@erosolaraijs/cure 1.0.3 → 1.0.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/bin/cure.d.ts +9 -0
- package/dist/bin/cure.d.ts.map +1 -1
- package/dist/bin/cure.js +647 -35
- package/dist/bin/cure.js.map +1 -1
- package/dist/index.d.ts +13 -18
- package/dist/index.d.ts.map +1 -1
- package/dist/index.js +12 -18
- package/dist/index.js.map +1 -1
- package/package.json +1 -1
- package/src/bin/cure.ts +718 -38
- package/src/index.ts +268 -0
package/dist/bin/cure.js.map
CHANGED
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@@ -1 +1 @@
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1
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-
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1
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+
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package/dist/index.d.ts
CHANGED
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@@ -21,16 +21,18 @@
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21
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* @packageDocumentation
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22
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*/
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23
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export { CancerTreatmentCapabilityModule, type CancerTreatmentOperationType, type CancerPatient, type CancerTreatmentOperation, type CancerTreatmentResult, type TreatmentProtocol, type DrugTarget, type ImmunotherapyProtocol, type CombinationTherapy, type CancerCureResult } from './capabilities/cancerTreatmentCapability.js';
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24
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-
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-
export {
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-
export
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-
export {
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-
export {
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-
export {
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-
export {
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-
export {
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|
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-
export {
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-
export {
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+
import { RealWorldOncologyService as RWOService, createRealWorldOncologyService as createRWOService, type RealWorldConfig as RWConfig, type RealWorldPatient, type ComprehensiveTreatmentPlan, type TreatmentOutcome } from './orchestrator/realWorldOncology.js';
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25
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+
export { RWOService as RealWorldOncologyService, createRWOService as createRealWorldOncologyService };
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26
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+
export type { RWConfig as RealWorldConfig, RealWorldPatient, ComprehensiveTreatmentPlan, TreatmentOutcome };
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27
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+
export { FHIRClient, EpicFHIRClient, CernerFHIRClient, createFHIRClient, type FHIRConfig, type FHIRPatient, type FHIRIdentifier, type FHIRHumanName, type FHIRAddress, type FHIRContactPoint, type FHIRCodeableConcept, type FHIRCoding, type FHIRExtension, type FHIRCondition, type FHIRObservation, type FHIRQuantity, type FHIRReference, type FHIRMedicationRequest, type FHIRDosage, type FHIRDiagnosticReport, type FHIRProcedure, type FHIRBundle, type FHIRResource, type CancerDiagnosis, type CancerBiomarkers, type TreatmentHistory, type AuditEvent } from './integrations/ehr/index.js';
