@djolex999/vir-cli 0.23.3 → 0.24.2

package/dist/cli/embed.js

@@ -0,0 +1,183 @@
+import { createInterface } from "node:readline/promises";
+import { stdin, stdout } from "node:process";
+import { join } from "node:path";
+import { loadConfig } from "../config.js";
+import { embedNoteWithProvider, resolveEmbeddingProvider, } from "../search/provider.js";
+import { runEmbedSetup } from "./embedSetup.js";
+import { StateDb } from "../state/db.js";
+import * as ui from "../ui/display.js";
+import { VaultWriter } from "../pipeline/writer.js";
+export async function embedCommand(opts) {
+    if (opts.setup) {
+        await runEmbedSetup(opts.yes === true);
+        return;
+    }
+    const cfg = loadConfig();
+    ui.header("embed");
+    ui.blank();
+    const provider = await resolveEmbeddingProvider(cfg.embeddingProvider);
+    if (!provider) {
+        ui.row(ui.errorColor(ui.CROSS), ui.text("no embedding provider available"));
+        ui.line(ui.dim("  vir embed --setup      # local provider, no Ollama needed (~233 MB)"));
+        ui.line(ui.dim("  or: brew install ollama && ollama pull nomic-embed-text && ollama serve"));
+        process.exitCode = 1;
+        return;
+    }
+    const provenance = provider.provenance();
+    const db = new StateDb();
+    try {
+        // Same text the writer embeds (note file minus generated sections),
+        // falling back to stored content when a file is gone.
+        const text = new VaultWriter(cfg, db).embeddingText;
+        const rows = db.listDistilled();
+        const root = join(cfg.vaultPath, cfg.outputDir);
+        const embeddedRows = [
+            ...db.getEmbeddings(root),
+            ...db.getArticleEmbeddings(),
+            ...db.getTopicEmbeddings(root, cfg.topicsDir),
+            ...db.getPdfEmbeddings(),
+        ];
+        // Crossing a model boundary is an index invalidation, not a gap fill —
+        // it needs --force AND explicit consent, with the cost stated first.
+        // Without --force, mismatched rows stay excluded from vector search
+        // (counted, reported) and only NULL-embedding gaps are filled.
+        const mismatched = embeddedRows.filter((r) => r.embeddingModel !== provider.modelName).length;
+        if (mismatched > 0 && !opts.force) {
+            ui.row(ui.warn(ui.WARN_GLYPH), ui.text(`${mismatched} note(s) are embedded under a different model than the active one (${provider.modelName})`));
+            ui.line(ui.dim("they are excluded from vector search until re-embedded"));
+            ui.line(ui.dim("run `vir embed --force` to re-embed the whole index"));
+        }
+        if (mismatched > 0 && opts.force) {
+            const estSecs = Math.max(1, Math.round(rows.length * 0.15));
+            ui.row(ui.warn(ui.WARN_GLYPH), ui.text(`model boundary: re-embedding ${rows.length} note(s) under ${provider.modelName} (~${estSecs}s), replacing vectors from other models`));
+            if (!opts.yes) {
+                const rl = createInterface({ input: stdin, output: stdout });
+                const answer = (await rl.question("Proceed? [y/N] ")).trim().toLowerCase();
+                rl.close();
+                if (answer !== "y" && answer !== "yes") {
+                    ui.line(ui.dim("aborted — index unchanged"));
+                    return;
+                }
+            }
+        }
+        const existing = new Set(db
+            .getEmbeddings(root)
+            .filter((r) => r.embeddingModel === provider.modelName)
+            .map((r) => r.sessionId));
+        const target = opts.force
+            ? rows
+            : rows.filter((r) => !existing.has(r.sessionId));
+        // Topics live in their own table, so backfill them here too — a compose
+        // while Ollama was down heals on a manual `vir embed`, not only the next
+        // `vir run` sweep. --force re-embeds all topics; otherwise just NULL ones.
