@datagrok-libraries/bio 4.4.7 → 5.1.0

package/index.d.ts

@@ -0,0 +1,16 @@
+import { AminoacidsPalettes } from './src/aminoacids';
+import { NucleotidesPalettes } from './src/nucleotides';
+import { SeqPalette, SeqPaletteBase } from './src/seq-palettes';
+import { UnknownSeqPalettes } from './src/unknown';
+import { DrawStyle, printLeftOrCentered } from './src/utils/cell-renderer';
+import { FastaFileHandler } from './src/utils/fasta-handler';
+import { getSplitter, splitterAsFasta, getSplitterForColumn, SplitterFunc, monomerToShort, splitterAsHelm, getStats, pickUpPalette, getPaletteByType, getAlphabetSimilarity, ALPHABET, NOTATION, TAGS } from './src/utils/macromolecule';
+import { NotationConverter } from './src/utils/notation-converter';
+import { splitAlignedSequences } from './src/utils/splitter';
+import { UnitsHandler } from './src/utils/units-handler';
+import { VdRegion, VdRegionType } from './src/vd-regions';
+import { IPhylocanvasGlViewer } from './src/viewers/phylocanvas-gl-viewer';
+import { IVdRegionsViewer } from './src/viewers/vd-regions-viewer';
+import { PositionInfo, PositionMonomerInfo, WebLogo } from './src/viewers/web-logo';
+export { ALPHABET, NOTATION, TAGS, NotationConverter, SplitterFunc, getStats, getAlphabetSimilarity, getSplitter, splitterAsFasta, splitterAsHelm, getSplitterForColumn, monomerToShort, splitAlignedSequences, SeqPalette, SeqPaletteBase, AminoacidsPalettes, NucleotidesPalettes, UnknownSeqPalettes, pickUpPalette, getPaletteByType, PositionInfo, PositionMonomerInfo, WebLogo, UnitsHandler, DrawStyle, printLeftOrCentered, FastaFileHandler, VdRegionType, VdRegion, IVdRegionsViewer, IPhylocanvasGlViewer, };
+//# sourceMappingURL=index.d.ts.map

package/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAC,kBAAkB,EAAC,MAAM,kBAAkB,CAAC;AACpD,OAAO,EAAC,mBAAmB,EAAC,MAAM,mBAAmB,CAAC;AACtD,OAAO,EAAC,UAAU,EAAE,cAAc,EAAC,MAAM,oBAAoB,CAAC;AAC9D,OAAO,EAAC,kBAAkB,EAAC,MAAM,eAAe,CAAC;AACjD,OAAO,EAAC,SAAS,EAAE,mBAAmB,EAAC,MAAM,2BAA2B,CAAC;AACzE,OAAO,EAAC,gBAAgB,EAAC,MAAM,2BAA2B,CAAC;AAC3D,OAAO,EACL,WAAW,EACX,eAAe,EACf,oBAAoB,EACpB,YAAY,EACZ,cAAc,EACd,cAAc,EACd,QAAQ,EACR,aAAa,EACb,gBAAgB,EAChB,qBAAqB,EACrB,QAAQ,EACR,QAAQ,EACR,IAAI,EACL,MAAM,2BAA2B,CAAC;AACnC,OAAO,EAAC,iBAAiB,EAAC,MAAM,gCAAgC,CAAC;AACjE,OAAO,EAAC,qBAAqB,EAAC,MAAM,sBAAsB,CAAC;AAC3D,OAAO,EAAC,YAAY,EAAC,MAAM,2BAA2B,CAAC;AACvD,OAAO,EAAC,QAAQ,EAAE,YAAY,EAAC,MAAM,kBAAkB,CAAC;AACxD,OAAO,EAAC,oBAAoB,EAAC,MAAM,qCAAqC,CAAC;AACzE,OAAO,EAAC,gBAAgB,EAAC,MAAM,iCAAiC,CAAC;AACjE,OAAO,EAAC,YAAY,EAAE,mBAAmB,EAAE,OAAO,EAAC,MAAM,wBAAwB,CAAC;AAElF,OAAO,EACL,QAAQ,EACR,QAAQ,EACR,IAAI,EACJ,iBAAiB,EACjB,YAAY,EACZ,QAAQ,EACR,qBAAqB,EACrB,WAAW,EACX,eAAe,EACf,cAAc,EACd,oBAAoB,EACpB,cAAc,EACd,qBAAqB,EACrB,UAAU,EACV,cAAc,EACd,kBAAkB,EAClB,mBAAmB,EACnB,kBAAkB,EAClB,aAAa,EACb,gBAAgB,EAChB,YAAY,EACZ,mBAAmB,EACnB,OAAO,EACP,YAAY,EACZ,SAAS,EACT,mBAAmB,EACnB,gBAAgB,EAChB,YAAY,EACZ,QAAQ,EACR,gBAAgB,EAChB,oBAAoB,GACrB,CAAC"}

