts +4 -0
- package/dist/src/components/epi/EpiLineListWidget/EpiLineListWidgetTitle.d.ts +1 -0
- package/dist/src/components/epi/EpiLineListWidget/index.d.ts +1 -0
- package/dist/src/components/epi/EpiLineListWidget/useEpiLineListWidgetEmitDownloadOptions.d.ts +1 -0
- package/dist/src/components/epi/EpiMapWidget/EpiMapWidget.d.ts +1 -0
- package/dist/src/components/epi/EpiMapWidget/index.d.ts +1 -0
- package/dist/src/components/epi/EpiRemoveCasesFromEventDialog/EpiRemoveCasesFromEventDialog.d.ts +11 -0
- package/dist/src/components/epi/EpiRemoveCasesFromEventDialog/index.d.ts +1 -0
- package/dist/src/components/epi/EpiRemoveFindSimilarCasesResultDialog/EpiRemoveFindSimilarCasesResultDialog.d.ts +10 -0
- package/dist/src/components/epi/EpiSequenceDownloadDialog/EpiSequenceDownloadDialog.d.ts +11 -0
- package/dist/src/components/epi/EpiSequenceDownloadDialog/index.d.ts +1 -0
- package/dist/src/components/epi/EpiStratification/EpiStratification.d.ts +1 -0
- package/dist/src/components/epi/EpiStratification/index.d.ts +1 -0
- package/dist/src/components/epi/EpiTreeDescription/EpiTreeDescription.d.ts +5 -0
- package/dist/src/components/epi/EpiTreeDescription/index.d.ts +1 -0
- package/dist/src/components/epi/EpiTreeWidget/EpiTreeWidget.d.ts +14 -0
- package/dist/src/components/epi/EpiTreeWidget/index.d.ts +1 -0
- package/dist/src/components/epi/EpiUpload/EpiUpload.d.ts +1 -0
- package/dist/src/components/epi/EpiUpload/EpiUploadCaseResultTable.d.ts +13 -0
- package/dist/src/components/epi/EpiUpload/EpiUploadCreateCases.d.ts +1 -0
- package/dist/src/components/epi/EpiUpload/EpiUploadMapColumns.d.ts +1 -0
- package/dist/src/components/epi/EpiUpload/EpiUploadMapSequences.d.ts +1 -0
- package/dist/src/components/epi/EpiUpload/EpiUploadNavigation.d.ts +10 -0
- package/dist/src/components/epi/EpiUpload/EpiUploadSelectFile.d.ts +2 -0
- package/dist/src/components/epi/EpiUpload/EpiUploadSelectSequenceFiles.d.ts +1 -0
- package/dist/src/components/epi/EpiUpload/EpiUploadValidate.d.ts +2 -0
- package/dist/src/components/epi/EpiUpload/EpiUploadValidateNavigation.d.ts +5 -0
- package/dist/src/components/epi/EpiUpload/index.d.ts +1 -0
- package/dist/src/components/epi/EpiUserRightsDialog/EpiUserRightsDialog.d.ts +10 -0
- package/dist/src/components/epi/EpiUserRightsDialog/EpiUserRightsDialogCaseAccessPolicy.d.ts +5 -0
- package/dist/src/components/epi/EpiUserRightsDialog/index.d.ts +1 -0
- package/dist/src/components/epi/EpiWarning/EpiWarning.d.ts +4 -0
- package/dist/src/components/epi/EpiWarning/index.d.ts +1 -0
- package/dist/src/components/epi/EpiWidget/EpiWidget.d.ts +13 -0
- package/dist/src/components/epi/EpiWidget/index.d.ts +1 -0
- package/dist/src/components/epi/EpiWidgetHeaderIconButton/EpiWidgetHeaderIconButton.d.ts +5 -0
- package/dist/src/components/epi/EpiWidgetHeaderIconButton/index.d.ts +1 -0
- package/dist/src/components/epi/EpiWidgetMenu/EpiWidgetMenu.d.ts +6 -0
- package/dist/src/components/epi/EpiWidgetMenu/index.d.ts +1 -0
- package/dist/src/components/epi/EpiWidgetUnavailable/EpiWidgetUnavailable.d.ts +6 -0
- package/dist/src/components/epi/EpiWidgetUnavailable/index.d.ts +1 -0
- package/dist/src/components/ui/FileSelector/FileSelector.d.ts +7 -0
- package/dist/src/components/ui/FileSelector/index.d.ts +1 -0
- package/dist/src/components/ui/HomePageTrends/HomePageTrendCard.d.ts +9 -0
- package/dist/src/components/ui/HomePageTrends/HomePageTrends.d.ts +4 -0
- package/dist/src/components/ui/HomePageTrends/index.d.ts +1 -0
- package/dist/src/components/ui/PhylogeneticTreeComponent/PhylogeneticTreeComponent.d.ts +41 -0
- package/dist/src/components/ui/PhylogeneticTreeComponent/index.d.ts +1 -0
- package/dist/src/components/ui/UsersEffectiveRightsDetailsDialog/UsersEffectiveRightsDetailsDialog.d.ts +14 -0
- package/dist/src/components/ui/UsersEffectiveRightsDetailsDialog/index.d.ts +1 -0
- package/dist/src/context/caseAbac/CaseAbacContext.d.ts +15 -0
- package/dist/src/context/caseAbac/CaseAbacContextProvider.d.ts +6 -0
- package/dist/src/context/caseAbac/index.d.ts +3 -0
- package/dist/src/context/caseAbac/useCaseAbacContext.d.ts +2 -0
- package/dist/src/context/caseTypeAbac/CaseTypeAbacContext.d.ts +15 -0
- package/dist/src/context/caseTypeAbac/CaseTypeAbacContextProvider.d.ts +6 -0
- package/dist/src/context/caseTypeAbac/index.d.ts +3 -0
- package/dist/src/context/caseTypeAbac/useCaseTypeAbacContext.d.ts +2 -0
- package/dist/src/data/query.d.ts +61 -0
- package/dist/src/dataHooks/useAssemblyProtocolsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useAssemblyProtocolsQuery/useAssemblyProtocolsQuery.d.ts +6 -0
- package/dist/src/dataHooks/useCaseRightsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseRightsQuery/useCaseRightsQuery.d.ts +3 -0
- package/dist/src/dataHooks/useCaseSetCategoriesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseSetCategoriesQuery/useCaseSetCategoriesQuery.d.ts +6 -0
- package/dist/src/dataHooks/useCaseSetRightsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseSetRightsQuery/useCaseSetRightsQuery.d.ts +3 -0
- package/dist/src/dataHooks/useCaseSetStatsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseSetStatsQuery/useCaseSetStatsQuery.d.ts +5 -0
- package/dist/src/dataHooks/useCaseSetStatusesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseSetStatusesQuery/useCaseSetStatusesQuery.d.ts +6 -0
- package/dist/src/dataHooks/useCaseSetsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseSetsQuery/useCaseSetsQuery.d.ts +6 -0
- package/dist/src/dataHooks/useCaseTypeSetCategoriesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseTypeSetCategoriesQuery/useCaseTypeSetCategoriesQuery.d.ts +6 -0
- package/dist/src/dataHooks/useCaseTypeSetCategoryPurposeQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseTypeSetCategoryPurposeQuery/useCaseTypeSetCategoryPurposeQuery.d.ts +4 -0
- package/dist/src/dataHooks/useCaseTypeSetMembersQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseTypeSetMembersQuery/useCaseTypeSetMembersQuery.d.ts +3 -0
- package/dist/src/dataHooks/useCaseTypeSetsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseTypeSetsQuery/useCaseTypeSetsQuery.d.ts +7 -0
- package/dist/src/dataHooks/useCaseTypeStatsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseTypeStatsQuery/useCaseTypeStatsQuery.d.ts +3 -0
- package/dist/src/dataHooks/useCaseTypesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useCaseTypesQuery/useCaseTypesQuery.d.ts +9 -0
- package/dist/src/dataHooks/useColSetMembersQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useColSetMembersQuery/useColSetMembersQuery.d.ts +3 -0
- package/dist/src/dataHooks/useColSetsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useColSetsQuery/useColSetsQuery.d.ts +6 -0
- package/dist/src/dataHooks/useColTypesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useColTypesQuery/useColTypesQuery.d.ts +4 -0
- package/dist/src/dataHooks/useColsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useColsQuery/useColsQuery.d.ts +7 -0
- package/dist/src/dataHooks/useConceptQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useConceptQuery/useConceptQuery.d.ts +7 -0
- package/dist/src/dataHooks/useConceptRelationTypeQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useConceptRelationTypeQuery/useConceptRelationTypeQuery.d.ts +4 -0
