@elevasis/core 0.23.0 → 0.24.0

package/src/organization-model/graph/build.ts

@@ -1,953 +1,1081 @@
-import { BuildOrganizationGraphInputSchema, OrganizationGraphSchema } from './schema'
-import type { CommandViewData } from '../../platform/registry/command-view'
-import type {
-  BuildOrganizationGraphInput,
+import { BuildOrganizationGraphInputSchema, OrganizationGraphSchema } from './schema'
+import type { CommandViewData } from '../../platform/registry/command-view'
+import type {
+  BuildOrganizationGraphInput,
   OrganizationGraph,
   OrganizationGraphEdge,
+  OrganizationGraphEdgeKind,
   OrganizationGraphNode,
   OrganizationGraphNodeKind
 } from './types'
-import type { ActionInvocation } from '../domains/actions'
-import type { Entity } from '../domains/entities'
-import type { ResourceEntry } from '../domains/resources'
-import type { EventDescriptor, OrganizationModelSidebarNode } from '../types'
-import {
-  getAllPipelines,
-  getAllBuildTemplates,
-  getAllProjectStatuses,
-  getAllProspectingStages
-} from '../migration-helpers'
+import type { ActionInvocation } from '../domains/actions'
+import type { Entity } from '../domains/entities'
+import type { ResourceEntry } from '../domains/resources'
+import type { EventDescriptor, OrganizationModelSidebarNode } from '../types'
+import {
+  getAllPipelines,
+  getAllBuildTemplates,
+  getAllProjectStatuses,
+  getAllProspectingStages
+} from '../migration-helpers'
 import { LEAD_GEN_STAGE_CATALOG } from '../catalogs/lead-gen'
 import { listAllSystems } from '../helpers'
-
-type EventEmissionDescriptor = NonNullable<Extract<ResourceEntry, { kind: 'workflow' }>['emits']>[number]
-
-function nodeId(kind: OrganizationGraphNodeKind, sourceId?: string): string {
-  return kind === 'organization' ? 'organization-model' : `${kind}:${sourceId ?? ''}`
-}
-
-function edgeId(kind: string, sourceId: string, targetId: string, variant?: string): string {
-  return variant ? `edge:${kind}:${variant}:${sourceId}:${targetId}` : `edge:${kind}:${sourceId}:${targetId}`
-}
-
-function pushUniqueNode(nodes: OrganizationGraphNode[], seen: Set<string>, node: OrganizationGraphNode): void {
-  if (seen.has(node.id)) return
-  seen.add(node.id)
-  nodes.push(node)
-}
-
-function pushUniqueEdge(edges: OrganizationGraphEdge[], seen: Set<string>, edge: OrganizationGraphEdge): void {
-  if (seen.has(edge.id)) return
-  seen.add(edge.id)
-  edges.push(edge)
-}
-
-function collectSidebarGraphNodes(
-  nodes: Record<string, OrganizationModelSidebarNode>,
-  groups: Array<{
-    id: string
-    node: Extract<OrganizationModelSidebarNode, { type: 'group' }>
-    parentGroupId?: string
-  }>,
-  surfaces: Array<{
-    id: string
-    node: Extract<OrganizationModelSidebarNode, { type: 'surface' }>
-    parentGroupId?: string
-  }>,
-  parentGroupId?: string
-): void {
-  Object.entries(nodes)
-    .sort(([leftId, left], [rightId, right]) => {
-      const orderDelta = (left.order ?? Number.MAX_SAFE_INTEGER) - (right.order ?? Number.MAX_SAFE_INTEGER)
-      return orderDelta === 0 ? leftId.localeCompare(rightId) : orderDelta
-    })
-    .forEach(([id, node]) => {
-      if (node.type === 'group') {
-        groups.push({ id, node, ...(parentGroupId !== undefined ? { parentGroupId } : {}) })
-        collectSidebarGraphNodes(node.children, groups, surfaces, id)
-        return
-      }
-
-      surfaces.push({ id, node, ...(parentGroupId !== undefined ? { parentGroupId } : {}) })
-    })
-}
-
-function upsertResourceNode(
-  nodes: OrganizationGraphNode[],
-  seen: Set<string>,
-  resourceNodesById: Map<string, OrganizationGraphNode>,
-  node: OrganizationGraphNode
-): OrganizationGraphNode {
-  const existing = resourceNodesById.get(node.id)
-  if (existing) {
-    if (!existing.label || existing.label === existing.sourceId) {
-      existing.label = node.label
-    }
-    if (!existing.description && node.description) {
-      existing.description = node.description
-    }
-    if (!existing.sourceId && node.sourceId) {
-      existing.sourceId = node.sourceId
-    }
-    if (!existing.resourceType && node.resourceType) {
-      existing.resourceType = node.resourceType
-    }
-    return existing
-  }
-
-  resourceNodesById.set(node.id, node)
-  pushUniqueNode(nodes, seen, node)
-  return node
-}
-
-function ensureResourceNode(
-  nodes: OrganizationGraphNode[],
-  seen: Set<string>,
-  resourceNodesById: Map<string, OrganizationGraphNode>,
-  resourceId: string
-): OrganizationGraphNode {
-  const existing = resourceNodesById.get(nodeId('resource', resourceId))
-  if (existing) return existing
-
-  return upsertResourceNode(nodes, seen, resourceNodesById, {
-    id: nodeId('resource', resourceId),
-    kind: 'resource',
-    label: resourceId,
-    sourceId: resourceId
-  })
-}
-
-type CommandViewResource =
-  | CommandViewData['workflows'][number]
-  | CommandViewData['agents'][number]
-  | CommandViewData['triggers'][number]
-  | CommandViewData['integrations'][number]
-  | CommandViewData['externalResources'][number]
-  | CommandViewData['humanCheckpoints'][number]
-
-function normalizeCommandViewResourceType(
-  resourceType: CommandViewResource['type']
-): OrganizationGraphNode['resourceType'] {
-  return resourceType === 'human' ? 'human_checkpoint' : resourceType
-}
-
-function normalizeOrganizationModelResourceType(
-  resourceType: ResourceEntry['kind']
-): OrganizationGraphNode['resourceType'] {
-  return resourceType
-}
-
-function collectCommandViewResources(commandViewData: CommandViewData): CommandViewResource[] {
-  return [
-    ...commandViewData.workflows,
-    ...commandViewData.agents,
-    ...commandViewData.triggers,
-    ...commandViewData.integrations,
-    ...commandViewData.externalResources,
-    ...commandViewData.humanCheckpoints
-  ]
-}
-
-function invocationSignature(invocation: ActionInvocation): string {
-  switch (invocation.kind) {
-    case 'slash-command':
-      return `${invocation.kind}:${invocation.command}`
-    case 'mcp-tool':
-      return `${invocation.kind}:${invocation.server}:${invocation.name}`
-    case 'api-endpoint':
-      return `${invocation.kind}:${invocation.method}:${invocation.path}`
-    case 'script-execution':
-      return `${invocation.kind}:${invocation.resourceId}`
-  }
-}
-
-function invocationLabel(invocation: ActionInvocation): string {
-  switch (invocation.kind) {
-    case 'slash-command':
-      return invocation.command
-    case 'mcp-tool':
-      return `${invocation.server}.${invocation.name}`
-    case 'api-endpoint':
-      return `${invocation.method} ${invocation.path}`
-    case 'script-execution':
-      return `script ${invocation.resourceId}`
-  }
-}
-
+import {
+  compileOrganizationOntology,
+  listResolvedOntologyRecords,
+  ontologyGraphNodeId,
+  parseOntologyId,
+  type OntologyActionType,
+  type OntologyCatalogType,
+  type OntologyGroup,
+  type OntologyId,
+  type OntologyLinkType
+} from '../ontology'
+
+type EventEmissionDescriptor = NonNullable<Extract<ResourceEntry, { kind: 'workflow' }>['emits']>[number]
+
+function nodeId(kind: OrganizationGraphNodeKind, sourceId?: string): string {
+  return kind === 'organization' ? 'organization-model' : `${kind}:${sourceId ?? ''}`
+}
+
+function edgeId(kind: string, sourceId: string, targetId: string, variant?: string): string {
+  return variant ? `edge:${kind}:${variant}:${sourceId}:${targetId}` : `edge:${kind}:${sourceId}:${targetId}`
+}
+
+function pushUniqueNode(nodes: OrganizationGraphNode[], seen: Set<string>, node: OrganizationGraphNode): void {
+  if (seen.has(node.id)) return
+  seen.add(node.id)
+  nodes.push(node)
+}
+
+function pushUniqueEdge(edges: OrganizationGraphEdge[], seen: Set<string>, edge: OrganizationGraphEdge): void {
+  if (seen.has(edge.id)) return
+  seen.add(edge.id)
+  edges.push(edge)
+}
+
+function collectSidebarGraphNodes(
+  nodes: Record<string, OrganizationModelSidebarNode>,
+  groups: Array<{
+    id: string
+    node: Extract<OrganizationModelSidebarNode, { type: 'group' }>
+    parentGroupId?: string
+  }>,
+  surfaces: Array<{
+    id: string
+    node: Extract<OrganizationModelSidebarNode, { type: 'surface' }>
+    parentGroupId?: string
+  }>,
+  parentGroupId?: string
+): void {
+  Object.entries(nodes)
+    .sort(([leftId, left], [rightId, right]) => {
+      const orderDelta = (left.order ?? Number.MAX_SAFE_INTEGER) - (right.order ?? Number.MAX_SAFE_INTEGER)
+      return orderDelta === 0 ? leftId.localeCompare(rightId) : orderDelta
+    })