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28
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+
export { FoundationMedicineClient, GuardantHealthClient, TempusClient, UnifiedGenomicsService, createGenomicClient, type GenomicTestOrder, type GenomicTestResult, type GenomicVariant, type CopyNumberAlteration, type GeneFusion, type GenomicBiomarker, type MSIResult, type TMBResult, type HRDResult, type LOHResult, type TherapyMatch, type ClinicalTrialMatch, type GenomicPlatformConfig } from './integrations/genomics/index.js';
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29
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+
export { ClinicalTrialsGovClient, type ClinicalTrial, type TrialStatus, type TrialPhase, type TrialIntervention, type TrialEligibility, type TrialLocation, type TrialSponsor, type TrialContact, type TrialArm, type TrialOutcome, type BiomarkerRequirement, type TrialSearchParams, type TrialSearchResult, type PatientProfile, type TrialMatch } from './integrations/clinicalTrials/index.js';
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30
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+
export { HIPAAComplianceService, type AuditLogEntry, type AuditEventType, type AuditAction, type PatientConsent, type ConsentType, type DataCategory, type ConsentPurpose, type AccessPolicy, type AccessCondition, type AccessDecision, type EncryptionConfig, type EncryptedData, type DataMaskingConfig } from './compliance/index.js';
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|
31
|
+
export { OutcomePredictorService, type PatientFeatures, type TreatmentFeatures, type ResponsePrediction, type SurvivalPrediction, type ToxicityPrediction, type ResistancePrediction, type TherapyRanking, type MLModel, type ModelRegistry } from './ml/index.js';
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|
32
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+
export { DrugSafetyService, type Drug, type CYP450Profile, type DrugInteraction, type Contraindication, type DosingGuideline, type AllergyCheck, type SafetyAlert, type PatientSafetyProfile } from './safety/index.js';
|
|
33
|
+
export { RetrospectiveValidationService, type ValidationPatient, type SystemRecommendation, type ValidationResult, type CohortAnalysis } from './validation/index.js';
|
|
34
|
+
export { ClinicalDecisionSupportService, type ClinicalRecommendation, type ClinicianOverride, type OverrideCategory, type TumorBoardCase, type AlertAcknowledgment } from './clinician/index.js';
|
|
35
|
+
export { PatientPortalService, type PatientAccount, type PatientTreatmentSummary, type SymptomReport, type MedicationAdherenceLog, type QualityOfLifeAssessment, type PatientMessage, type EducationalContent, type AppointmentRequest } from './patient/index.js';
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|
34
36
|
/**
|
|
35
37
|
* Quick start factory to create a fully configured oncology service
|
|
36
38
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*
|
|
@@ -54,12 +56,5 @@ export { PatientPortalService, PatientAccountManager, TreatmentSummaryService, S
|
|
|
54
56
|
* const plan = await platform.generateComprehensivePlan(patient, 'DR001');
|
|
55
57
|
* ```
|
|
56
58
|
*/
|
|
57
|
-
export declare function createOncologyPlatform(config?: Partial<
|
|
58
|
-
declare const _default: {
|
|
59
|
-
createOncologyPlatform: typeof createOncologyPlatform;
|
|
60
|
-
createRealWorldOncologyService: any;
|
|
61
|
-
CancerTreatmentCapabilityModule: any;
|
|
62
|
-