- package/dist/src/dataHooks/useConceptSetTypeQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useConceptSetTypeQuery/useConceptSetTypeQuery.d.ts +4 -0
- package/dist/src/dataHooks/useConceptSetsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useConceptSetsQuery/useConceptSetsQuery.d.ts +6 -0
- package/dist/src/dataHooks/useDataCollectionSetMembersQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useDataCollectionSetMembersQuery/useDataCollectionSetMembersQuery.d.ts +3 -0
- package/dist/src/dataHooks/useDataCollectionsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useDataCollectionsQuery/useDataCollectionsQuery.d.ts +6 -0
- package/dist/src/dataHooks/useDimTypesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useDimTypesQuery/useDimTypesQuery.d.ts +4 -0
- package/dist/src/dataHooks/useDimsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useDimsQuery/useDimsQuery.d.ts +7 -0
- package/dist/src/dataHooks/useDiseasesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useDiseasesQuery/useDiseasesQuery.d.ts +6 -0
- package/dist/src/dataHooks/useEtiologicalAgentsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useEtiologicalAgentsQuery/useEtiologicalAgentsQuery.d.ts +6 -0
- package/dist/src/dataHooks/useGeneticDistanceProtocolsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useGeneticDistanceProtocolsQuery/useGeneticDistanceProtocolsQuery.d.ts +5 -0
- package/dist/src/dataHooks/useOrganizationAccessCasePoliciesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useOrganizationAccessCasePoliciesQuery/useOrganizationAccessCasePoliciesQuery.d.ts +3 -0
- package/dist/src/dataHooks/useOrganizationShareCasePoliciesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useOrganizationShareCasePoliciesQuery/useOrganizationShareCasePoliciesQuery.d.ts +3 -0
- package/dist/src/dataHooks/useRefColsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useRefColsQuery/useRefColsQuery.d.ts +6 -0
- package/dist/src/dataHooks/useRefColsValidationRulesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useRefColsValidationRulesQuery/useRefColsValidationRulesQuery.d.ts +3 -0
- package/dist/src/dataHooks/useRefDimsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useRefDimsQuery/useRefDimsQuery.d.ts +6 -0
- package/dist/src/dataHooks/useRegionQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useRegionQuery/useRegionQuery.d.ts +7 -0
- package/dist/src/dataHooks/useRegionRelationTypeQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useRegionRelationTypeQuery/useRegionRelationTypeQuery.d.ts +4 -0
- package/dist/src/dataHooks/useRegionSetsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useRegionSetsQuery/useRegionSetsQuery.d.ts +6 -0
- package/dist/src/dataHooks/useSequencingProtocolsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useSequencingProtocolsQuery/useSequencingProtocolsQuery.d.ts +6 -0
- package/dist/src/dataHooks/useTreeAlgorithmCodesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useTreeAlgorithmCodesQuery/useTreeAlgorithmCodesQuery.d.ts +4 -0
- package/dist/src/dataHooks/useUserAccessCasePoliciesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useUserAccessCasePoliciesQuery/useUserAccessCasePoliciesQuery.d.ts +3 -0
- package/dist/src/dataHooks/useUserEffectiveRightsQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useUserEffectiveRightsQuery/useUserEffectiveRightsQuery.d.ts +16 -0
- package/dist/src/dataHooks/useUserShareCasePoliciesQuery/index.d.ts +1 -0
- package/dist/src/dataHooks/useUserShareCasePoliciesQuery/useUserShareCasePoliciesQuery.d.ts +3 -0
- package/dist/src/hooks/useOrganizationCasePolicyNameFactory/index.d.ts +1 -0
- package/dist/src/hooks/useOrganizationCasePolicyNameFactory/useOrganizationCasePolicyNameFactory.d.ts +3 -0
- package/dist/src/hooks/useUserCasePolicyNameFactory/index.d.ts +1 -0
- package/dist/src/hooks/useUserCasePolicyNameFactory/useUserCasePolicyNameFactory.d.ts +3 -0
- package/dist/src/index.d.ts +154 -0
- package/dist/src/models/caseAccess.d.ts +15 -0
- package/dist/src/models/config.d.ts +54 -0
- package/dist/src/models/epi.d.ts +185 -0
- package/dist/src/models/theme.d.ts +17 -0
- package/dist/src/models/tree.d.ts +55 -0
- package/dist/src/pages/CaseDbUsersAdminPage/CaseDbUsersAdminPage.d.ts +1 -0
- package/dist/src/pages/CaseDbUsersAdminPage/index.d.ts +1 -0
- package/dist/src/pages/CaseSetCategoryAdminPage/CaseSetCategoryAdminPage.d.ts +1 -0
- package/dist/src/pages/CaseSetCategoryAdminPage/index.d.ts +1 -0
- package/dist/src/pages/CaseSetStatusAdminPage/CaseSetStatusAdminPage.d.ts +1 -0
- package/dist/src/pages/CaseSetStatusAdminPage/index.d.ts +1 -0
- package/dist/src/pages/CaseTypeSetCategoriesAdminPage/CaseTypeSetCategoriesAdminPage.d.ts +1 -0
- package/dist/src/pages/CaseTypeSetCategoriesAdminPage/index.d.ts +1 -0
- package/dist/src/pages/CaseTypeSetsAdminPage/CaseTypeSetsAdminPage.d.ts +1 -0
- package/dist/src/pages/CaseTypeSetsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/CaseTypesAdminPage/CaseTypesAdminPage.d.ts +1 -0
- package/dist/src/pages/CaseTypesAdminPage/index.d.ts +1 -0
- package/dist/src/pages/CasesDetailPage/CasesDetailPage.d.ts +1 -0
- package/dist/src/pages/CasesDetailPage/index.d.ts +1 -0
- package/dist/src/pages/CasesPage/CasesPage.d.ts +1 -0
- package/dist/src/pages/CasesPage/index.d.ts +1 -0
- package/dist/src/pages/ColSetsAdminPage/ColSetsAdminPage.d.ts +1 -0
- package/dist/src/pages/ColSetsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/ColsAdminPage/ColsAdminPage.d.ts +1 -0
- package/dist/src/pages/ColsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/ConceptRelationsAdminPage/ConceptRelationsAdminPage.d.ts +1 -0
- package/dist/src/pages/ConceptRelationsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/ConceptSetsAdminPage/ConceptSetsAdminPage.d.ts +1 -0
- package/dist/src/pages/ConceptSetsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/ConceptsAdminPage/ConceptsAdminPage.d.ts +1 -0
- package/dist/src/pages/ConceptsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/DataCollectionSetsAdminPage/DataCollectionSetsAdminPage.d.ts +1 -0
- package/dist/src/pages/DataCollectionSetsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/DataCollectionVisualizationPage/DataCollectionVisualizationPage.d.ts +1 -0
- package/dist/src/pages/DataCollectionVisualizationPage/index.d.ts +1 -0
- package/dist/src/pages/DataCollectionsAdminPage/DataCollectionsAdminPage.d.ts +1 -0
- package/dist/src/pages/DataCollectionsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/DimsAdminPage/DimsAdminPage.d.ts +1 -0
- package/dist/src/pages/DimsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/DiseasesAdminPage/DiseasesAdminPage.d.ts +1 -0
- package/dist/src/pages/DiseasesAdminPage/index.d.ts +1 -0
- package/dist/src/pages/EtiologicalAgentsAdminPage/EtiologicalAgentsAdminPage.d.ts +1 -0
- package/dist/src/pages/EtiologicalAgentsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/EtiologiesAdminPage/EtiologiesAdminPage.d.ts +1 -0
- package/dist/src/pages/EtiologiesAdminPage/index.d.ts +1 -0
- package/dist/src/pages/EventsDetailPage/EventsDetailPage.d.ts +1 -0
- package/dist/src/pages/EventsDetailPage/index.d.ts +1 -0
- package/dist/src/pages/EventsPage/EventsPage.d.ts +1 -0
- package/dist/src/pages/EventsPage/index.d.ts +1 -0
- package/dist/src/pages/HomePage/HomePage.d.ts +1 -0
- package/dist/src/pages/HomePage/index.d.ts +1 -0