+    .forEach(([id, node]) => {
+      if (node.type === 'group') {
+        groups.push({ id, node, ...(parentGroupId !== undefined ? { parentGroupId } : {}) })
+        collectSidebarGraphNodes(node.children, groups, surfaces, id)
+        return
+      }
+
+      surfaces.push({ id, node, ...(parentGroupId !== undefined ? { parentGroupId } : {}) })
+    })
+}
+
+function upsertResourceNode(
+  nodes: OrganizationGraphNode[],
+  seen: Set<string>,
+  resourceNodesById: Map<string, OrganizationGraphNode>,
+  node: OrganizationGraphNode
+): OrganizationGraphNode {
+  const existing = resourceNodesById.get(node.id)
+  if (existing) {
+    if (!existing.label || existing.label === existing.sourceId) {
+      existing.label = node.label
+    }
+    if (!existing.description && node.description) {
+      existing.description = node.description
+    }
+    if (!existing.sourceId && node.sourceId) {
+      existing.sourceId = node.sourceId
+    }
+    if (!existing.resourceType && node.resourceType) {
+      existing.resourceType = node.resourceType
+    }
+    return existing
+  }
+
+  resourceNodesById.set(node.id, node)
+  pushUniqueNode(nodes, seen, node)
+  return node
+}
+
+function ensureResourceNode(
+  nodes: OrganizationGraphNode[],
+  seen: Set<string>,
+  resourceNodesById: Map<string, OrganizationGraphNode>,
+  resourceId: string
+): OrganizationGraphNode {
+  const existing = resourceNodesById.get(nodeId('resource', resourceId))
+  if (existing) return existing
+
+  return upsertResourceNode(nodes, seen, resourceNodesById, {
+    id: nodeId('resource', resourceId),
+    kind: 'resource',
+    label: resourceId,
+    sourceId: resourceId
+  })
+}
+
+type CommandViewResource =
+  | CommandViewData['workflows'][number]
+  | CommandViewData['agents'][number]
+  | CommandViewData['triggers'][number]
+  | CommandViewData['integrations'][number]
+  | CommandViewData['externalResources'][number]
+  | CommandViewData['humanCheckpoints'][number]
+
+function normalizeCommandViewResourceType(
+  resourceType: CommandViewResource['type']
+): OrganizationGraphNode['resourceType'] {
+  return resourceType === 'human' ? 'human_checkpoint' : resourceType
+}
+
+function normalizeOrganizationModelResourceType(
+  resourceType: ResourceEntry['kind']
+): OrganizationGraphNode['resourceType'] {
+  return resourceType
+}
+
+function collectCommandViewResources(commandViewData: CommandViewData): CommandViewResource[] {
+  return [
+    ...commandViewData.workflows,
+    ...commandViewData.agents,
+    ...commandViewData.triggers,
+    ...commandViewData.integrations,
+    ...commandViewData.externalResources,
+    ...commandViewData.humanCheckpoints
+  ]
+}
+
+function invocationSignature(invocation: ActionInvocation): string {
+  switch (invocation.kind) {
+    case 'slash-command':
+      return `${invocation.kind}:${invocation.command}`
+    case 'mcp-tool':
+      return `${invocation.kind}:${invocation.server}:${invocation.name}`
+    case 'api-endpoint':
+      return `${invocation.kind}:${invocation.method}:${invocation.path}`
+    case 'script-execution':
+      return `${invocation.kind}:${invocation.resourceId}`
+  }
+}
+
+function invocationLabel(invocation: ActionInvocation): string {
+  switch (invocation.kind) {
+    case 'slash-command':
+      return invocation.command
+    case 'mcp-tool':
+      return `${invocation.server}.${invocation.name}`
+    case 'api-endpoint':
+      return `${invocation.method} ${invocation.path}`
+    case 'script-execution':
+      return `script ${invocation.resourceId}`
+  }
+}
+
 function eventNodeId(eventId: string): string {
   return nodeId('event', eventId)
 }
 
-function buildResourceEventDescriptor(resourceId: string, emission: EventEmissionDescriptor): EventDescriptor {
-  return {
-    ...emission,
-    id: `${resourceId}:${emission.eventKey}`,
-    ownerId: resourceId,
-    ownerKind: 'resource'
-  }
+function ontologyLabel(id: OntologyId, label: string | undefined): string {
+  return label ?? parseOntologyId(id).localId
 }
 
-function buildEntityEventDescriptor(entity: Entity, eventKey: string, label: string): EventDescriptor {
-  return {
-    id: `${entity.id}:${eventKey}`,
-    ownerId: entity.id,
-    ownerKind: 'entity',
-    eventKey,
-    label
-  }
-}
-
-function pushEventProjection(
-  nodes: OrganizationGraphNode[],
-  nodeIds: Set<string>,
+function pushOntologyBindingEdges(
   edges: OrganizationGraphEdge[],
   edgeIds: Set<string>,
-  eventNodeIdsByEventId: Map<string, string>,
-  event: EventDescriptor,
-  sourceNodeId: string,
-  edgeKind: 'emits' | 'originates_from'
+  resourceNodeId: string,
+  kind: OrganizationGraphEdgeKind,
+  ids: OntologyId[] | undefined
 ): void {
-  const id = eventNodeId(event.id)
-  eventNodeIdsByEventId.set(event.id, id)
-  pushUniqueNode(nodes, nodeIds, {
-    id,
-    kind: 'event',
-    label: event.label,
-    sourceId: event.id
-  })
-  const sourceId = edgeKind === 'originates_from' ? id : sourceNodeId
-  const targetId = edgeKind === 'originates_from' ? sourceNodeId : id
-  pushUniqueEdge(edges, edgeIds, {
-    id: edgeId(edgeKind, sourceId, targetId),
-    kind: edgeKind,
-    sourceId,
-    targetId
+  ids?.forEach((ontologyId) => {
+    const targetId = ontologyGraphNodeId(ontologyId)
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId(kind, resourceNodeId, targetId),
+      kind,
+      sourceId: resourceNodeId,
+      targetId
+    })
   })
 }
-
-export function buildOrganizationGraph(input: BuildOrganizationGraphInput): OrganizationGraph {
-  const parsed = BuildOrganizationGraphInputSchema.parse(input)
-  const organizationModel = parsed.organizationModel
-  const commandViewData = parsed.commandViewData as CommandViewData | undefined
-
-  const nodes: OrganizationGraphNode[] = []
-  const edges: OrganizationGraphEdge[] = []
-  const nodeIds = new Set<string>()
-  const edgeIds = new Set<string>()
-  const resourceNodesById = new Map<string, OrganizationGraphNode>()
+
+function buildResourceEventDescriptor(resourceId: string, emission: EventEmissionDescriptor): EventDescriptor {
+  return {
+    ...emission,
+    id: `${resourceId}:${emission.eventKey}`,
+    ownerId: resourceId,
+    ownerKind: 'resource'
+  }
+}
+
+function buildEntityEventDescriptor(entity: Entity, eventKey: string, label: string): EventDescriptor {
+  return {
+    id: `${entity.id}:${eventKey}`,
+    ownerId: entity.id,
+    ownerKind: 'entity',
+    eventKey,
+    label
+  }
+}
+
+function pushEventProjection(
+  nodes: OrganizationGraphNode[],
+  nodeIds: Set<string>,
+  edges: OrganizationGraphEdge[],
+  edgeIds: Set<string>,
+  eventNodeIdsByEventId: Map<string, string>,
+  event: EventDescriptor,
+  sourceNodeId: string,
+  edgeKind: 'emits' | 'originates_from'
+): void {
+  const id = eventNodeId(event.id)
+  eventNodeIdsByEventId.set(event.id, id)
+  pushUniqueNode(nodes, nodeIds, {
+    id,
+    kind: 'event',
+    label: event.label,
+    sourceId: event.id
+  })
+  const sourceId = edgeKind === 'originates_from' ? id : sourceNodeId
+  const targetId = edgeKind === 'originates_from' ? sourceNodeId : id
+  pushUniqueEdge(edges, edgeIds, {
+    id: edgeId(edgeKind, sourceId, targetId),
+    kind: edgeKind,
+    sourceId,
+    targetId
+  })
+}
+
+export function buildOrganizationGraph(input: BuildOrganizationGraphInput): OrganizationGraph {
+  const parsed = BuildOrganizationGraphInputSchema.parse(input)
+  const organizationModel = parsed.organizationModel
+  const commandViewData = parsed.commandViewData as CommandViewData | undefined
+
+  const nodes: OrganizationGraphNode[] = []
+  const edges: OrganizationGraphEdge[] = []
+  const nodeIds = new Set<string>()
+  const edgeIds = new Set<string>()
+  const resourceNodesById = new Map<string, OrganizationGraphNode>()
   const organizationModelResourceIds = new Set(Object.keys(organizationModel.resources))
   const actionIdsByInvocation = new Map<string, string[]>()
   const projectedEventNodeIdsByEventId = new Map<string, string>()
-
-  const organizationNode: OrganizationGraphNode = {
-    id: nodeId('organization'),
-    kind: 'organization',
-    label: 'Organization Model'
-  }
-  pushUniqueNode(nodes, nodeIds, organizationNode)
-  const systemsWithPaths = listAllSystems(organizationModel)
-  const systemPathByRef = new Map<string, string>()
-  for (const { path, system } of systemsWithPaths) {
-    systemPathByRef.set(path, path)
-    systemPathByRef.set(system.id, path)
-  }
-  const validSystemRefs = new Set(systemPathByRef.keys())