package/index.js

@@ -0,0 +1,14 @@
+import { AminoacidsPalettes } from './src/aminoacids';
+import { NucleotidesPalettes } from './src/nucleotides';
+import { SeqPaletteBase } from './src/seq-palettes';
+import { UnknownSeqPalettes } from './src/unknown';
+import { DrawStyle, printLeftOrCentered } from './src/utils/cell-renderer';
+import { FastaFileHandler } from './src/utils/fasta-handler';
+import { getSplitter, splitterAsFasta, getSplitterForColumn, monomerToShort, splitterAsHelm, getStats, pickUpPalette, getPaletteByType, getAlphabetSimilarity } from './src/utils/macromolecule';
+import { NotationConverter } from './src/utils/notation-converter';
+import { splitAlignedSequences } from './src/utils/splitter';
+import { UnitsHandler } from './src/utils/units-handler';
+import { VdRegion, VdRegionType } from './src/vd-regions';
+import { PositionInfo, PositionMonomerInfo, WebLogo } from './src/viewers/web-logo';
+export { NotationConverter, getStats, getAlphabetSimilarity, getSplitter, splitterAsFasta, splitterAsHelm, getSplitterForColumn, monomerToShort, splitAlignedSequences, SeqPaletteBase, AminoacidsPalettes, NucleotidesPalettes, UnknownSeqPalettes, pickUpPalette, getPaletteByType, PositionInfo, PositionMonomerInfo, WebLogo, UnitsHandler, DrawStyle, printLeftOrCentered, FastaFileHandler, VdRegionType, VdRegion, };
+//# sourceMappingURL=data:application/json;base64,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

package/index.ts

@@ -0,0 +1,62 @@
+import {AminoacidsPalettes} from './src/aminoacids';
+import {NucleotidesPalettes} from './src/nucleotides';
+import {SeqPalette, SeqPaletteBase} from './src/seq-palettes';
+import {UnknownSeqPalettes} from './src/unknown';
+import {DrawStyle, printLeftOrCentered} from './src/utils/cell-renderer';
+import {FastaFileHandler} from './src/utils/fasta-handler';
+import {
+  getSplitter,
+  splitterAsFasta,
+  getSplitterForColumn,
+  SplitterFunc,
+  monomerToShort,
+  splitterAsHelm,
+  getStats,
+  pickUpPalette,
+  getPaletteByType,
+  getAlphabetSimilarity,
+  ALPHABET,
+  NOTATION,
+  TAGS
+} from './src/utils/macromolecule';
+import {NotationConverter} from './src/utils/notation-converter';
+import {splitAlignedSequences} from './src/utils/splitter';
+import {UnitsHandler} from './src/utils/units-handler';
+import {VdRegion, VdRegionType} from './src/vd-regions';
+import {IPhylocanvasGlViewer} from './src/viewers/phylocanvas-gl-viewer';
+import {IVdRegionsViewer} from './src/viewers/vd-regions-viewer';
+import {PositionInfo, PositionMonomerInfo, WebLogo} from './src/viewers/web-logo';
+
+export {
+  ALPHABET,
+  NOTATION,
+  TAGS,
+  NotationConverter,
+  SplitterFunc,
+  getStats,
+  getAlphabetSimilarity,
+  getSplitter,
+  splitterAsFasta,
+  splitterAsHelm,
+  getSplitterForColumn,
+  monomerToShort,
+  splitAlignedSequences,
+  SeqPalette,
+  SeqPaletteBase,
+  AminoacidsPalettes,
+  NucleotidesPalettes,
+  UnknownSeqPalettes,
+  pickUpPalette,
+  getPaletteByType,
+  PositionInfo,
+  PositionMonomerInfo,
+  WebLogo,
+  UnitsHandler,
+  DrawStyle,
+  printLeftOrCentered,
+  FastaFileHandler,
+  VdRegionType,
+  VdRegion,
+  IVdRegionsViewer,
+  IPhylocanvasGlViewer,
+};

package/package.json

@@ -4,7 +4,7 @@
     "access": "public"
   },
   "friendlyName": "Datagrok bio library",
-  "version": "4.4.7",
+  "version": "5.1.0",
   "description": "",
   "dependencies": {
     "@datagrok-libraries/utils": "^1.10.1",