- package/dist/src/pages/OrganizationAccessCasePoliciesAdminPage/OrganizationAccessCasePoliciesAdminPage.d.ts +1 -0
- package/dist/src/pages/OrganizationAccessCasePoliciesAdminPage/index.d.ts +1 -0
- package/dist/src/pages/OrganizationShareCasePoliciesAdminPage/OrganizationShareCasePoliciesAdminPage.d.ts +1 -0
- package/dist/src/pages/OrganizationShareCasePoliciesAdminPage/index.d.ts +1 -0
- package/dist/src/pages/RefColsAdminPage/RefColsAdminPage.d.ts +1 -0
- package/dist/src/pages/RefColsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/RefDimsAdminPage/RefDimsAdminPage.d.ts +1 -0
- package/dist/src/pages/RefDimsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/RegionRelationsAdminPage/RegionRelationsAdminPage.d.ts +1 -0
- package/dist/src/pages/RegionRelationsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/RegionSetShapesAdminPage/RegionSetShapesAdminPage.d.ts +1 -0
- package/dist/src/pages/RegionSetShapesAdminPage/index.d.ts +1 -0
- package/dist/src/pages/RegionSetsAdminPage/RegionSetsAdminPage.d.ts +1 -0
- package/dist/src/pages/RegionSetsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/RegionsAdminPage/RegionsAdminPage.d.ts +1 -0
- package/dist/src/pages/RegionsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/TrendsPage/TrendsPage.d.ts +1 -0
- package/dist/src/pages/TrendsPage/index.d.ts +1 -0
- package/dist/src/pages/UploadPage/UploadPage.d.ts +1 -0
- package/dist/src/pages/UploadPage/index.d.ts +1 -0
- package/dist/src/pages/UserAccessCasePoliciesAdminPage/UserAccessCasePoliciesAdminPage.d.ts +1 -0
- package/dist/src/pages/UserAccessCasePoliciesAdminPage/index.d.ts +1 -0
- package/dist/src/pages/UserEffectiveRightsAdminPage/UserEffectiveRightsAdminPage.d.ts +1 -0
- package/dist/src/pages/UserEffectiveRightsAdminPage/index.d.ts +1 -0
- package/dist/src/pages/UserEffectiveRightsTesterAdminPage/UserEffectiveRightsTesterAdminPage.d.ts +1 -0
- package/dist/src/pages/UserEffectiveRightsTesterAdminPage/index.d.ts +1 -0
- package/dist/src/pages/UserShareCasePoliciesAdminPage/UserShareCasePoliciesAdminPage.d.ts +1 -0
- package/dist/src/pages/UserShareCasePoliciesAdminPage/index.d.ts +1 -0
- package/dist/src/routes/adminRoutes.d.ts +6 -0
- package/dist/src/routes/index.d.ts +2 -0
- package/dist/src/routes/routes.d.ts +6 -0
- package/dist/src/setup/index.d.ts +1 -0
- package/dist/src/setup/setup.d.ts +1 -0
- package/dist/src/stores/epiDashboardStore/epiDashboardStore.d.ts +99 -0
- package/dist/src/stores/epiDashboardStore/epiDashboardStoreContext.d.ts +4 -0
- package/dist/src/stores/epiDashboardStore/index.d.ts +2 -0
- package/dist/src/stores/epiUploadStore/epiUploadStore.d.ts +57 -0
- package/dist/src/stores/epiUploadStore/epiUploadStoreContext.d.ts +4 -0
- package/dist/src/stores/epiUploadStore/index.d.ts +2 -0
- package/dist/src/stores/userProfileStore/index.d.ts +1 -0
- package/dist/src/stores/userProfileStore/userProfileStore.d.ts +42 -0
- package/dist/src/test/lib/CaseDbDemoConfigUtil.d.ts +4 -0
- package/dist/src/test/lib/index.d.ts +1 -0
- package/dist/src/theme/demoTheme/index.d.ts +2 -0
- package/dist/src/utils/AbacUtil/AbacUtil.d.ts +7 -0
- package/dist/src/utils/AbacUtil/index.d.ts +1 -0
- package/dist/src/utils/CaseDbDataUtil/CaseDbDataUtil.d.ts +30 -0
- package/dist/src/utils/CaseDbDataUtil/index.d.ts +1 -0
- package/dist/src/utils/CaseDbDownloadUtil/CaseDbDownloadUtil.d.ts +17 -0
- package/dist/src/utils/CaseDbDownloadUtil/index.d.ts +1 -0
- package/dist/src/utils/CaseDbTableUtil/CaseDbTableUtil.d.ts +6 -0
- package/dist/src/utils/CaseDbTableUtil/index.d.ts +1 -0
- package/dist/src/utils/CaseSelectionUtil/CaseSelectionUtil.d.ts +8 -0
- package/dist/src/utils/CaseSelectionUtil/index.d.ts +1 -0
- package/dist/src/utils/CaseSetUtil/CaseSetUtil.d.ts +4 -0
- package/dist/src/utils/CaseSetUtil/index.d.ts +1 -0
- package/dist/src/utils/CaseTypeUtil/CaseTypeUtil.d.ts +38 -0
- package/dist/src/utils/CaseTypeUtil/index.d.ts +1 -0
- package/dist/src/utils/CaseUtil/CaseUtil.d.ts +25 -0
- package/dist/src/utils/CaseUtil/index.d.ts +1 -0
- package/dist/src/utils/DashboardUtil/DashboardUtil.d.ts +9 -0
- package/dist/src/utils/DashboardUtil/index.d.ts +1 -0
- package/dist/src/utils/DataSetUtil/DataSetUtil.d.ts +17 -0
- package/dist/src/utils/DataSetUtil/index.d.ts +1 -0
- package/dist/src/utils/EffectiveRightsUtil/EffectiveRightsUtil.d.ts +29 -0
- package/dist/src/utils/EffectiveRightsUtil/index.d.ts +1 -0
- package/dist/src/utils/EpiCurveUtil/EpiCurveUtil.d.ts +28 -0
- package/dist/src/utils/EpiCurveUtil/index.d.ts +1 -0
- package/dist/src/utils/EpiFilterUtil/EpiFilterUtil.d.ts +9 -0
- package/dist/src/utils/EpiFilterUtil/index.d.ts +1 -0
- package/dist/src/utils/EpiLineListUtil/EpiLineListUtil.d.ts +5 -0
- package/dist/src/utils/EpiLineListUtil/index.d.ts +1 -0
- package/dist/src/utils/EpiMapUtil/EpiMapUtil.d.ts +25 -0
- package/dist/src/utils/EpiMapUtil/index.d.ts +1 -0
- package/dist/src/utils/EpiTreeUtil/EpiTreeUtil.d.ts +481 -0
- package/dist/src/utils/EpiTreeUtil/index.d.ts +1 -0
- package/dist/src/utils/EpiUploadUtil/EpiUploadUtil.d.ts +110 -0
- package/dist/src/utils/EpiUploadUtil/index.d.ts +1 -0
- package/dist/src/utils/FileUtil/FileUtil.d.ts +5 -0
- package/dist/src/utils/FileUtil/index.d.ts +1 -0
- package/dist/src/utils/NewickUtil/NewickUtil.d.ts +5 -0
- package/dist/src/utils/NewickUtil/index.d.ts +1 -0
- package/package.json +45 -45
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbCaseSet } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const useCaseSetsQuery: () => UseQueryResult<CaseDbCaseSet[]>;
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export declare const useCaseSetsMapQuery: () => UseMap<CaseDbCaseSet>;
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export declare const useCaseSetOptionsQuery: () => UseOptions<string>;
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export * from './useCaseTypeSetCategoriesQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbCaseTypeSetCategory } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const useCaseTypeSetCategoriesQuery: () => UseQueryResult<CaseDbCaseTypeSetCategory[]>;
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export declare const useCaseTypeSetCategoryMapQuery: () => UseMap<CaseDbCaseTypeSetCategory>;
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export declare const useCaseTypeSetCategoryOptionsQuery: () => UseOptions<string>;
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export * from './useCaseTypeSetCategoryPurposeQuery';
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import { CaseDbCaseTypeSetCategoryPurpose } from '@gen-epix/api-casedb';
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import { UseOptions } from '@gen-epix/ui';
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export declare const caseTypeSetCategoryPurposePresentationValues: Record<CaseDbCaseTypeSetCategoryPurpose, string>;
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export declare const useCaseTypeSetCategoryPurposeOptionsQuery: () => UseOptions<string>;
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export * from './useCaseTypeSetMembersQuery';
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export * from './useCaseTypeSetsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbCaseTypeSet } from '@gen-epix/api-casedb';