-  const systemNodeId = (systemRef: string) => nodeId('system', systemPathByRef.get(systemRef) ?? systemRef)
-
+  const ontologyCompilation = compileOrganizationOntology(organizationModel)
+
+  const organizationNode: OrganizationGraphNode = {
+    id: nodeId('organization'),
+    kind: 'organization',
+    label: 'Organization Model'
+  }
+  pushUniqueNode(nodes, nodeIds, organizationNode)
+  const systemsWithPaths = listAllSystems(organizationModel)
+  const systemPathByRef = new Map<string, string>()
+  for (const { path, system } of systemsWithPaths) {
+    systemPathByRef.set(path, path)
+    systemPathByRef.set(system.id, path)
+  }
+  const validSystemRefs = new Set(systemPathByRef.keys())
+  const systemNodeId = (systemRef: string) => nodeId('system', systemPathByRef.get(systemRef) ?? systemRef)
+
   for (const { path, system } of systemsWithPaths.sort((a, b) => a.path.localeCompare(b.path))) {
-    const id = nodeId('system', path)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'system',
-      label: system.label ?? system.title ?? system.id,
-      sourceId: path,
-      description: system.description,
-      icon: system.ui?.icon ?? system.icon,
-      enabled: system.enabled
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', organizationNode.id, id),
-      kind: 'contains',
-      sourceId: organizationNode.id,
-      targetId: id
-    })
-    const parentSystemId = path.includes('.') ? path.slice(0, path.lastIndexOf('.')) : undefined
-    if (parentSystemId !== undefined) {
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('contains', nodeId('system', parentSystemId), id),
-        kind: 'contains',
-        sourceId: nodeId('system', parentSystemId),
-        targetId: id
-      })
-    }
+    const id = nodeId('system', path)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'system',
+      label: system.label ?? system.title ?? system.id,
+      sourceId: path,
+      description: system.description,
+      icon: system.ui?.icon ?? system.icon,
+      enabled: system.enabled
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', organizationNode.id, id),
+      kind: 'contains',
+      sourceId: organizationNode.id,
+      targetId: id
+    })
+    const parentSystemId = path.includes('.') ? path.slice(0, path.lastIndexOf('.')) : undefined
+    if (parentSystemId !== undefined) {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('contains', nodeId('system', parentSystemId), id),
+        kind: 'contains',
+        sourceId: nodeId('system', parentSystemId),
+        targetId: id
+      })
+    }
   }
 
-  for (const role of Object.values(organizationModel.roles).sort((a, b) => a.id.localeCompare(b.id))) {
-    const id = nodeId('role', role.id)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'role',
-      label: role.title,
-      sourceId: role.id,
-      description: role.responsibilities.length > 0 ? role.responsibilities.join('; ') : undefined
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', organizationNode.id, id),
-      kind: 'contains',
-      sourceId: organizationNode.id,
-      targetId: id
-    })
-    if (role.reportsToId !== undefined) {
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('references', id, nodeId('role', role.reportsToId), 'reports-to'),
-        kind: 'references',
-        sourceId: id,
-        targetId: nodeId('role', role.reportsToId),
-        label: 'reports to'
-      })
-    }
-    for (const systemId of role.responsibleFor ?? []) {
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('governs', id, systemNodeId(systemId), 'responsible-for'),
-        kind: 'governs',
-        sourceId: id,
-        targetId: systemNodeId(systemId),
-        label: 'responsible for'
-      })
-    }
-  }
-
-  // Phase 4: knowledge is now Record<id, OrgKnowledgeNode> (D3); iterate Object.values.
-  for (const node of Object.values(organizationModel.knowledge).sort((a, b) => a.id.localeCompare(b.id))) {
-    const id = nodeId('knowledge', node.id)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'knowledge',
-      label: node.title,
-      sourceId: node.id,
-      description: node.summary,
-      icon: node.icon
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', organizationNode.id, id),
-      kind: 'contains',
-      sourceId: organizationNode.id,
-      targetId: id
-    })
-    for (const link of node.links) {
-      const targetId = link.target.kind === 'system' ? systemNodeId(link.target.id) : link.nodeId
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('governs', id, targetId),
-        kind: 'governs',
-        sourceId: id,
-        targetId
-      })
-    }
-  }
-
-  // Phase 4: prospecting domain removed; read stages via migration helper.
-  const allStages = [
-    ...getAllProspectingStages(organizationModel, 'company'),
-    ...getAllProspectingStages(organizationModel, 'contact')
-  ].sort((a, b) => a.order - b.order || a.id.localeCompare(b.id))
-
-  for (const stage of allStages) {
-    const id = nodeId('stage', stage.id)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'stage',
-      label: stage.label,
-      sourceId: stage.id,
-      ...(stage.description ? { description: stage.description } : {}),
-      ...(stage.icon ? { icon: stage.icon } : {})
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', organizationNode.id, id),
-      kind: 'contains',
-      sourceId: organizationNode.id,
-      targetId: id
-    })
-  }
-
-  for (const action of Object.values(organizationModel.actions).sort((a, b) => a.id.localeCompare(b.id))) {
-    const id = nodeId('action', action.id)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'action',
-      label: action.label,
-      sourceId: action.id,
-      description: action.description
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', organizationNode.id, id),
-      kind: 'contains',
-      sourceId: organizationNode.id,
-      targetId: id
-    })
-    if (action.resourceId !== undefined) {
-      const resourceNode = ensureResourceNode(nodes, nodeIds, resourceNodesById, action.resourceId)
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('maps_to', id, resourceNode.id),
-        kind: 'maps_to',
-        sourceId: id,
-        targetId: resourceNode.id
-      })
-    }
-
-    for (const entityId of action.affects ?? []) {
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('affects', id, nodeId('entity', entityId)),
-        kind: 'affects',
-        sourceId: id,
-        targetId: nodeId('entity', entityId)
-      })
-    }
-
-    for (const invocation of action.invocations) {
-      const key = invocationSignature(invocation)
-      const existing = actionIdsByInvocation.get(key)
-      if (existing) {
-        existing.push(id)
-      } else {
-        actionIdsByInvocation.set(key, [id])
-      }
-    }
-  }
-
-  for (const entity of Object.values(organizationModel.entities).sort(
-    (a, b) => a.order - b.order || a.id.localeCompare(b.id)
+  for (const { id: ontologyId, kind, record } of listResolvedOntologyRecords(ontologyCompilation.ontology).sort((a, b) =>
+    a.id.localeCompare(b.id)
   )) {
-    const id = nodeId('entity', entity.id)
+    const id = ontologyGraphNodeId(ontologyId)
+    const parsedId = parseOntologyId(ontologyId)
     pushUniqueNode(nodes, nodeIds, {
       id,
-      kind: 'entity',
-      label: entity.label,
-      sourceId: entity.id,
-      description: entity.description
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', systemNodeId(entity.ownedBySystemId), id, 'system-entity'),
-      kind: 'contains',
-      sourceId: systemNodeId(entity.ownedBySystemId),
-      targetId: id
-    })
-
-    for (const [linkIndex, link] of (entity.links ?? []).entries()) {
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('links', id, nodeId('entity', link.toEntity), `${link.kind}-${linkIndex}`),
-        kind: 'links',
-        sourceId: id,
-        targetId: nodeId('entity', link.toEntity),
-        label: link.label ?? link.kind
-      })
-    }
-
-    if (entity.stateCatalogId !== undefined) {
-      const stateEvents: EventDescriptor[] = []
-
-      // Phase 4: model.statuses removed (D1). Status data lives in system.content.
-      // Graph projection of statuses via content nodes is Wave 5 work.
-      // For now, emit no status-derived state events from the deleted domain field.
-
-      if (entity.stateCatalogId === 'crm.pipeline') {
-        // Phase 4: model.sales removed (D8). Read pipelines via migration helper.