RealWorldOncologyService: any;
|
|
63
|
-
};
|
|
64
|
-
export default _default;
|
|
59
|
+
export declare function createOncologyPlatform(config?: Partial<RWConfig>): Promise<RWOService>;
|
|
65
60
|
//# sourceMappingURL=index.d.ts.map
|
package/dist/index.d.ts.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;GAqBG;AAMH,OAAO,EACL,+BAA+B,EAC/B,KAAK,4BAA4B,EACjC,KAAK,aAAa,EAClB,KAAK,wBAAwB,EAC7B,KAAK,qBAAqB,EAC1B,KAAK,iBAAiB,EACtB,KAAK,UAAU,EACf,KAAK,qBAAqB,EAC1B,KAAK,kBAAkB,EACvB,KAAK,gBAAgB,EACtB,MAAM,6CAA6C,CAAC;AAMrD,OAAO,EACL,wBAAwB,
|
|
1
|
+
{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;GAqBG;AAMH,OAAO,EACL,+BAA+B,EAC/B,KAAK,4BAA4B,EACjC,KAAK,aAAa,EAClB,KAAK,wBAAwB,EAC7B,KAAK,qBAAqB,EAC1B,KAAK,iBAAiB,EACtB,KAAK,UAAU,EACf,KAAK,qBAAqB,EAC1B,KAAK,kBAAkB,EACvB,KAAK,gBAAgB,EACtB,MAAM,6CAA6C,CAAC;AAMrD,OAAO,EACL,wBAAwB,IAAI,UAAU,EACtC,8BAA8B,IAAI,gBAAgB,EAClD,KAAK,eAAe,IAAI,QAAQ,EAChC,KAAK,gBAAgB,EACrB,KAAK,0BAA0B,EAC/B,KAAK,gBAAgB,EACtB,MAAM,qCAAqC,CAAC;AAE7C,OAAO,EACL,UAAU,IAAI,wBAAwB,EACtC,gBAAgB,IAAI,8BAA8B,EACnD,CAAC;AACF,YAAY,EACV,QAAQ,IAAI,eAAe,EAC3B,gBAAgB,EAChB,0BAA0B,EAC1B,gBAAgB,EACjB,CAAC;AAOF,OAAO,EACL,UAAU,EACV,cAAc,EACd,gBAAgB,EAChB,gBAAgB,EAChB,KAAK,UAAU,EACf,KAAK,WAAW,EAChB,KAAK,cAAc,EACnB,KAAK,aAAa,EAClB,KAAK,WAAW,EAChB,KAAK,gBAAgB,EACrB,KAAK,mBAAmB,EACxB,KAAK,UAAU,EACf,KAAK,aAAa,EAClB,KAAK,aAAa,EAClB,KAAK,eAAe,EACpB,KAAK,YAAY,EACjB,KAAK,aAAa,EAClB,KAAK,qBAAqB,EAC1B,KAAK,UAAU,EACf,KAAK,oBAAoB,EACzB,KAAK,aAAa,EAClB,KAAK,UAAU,EACf,KAAK,YAAY,EACjB,KAAK,eAAe,EACpB,KAAK,gBAAgB,EACrB,KAAK,gBAAgB,EACrB,KAAK,UAAU,EAChB,MAAM,6BAA6B,CAAC;AAGrC,OAAO,EACL,wBAAwB,EACxB,oBAAoB,EACpB,YAAY,EACZ,sBAAsB,EACtB,mBAAmB,EACnB,KAAK,gBAAgB,EACrB,KAAK,iBAAiB,EACtB,KAAK,cAAc,EACnB,KAAK,oBAAoB,EACzB,KAAK,UAAU,EACf,KAAK,gBAAgB,EACrB,KAAK,SAAS,EACd,KAAK,SAAS,EACd,KAAK,SAAS,EACd,KAAK,SAAS,EACd,KAAK,YAAY,EACjB,KAAK,kBAAkB,EACvB,KAAK,qBAAqB,EAC3B,MAAM,kCAAkC,CAAC;AAG1C,OAAO,EACL,uBAAuB,EACvB,KAAK,aAAa,EAClB,KAAK,WAAW,EAChB,KAAK,UAAU,EACf,KAAK,iBAAiB,EACtB,KAAK,gBAAgB,EACrB,KAAK,aAAa,EAClB,KAAK,YAAY,EACjB,KAAK,YAAY,EACjB,KAAK,QAAQ,EACb,KAAK,YAAY,EACjB,KAAK,oBAAoB,EACzB,KAAK,iBAAiB,EACtB,KAAK,iBAAiB,EACtB,KAAK,cAAc,EACnB,KAAK,UAAU,EAChB,MAAM,wCAAwC,CAAC;AAMhD,OAAO,EACL,sBAAsB,EACtB,KAAK,aAAa,EAClB,KAAK,cAAc,EACnB,KAAK,WAAW,EAChB,KAAK,cAAc,EACnB,KAAK,WAAW,EAChB,KAAK,YAAY,EACjB,KAAK,cAAc,EACnB,KAAK,YAAY,EACjB,KAAK,eAAe,EACpB,KAAK,cAAc,EACnB,KAAK,gBAAgB,EACrB,KAAK,aAAa,EAClB,KAAK,iBAAiB,EACvB,MAAM,uBAAuB,CAAC;AAM/B,OAAO,EACL,uBAAuB,EACvB,KAAK,eAAe,EACpB,KAAK,iBAAiB,EACtB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EACvB,KAAK,oBAAoB,EACzB,KAAK,cAAc,EACnB,KAAK,OAAO,EACZ,KAAK,aAAa,EACnB,MAAM,eAAe,CAAC;AAMvB,OAAO,EACL,iBAAiB,EACjB,KAAK,IAAI,EACT,KAAK,aAAa,EAClB,KAAK,eAAe,EACpB,KAAK,gBAAgB,EACrB,KAAK,eAAe,EACpB,KAAK,YAAY,EACjB,KAAK,WAAW,EAChB,KAAK,oBAAoB,EAC1B,MAAM,mBAAmB,CAAC;AAM3B,OAAO,EACL,8BAA8B,EAC9B,KAAK,iBAAiB,EACtB,KAAK,oBAAoB,EACzB,KAAK,gBAAgB,EACrB,KAAK,cAAc,EACpB,MAAM,uBAAuB,CAAC;AAM/B,OAAO,EACL,8BAA8B,EAC9B,KAAK,sBAAsB,EAC3B,KAAK,iBAAiB,EACtB,KAAK,gBAAgB,EACrB,KAAK,cAAc,EACnB,KAAK,mBAAmB,EACzB,MAAM,sBAAsB,CAAC;AAM9B,OAAO,EACL,oBAAoB,EACpB,KAAK,cAAc,EACnB,KAAK,uBAAuB,EAC5B,KAAK,aAAa,EAClB,KAAK,sBAAsB,EAC3B,KAAK,uBAAuB,EAC5B,KAAK,cAAc,EACnB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EACxB,MAAM,oBAAoB,CAAC;AAM5B;;;;;;;;;;;;;;;;;;;;;;GAsBG;AACH,wBAAsB,sBAAsB,CAAC,MAAM,CAAC,EAAE,OAAO,CAAC,QAAQ,CAAC,GAAG,OAAO,CAAC,UAAU,CAAC,CAI5F"}
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package/dist/index.js
CHANGED
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@@ -27,40 +27,41 @@ export { CancerTreatmentCapabilityModule } from './capabilities/cancerTreatmentC