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import { UseMap, UseNameFactory, UseOptions } from '@gen-epix/ui';
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export declare const useCaseTypeSetsQuery: () => UseQueryResult<CaseDbCaseTypeSet[]>;
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export declare const useCaseTypeSetsMapQuery: () => UseMap<CaseDbCaseTypeSet>;
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export declare const useCaseTypeSetNameFactory: () => UseNameFactory<CaseDbCaseTypeSet>;
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export declare const useCaseTypeSetOptionsQuery: () => UseOptions<string>;
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export * from './useCaseTypeStatsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbCaseStats, CaseDbRetrieveCaseTypeStatsRequestBody } from '@gen-epix/api-casedb';
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export declare const useCaseTypeStatsQuery: (options?: CaseDbRetrieveCaseTypeStatsRequestBody) => UseQueryResult<CaseDbCaseStats[]>;
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export * from './useCaseTypesQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbCaseType } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const caseTypesQueryFn: ({ signal }: {
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signal: AbortSignal;
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}) => Promise<CaseDbCaseType[]>;
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export declare const useCaseTypesQuery: () => UseQueryResult<CaseDbCaseType[]>;
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export declare const useCaseTypeMapQuery: () => UseMap<CaseDbCaseType>;
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export declare const useCaseTypeOptionsQuery: () => UseOptions<string>;
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export * from './useColSetMembersQuery';
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export * from './useColSetsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbColSet } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const useColSetsQuery: () => UseQueryResult<CaseDbColSet[]>;
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export declare const useColSetMapQuery: () => UseMap<CaseDbColSet>;
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export declare const useColSetOptionsQuery: () => UseOptions<string>;
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export * from './useColTypesQuery';
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export * from './useColsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbCol } from '@gen-epix/api-casedb';
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import { UseMap, UseNameFactory, UseOptions } from '@gen-epix/ui';
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export declare const useColsQuery: () => UseQueryResult<CaseDbCol[]>;
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export declare const useColMapQuery: () => UseMap<CaseDbCol>;
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export declare const useColNameFactory: () => UseNameFactory<CaseDbCol>;
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export declare const useColOptionsQuery: () => UseOptions<string>;
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export * from './useConceptQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbConcept } from '@gen-epix/api-casedb';
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import { UseMap, UseNameFactory, UseOptions } from '@gen-epix/ui';
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export declare const useConceptQuery: () => UseQueryResult<CaseDbConcept[]>;
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export declare const useConceptMapQuery: () => UseMap<CaseDbConcept>;
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export declare const useConceptNameFactory: () => UseNameFactory<CaseDbConcept>;
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export declare const useConceptOptionsQuery: () => UseOptions<string>;
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export * from './useConceptRelationTypeQuery';
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import { CaseDbConceptRelationType } from '@gen-epix/api-casedb';
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import { UseOptions } from '@gen-epix/ui';
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export declare const conceptRelationTypePresentationValues: Partial<Record<CaseDbConceptRelationType, string>>;
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export declare const useConceptRelationTypeOptionsQuery: () => UseOptions<string>;
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export * from './useConceptSetTypeQuery';
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import { CaseDbConceptSetType } from '@gen-epix/api-casedb';
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import { UseOptions } from '@gen-epix/ui';
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export declare const conceptSetTypePresentationValues: Partial<Record<CaseDbConceptSetType, string>>;
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export declare const useConceptSetTypeOptionsQuery: () => UseOptions<string>;
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export * from './useConceptSetsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbConceptSet } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const useConceptSetsQuery: () => UseQueryResult<CaseDbConceptSet[]>;
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export declare const useConceptSetMapQuery: () => UseMap<CaseDbConceptSet>;
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export declare const useConceptSetOptionsQuery: () => UseOptions<string>;
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export * from './useDataCollectionSetMembersQuery';
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export * from './useDataCollectionsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbDataCollection } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const useDataCollectionsQuery: (dataCollectionIds?: string[]) => UseQueryResult<CaseDbDataCollection[]>;
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export declare const useDataCollectionsMapQuery: (dataCollectionIds?: string[]) => UseMap<CaseDbDataCollection>;
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export declare const useDataCollectionOptionsQuery: (dataCollectionIds?: string[]) => UseOptions<string>;
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export * from './useDimTypesQuery';
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export * from './useDimsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbDim } from '@gen-epix/api-casedb';
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import { UseMap, UseNameFactory, UseOptions } from '@gen-epix/ui';
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export declare const useDimsQuery: () => UseQueryResult<CaseDbDim[]>;
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5
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export declare const useDimMapQuery: () => UseMap<CaseDbDim>;
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export declare const useDimNameFactory: () => UseNameFactory<CaseDbDim>;