-        for (const { pipeline } of getAllPipelines(organizationModel)
-          .filter(({ pipeline: p }) => p.entityId === entity.id)
-          .sort((a, b) => a.pipeline.id.localeCompare(b.pipeline.id))) {
-          for (const stage of [...pipeline.stages].sort((a, b) => a.order - b.order || a.id.localeCompare(b.id))) {
-            stateEvents.push(buildEntityEventDescriptor(entity, stage.id, stage.label))
-          }
-        }
-      }
-
-      if (entity.stateCatalogId === 'delivery.task') {
-        // Phase 4: model.projects removed (D8). Read statuses via migration helper.
-        for (const status of getAllProjectStatuses(organizationModel, 'task').sort(
-          (a, b) => a.order - b.order || a.id.localeCompare(b.id)
-        )) {
-          stateEvents.push(buildEntityEventDescriptor(entity, status.id, status.label))
-        }
-      }
-
-      if (entity.stateCatalogId === 'lead-gen.company' || entity.stateCatalogId === 'lead-gen.contact') {
-        const leadGenEntity = entity.stateCatalogId === 'lead-gen.company' ? 'company' : 'contact'
-        for (const stage of Object.values(LEAD_GEN_STAGE_CATALOG).sort(
-          (a, b) => a.order - b.order || a.key.localeCompare(b.key)
-        )) {
-          if (stage.entity !== leadGenEntity && !(stage.additionalEntities ?? []).includes(leadGenEntity)) continue
-          stateEvents.push(buildEntityEventDescriptor(entity, stage.key, stage.label))
-        }
-      }
-
-      for (const event of stateEvents) {
-        pushEventProjection(
-          nodes,
-          nodeIds,
-          edges,
-          edgeIds,
-          projectedEventNodeIdsByEventId,
-          event,
-          id,
-          'originates_from'
-        )
-      }
-    }
-  }
-
-  for (const { path, system } of systemsWithPaths.sort((a, b) => a.path.localeCompare(b.path))) {
-    for (const actionRef of system.actions ?? []) {
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('uses', nodeId('system', path), nodeId('action', actionRef.actionId), actionRef.intent),
-        kind: 'uses',
-        sourceId: nodeId('system', path),
-        targetId: nodeId('action', actionRef.actionId),
-        label: actionRef.intent
-      })
-    }
-  }
-
-  // Pre-compute the set of valid system paths so the resource loop below can
-  // skip dangling-path edge emission in O(1) per resource.  Belt-and-suspenders
-  // against the Wave 2 superRefine; reachable only for partial-OM fixture cases.
-  const validSystemPaths = new Set([...validSystemRefs])
-
-  for (const resource of Object.values(organizationModel.resources).sort((a, b) => a.id.localeCompare(b.id))) {
-    const resourceNode = upsertResourceNode(nodes, nodeIds, resourceNodesById, {
-      id: nodeId('resource', resource.id),
-      kind: 'resource',
-      label: resource.id,
-      sourceId: resource.id,
-      resourceType: normalizeOrganizationModelResourceType(resource.kind)
+      kind: 'ontology',
+      label: ontologyLabel(ontologyId, record.label),
+      sourceId: ontologyId,
+      description: record.description,
+      ontologyKind: kind
     })
 
-    // Skip the contains edge if the systemPath doesn't resolve to a real system.
-    // In a fully-validated model this never fires; it guards partial-OM fixtures.
-    if (validSystemPaths.has(resource.systemPath)) {
+    const ownerSystemId = record.ownerSystemId ?? (parsedId.isGlobal ? undefined : parsedId.scope)
+    if (ownerSystemId !== undefined && validSystemRefs.has(ownerSystemId)) {
       pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('contains', systemNodeId(resource.systemPath), resourceNode.id, 'system-resource'),
+        id: edgeId('contains', systemNodeId(ownerSystemId), id, `ontology-${kind}`),
         kind: 'contains',
-        sourceId: systemNodeId(resource.systemPath),
-        targetId: resourceNode.id
-      })
-    }
-
-    if (resource.kind === 'workflow' || resource.kind === 'agent') {
-      for (const emission of resource.emits ?? []) {
-        pushEventProjection(
-          nodes,
-          nodeIds,
-          edges,
-          edgeIds,
-          projectedEventNodeIdsByEventId,
-          buildResourceEventDescriptor(resource.id, emission),
-          resourceNode.id,
-          'emits'
-        )
-      }
-    }
-
-    if (resource.kind === 'agent') {
-      for (const [index, invocation] of resource.invocations.entries()) {
-        const label = invocationLabel(invocation)
-        if (invocation.kind === 'script-execution') {
-          const targetNode = ensureResourceNode(nodes, nodeIds, resourceNodesById, invocation.resourceId)
-          pushUniqueEdge(edges, edgeIds, {
-            id: edgeId('uses', resourceNode.id, targetNode.id, `agent-invocation-${index}`),
-            kind: 'uses',
-            sourceId: resourceNode.id,
-            targetId: targetNode.id,
-            label
-          })
-          continue
-        }
-
-        for (const actionNodeId of actionIdsByInvocation.get(invocationSignature(invocation)) ?? []) {
-          pushUniqueEdge(edges, edgeIds, {
-            id: edgeId('references', resourceNode.id, actionNodeId, `agent-invocation-${index}`),
-            kind: 'references',
-            sourceId: resourceNode.id,
-            targetId: actionNodeId,
-            label
-          })
-        }
-      }
-    }
-  }
-
-  for (const policy of Object.values(organizationModel.policies).sort(
-    (a, b) => a.order - b.order || a.id.localeCompare(b.id)
-  )) {
-    const id = nodeId('policy', policy.id)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'policy',
-      label: policy.label,
-      sourceId: policy.id,
-      description: policy.description
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', organizationNode.id, id),
-      kind: 'contains',
-      sourceId: organizationNode.id,
-      targetId: id
-    })
-
-    for (const systemId of policy.appliesTo.systemIds) {
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('applies_to', id, systemNodeId(systemId), 'system'),
-        kind: 'applies_to',
-        sourceId: id,
-        targetId: systemNodeId(systemId)
-      })
-    }
-    for (const actionId of policy.appliesTo.actionIds) {
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('applies_to', id, nodeId('action', actionId), 'action'),
-        kind: 'applies_to',
-        sourceId: id,
-        targetId: nodeId('action', actionId)
-      })
-    }
-    for (const resourceId of policy.appliesTo.resourceIds) {
-      const resourceNode = ensureResourceNode(nodes, nodeIds, resourceNodesById, resourceId)
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('applies_to', id, resourceNode.id, 'resource'),
-        kind: 'applies_to',
-        sourceId: id,
-        targetId: resourceNode.id
+        sourceId: systemNodeId(ownerSystemId),
+        targetId: id
       })
-    }
-    for (const roleId of policy.appliesTo.roleIds) {
+    } else {
       pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('applies_to', id, nodeId('role', roleId), 'role'),
-        kind: 'applies_to',
-        sourceId: id,
-        targetId: nodeId('role', roleId)
+        id: edgeId('contains', organizationNode.id, id, `ontology-${kind}`),
+        kind: 'contains',
+        sourceId: organizationNode.id,
+        targetId: id
       })
     }
 
-    if (policy.trigger.kind === 'event') {
-      const eventNode = projectedEventNodeIdsByEventId.get(policy.trigger.eventId)
-      if (eventNode !== undefined) {
-        pushUniqueEdge(edges, edgeIds, {
-          id: edgeId('triggers', eventNode, id),
-          kind: 'triggers',
-          sourceId: eventNode,
-          targetId: id
-        })
-      }
-    } else if (policy.trigger.kind === 'action-invocation') {
+    if (kind === 'link') {
+      const link = record as OntologyLinkType
       pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('triggers', nodeId('action', policy.trigger.actionId), id),
-        kind: 'triggers',
-        sourceId: nodeId('action', policy.trigger.actionId),
-        targetId: id
+        id: edgeId('links', ontologyGraphNodeId(link.from), ontologyGraphNodeId(link.to), ontologyId),
+        kind: 'links',
+        sourceId: ontologyGraphNodeId(link.from),
+        targetId: ontologyGraphNodeId(link.to),
+        label: link.label ?? parsedId.localId
       })
     }
 
-    for (const [effectIndex, effect] of policy.actions.entries()) {
-      if (effect.kind === 'invoke-action') {
+    if (kind === 'action') {
+      const action = record as OntologyActionType
+      for (const targetOntologyId of action.actsOn ?? []) {
         pushUniqueEdge(edges, edgeIds, {
-          id: edgeId('effects', id, nodeId('action', effect.actionId), `invoke-action-${effectIndex}`),
-          kind: 'effects',