package/src/utils/cell-renderer.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"cell-renderer.d.ts","sourceRoot":"","sources":["cell-renderer.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAQtC,oBAAY,SAAS;IACnB,GAAG,QAAQ;IACX,OAAO,YAAY;CACpB;AAED;;;;;;;;;;;;;;;;;;;;;;GAsBG;AACH,wBAAgB,mBAAmB,CACjC,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAC1C,CAAC,EAAE,wBAAwB,EAAE,CAAC,EAAE,MAAM,EAAE,KAAK,GAAE,MAAuB,EACtE,KAAK,GAAE,MAAU,EAAE,IAAI,UAAQ,EAAE,gBAAgB,GAAE,MAAY,EAC/D,SAAS,GAAE,MAAW,EAAE,IAAI,GAAE,OAAe,EAAE,SAAS,GAAE,SAA6B,EAAE,OAAO,GAAE;IAAE,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,CAAA;CAAO,EAAE,OAAO,GAAE,MAAU,EAAE,QAAQ,GAAE,EAAE,CAAC,QAAQ,GAAG,IAAW,EAAE,iBAAiB,GAAE,MAAM,EAAO,EAAE,kBAAkB,GAAE,MAAM,GAAG,IAAW,GAAG,MAAM,CA0DlR"}
+{"version":3,"file":"cell-renderer.d.ts","sourceRoot":"","sources":["cell-renderer.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAStC,oBAAY,SAAS;IACnB,GAAG,QAAQ;IACX,OAAO,YAAY;CACpB;AAED;;;;;;;;;;;;;;;;;;;;;;GAsBG;AACH,wBAAgB,mBAAmB,CACjC,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAC1C,CAAC,EAAE,wBAAwB,EAAE,CAAC,EAAE,MAAM,EAAE,KAAK,GAAE,MAAuB,EACtE,KAAK,GAAE,MAAU,EAAE,IAAI,UAAQ,EAAE,gBAAgB,GAAE,MAAY,EAC/D,SAAS,GAAE,MAAW,EAAE,IAAI,GAAE,OAAe,EAAE,SAAS,GAAE,SAA6B,EAAE,OAAO,GAAE;IAAE,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,CAAA;CAAO,EAAE,OAAO,GAAE,MAAU,EAAE,QAAQ,GAAE,EAAE,CAAC,QAAQ,GAAG,IAAW,EAAE,iBAAiB,GAAE,MAAM,EAAO,EAAE,kBAAkB,GAAE,MAAM,GAAG,IAAW,GAAG,MAAM,CA0DlR"}