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export declare const useDimOptionsQuery: () => UseOptions<string>;
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export * from './useDiseasesQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbDisease } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const useDiseasesQuery: () => UseQueryResult<CaseDbDisease[]>;
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5
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export declare const useDiseasesMapQuery: () => UseMap<CaseDbDisease>;
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export declare const useDiseaseOptionsQuery: () => UseOptions<string>;
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export * from './useEtiologicalAgentsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbEtiologicalAgent } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const useEtiologicalAgentsQuery: () => UseQueryResult<CaseDbEtiologicalAgent[]>;
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export declare const useEtiologicalAgentsMapQuery: () => UseMap<CaseDbEtiologicalAgent>;
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export declare const useEtiologicalAgentOptionsQuery: () => UseOptions<string>;
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export * from './useGeneticDistanceProtocolsQuery';
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package/dist/src/dataHooks/useGeneticDistanceProtocolsQuery/useGeneticDistanceProtocolsQuery.d.ts
ADDED
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1
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import { UseQueryResult } from '@tanstack/react-query';
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2
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import { CaseDbGeneticDistanceProtocol } from '@gen-epix/api-casedb';
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3
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import { UseOptions } from '@gen-epix/ui';
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4
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export declare const useGeneticDistanceProtocolsQuery: () => UseQueryResult<CaseDbGeneticDistanceProtocol[]>;
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export declare const useGeneticDistanceProtocolOptionsQuery: () => UseOptions<string>;
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export * from './useOrganizationAccessCasePoliciesQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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2
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import { CaseDbOrganizationAccessCasePolicy } from '@gen-epix/api-casedb';
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export declare const useOrganizationAccessCasePoliciesQuery: (select?: (data: CaseDbOrganizationAccessCasePolicy[]) => CaseDbOrganizationAccessCasePolicy[]) => UseQueryResult<CaseDbOrganizationAccessCasePolicy[]>;
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export * from './useOrganizationShareCasePoliciesQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbOrganizationShareCasePolicy } from '@gen-epix/api-casedb';
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export declare const useOrganizationShareCasePoliciesQuery: (select?: (data: CaseDbOrganizationShareCasePolicy[]) => CaseDbOrganizationShareCasePolicy[]) => UseQueryResult<CaseDbOrganizationShareCasePolicy[]>;
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export * from './useRefColsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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2
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import { CaseDbRefCol } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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4
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export declare const useRefColsQuery: () => UseQueryResult<CaseDbRefCol[]>;
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5
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+
export declare const useRefColMapQuery: () => UseMap<CaseDbRefCol>;
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6
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export declare const useRefColOptionsQuery: () => UseOptions<string>;
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export * from './useRefColsValidationRulesQuery';
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export * from './useRefDimsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbRefDim } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const useRefDimsQuery: () => UseQueryResult<CaseDbRefDim[]>;
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export declare const useRefDimMapQuery: () => UseMap<CaseDbRefDim>;
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export declare const useRefDimOptionsQuery: () => UseOptions<string>;
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export * from './useRegionQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbRegion } from '@gen-epix/api-casedb';
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import { UseMap, UseNameFactory, UseOptions } from '@gen-epix/ui';
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export declare const useRegionQuery: () => UseQueryResult<CaseDbRegion[]>;
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export declare const useRegionMapQuery: () => UseMap<CaseDbRegion>;
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export declare const useRegionNameFactory: () => UseNameFactory<CaseDbRegion>;
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export declare const useRegionOptionsQuery: () => UseOptions<string>;
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export * from './useRegionRelationTypeQuery';
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import { CaseDbRegionRelationType } from '@gen-epix/api-casedb';
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import { UseOptions } from '@gen-epix/ui';
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export declare const regionRelationTypePresentationValues: Partial<Record<CaseDbRegionRelationType, string>>;
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export declare const useRegionRelationTypeOptionsQuery: () => UseOptions<string>;
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export * from './useRegionSetsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbRegionSet } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const useRegionSetsQuery: () => UseQueryResult<CaseDbRegionSet[]>;
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export declare const useRegionSetOptionsQuery: () => UseOptions<string>;
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export declare const useRegionSetsMapQuery: () => UseMap<CaseDbRegionSet>;
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export * from './useSequencingProtocolsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbProtocol } from '@gen-epix/api-casedb';
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import { UseMap, UseOptions } from '@gen-epix/ui';
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export declare const useSequencingProtocolsQuery: () => UseQueryResult<CaseDbProtocol[]>;
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export declare const useSequencingProtocolMapQuery: () => UseMap<CaseDbProtocol>;