+        const topicTargets = opts.force
+            ? db.listTopics().map((t) => ({ id: t.id, content: t.content }))
+            : db.listTopicEmbeddingTargets();
+        // Articles live in their own table too — back-fill them here so a clip
+        // distilled while Ollama was down heals on a manual `vir embed`, not only
+        // the next `vir run` sweep. --force re-embeds all embeddable articles
+        // (keyed by source path); otherwise just the NULL-embedding ones.
+        const articleTargets = opts.force
+            ? db.listArticles().map((a) => ({
+                path: a.path,
+                notePath: a.notePath,
+                content: a.content,
+            }))
+            : db.listArticleEmbeddingTargets();
+        // PDFs live in their own table too — same back-fill rationale as articles.
+        const pdfTargets = opts.force
+            ? db.listPdfs().map((p) => ({
+                path: p.path,
+                notePath: p.notePath,
+                content: p.content,
+            }))
+            : db.listPdfEmbeddingTargets();
+        const total = target.length +
+            topicTargets.length +
+            articleTargets.length +
+            pdfTargets.length;
+        if (total === 0) {
+            ui.row(ui.success(ui.CHECK), ui.text("all notes already embedded"));
+            return;
+        }
+        const sp = ui.spinner(`embedding notes (0/${total})`).start();
+        let embedded = 0;
+        let skipped = 0;
+        let errors = 0;
+        for (let i = 0; i < target.length; i += 1) {
+            const r = target[i];
+            if (!r)
+                continue;
+            if (r.content.trim().length === 0) {
+                skipped += 1;
+                continue;
+            }
+            const vec = await embedNoteWithProvider(provider, text.session(r.sessionId) ?? r.content);
+            if (!vec) {
+                errors += 1;
+                continue;
+            }
+            db.storeEmbedding(r.sessionId, vec, provenance);
+            embedded += 1;
+            sp.text = ui.dim(`embedding notes (${embedded}/${total})`);
+        }
+        for (const t of topicTargets) {
+            if (!t.content || t.content.trim().length === 0) {
+                skipped += 1;
+                continue;
+            }
+            const vec = await embedNoteWithProvider(provider, text.topic(t.id) ?? t.content);
+            if (!vec) {
+                errors += 1;
+                continue;
+            }
+            db.storeTopicEmbedding(t.id, vec, provenance);
+            embedded += 1;
+            sp.text = ui.dim(`embedding notes (${embedded}/${total})`);
+        }
+        for (const a of articleTargets) {
+            if (!a.content || a.content.trim().length === 0) {
+                skipped += 1;
+                continue;
+            }
+            const vec = await embedNoteWithProvider(provider, (a.notePath ? text.file(a.notePath) : null) ?? a.content);
+            if (!vec) {
+                errors += 1;
+                continue;
+            }
+            db.storeArticleEmbedding(a.path, vec, provenance);
+            embedded += 1;
+            sp.text = ui.dim(`embedding notes (${embedded}/${total})`);
+        }
+        for (const p of pdfTargets) {
+            if (!p.content || p.content.trim().length === 0) {
+                skipped += 1;
+                continue;
+            }
+            const vec = await embedNoteWithProvider(provider, (p.notePath ? text.file(p.notePath) : null) ?? p.content);
+            if (!vec) {
+                errors += 1;
+                continue;
+            }
+            db.storePdfEmbedding(p.path, vec, provenance);
+            embedded += 1;
+            sp.text = ui.dim(`embedding notes (${embedded}/${total})`);
+        }
+        sp.succeed(ui.text(`embedded ${embedded} notes`));
+        ui.blank();
+        ui.divider();
+        ui.summary({
+            embedded: { value: embedded, color: ui.success },
+            skipped: { value: skipped, color: ui.muted },
+            errors: {
+                value: errors,
+                color: errors > 0 ? ui.errorColor : ui.dim,
+            },
+        });
+        ui.divider();
+    }
+    finally {
+        db.close();
+    }
+}
+//# sourceMappingURL=embed.js.map

package/dist/cli/embed.js.map

@@ -0,0 +1 @@
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package/dist/cli/guards.js

@@ -0,0 +1,40 @@
+import confirm from "@inquirer/confirm";
+import { acquireLock, LOCK_PATH, LockHeldError, releaseLock, } from "../pipeline/lock.js";
+import * as ui from "../ui/display.js";
+// Runs a command that writes notes or the DB while holding the pipeline lock,
+// so it cannot race a daemon `vir run`. A held lock is reported and exits 1,
+// the same as `vir run` and `vir reconcile`.