+          id: edgeId('affects', id, ontologyGraphNodeId(targetOntologyId), ontologyId),
+          kind: 'affects',
           sourceId: id,
-          targetId: nodeId('action', effect.actionId),
-          label: 'invoke action'
+          targetId: ontologyGraphNodeId(targetOntologyId)
         })
       }
-      if ((effect.kind === 'notify-role' || effect.kind === 'require-approval') && effect.roleId !== undefined) {
-        pushUniqueEdge(edges, edgeIds, {
-          id: edgeId('effects', id, nodeId('role', effect.roleId), `${effect.kind}-${effectIndex}`),
-          kind: 'effects',
-          sourceId: id,
-          targetId: nodeId('role', effect.roleId),
-          label: effect.kind
-        })
-      }
-    }
-  }
-
-  for (const segment of Object.values(organizationModel.customers).sort(
-    (a, b) => a.order - b.order || a.id.localeCompare(b.id)
-  )) {
-    const id = nodeId('customer-segment', segment.id)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'customer-segment',
-      label: segment.name,
-      sourceId: segment.id,
-      description: segment.description || undefined
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', organizationNode.id, id),
-      kind: 'contains',
-      sourceId: organizationNode.id,
-      targetId: id
-    })
-  }
-
-  for (const product of Object.values(organizationModel.offerings).sort(
-    (a, b) => a.order - b.order || a.id.localeCompare(b.id)
-  )) {
-    const id = nodeId('offering', product.id)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'offering',
-      label: product.name,
-      sourceId: product.id,
-      description: product.description || undefined
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', organizationNode.id, id),
-      kind: 'contains',
-      sourceId: organizationNode.id,
-      targetId: id
-    })
-    for (const segmentId of product.targetSegmentIds) {
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('applies_to', id, nodeId('customer-segment', segmentId), 'targets-segment'),
-        kind: 'applies_to',
-        sourceId: id,
-        targetId: nodeId('customer-segment', segmentId),
-        label: 'targets'
-      })
     }
-  }
-
-  for (const objective of Object.values(organizationModel.goals).sort(
-    (a, b) => a.order - b.order || a.id.localeCompare(b.id)
-  )) {
-    const id = nodeId('goal', objective.id)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'goal',
-      label: objective.description,
-      sourceId: objective.id
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', organizationNode.id, id),
-      kind: 'contains',
-      sourceId: organizationNode.id,
-      targetId: id
-    })
-  }
-
-  const sidebarGroups: Array<{
-    id: string
-    node: Extract<OrganizationModelSidebarNode, { type: 'group' }>
-    parentGroupId?: string
-  }> = []
-  const sidebarSurfaces: Array<{
-    id: string
-    node: Extract<OrganizationModelSidebarNode, { type: 'surface' }>
-    parentGroupId?: string
-  }> = []
-  collectSidebarGraphNodes(organizationModel.navigation.sidebar.primary, sidebarGroups, sidebarSurfaces)
-  collectSidebarGraphNodes(organizationModel.navigation.sidebar.bottom, sidebarGroups, sidebarSurfaces)
-
-  for (const { id: surfaceSourceId, node: surface, parentGroupId } of sidebarSurfaces) {
-    const id = nodeId('surface', surfaceSourceId)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'surface',
-      label: surface.label,
-      sourceId: surfaceSourceId,
-      description: surface.description,
-      icon: surface.icon,
-      enabled: true
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', parentGroupId ? nodeId('navigation-group', parentGroupId) : organizationNode.id, id),
-      kind: 'contains',
-      sourceId: parentGroupId ? nodeId('navigation-group', parentGroupId) : organizationNode.id,
-      targetId: id
-    })
-    for (const systemId of surface.targets?.systems ?? []) {
-      if (!validSystemRefs.has(systemId)) continue
 
+    if (kind === 'catalog') {
+      const catalog = record as OntologyCatalogType
+      if (catalog.appliesTo === undefined) continue
       pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('applies_to', id, systemNodeId(systemId), 'surface-system'),
+        id: edgeId('applies_to', id, ontologyGraphNodeId(catalog.appliesTo), ontologyId),
         kind: 'applies_to',
         sourceId: id,
-        targetId: systemNodeId(systemId)
+        targetId: ontologyGraphNodeId(catalog.appliesTo)
       })
     }
-  }
-
-  for (const { id: groupSourceId, node: group, parentGroupId } of sidebarGroups) {
-    const id = nodeId('navigation-group', groupSourceId)
-    pushUniqueNode(nodes, nodeIds, {
-      id,
-      kind: 'navigation-group',
-      label: group.label,
-      sourceId: groupSourceId
-    })
-    pushUniqueEdge(edges, edgeIds, {
-      id: edgeId('contains', parentGroupId ? nodeId('navigation-group', parentGroupId) : organizationNode.id, id),
-      kind: 'contains',
-      sourceId: parentGroupId ? nodeId('navigation-group', parentGroupId) : organizationNode.id,
-      targetId: id
-    })
-  }
 
-  // ---------------------------------------------------------------------------
-  // Phase 4 Wave 5: content-node graph projection
-  // ---------------------------------------------------------------------------
-  // For every system in the model tree, emit a 'content-node' graph node for
-  // each entry in system.content[*]. Edges:
-  //   - contains: system spine node → content-node
-  //   - contains: parent content-node → child content-node (via parentContentId)
-  //   - references: pipeline content-node → entity node (when data.entityId set)
-  // ---------------------------------------------------------------------------
-  for (const { path, system } of listAllSystems(organizationModel).sort((a, b) => a.path.localeCompare(b.path))) {
-    const contentMap = system.content ?? {}
-    const systemSpineId = nodeId('system', path)
-
-    for (const [localId, contentNode] of Object.entries(contentMap).sort(([a], [b]) => a.localeCompare(b))) {
-      const contentNodeGraphId = `content-node:${path}:${localId}`
-
-      pushUniqueNode(nodes, nodeIds, {
-        id: contentNodeGraphId,
-        kind: 'content-node',
-        label: contentNode.label,
-        sourceId: `${path}:${localId}`,
-        description: contentNode.description
-        // Spread contentKind and contentType into attributes; the node schema
-        // does not have custom attribute slots, so we encode them in the label
-        // suffix for now. The actual kind/type are recoverable from sourceId +
-        // the registry lookup by consumers.
-      })
-
-      // contains: system spine → content-node
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('contains', systemSpineId, contentNodeGraphId, 'system-content'),
-        kind: 'contains',
-        sourceId: systemSpineId,
-        targetId: contentNodeGraphId
-      })
-
-      // contains: parent content-node → child content-node (parentContentId chain)
-      if (contentNode.parentContentId) {
-        const parentContentNodeGraphId = `content-node:${path}:${contentNode.parentContentId}`
+    if (kind === 'group') {
+      const group = record as OntologyGroup
+      for (const memberOntologyId of group.members ?? []) {
         pushUniqueEdge(edges, edgeIds, {
-          id: edgeId('contains', parentContentNodeGraphId, contentNodeGraphId, 'content-parent'),
+          id: edgeId('contains', id, ontologyGraphNodeId(memberOntologyId), ontologyId),
           kind: 'contains',
-          sourceId: parentContentNodeGraphId,
-          targetId: contentNodeGraphId
-        })
-      }
-
-      // references: pipeline → entity (data.entityId ref-field annotation)
-      // schema:pipeline payloadSchema carries `.meta({ ref: 'entity' })` on entityId.
-      // Emit a 'references' edge from the pipeline content-node to the entity node.
-      if (
-        contentNode.kind === 'schema' &&
-        contentNode.type === 'pipeline' &&
-        contentNode.data &&
-        typeof contentNode.data['entityId'] === 'string'
-      ) {
-        const targetEntityId = nodeId('entity', contentNode.data['entityId'])
-        pushUniqueEdge(edges, edgeIds, {
-          id: edgeId('references', contentNodeGraphId, targetEntityId, 'pipeline-entity'),
-          kind: 'references',
-          sourceId: contentNodeGraphId,
-          targetId: targetEntityId,
-          label: 'applies to entity'
+          sourceId: id,
+          targetId: ontologyGraphNodeId(memberOntologyId)
         })
       }
     }
   }
-
-  // Phase 4: prospecting domain removed; read templates via migration helper.
-  // Steps are typed as BuildTemplate['steps'] which carries ProspectingBuildTemplateStepSchema fields.