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export declare const useSequencingProtocolOptionsQuery: () => UseOptions<string>;
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export * from './useTreeAlgorithmCodesQuery';
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import { CaseDbTreeAlgorithmType } from '@gen-epix/api-casedb';
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import { UseOptions } from '@gen-epix/ui';
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export declare const treeAlgorithmCodeValues: Record<CaseDbTreeAlgorithmType, string>;
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export declare const useTreeAlgorithmCodeOptionsQuery: () => UseOptions<string>;
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export * from './useUserAccessCasePoliciesQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbUserAccessCasePolicy } from '@gen-epix/api-casedb';
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export declare const useUserAccessCasePoliciesQuery: (select?: (data: CaseDbUserAccessCasePolicy[]) => CaseDbUserAccessCasePolicy[]) => UseQueryResult<CaseDbUserAccessCasePolicy[]>;
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export * from './useUserEffectiveRightsQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbCaseTypeSetMember, CaseDbColSet, CaseDbColSetMember, CaseDbOrganizationAccessCasePolicy, CaseDbOrganizationShareCasePolicy, CaseDbUser, CaseDbUserAccessCasePolicy, CaseDbUserShareCasePolicy } from '@gen-epix/api-casedb';
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import { UseMap } from '@gen-epix/ui';
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import { UserEffectiveRight } from '../../models/caseAccess';
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export type UserEffectiveRightsQueryResult = {
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caseTypeSetMembers: CaseDbCaseTypeSetMember[];
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colSetMembers: CaseDbColSetMember[];
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colSetsMap: UseMap<CaseDbColSet>['map'];
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effectiveRights: UserEffectiveRight[];
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organizationAccessCasePolicies: CaseDbOrganizationAccessCasePolicy[];
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organizationShareCasePolicies: CaseDbOrganizationShareCasePolicy[];
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user: CaseDbUser;
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userAccessCasePolicies: CaseDbUserAccessCasePolicy[];
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userShareCasePolicies: CaseDbUserShareCasePolicy[];
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};
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export declare const useUserEffectiveRightsQuery: (userId: string) => Partial<UseQueryResult<UserEffectiveRightsQueryResult>>;
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export * from './useUserShareCasePoliciesQuery';
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import { UseQueryResult } from '@tanstack/react-query';
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import { CaseDbUserShareCasePolicy } from '@gen-epix/api-casedb';
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export declare const useUserShareCasePoliciesQuery: (select?: (data: CaseDbUserShareCasePolicy[]) => CaseDbUserShareCasePolicy[]) => UseQueryResult<CaseDbUserShareCasePolicy[]>;
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export * from './useOrganizationCasePolicyNameFactory';
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import { CaseDbOrganizationAccessCasePolicy, CaseDbOrganizationShareCasePolicy } from '@gen-epix/api-casedb';
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import { UseNameFactory } from '@gen-epix/ui';
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export declare const useOrganizationCasePolicyNameFactory: () => UseNameFactory<CaseDbOrganizationAccessCasePolicy | CaseDbOrganizationShareCasePolicy>;
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export * from './useUserCasePolicyNameFactory';
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export * from './utils/NewickUtil';
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export * from './utils/FileUtil';
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export * from './utils/EpiUploadUtil';
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export * from './utils/EpiTreeUtil';
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export * from './utils/EpiMapUtil';
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export * from './utils/EpiLineListUtil';
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export * from './utils/EpiFilterUtil';
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export * from './utils/EpiCurveUtil';
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export * from './utils/EffectiveRightsUtil';
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export * from './utils/DataSetUtil';
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export * from './utils/DashboardUtil';
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export * from './utils/CaseUtil';
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export * from './utils/CaseTypeUtil';
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export * from './utils/CaseSetUtil';
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export * from './utils/CaseSelectionUtil';
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export * from './utils/CaseDbTableUtil';
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export * from './utils/CaseDbDownloadUtil';
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export * from './utils/CaseDbDataUtil';
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export * from './utils/AbacUtil';
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export * from './theme/demoTheme';
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export * from './test/lib';
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export * from './stores/userProfileStore';
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export * from './stores/epiUploadStore';
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export * from './stores/epiDashboardStore';
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export * from './setup';
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export * from './routes';
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export * from './pages/UserShareCasePoliciesAdminPage';
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export * from './pages/UserEffectiveRightsTesterAdminPage';
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export * from './pages/UserEffectiveRightsAdminPage';
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export * from './pages/UserAccessCasePoliciesAdminPage';
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export * from './pages/UploadPage';
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export * from './pages/TrendsPage';
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export * from './pages/RegionsAdminPage';