+export async function withPipelineLock(fn, lockPath = LOCK_PATH) {
+    try {
+        acquireLock(lockPath);
+    }
+    catch (err) {
+        if (err instanceof LockHeldError) {
+            ui.row(ui.warn(ui.WARN_GLYPH), ui.text(err.message));
+            process.exitCode = 1;
+            return;
+        }
+        throw err;
+    }
+    try {
+        await fn();
+    }
+    finally {
+        releaseLock(lockPath);
+    }
+}
+// Gate for a paid LLM step. --yes proceeds; a terminal asks; with no terminal
+// (cron, scripts) the step is skipped with a note rather than hanging on a
+// prompt or spending without consent.
+export async function confirmPaidStep(message, opts = {}) {
+    if (opts.yes === true)
+        return true;
+    const interactive = opts.interactive ?? process.stdin.isTTY === true;
+    if (!interactive) {
+        ui.line(ui.dim(`  skipped: ${message} (pass --yes to run without a prompt)`));
+        return false;
+    }
+    const ask = opts.ask ?? ((m) => confirm({ message: m, default: true }));
+    return ask(message);
+}
+//# sourceMappingURL=guards.js.map

package/dist/cli/guards.js.map

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package/dist/cli/init.js

@@ -0,0 +1,361 @@
+import confirm from "@inquirer/confirm";
+import input from "@inquirer/input";
+import select from "@inquirer/select";
+import chalk from "chalk";
+import { existsSync, mkdirSync } from "node:fs";
+import { homedir } from "node:os";
+import { join } from "node:path";
+import { CONFIG_PATH, maskSecret, ConfigSchema, configExists, ensureVirDir, expandHome, loadConfig, saveConfig, } from "../config.js";
+import { setupNotifications } from "./notificationsSetup.js";
+import { categorizeTranscriptHead, classifyTranscript, estimateSessionCost, groupByProject, readTranscriptHead, } from "../pipeline/projects.js";
+import { promptProjectDecisions } from "./projectSelect.js";
+import { scanSessions } from "../pipeline/scanner.js";
+import { normalizeModelName } from "../pipeline/distiller.js";
+import { buildInitConfig } from "./initConfig.js";
+import { installToClaudeCode } from "../mcp/install.js";
+import * as ui from "../ui/display.js";
+export async function cmdInit() {
+    ensureVirDir();
+    const existing = configExists() ? safeLoad() : null;
+    ui.header("init");
+    ui.blank();
+    // ── vault path ──────────────────────────────────────────────────────────
+    let vaultPath = "";
+    for (;;) {
+        vaultPath = await input({
+            message: "Obsidian vault path",
+            default: existing?.vaultPath ??