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27
27
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// ═══════════════════════════════════════════════════════════════════════════════
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|
28
28
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// REAL-WORLD ORCHESTRATION
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|
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29
|
// ═══════════════════════════════════════════════════════════════════════════════
|
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30
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-
|
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30
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+
import { RealWorldOncologyService as RWOService, createRealWorldOncologyService as createRWOService } from './orchestrator/realWorldOncology.js';
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|
31
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+
export { RWOService as RealWorldOncologyService, createRWOService as createRealWorldOncologyService };
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31
32
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// ═══════════════════════════════════════════════════════════════════════════════
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32
33
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// INTEGRATIONS
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33
34
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// ═══════════════════════════════════════════════════════════════════════════════
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|
34
35
|
// EHR Integration (HL7 FHIR)
|
|
35
|
-
export { FHIRClient,
|
|
36
|
+
export { FHIRClient, EpicFHIRClient, CernerFHIRClient, createFHIRClient } from './integrations/ehr/index.js';
|
|
36
37
|
// Genomic Platforms
|
|
37
|
-
export { FoundationMedicineClient, GuardantHealthClient, TempusClient, UnifiedGenomicsService } from './integrations/genomics/index.js';
|
|
38
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+
export { FoundationMedicineClient, GuardantHealthClient, TempusClient, UnifiedGenomicsService, createGenomicClient } from './integrations/genomics/index.js';
|
|
38
39
|
// Clinical Trials
|
|
39
|
-
export { ClinicalTrialsGovClient
|
|
40
|
+
export { ClinicalTrialsGovClient } from './integrations/clinicalTrials/index.js';
|
|
40
41
|
// ═══════════════════════════════════════════════════════════════════════════════
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41
42
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// COMPLIANCE
|
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42
43
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// ═══════════════════════════════════════════════════════════════════════════════
|
|
43
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-
export { HIPAAComplianceService
|
|
44
|
+
export { HIPAAComplianceService } from './compliance/index.js';
|
|
44
45
|
// ═══════════════════════════════════════════════════════════════════════════════
|
|
45
46
|
// MACHINE LEARNING
|
|
46
47
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// ═══════════════════════════════════════════════════════════════════════════════
|
|
47
|
-
export {
|
|
48
|
+
export { OutcomePredictorService } from './ml/index.js';
|
|
48
49
|
// ═══════════════════════════════════════════════════════════════════════════════
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|
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50
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// SAFETY
|
|
50
51
|