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export * from './pages/RegionSetsAdminPage';
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export * from './pages/RegionSetShapesAdminPage';
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export * from './pages/RegionRelationsAdminPage';
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export * from './pages/RefDimsAdminPage';
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export * from './pages/RefColsAdminPage';
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export * from './pages/OrganizationShareCasePoliciesAdminPage';
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export * from './pages/OrganizationAccessCasePoliciesAdminPage';
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export * from './pages/HomePage';
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export * from './pages/EventsPage';
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export * from './pages/EventsDetailPage';
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export * from './pages/EtiologiesAdminPage';
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export * from './pages/EtiologicalAgentsAdminPage';
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export * from './pages/DiseasesAdminPage';
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export * from './pages/DimsAdminPage';
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export * from './pages/DataCollectionsAdminPage';
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export * from './pages/DataCollectionVisualizationPage';
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export * from './pages/DataCollectionSetsAdminPage';
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export * from './pages/ConceptsAdminPage';
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export * from './pages/ConceptSetsAdminPage';
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export * from './pages/ConceptRelationsAdminPage';
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export * from './pages/ColsAdminPage';
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export * from './pages/ColSetsAdminPage';
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export * from './pages/CasesPage';
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export * from './pages/CasesDetailPage';
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export * from './pages/CaseTypesAdminPage';
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export * from './pages/CaseTypeSetsAdminPage';
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export * from './pages/CaseTypeSetCategoriesAdminPage';
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export * from './pages/CaseSetStatusAdminPage';
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export * from './pages/CaseSetCategoryAdminPage';
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export * from './pages/CaseDbUsersAdminPage';
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export * from './models/caseAccess.ts';
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export * from './models/config.ts';
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export * from './models/epi.ts';
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export * from './models/theme.ts';
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+
export * from './models/tree.ts';
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export * from './hooks/useUserCasePolicyNameFactory';
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+
export * from './hooks/useOrganizationCasePolicyNameFactory';
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+
export * from './dataHooks/useUserShareCasePoliciesQuery';
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+
export * from './dataHooks/useUserEffectiveRightsQuery';
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export * from './dataHooks/useUserAccessCasePoliciesQuery';
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export * from './dataHooks/useTreeAlgorithmCodesQuery';
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+
export * from './dataHooks/useSequencingProtocolsQuery';
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export * from './dataHooks/useRegionSetsQuery';
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export * from './dataHooks/useRegionRelationTypeQuery';
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+
export * from './dataHooks/useRegionQuery';
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+
export * from './dataHooks/useRefDimsQuery';
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+
export * from './dataHooks/useRefColsValidationRulesQuery';
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81
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+
export * from './dataHooks/useRefColsQuery';
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82
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+
export * from './dataHooks/useOrganizationShareCasePoliciesQuery';
|
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83
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+
export * from './dataHooks/useOrganizationAccessCasePoliciesQuery';
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84
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+
export * from './dataHooks/useGeneticDistanceProtocolsQuery';
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+
export * from './dataHooks/useEtiologicalAgentsQuery';
|
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86
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+
export * from './dataHooks/useDiseasesQuery';
|
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87
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+
export * from './dataHooks/useDimsQuery';
|
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88
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+
export * from './dataHooks/useDimTypesQuery';
|
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89
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+
export * from './dataHooks/useDataCollectionsQuery';
|
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90
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+
export * from './dataHooks/useDataCollectionSetMembersQuery';
|
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91
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+
export * from './dataHooks/useConceptSetsQuery';
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92
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+
export * from './dataHooks/useConceptSetTypeQuery';
|
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93
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+
export * from './dataHooks/useConceptRelationTypeQuery';
|
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94
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+
export * from './dataHooks/useConceptQuery';
|
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95
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+
export * from './dataHooks/useColsQuery';
|
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96
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+
export * from './dataHooks/useColTypesQuery';
|
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97