-  type TemplateStep = { id: string; stageKey: string; actionKey: string; dependsOn?: string[] }
-  for (const template of getAllBuildTemplates(organizationModel).sort((a, b) => a.id.localeCompare(b.id))) {
-    const steps = template.steps as unknown as TemplateStep[]
-    const stepById = new Map(steps.map((s) => [s.id, s]))
-    for (const step of [...steps].sort((a, b) => a.id.localeCompare(b.id))) {
-      const stageNodeId = nodeId('stage', step.stageKey)
-      const actionNodeId = nodeId('action', step.actionKey)
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('uses', stageNodeId, actionNodeId, step.id),
-        kind: 'uses',
-        sourceId: stageNodeId,
-        targetId: actionNodeId
-      })
-      for (const depId of step.dependsOn ?? []) {
-        const depStep = stepById.get(depId)
-        if (depStep) {
-          const depStageNodeId = nodeId('stage', depStep.stageKey)
-          pushUniqueEdge(edges, edgeIds, {
-            id: edgeId('references', stageNodeId, depStageNodeId, step.id),
-            kind: 'references',
-            sourceId: stageNodeId,
-            targetId: depStageNodeId
-          })
-        }
-      }
-    }
-  }
-
-  if (commandViewData) {
-    const commandViewResources = collectCommandViewResources(commandViewData).sort((a, b) =>
-      a.resourceId.localeCompare(b.resourceId)
-    )
-
-    for (const resource of commandViewResources) {
-      const id = nodeId('resource', resource.resourceId)
-      const resourceNode = upsertResourceNode(nodes, nodeIds, resourceNodesById, {
-        id,
-        kind: 'resource',
-        label: resource.name,
-        sourceId: resource.resourceId,
-        description: resource.description,
-        resourceType: normalizeCommandViewResourceType(resource.type)
-      })
-
-      if (!organizationModelResourceIds.has(resource.resourceId)) {
-        pushUniqueEdge(edges, edgeIds, {
-          id: edgeId('contains', organizationNode.id, resourceNode.id),
-          kind: 'contains',
-          sourceId: organizationNode.id,
-          targetId: resourceNode.id
-        })
-      }
-    }
-
-    for (const relationship of [...commandViewData.edges].sort((a, b) => a.id.localeCompare(b.id))) {
-      const sourceNode = ensureResourceNode(nodes, nodeIds, resourceNodesById, relationship.source)
-      const targetNode = ensureResourceNode(nodes, nodeIds, resourceNodesById, relationship.target)
-
+
+  for (const role of Object.values(organizationModel.roles).sort((a, b) => a.id.localeCompare(b.id))) {
+    const id = nodeId('role', role.id)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'role',
+      label: role.title,
+      sourceId: role.id,
+      description: role.responsibilities.length > 0 ? role.responsibilities.join('; ') : undefined
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', organizationNode.id, id),
+      kind: 'contains',
+      sourceId: organizationNode.id,
+      targetId: id
+    })
+    if (role.reportsToId !== undefined) {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('references', id, nodeId('role', role.reportsToId), 'reports-to'),
+        kind: 'references',
+        sourceId: id,
+        targetId: nodeId('role', role.reportsToId),
+        label: 'reports to'
+      })
+    }
+    for (const systemId of role.responsibleFor ?? []) {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('governs', id, systemNodeId(systemId), 'responsible-for'),
+        kind: 'governs',
+        sourceId: id,
+        targetId: systemNodeId(systemId),
+        label: 'responsible for'
+      })
+    }
+  }
+
+  // Phase 4: knowledge is now Record<id, OrgKnowledgeNode> (D3); iterate Object.values.
+  for (const node of Object.values(organizationModel.knowledge).sort((a, b) => a.id.localeCompare(b.id))) {
+    const id = nodeId('knowledge', node.id)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'knowledge',
+      label: node.title,
+      sourceId: node.id,
+      description: node.summary,
+      icon: node.icon
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', organizationNode.id, id),
+      kind: 'contains',
+      sourceId: organizationNode.id,
+      targetId: id
+    })
+    for (const link of node.links) {
+      const targetId =
+        link.target.kind === 'system'
+          ? systemNodeId(link.target.id)
+          : link.target.kind === 'ontology'
+            ? ontologyGraphNodeId(link.target.id)
+            : link.nodeId
       pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('contains', organizationNode.id, sourceNode.id),
-        kind: 'contains',
-        sourceId: organizationNode.id,
-        targetId: sourceNode.id
-      })
+        id: edgeId('governs', id, targetId),
+        kind: 'governs',
+        sourceId: id,
+        targetId
+      })
+    }
+  }
+
+  // Phase 4: prospecting domain removed; read stages via migration helper.
+  const allStages = [
+    ...getAllProspectingStages(organizationModel, 'company'),
+    ...getAllProspectingStages(organizationModel, 'contact')
+  ].sort((a, b) => a.order - b.order || a.id.localeCompare(b.id))
+
+  for (const stage of allStages) {
+    const id = nodeId('stage', stage.id)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'stage',
+      label: stage.label,
+      sourceId: stage.id,
+      ...(stage.description ? { description: stage.description } : {}),
+      ...(stage.icon ? { icon: stage.icon } : {})
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', organizationNode.id, id),
+      kind: 'contains',
+      sourceId: organizationNode.id,
+      targetId: id
+    })
+  }
+
+  for (const action of Object.values(organizationModel.actions).sort((a, b) => a.id.localeCompare(b.id))) {
+    const id = nodeId('action', action.id)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'action',
+      label: action.label,
+      sourceId: action.id,
+      description: action.description
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', organizationNode.id, id),
+      kind: 'contains',
+      sourceId: organizationNode.id,
+      targetId: id
+    })
+    if (action.resourceId !== undefined) {
+      const resourceNode = ensureResourceNode(nodes, nodeIds, resourceNodesById, action.resourceId)
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('maps_to', id, resourceNode.id),
+        kind: 'maps_to',
+        sourceId: id,
+        targetId: resourceNode.id
+      })
+    }
+
+    for (const entityId of action.affects ?? []) {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('affects', id, nodeId('entity', entityId)),
+        kind: 'affects',
+        sourceId: id,
+        targetId: nodeId('entity', entityId)
+      })
+    }
+
+    for (const invocation of action.invocations) {
+      const key = invocationSignature(invocation)
+      const existing = actionIdsByInvocation.get(key)
+      if (existing) {
+        existing.push(id)
+      } else {
+        actionIdsByInvocation.set(key, [id])
+      }
+    }
+  }
+
+  for (const entity of Object.values(organizationModel.entities).sort(
+    (a, b) => a.order - b.order || a.id.localeCompare(b.id)
+  )) {
+    const id = nodeId('entity', entity.id)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'entity',
+      label: entity.label,
+      sourceId: entity.id,
+      description: entity.description
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', systemNodeId(entity.ownedBySystemId), id, 'system-entity'),
+      kind: 'contains',
+      sourceId: systemNodeId(entity.ownedBySystemId),
+      targetId: id
+    })
+
+    for (const [linkIndex, link] of (entity.links ?? []).entries()) {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('links', id, nodeId('entity', link.toEntity), `${link.kind}-${linkIndex}`),
+        kind: 'links',
+        sourceId: id,
+        targetId: nodeId('entity', link.toEntity),
+        label: link.label ?? link.kind
+      })
+    }
+
+    if (entity.stateCatalogId !== undefined) {
+      const stateEvents: EventDescriptor[] = []
+
+      // Phase 4: model.statuses removed (D1). Compatibility status data can
+      // still project from System.content; primary status-flow authoring now
+      // belongs in System.ontology catalogTypes.
+
+      if (entity.stateCatalogId === 'crm.pipeline') {
+        // Phase 4: model.sales removed (D8). Read pipelines via migration helper.
+        for (const { pipeline } of getAllPipelines(organizationModel)
+          .filter(({ pipeline: p }) => p.entityId === entity.id)
+          .sort((a, b) => a.pipeline.id.localeCompare(b.pipeline.id))) {
+          for (const stage of [...pipeline.stages].sort((a, b) => a.order - b.order || a.id.localeCompare(b.id))) {
+            stateEvents.push(buildEntityEventDescriptor(entity, stage.id, stage.label))
+          }
+        }
+      }
+
+      if (entity.stateCatalogId === 'delivery.task') {
+        // Phase 4: model.projects removed (D8). Read statuses via migration helper.
+        for (const status of getAllProjectStatuses(organizationModel, 'task').sort(
+          (a, b) => a.order - b.order || a.id.localeCompare(b.id)
+        )) {
+          stateEvents.push(buildEntityEventDescriptor(entity, status.id, status.label))
+        }
+      }
+
+      if (entity.stateCatalogId === 'lead-gen.company' || entity.stateCatalogId === 'lead-gen.contact') {
+        const leadGenEntity = entity.stateCatalogId === 'lead-gen.company' ? 'company' : 'contact'
+        for (const stage of Object.values(LEAD_GEN_STAGE_CATALOG).sort(
+          (a, b) => a.order - b.order || a.key.localeCompare(b.key)
+        )) {
+          if (stage.entity !== leadGenEntity && !(stage.additionalEntities ?? []).includes(leadGenEntity)) continue
+          stateEvents.push(buildEntityEventDescriptor(entity, stage.key, stage.label))
+        }
+      }
+
+      for (const event of stateEvents) {
+        pushEventProjection(
+          nodes,
+          nodeIds,
+          edges,
+          edgeIds,
+          projectedEventNodeIdsByEventId,
+          event,
+          id,
+          'originates_from'
+        )
+      }
+    }
+  }
+
+  for (const { path, system } of systemsWithPaths.sort((a, b) => a.path.localeCompare(b.path))) {
+    for (const actionRef of system.actions ?? []) {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('uses', nodeId('system', path), nodeId('action', actionRef.actionId), actionRef.intent),
+        kind: 'uses',
+        sourceId: nodeId('system', path),
+        targetId: nodeId('action', actionRef.actionId),
+        label: actionRef.intent
+      })
+    }
+  }
+
+  // Pre-compute the set of valid system paths so the resource loop below can
+  // skip dangling-path edge emission in O(1) per resource.  Belt-and-suspenders
+  // against the Wave 2 superRefine; reachable only for partial-OM fixture cases.