+                join(homedir(), "Documents", "Obsidian", "MyVault"),
+        });
+        const expanded = expandHome(vaultPath);
+        if (existsSync(expanded))
+            break;
+        const create = await confirm({
+            message: `Vault path does not exist (${expanded}). Create it?`,
+            default: true,
+        });
+        if (create) {
+            try {
+                mkdirSync(expanded, { recursive: true });
+                break;
+            }
+            catch (err) {
+                console.error(chalk.red(`failed to create: ${err.message}`));
+            }
+        }
+    }
+    const outputDir = await input({
+        message: "Output subdir inside vault",
+        default: existing?.outputDir ?? "vir",
+    });
+    // ── claude projects dir ─────────────────────────────────────────────────
+    let claudeProjectsDir = "";
+    for (;;) {
+        claudeProjectsDir = await input({
+            message: "Claude Code projects dir",
+            default: existing?.claudeProjectsDir ?? join(homedir(), ".claude", "projects"),
+        });
+        const expanded = expandHome(claudeProjectsDir);
+        if (existsSync(expanded))
+            break;
+        console.warn(chalk.yellow("directory not found — Claude Code sessions may not exist yet"));
+        const cont = await confirm({
+            message: "continue anyway?",
+            default: false,
+        });
+        if (cont)
+            break;
+    }
+    // ── web articles (optional second input source) ─────────────────────────
+    let articlesDir = existing?.articlesDir;
+    const wantsArticles = await confirm({
+        message: "Do you save web articles to a folder (e.g. Obsidian Web Clipper)?",
+        default: existing?.articlesDir !== undefined,
+    });
+    if (wantsArticles) {
+        for (;;) {
+            articlesDir = await input({
+                message: "Articles (raw/) directory",
+                default: existing?.articlesDir ??
+                    join(homedir(), "Documents", "Obsidian", "raw"),
+            });
+            const expanded = expandHome(articlesDir);
+            if (existsSync(expanded))
+                break;
+            const create = await confirm({
+                message: `Path does not exist (${expanded}). Create it?`,
+                default: true,
+            });
+            if (create) {
+                try {
+                    mkdirSync(expanded, { recursive: true });
+                    break;
+                }
+                catch (err) {
+                    console.error(chalk.red(`failed to create: ${err.message}`));
+                }
+            }
+            else {
+                break;
+            }
+        }
+    }
+    else {
+        articlesDir = undefined;
+    }
+    // ── PDFs / papers (optional third input source) ──────────────────────────
+    let pdfsDir = existing?.pdfsDir;
+    const wantsPdfs = await confirm({
+        message: "Do you keep PDFs / papers in a folder to ingest?",
+        default: existing?.pdfsDir !== undefined,
+    });
+    if (wantsPdfs) {
+        for (;;) {
+            pdfsDir = await input({
+                message: "PDFs directory",
+                default: existing?.pdfsDir ?? join(homedir(), "Documents", "papers"),
+            });
+            const expanded = expandHome(pdfsDir);
+            if (existsSync(expanded))
+                break;
+            const create = await confirm({
+                message: `Path does not exist (${expanded}). Create it?`,
+                default: true,
+            });
+            if (create) {
+                try {
+                    mkdirSync(expanded, { recursive: true });
+                    break;
+                }
+                catch (err) {
+                    console.error(chalk.red(`failed to create: ${err.message}`));
+                }
+            }
+            else {
+                break;
+            }
+        }
+    }
+    else {
+        pdfsDir = undefined;
+    }
+    const cadenceHours = Number(await input({
+        message: "Cadence (hours)",
+        default: String(existing?.cadenceHours ?? 3),
+        validate: (v) => {
+            const n = Number(v);
+            return Number.isFinite(n) && n > 0 ? true : "must be a positive number";
+        },
+    }));
+    // ── provider picker ─────────────────────────────────────────────────────
+    const provider = (await select({
+        message: "Provider",
+        default: existing?.provider ?? "anthropic",
+        choices: [
+            {
+                name: "Anthropic    (API key — predictable per-session cost, no effect on your Claude Code limits)",
+                value: "anthropic",
+            },
+            {
+                name: "Claude Code  (subscription — free and keyless; distills consume your Claude Code usage limits)",
+                value: "claude-cli",
+            },
+            {
+                name: "Kie.ai       (~72% cheaper API, third-party proxy — you trade reliability for cost)",
+                value: "kie",
+            },
+        ],
+    }));
+    // Secret prompt discipline: mask while typing, echo only a masked
+    // confirmation (maskSecret), and NEVER render the existing key as the
+    // visible inquirer default — that prints the full secret to the terminal
+    // before a single keystroke. Empty input keeps the existing/env key.