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+
export * from './dataHooks/useColSetsQuery';
|
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98
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+
export * from './dataHooks/useColSetMembersQuery';
|
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99
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+
export * from './dataHooks/useCaseTypesQuery';
|
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100
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+
export * from './dataHooks/useCaseTypeStatsQuery';
|
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101
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+
export * from './dataHooks/useCaseTypeSetsQuery';
|
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102
|
+
export * from './dataHooks/useCaseTypeSetMembersQuery';
|
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103
|
+
export * from './dataHooks/useCaseTypeSetCategoryPurposeQuery';
|
|
104
|
+
export * from './dataHooks/useCaseTypeSetCategoriesQuery';
|
|
105
|
+
export * from './dataHooks/useCaseSetsQuery';
|
|
106
|
+
export * from './dataHooks/useCaseSetStatusesQuery';
|
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107
|
+
export * from './dataHooks/useCaseSetStatsQuery';
|
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108
|
+
export * from './dataHooks/useCaseSetRightsQuery';
|
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109
|
+
export * from './dataHooks/useCaseSetCategoriesQuery';
|
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110
|
+
export * from './dataHooks/useCaseRightsQuery';
|
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111
|
+
export * from './dataHooks/useAssemblyProtocolsQuery';
|
|
112
|
+
export * from './data/query.ts';
|
|
113
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+
export * from './context/caseTypeAbac';
|
|
114
|
+
export * from './context/caseAbac';
|
|
115
|
+
export * from './components/ui/UsersEffectiveRightsDetailsDialog';
|
|
116
|
+
export * from './components/ui/PhylogeneticTreeComponent';
|
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117
|
+
export * from './components/ui/HomePageTrends';
|
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118
|
+
export * from './components/ui/FileSelector';
|
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119
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+
export * from './components/epi/EpiWidgetUnavailable';
|
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120
|
+
export * from './components/epi/EpiWidgetMenu';
|
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121
|
+
export * from './components/epi/EpiWidgetHeaderIconButton';
|
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122
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+
export * from './components/epi/EpiWidget';
|
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123
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+
export * from './components/epi/EpiWarning';
|
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124
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+
export * from './components/epi/EpiUserRightsDialog';
|
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125
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+
export * from './components/epi/EpiUpload';
|
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126
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+
export * from './components/epi/EpiTreeWidget';
|
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127
|
+
export * from './components/epi/EpiTreeDescription';
|
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128
|
+
export * from './components/epi/EpiStratification';
|
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129
|
+
export * from './components/epi/EpiSequenceDownloadDialog';
|
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130
|
+
export * from './components/epi/EpiRemoveCasesFromEventDialog';
|
|
131
|
+
export * from './components/epi/EpiMapWidget';
|
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132
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+
export * from './components/epi/EpiLineListWidget';
|
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133
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+
export * from './components/epi/EpiLegendaItem';
|
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134
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+
export * from './components/epi/EpiFindSimilarCasesDialog';
|
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135
|
+
export * from './components/epi/EpiDataCollectionAccessInfo';
|
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136
|
+
export * from './components/epi/EpiDashboardStoreLoader';
|
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137
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+
export * from './components/epi/EpiDashboard';
|
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138
|
+
export * from './components/epi/EpiCustomTabPanel';
|
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139
|
+
export * from './components/epi/EpiCurveWidget';
|
|
140
|
+
export * from './components/epi/EpiCreateEventDialog';
|
|
141
|
+
export * from './components/epi/EpiContextMenu';
|
|
142
|
+
export * from './components/epi/EpiCompletCaseTypeLoader';
|
|
143
|
+
export * from './components/epi/EpiCasesAlreadyInCaseSetWarning';
|
|
144
|
+
export * from './components/epi/EpiCaseTypeInfoDialog';
|
|
145
|
+
export * from './components/epi/EpiCaseSummary';
|
|
146
|
+
export * from './components/epi/EpiCaseSetInfoDialog';
|
|
147
|
+
export * from './components/epi/EpiCaseInfoDialog';
|
|
148
|
+
export * from './components/epi/EpiBulkEditCaseDialog';
|
|
149
|
+
export * from './components/epi/EpiAddCasesToEventDialog';
|
|
150
|
+
export * from './classes/managers/EpiLineListCaseSetMembersManager';
|
|
151
|
+
export * from './classes/managers/EpiHighlightingManager';
|
|
152
|
+
export * from './classes/managers/EpiEventBusManager';
|
|
153
|
+
export * from './classes/managers/EpiDataManager';
|
|
154
|
+
export * from './classes/errors';
|
|
@@ -0,0 +1,15 @@
|
|
|
1
|
+
import { CaseDbOrganizationAccessCasePolicy, CaseDbUserAccessCasePolicy, CaseDbUserShareCasePolicy } from '@gen-epix/api-casedb';
|
|
2
|
+
export type UserEffectiveRight = {
|
|
3
|
+
readonly categorized_read_col_ids: string[];
|
|
4
|
+
readonly categorized_write_col_ids: string[];
|
|
5
|
+
readonly effective_share_case_rights: Array<Pick<CaseDbUserShareCasePolicy, 'add_case_set' | 'add_case' | 'from_data_collection_id' | 'remove_case_set' | 'remove_case'> & UserEffectiveRightCaseTypes>;
|
|
6
|
+
readonly read_col_set_ids: string[];
|
|
7
|
+
readonly uncategorized_read_col_ids: string[];
|
|
8
|
+
readonly uncategorized_write_col_ids: string[];
|
|
9
|
+
readonly write_col_set_ids: string[];
|
|
10
|
+
} & Omit<CaseDbOrganizationAccessCasePolicy & CaseDbUserAccessCasePolicy, 'case_type_set_id' | 'id' | 'is_active' | 'user_id'> & UserEffectiveRightCaseTypes;
|
|
11
|
+
export type UserEffectiveRightCaseTypes = {
|
|
12
|
+
readonly case_type_set_ids: string[];
|
|
13
|
+
readonly categorized_case_type_ids: string[];
|
|
14
|
+
readonly uncategorized_case_type_ids: string[];
|
|
15
|
+
};
|