+  const validSystemPaths = new Set([...validSystemRefs])
+
+  for (const resource of Object.values(organizationModel.resources).sort((a, b) => a.id.localeCompare(b.id))) {
+    const resourceNode = upsertResourceNode(nodes, nodeIds, resourceNodesById, {
+      id: nodeId('resource', resource.id),
+      kind: 'resource',
+      label: resource.id,
+      sourceId: resource.id,
+      resourceType: normalizeOrganizationModelResourceType(resource.kind)
+    })
+
+    // Skip the contains edge if the systemPath doesn't resolve to a real system.
+    // In a fully-validated model this never fires; it guards partial-OM fixtures.
+    if (validSystemPaths.has(resource.systemPath)) {
       pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('contains', organizationNode.id, targetNode.id),
+        id: edgeId('contains', systemNodeId(resource.systemPath), resourceNode.id, 'system-resource'),
         kind: 'contains',
-        sourceId: organizationNode.id,
-        targetId: targetNode.id
-      })
-
-      pushUniqueEdge(edges, edgeIds, {
-        id: edgeId('references', sourceNode.id, targetNode.id, relationship.relationship),
-        kind: 'references',
-        sourceId: sourceNode.id,
-        targetId: targetNode.id,
-        label: relationship.relationship,
-        relationshipType: relationship.relationship
+        sourceId: systemNodeId(resource.systemPath),
+        targetId: resourceNode.id
       })
     }
-  }
 
-  const graph: OrganizationGraph = {
-    version: 1,
-    organizationModelVersion: organizationModel.version,
-    nodes,
-    edges
-  }
+    pushOntologyBindingEdges(edges, edgeIds, resourceNode.id, 'implements', resource.ontology?.implements)
+    pushOntologyBindingEdges(edges, edgeIds, resourceNode.id, 'reads', resource.ontology?.reads)
+    pushOntologyBindingEdges(edges, edgeIds, resourceNode.id, 'writes', resource.ontology?.writes)
+    pushOntologyBindingEdges(edges, edgeIds, resourceNode.id, 'uses_catalog', resource.ontology?.usesCatalogs)
+    pushOntologyBindingEdges(edges, edgeIds, resourceNode.id, 'emits', resource.ontology?.emits)
 
-  return OrganizationGraphSchema.parse(graph)
-}
+    if (resource.kind === 'workflow' || resource.kind === 'agent') {
+      for (const emission of resource.emits ?? []) {
+        pushEventProjection(
+          nodes,
+          nodeIds,
+          edges,
+          edgeIds,
+          projectedEventNodeIdsByEventId,
+          buildResourceEventDescriptor(resource.id, emission),
+          resourceNode.id,
+          'emits'
+        )
+      }
+    }
+
+    if (resource.kind === 'agent') {
+      for (const [index, invocation] of resource.invocations.entries()) {
+        const label = invocationLabel(invocation)
+        if (invocation.kind === 'script-execution') {
+          const targetNode = ensureResourceNode(nodes, nodeIds, resourceNodesById, invocation.resourceId)
+          pushUniqueEdge(edges, edgeIds, {
+            id: edgeId('uses', resourceNode.id, targetNode.id, `agent-invocation-${index}`),
+            kind: 'uses',
+            sourceId: resourceNode.id,
+            targetId: targetNode.id,
+            label
+          })
+          continue
+        }
+
+        for (const actionNodeId of actionIdsByInvocation.get(invocationSignature(invocation)) ?? []) {
+          pushUniqueEdge(edges, edgeIds, {
+            id: edgeId('references', resourceNode.id, actionNodeId, `agent-invocation-${index}`),
+            kind: 'references',
+            sourceId: resourceNode.id,
+            targetId: actionNodeId,
+            label
+          })
+        }
+      }
+    }
+  }
+
+  for (const policy of Object.values(organizationModel.policies).sort(
+    (a, b) => a.order - b.order || a.id.localeCompare(b.id)
+  )) {
+    const id = nodeId('policy', policy.id)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'policy',
+      label: policy.label,
+      sourceId: policy.id,
+      description: policy.description
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', organizationNode.id, id),
+      kind: 'contains',
+      sourceId: organizationNode.id,
+      targetId: id
+    })
+
+    for (const systemId of policy.appliesTo.systemIds) {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('applies_to', id, systemNodeId(systemId), 'system'),
+        kind: 'applies_to',
+        sourceId: id,
+        targetId: systemNodeId(systemId)
+      })
+    }
+    for (const actionId of policy.appliesTo.actionIds) {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('applies_to', id, nodeId('action', actionId), 'action'),
+        kind: 'applies_to',
+        sourceId: id,
+        targetId: nodeId('action', actionId)
+      })
+    }
+    for (const resourceId of policy.appliesTo.resourceIds) {
+      const resourceNode = ensureResourceNode(nodes, nodeIds, resourceNodesById, resourceId)
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('applies_to', id, resourceNode.id, 'resource'),
+        kind: 'applies_to',
+        sourceId: id,
+        targetId: resourceNode.id
+      })
+    }
+    for (const roleId of policy.appliesTo.roleIds) {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('applies_to', id, nodeId('role', roleId), 'role'),
+        kind: 'applies_to',
+        sourceId: id,
+        targetId: nodeId('role', roleId)
+      })
+    }
+
+    if (policy.trigger.kind === 'event') {
+      const eventNode = projectedEventNodeIdsByEventId.get(policy.trigger.eventId)
+      if (eventNode !== undefined) {
+        pushUniqueEdge(edges, edgeIds, {
+          id: edgeId('triggers', eventNode, id),
+          kind: 'triggers',
+          sourceId: eventNode,
+          targetId: id
+        })
+      }
+    } else if (policy.trigger.kind === 'action-invocation') {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('triggers', nodeId('action', policy.trigger.actionId), id),
+        kind: 'triggers',
+        sourceId: nodeId('action', policy.trigger.actionId),
+        targetId: id
+      })
+    }
+
+    for (const [effectIndex, effect] of policy.actions.entries()) {
+      if (effect.kind === 'invoke-action') {
+        pushUniqueEdge(edges, edgeIds, {
+          id: edgeId('effects', id, nodeId('action', effect.actionId), `invoke-action-${effectIndex}`),
+          kind: 'effects',
+          sourceId: id,
+          targetId: nodeId('action', effect.actionId),
+          label: 'invoke action'
+        })
+      }
+      if ((effect.kind === 'notify-role' || effect.kind === 'require-approval') && effect.roleId !== undefined) {
+        pushUniqueEdge(edges, edgeIds, {
+          id: edgeId('effects', id, nodeId('role', effect.roleId), `${effect.kind}-${effectIndex}`),
+          kind: 'effects',
+          sourceId: id,
+          targetId: nodeId('role', effect.roleId),
+          label: effect.kind
+        })
+      }
+    }
+  }
+
+  for (const segment of Object.values(organizationModel.customers).sort(
+    (a, b) => a.order - b.order || a.id.localeCompare(b.id)
+  )) {
+    const id = nodeId('customer-segment', segment.id)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'customer-segment',
+      label: segment.name,
+      sourceId: segment.id,
+      description: segment.description || undefined
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', organizationNode.id, id),
+      kind: 'contains',
+      sourceId: organizationNode.id,
+      targetId: id
+    })
+  }
+
+  for (const product of Object.values(organizationModel.offerings).sort(
+    (a, b) => a.order - b.order || a.id.localeCompare(b.id)
+  )) {
+    const id = nodeId('offering', product.id)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'offering',
+      label: product.name,
+      sourceId: product.id,
+      description: product.description || undefined
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', organizationNode.id, id),
+      kind: 'contains',
+      sourceId: organizationNode.id,
+      targetId: id
+    })
+    for (const segmentId of product.targetSegmentIds) {
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('applies_to', id, nodeId('customer-segment', segmentId), 'targets-segment'),
+        kind: 'applies_to',
+        sourceId: id,
+        targetId: nodeId('customer-segment', segmentId),
+        label: 'targets'
+      })
+    }
+  }
+
+  for (const objective of Object.values(organizationModel.goals).sort(
+    (a, b) => a.order - b.order || a.id.localeCompare(b.id)
+  )) {
+    const id = nodeId('goal', objective.id)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'goal',
+      label: objective.description,
+      sourceId: objective.id
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', organizationNode.id, id),
+      kind: 'contains',
+      sourceId: organizationNode.id,
+      targetId: id
+    })
+  }
+
+  const sidebarGroups: Array<{
+    id: string
+    node: Extract<OrganizationModelSidebarNode, { type: 'group' }>
+    parentGroupId?: string
+  }> = []
+  const sidebarSurfaces: Array<{
+    id: string
+    node: Extract<OrganizationModelSidebarNode, { type: 'surface' }>
+    parentGroupId?: string
+  }> = []
+  collectSidebarGraphNodes(organizationModel.navigation.sidebar.primary, sidebarGroups, sidebarSurfaces)
+  collectSidebarGraphNodes(organizationModel.navigation.sidebar.bottom, sidebarGroups, sidebarSurfaces)
+
+  for (const { id: surfaceSourceId, node: surface, parentGroupId } of sidebarSurfaces) {
+    const id = nodeId('surface', surfaceSourceId)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'surface',
+      label: surface.label,
+      sourceId: surfaceSourceId,
+      description: surface.description,
+      icon: surface.icon,
+      enabled: true
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', parentGroupId ? nodeId('navigation-group', parentGroupId) : organizationNode.id, id),
+      kind: 'contains',
+      sourceId: parentGroupId ? nodeId('navigation-group', parentGroupId) : organizationNode.id,
+      targetId: id
+    })
+    for (const systemId of surface.targets?.systems ?? []) {
+      if (!validSystemRefs.has(systemId)) continue
+
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('applies_to', id, systemNodeId(systemId), 'surface-system'),
+        kind: 'applies_to',
+        sourceId: id,
+        targetId: systemNodeId(systemId)
+      })
+    }
+  }
+
+  for (const { id: groupSourceId, node: group, parentGroupId } of sidebarGroups) {
+    const id = nodeId('navigation-group', groupSourceId)
+    pushUniqueNode(nodes, nodeIds, {
+      id,
+      kind: 'navigation-group',
+      label: group.label,
+      sourceId: groupSourceId
+    })
+    pushUniqueEdge(edges, edgeIds, {
+      id: edgeId('contains', parentGroupId ? nodeId('navigation-group', parentGroupId) : organizationNode.id, id),
+      kind: 'contains',
+      sourceId: parentGroupId ? nodeId('navigation-group', parentGroupId) : organizationNode.id,
+      targetId: id
+    })
+  }
+
+  // ---------------------------------------------------------------------------
+  // Compatibility bridge: content-node graph projection
+  // ---------------------------------------------------------------------------
+  // Keep bridge-era System.content addressable as read-only content-node:* graph
+  // IDs for old UI and knowledge consumers. New semantic graph consumers should
+  // prefer ontology-native graph nodes emitted from System.ontology.
