@datagrok/bio 2.22.6 → 2.22.8

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Files changed (24) hide show
  1. package/.eslintrc.json +1 -0
  2. package/detectors.js +3 -2
  3. package/dist/package-test.js +5 -5
  4. package/dist/package-test.js.map +1 -1
  5. package/dist/package.js +4 -4
  6. package/dist/package.js.map +1 -1
  7. package/package.json +2 -2
  8. package/src/demo/bio01b-hierarchical-clustering-and-activity-cliffs.ts +3 -3
  9. package/src/demo/bio03-atomic-level.ts +3 -3
  10. package/src/demo/bio05-helm-msa-sequence-space.ts +2 -2
  11. package/src/demo/utils.ts +2 -2
  12. package/src/package-api.ts +5 -8
  13. package/src/package.g.ts +628 -0
  14. package/src/package.ts +1120 -1051
  15. package/src/tests/renderers-test.ts +1 -1
  16. package/src/utils/cell-renderer.ts +2 -0
  17. package/src/utils/monomer-lib/monomer-lib-base.ts +17 -4
  18. package/src/utils/monomer-lib/monomer-lib.ts +7 -7
  19. package/src/utils/monomer-lib/monomer-manager/duplicate-monomer-manager.ts +48 -1
  20. package/src/utils/monomer-lib/monomer-manager/monomer-manager.ts +84 -85
  21. package/src/viewers/web-logo-viewer.ts +2 -2
  22. package/src/widgets/to-atomic-level-widget.ts +3 -3
  23. package/test-console-output-1.log +648 -651
  24. package/test-record-1.mp4 +0 -0
package/.eslintrc.json CHANGED
@@ -30,6 +30,7 @@
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  "valid-jsdoc": "off",
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  "spaced-comment": "off",
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  "linebreak-style": "off",
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+ "quote-props": "off",
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  "curly": [
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  "error",
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  "multi-or-nest"
package/detectors.js CHANGED
@@ -12,6 +12,7 @@
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  * TODO: Use detectors from WebLogo pickUp.. methods
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  */
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  // eslint-disable-next-line max-lines
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+ /// <reference path="../../globals.d.ts" />
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  const SEQ_SAMPLE_LIMIT = 100;
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  const SEQ_SAMPLE_LENGTH_LIMIT = 100;
@@ -626,8 +627,8 @@ class BioPackageDetectors extends DG.Package {
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  return true;
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  }
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- if (event.args.item && event.args.item instanceof DG.GridColumn && event.args.item.column &&
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- event.args.item.column.type === DG.TYPE.STRING && !event.args.item.column.semType) {
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+ if (event.args.item && event.args.item instanceof DG.GridColumn && event.args.item.column && // there might be cases where PDS sequences with spaces are detected as text
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+ event.args.item.column.type === DG.TYPE.STRING && (!event.args.item.column.semType || event.args.item.column.semType === DG.SEMTYPE.TEXT)) {
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  const contextMenu = event.args.menu;
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  const column = event.args.item.column;
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  try {