+    const promptSecret = async (message, keep, validate) => {
+        const value = await input({
+            message: keep
+                ? `${message} (Enter keeps ${maskSecret(keep)})`
+                : message,
+            transformer: (v, { isFinal }) => isFinal ? maskSecret(v || keep || "") : "•".repeat(v.length),
+            validate: (v) => (v === "" && keep ? true : validate(v)),
+        });
+        return value === "" && keep ? keep : value;
+    };
+    let anthropicApiKey;
+    let kieApiKey;
+    if (provider === "anthropic") {
+        anthropicApiKey = await promptSecret("Anthropic API key", existing?.anthropicApiKey ?? process.env.ANTHROPIC_API_KEY ?? undefined, (v) => (v.startsWith("sk-ant-") ? true : "key should start with sk-ant-"));
+    }
+    else if (provider === "kie") {
+        kieApiKey = await promptSecret("Kie.ai API key", existing?.kieApiKey ?? process.env.KIE_API_KEY ?? undefined, (v) => (v.length > 10 ? true : "enter a valid Kie.ai API key"));
+    }
+    // claude-cli: no credential of any kind — it uses the `claude` login.
+    // ── model pickers (provider-aware) ──────────────────────────────────────
+    // claude-cli accepts the same full Anthropic model ids (and pins them per
+    // invocation via --model), so it shares the anthropic id set.
+    const classifyChoices = provider !== "kie"
+        ? [
+            {
+                name: "claude-haiku-4-5-20251001  (recommended)",
+                value: "claude-haiku-4-5-20251001",
+            },
+            { name: "claude-sonnet-4-6", value: "claude-sonnet-4-6" },
+        ]
+        : [
+            {
+                name: "claude-haiku-4-5  (recommended)",
+                value: "claude-haiku-4-5",
+            },
+            { name: "claude-sonnet-4-6", value: "claude-sonnet-4-6" },
+        ];
+    const classifyModel = await select({
+        message: "Classify model (fast pass)",
+        choices: classifyChoices,
+    });
+    const distillChoices = provider !== "kie"
+        ? [
+            {
+                name: "claude-sonnet-5  (recommended)",
+                value: "claude-sonnet-5",
+            },
+            { name: "claude-sonnet-4-6", value: "claude-sonnet-4-6" },
+            {
+                name: "claude-haiku-4-5-20251001  (faster, cheaper)",
+                value: "claude-haiku-4-5-20251001",
+            },
+        ]
+        : [
+            {
+                name: "claude-sonnet-4-6  (recommended)",
+                value: "claude-sonnet-4-6",
+            },
+            {
+                name: "claude-haiku-4-5  (faster, cheaper)",
+                value: "claude-haiku-4-5",
+            },
+        ];
+    const distillModel = await select({
+        message: "Distill model (deep extraction)",
+        choices: distillChoices,
+    });
+    const filterThreshold = Number(await input({
+        message: "Filter threshold (0..1)",
+        default: String(existing?.filterThreshold ?? 0.4),
+        validate: (v) => {
+            const n = Number(v);
+            return Number.isFinite(n) && n >= 0 && n <= 1
+                ? true
+                : "must be between 0 and 1";
+        },
+    }));
+    // ── project triage (the primary decision point) ─────────────────────────
+    // Every project found under the Claude projects dir is shown once with its
+    // session count and rough cost; selected = include, unselected = exclude.
+    // Projects that appear later start undecided and trigger the run prompt.
+    let projectDecisions = {};
+    let agentTranscriptsAnswer;
+    try {
+        const projectsDirX = expandHome(claudeProjectsDir);
+        const allFound = scanSessions(projectsDirX);
+        // Triage counts + the agent-transcript question. Only top-level
+        // transcripts count (nested workflow/sidechain have their own filter),
+        // and agent transcripts are excluded from the per-project multi-select
+        // numbers so the costs shown reflect what would actually distill.