+  //
+  // For every system in the model tree, emit a 'content-node' graph node for
+  // each entry in system.content[*]. Edges:
+  //   - contains: system spine node → content-node
+  //   - contains: parent content-node → child content-node (via parentContentId)
+  //   - references: pipeline content-node → entity node (when data.entityId set)
+  // ---------------------------------------------------------------------------
+  for (const { path, system } of listAllSystems(organizationModel).sort((a, b) => a.path.localeCompare(b.path))) {
+    const contentMap = system.content ?? {}
+    const systemSpineId = nodeId('system', path)
+
+    for (const [localId, contentNode] of Object.entries(contentMap).sort(([a], [b]) => a.localeCompare(b))) {
+      const contentNodeGraphId = `content-node:${path}:${localId}`
+
+      pushUniqueNode(nodes, nodeIds, {
+        id: contentNodeGraphId,
+        kind: 'content-node',
+        label: contentNode.label,
+        sourceId: `${path}:${localId}`,
+        description: contentNode.description
+        // Spread contentKind and contentType into attributes; the node schema
+        // does not have custom attribute slots, so we encode them in the label
+        // suffix for now. The actual kind/type are recoverable from sourceId +
+        // the registry lookup by consumers.
+      })
+
+      // contains: system spine → content-node
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('contains', systemSpineId, contentNodeGraphId, 'system-content'),
+        kind: 'contains',
+        sourceId: systemSpineId,
+        targetId: contentNodeGraphId
+      })
+
+      // contains: parent content-node → child content-node (parentContentId chain)
+      if (contentNode.parentContentId) {
+        const parentContentNodeGraphId = `content-node:${path}:${contentNode.parentContentId}`
+        pushUniqueEdge(edges, edgeIds, {
+          id: edgeId('contains', parentContentNodeGraphId, contentNodeGraphId, 'content-parent'),
+          kind: 'contains',
+          sourceId: parentContentNodeGraphId,
+          targetId: contentNodeGraphId
+        })
+      }
+
+      // references: pipeline -> entity (data.entityId ref-field annotation)
+      // Bridge schema:pipeline payloadSchema carries `.meta({ ref: 'entity' })` on entityId.
+      // Emit a 'references' edge from the pipeline content-node to the entity node.
+      if (
+        contentNode.kind === 'schema' &&
+        contentNode.type === 'pipeline' &&
+        contentNode.data &&
+        typeof contentNode.data['entityId'] === 'string'
+      ) {
+        const targetEntityId = nodeId('entity', contentNode.data['entityId'])
+        pushUniqueEdge(edges, edgeIds, {
+          id: edgeId('references', contentNodeGraphId, targetEntityId, 'pipeline-entity'),
+          kind: 'references',
+          sourceId: contentNodeGraphId,
+          targetId: targetEntityId,
+          label: 'applies to entity'
+        })
+      }
+    }
+  }
+
+  // Phase 4: prospecting domain removed; read templates via migration helper.
+  // Steps are typed as BuildTemplate['steps'] which carries ProspectingBuildTemplateStepSchema fields.
+  type TemplateStep = { id: string; stageKey: string; actionKey: string; dependsOn?: string[] }
+  for (const template of getAllBuildTemplates(organizationModel).sort((a, b) => a.id.localeCompare(b.id))) {
+    const steps = template.steps as unknown as TemplateStep[]
+    const stepById = new Map(steps.map((s) => [s.id, s]))
+    for (const step of [...steps].sort((a, b) => a.id.localeCompare(b.id))) {
+      const stageNodeId = nodeId('stage', step.stageKey)
+      const actionNodeId = nodeId('action', step.actionKey)
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('uses', stageNodeId, actionNodeId, step.id),
+        kind: 'uses',
+        sourceId: stageNodeId,
+        targetId: actionNodeId
+      })
+      for (const depId of step.dependsOn ?? []) {
+        const depStep = stepById.get(depId)
+        if (depStep) {
+          const depStageNodeId = nodeId('stage', depStep.stageKey)
+          pushUniqueEdge(edges, edgeIds, {
+            id: edgeId('references', stageNodeId, depStageNodeId, step.id),
+            kind: 'references',
+            sourceId: stageNodeId,
+            targetId: depStageNodeId
+          })
+        }
+      }
+    }
+  }
+
+  if (commandViewData) {
+    const commandViewResources = collectCommandViewResources(commandViewData).sort((a, b) =>
+      a.resourceId.localeCompare(b.resourceId)
+    )
+
+    for (const resource of commandViewResources) {
+      const id = nodeId('resource', resource.resourceId)
+      const resourceNode = upsertResourceNode(nodes, nodeIds, resourceNodesById, {
+        id,
+        kind: 'resource',
+        label: resource.name,
+        sourceId: resource.resourceId,
+        description: resource.description,
+        resourceType: normalizeCommandViewResourceType(resource.type)
+      })
+
+      if (!organizationModelResourceIds.has(resource.resourceId)) {
+        pushUniqueEdge(edges, edgeIds, {
+          id: edgeId('contains', organizationNode.id, resourceNode.id),
+          kind: 'contains',
+          sourceId: organizationNode.id,
+          targetId: resourceNode.id
+        })
+      }
+    }
+
+    for (const relationship of [...commandViewData.edges].sort((a, b) => a.id.localeCompare(b.id))) {
+      const sourceNode = ensureResourceNode(nodes, nodeIds, resourceNodesById, relationship.source)
+      const targetNode = ensureResourceNode(nodes, nodeIds, resourceNodesById, relationship.target)
+
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('contains', organizationNode.id, sourceNode.id),
+        kind: 'contains',
+        sourceId: organizationNode.id,
+        targetId: sourceNode.id
+      })
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('contains', organizationNode.id, targetNode.id),
+        kind: 'contains',
+        sourceId: organizationNode.id,
+        targetId: targetNode.id
+      })
+
+      pushUniqueEdge(edges, edgeIds, {
+        id: edgeId('references', sourceNode.id, targetNode.id, relationship.relationship),
+        kind: 'references',
+        sourceId: sourceNode.id,
+        targetId: targetNode.id,
+        label: relationship.relationship,
+        relationshipType: relationship.relationship
+      })
+    }
+  }
+
+  const graph: OrganizationGraph = {
+    version: 1,
+    organizationModelVersion: organizationModel.version,
+    nodes,
+    edges
+  }
+
+  return OrganizationGraphSchema.parse(graph)
+}