// ═══════════════════════════════════════════════════════════════════════════════
|
|
51
|
-
export { DrugSafetyService
|
|
52
|
+
export { DrugSafetyService } from './safety/index.js';
|
|
52
53
|
// ═══════════════════════════════════════════════════════════════════════════════
|
|
53
54
|
// VALIDATION
|
|
54
55
|
// ═══════════════════════════════════════════════════════════════════════════════
|
|
55
|
-
export {
|
|
56
|
+
export { RetrospectiveValidationService } from './validation/index.js';
|
|
56
57
|
// ═══════════════════════════════════════════════════════════════════════════════
|
|
57
58
|
// CLINICIAN SUPPORT
|
|
58
59
|
// ═══════════════════════════════════════════════════════════════════════════════
|
|
59
|
-
export {
|
|
60
|
+
export { ClinicalDecisionSupportService } from './clinician/index.js';
|
|
60
61
|
// ═══════════════════════════════════════════════════════════════════════════════
|
|
61
62
|
// PATIENT PORTAL
|
|
62
63
|
// ═══════════════════════════════════════════════════════════════════════════════
|
|
63
|
-
export { PatientPortalService
|
|
64
|
+
export { PatientPortalService } from './patient/index.js';
|
|
64
65
|
// ═══════════════════════════════════════════════════════════════════════════════
|
|
65
66
|
// QUICK START FACTORY
|
|
66
67
|
// ═══════════════════════════════════════════════════════════════════════════════
|
|
@@ -88,15 +89,8 @@ export { PatientPortalService, PatientAccountManager, TreatmentSummaryService, S
|
|
|
88
89
|
* ```
|
|
89
90
|
*/
|
|
90
91
|
export async function createOncologyPlatform(config) {
|
|
91
|
-
const service =
|
|
92
|
+
const service = createRWOService(config);
|
|
92
93
|
await service.initialize();
|
|
93
94
|
return service;
|
|
94
95
|
}
|
|
95
|
-
// Default export
|
|
96
|
-
export default {
|
|
97
|
-
createOncologyPlatform,
|
|
98
|
-
createRealWorldOncologyService,
|
|
99
|
-
CancerTreatmentCapabilityModule,
|
|
100
|
-
RealWorldOncologyService
|
|
101
|
-
};
|
|
102
96
|
//# sourceMappingURL=index.js.map
|
package/dist/index.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;GAqBG;AAEH,kFAAkF;AAClF,oBAAoB;AACpB,kFAAkF;AAElF,OAAO,EACL,+BAA+B,EAUhC,MAAM,6CAA6C,CAAC;AAErD,kFAAkF;AAClF,2BAA2B;AAC3B,kFAAkF;AAElF,OAAO,EACL,wBAAwB,
|
|
1
|
+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;GAqBG;AAEH,kFAAkF;AAClF,oBAAoB;AACpB,kFAAkF;AAElF,OAAO,EACL,+BAA+B,EAUhC,MAAM,6CAA6C,CAAC;AAErD,kFAAkF;AAClF,2BAA2B;AAC3B,kFAAkF;AAElF,OAAO,EACL,wBAAwB,IAAI,UAAU,EACtC,8BAA8B,IAAI,gBAAgB,EAKnD,MAAM,qCAAqC,CAAC;AAE7C,OAAO,EACL,UAAU,IAAI,wBAAwB,EACtC,gBAAgB,IAAI,8BAA8B,EACnD,CAAC;AAQF,kFAAkF;AAClF,eAAe;AACf,kFAAkF;AAElF,6BAA6B;AAC7B,OAAO,EACL,UAAU,EACV,cAAc,EACd,gBAAgB,EAChB,gBAAgB,EAwBjB,MAAM,6BAA6B,CAAC;AAErC,oBAAoB;AACpB,OAAO,EACL,wBAAwB,EACxB,oBAAoB,EACpB,YAAY,EACZ,sBAAsB,EACtB,mBAAmB,EAcpB,MAAM,kCAAkC,CAAC;AAE1C,kBAAkB;AAClB,OAAO,EACL,uBAAuB,EAgBxB,MAAM,wCAAwC,CAAC;AAEhD,kFAAkF;AAClF,aAAa;AACb,kFAAkF;AAElF,OAAO,EACL,sBAAsB,EAcvB,MAAM,uBAAuB,CAAC;AAE/B,kFAAkF;AAClF,mBAAmB;AACnB,kFAAkF;AAElF,OAAO,EACL,uBAAuB,EAUxB,MAAM,eAAe,CAAC;AAEvB,kFAAkF;AAClF,SAAS;AACT,kFAAkF;AAElF,OAAO,EACL,iBAAiB,EASlB,MAAM,mBAAmB,CAAC;AAE3B,kFAAkF;AAClF,aAAa;AACb,kFAAkF;AAElF,OAAO,EACL,8BAA8B,EAK/B,MAAM,uBAAuB,CAAC;AAE/B,kFAAkF;AAClF,oBAAoB;AACpB,kFAAkF;AAElF,OAAO,EACL,8BAA8B,EAM/B,MAAM,sBAAsB,CAAC;AAE9B,kFAAkF;AAClF,iBAAiB;AACjB,kFAAkF;AAElF,OAAO,EACL,oBAAoB,EASrB,MAAM,oBAAoB,CAAC;AAE5B,kFAAkF;AAClF,sBAAsB;AACtB,kFAAkF;AAElF;;;;;;;;;;;;;;;;;;;;;;GAsBG;AACH,MAAM,CAAC,KAAK,UAAU,sBAAsB,CAAC,MAA0B;IACrE,MAAM,OAAO,GAAG,gBAAgB,CAAC,MAAM,CAAC,CAAC;IACzC,MAAM,OAAO,CAAC,UAAU,EAAE,CAAC;IAC3B,OAAO,OAAO,CAAC;AACjB,CAAC"}
|
package/package.json
CHANGED