+        const topLevel = allFound.filter((s) => classifyTranscript(s.path, projectsDirX) === "session");
+        const counts = { interactive: 0, agent: 0, stub: 0 };
+        const agentPaths = new Set();
+        for (const s of topLevel) {
+            const cat = categorizeTranscriptHead(readTranscriptHead(s.path), s.size);
+            counts[cat] += 1;
+            if (cat === "agent")
+                agentPaths.add(s.path);
+        }
+        if (counts.agent > 0) {
+            ui.blank();
+            ui.line(ui.dim(`  ${counts.interactive} interactive · ${counts.agent} SDK-launched · ${counts.stub} stubs`));
+            agentTranscriptsAnswer = (await select({
+                message: "SDK-launched agent transcripts (review/verify harness output) — distill them?",
+                default: existing?.agentTranscripts ?? "exclude",
+                choices: [
+                    {
+                        name: "Exclude  (recommended — agent-internal execution, not your decisions)",
+                        value: "exclude",
+                    },
+                    { name: "Include  (distill them like any session)", value: "include" },
+                ],
+            }));
+        }
+        const found = agentTranscriptsAnswer !== "include"
+            ? topLevel.filter((s) => !agentPaths.has(s.path))
+            : topLevel;
+        const groups = [...groupByProject(found, projectsDirX).values()];
+        if (groups.length > 0) {
+            const classifyId = normalizeModelName(classifyModel, provider);
+            const distillId = normalizeModelName(distillModel, provider);
+            const infos = groups
+                .map((g) => ({
+                name: g.name,
+                sessionCount: g.sessions.length,
+                totalBytes: g.totalBytes,
+                estCost: g.sessions.reduce((sum, s) => sum +
+                    estimateSessionCost(provider, classifyId, distillId, s.size), 0),
+            }))
+                .sort((a, b) => b.estCost - a.estCost);
+            ui.blank();
+            ui.line(ui.dim("  Which projects should vir distill? Costs are rough upper bounds."));
+            projectDecisions = await promptProjectDecisions(infos, existing?.projects ?? {}, "Projects to track");
+        }
+    }
+    catch (err) {
+        console.warn(chalk.yellow(`project scan failed (${err.message}) — you can decide later with vir projects`));
+    }
+    const parsed = ConfigSchema.safeParse(buildInitConfig(existing, {
+        vaultPath,
+        outputDir,
+        claudeProjectsDir,
+        cadenceHours,
+        provider,
+        anthropicApiKey,
+        kieApiKey,
+        filterThreshold,
+        articlesDir,
+        pdfsDir,
+        classifyModel,
+        distillModel,
+        projects: projectDecisions,
+        agentTranscripts: agentTranscriptsAnswer,
+    }));
+    if (!parsed.success) {
+        console.error(chalk.red("invalid config:"));
+        for (const issue of parsed.error.issues) {
+            console.error(`  - ${issue.path.join(".")}: ${issue.message}`);
+        }
+        process.exitCode = 1;
+        return;
+    }
+    saveConfig(parsed.data);
+    ui.blank();
+    ui.row(ui.success(ui.CHECK), ui.text(`saved ${CONFIG_PATH}`));
+    ui.blank();
+    const wantsMcp = await confirm({
+        message: "Register Vir with Claude Code now? (recommended)",
+        default: true,
+    });
+    if (wantsMcp) {
+        await installToClaudeCode("user");
+    }
+    if (process.platform === "darwin" && parsed.data.notifications) {
+        ui.blank();
+        setupNotifications({ test: false });
+    }
+    ui.blank();
+    ui.line(ui.dim("next: `vir run` to test once, then `vir schedule install`"));
+}
+function safeLoad() {
+    try {
+        return loadConfig();
+    }
+    catch {
+        return null;
+    }
+}
+//# sourceMappingURL=init.js.map

package/dist/cli/init.js.map

@@ -0,0 +1 @@
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