package/src/utils/cell-renderer.js

@@ -1,8 +1,8 @@
-import { WebLogo } from '../viewers/web-logo';
+import { monomerToShort } from './macromolecule';
 const undefinedColor = 'rgb(100,100,100)';
 const grayColor = '#808080';
 const blackColor = 'rgb(0,0,0)';
-const monomerToShortFunction = WebLogo.monomerToShort;
+const monomerToShortFunction = monomerToShort;
 export var DrawStyle;
 (function (DrawStyle) {
     DrawStyle["MSA"] = "MSA";
@@ -86,4 +86,4 @@ export function printLeftOrCentered(x, y, w, h, g, s, color = undefinedColor, pi
         return x + dx + maxColorTextSize;
     }
 }
-//# sourceMappingURL=data:application/json;base64,{"version":3,"file":"cell-renderer.js","sourceRoot":"","sources":["cell-renderer.ts"],"names":[],"mappings":"AACA,OAAO,EAAe,OAAO,EAAC,MAAM,qBAAqB,CAAC;AAE1D,MAAM,cAAc,GAAG,kBAAkB,CAAC;AAC1C,MAAM,SAAS,GAAG,SAAS,CAAC;AAC5B,MAAM,UAAU,GAAG,YAAY,CAAC;AAChC,MAAM,sBAAsB,GAA0D,OAAO,CAAC,cAAc,CAAC;AAE7G,MAAM,CAAN,IAAY,SAGX;AAHD,WAAY,SAAS;IACnB,wBAAW,CAAA;IACX,gCAAmB,CAAA;AACrB,CAAC,EAHW,SAAS,KAAT,SAAS,QAGpB;AAED;;;;;;;;;;;;;;;;;;;;;;GAsBG;AACH,MAAM,UAAU,mBAAmB,CACjC,CAAS,EAAE,CAAS,EAAE,CAAS,EAAE,CAAS,EAC1C,CAA2B,EAAE,CAAS,EAAE,QAAgB,cAAc,EACtE,QAAgB,CAAC,EAAE,IAAI,GAAG,KAAK,EAAE,mBAA2B,GAAG,EAC/D,YAAoB,EAAE,EAAE,OAAgB,KAAK,EAAE,YAAuB,SAAS,CAAC,OAAO,EAAE,UAAuC,EAAE,EAAE,UAAkB,CAAC,EAAE,WAA+B,IAAI,EAAE,oBAA8B,EAAE,EAAE,qBAAoC,IAAI;;IACxQ,CAAC,CAAC,SAAS,GAAG,OAAO,CAAC;IACtB,IAAI,SAAS,GAAG,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;IAC/B,IAAI,QAAQ,GAAG,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,SAAS,CAAC;IACrC,IAAI,SAAS,KAAK,SAAS,CAAC,GAAG,EAAE;QAC/B,QAAQ,GAAG,EAAE,CAAC;KACf;IACD,IAAI,SAAS,GAAG,IAAI,CAAC;IACrB,IAAI,kBAAkB,GAAG,IAAI,CAAC;IAC9B,IAAI,QAAQ,IAAI,IAAI,EAAE;QACpB,SAAS,GAAG,CAAC,CAAA,MAAA,QAAQ,CAAC,IAAI,CAAC,MAAM,0CAAE,IAAI,CAAC,YAAY,CAAC,KAAI,IAAI,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;QAChH,kBAAkB,GAAG,CAAC,CAAA,MAAA,QAAQ,CAAC,IAAI,CAAC,MAAM,0CAAE,IAAI,CAAC,sBAAsB,CAAC,KAAI,IAAI,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,sBAAsB,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;KAC9I;IACD,MAAM,cAAc,GAAW,iBAAiB,CAAC,OAAO,CAAC,CAAC;IAC1D,IAAI,kBAAkB,IAAI,CAAC,iBAAiB,CAAC,MAAM,GAAG,CAAC,CAAC,EAAE;QACxD,gBAAgB,GAAG,CAAC,SAAS,IAAI,cAAc,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,gBAAgB,CAAC;KAC3E;IACD,IAAI,kBAAkB,IAAI,IAAI,EAAE;QAC9B,SAAS,GAAG,sBAAsB,CAAC,SAAS,EAAE,kBAAkB,CAAC,CAAC;KACnE;IAGD,IAAI,QAAQ,GAAQ,CAAC,CAAC,WAAW,CAAC,SAAS,GAAG,QAAQ,CAAC,CAAC;IACxD,MAAM,MAAM,GAAG,CAAC,CAAC;IAEjB,IAAI,gBAAgB,GAAG,CAAC,CAAC,WAAW,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC;IACtD,IAAI,aAAa,GAAG,CAAC,CAAC,WAAW,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC;IACnD,MAAM,EAAE,GAAG,CAAC,QAAQ,CAAC,qBAAqB,GAAG,QAAQ,CAAC,sBAAsB,CAAC,GAAG,CAAC,CAAC;IAClF,QAAQ,GAAG,QAAQ,CAAC,KAAK,CAAC;IAC1B,IAAI,SAAS,KAAK,SAAS,CAAC,GAAG,EAAE;QAC/B,gBAAgB,GAAG,OAAO,CAAC,OAAO,CAAC,CAAC;QACpC,QAAQ,GAAG,OAAO,CAAC,OAAO,CAAC,CAAC;KAC7B;IAED,SAAS,IAAI,CAAC,GAAW,EAAE,GAAW;QACpC,MAAM,SAAS,GAAG,SAAS,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,UAAU,CAAC;QACjD,CAAC,CAAC,SAAS,GAAG,SAAS,CAAC;QACxB,CAAC,CAAC,WAAW,GAAG,gBAAgB,CAAC;QACjC,IAAI,SAAS,KAAK,SAAS,CAAC,OAAO,EAAE;YACnC,CAAC,CAAC,QAAQ,CAAC,SAAS,EAAE,CAAC,GAAG,GAAG,EAAE,CAAC,GAAG,EAAE,CAAC,CAAC;YACvC,CAAC,CAAC,SAAS,GAAG,SAAS,CAAC;YACxB,CAAC,CAAC,QAAQ,CAAC,QAAQ,EAAE,CAAC,GAAG,GAAG,EAAE,CAAC,GAAG,EAAE,CAAC,CAAC;SACvC;QACD,IAAI,SAAS,KAAK,SAAS,CAAC,GAAG,EAAE;YAC/B,CAAC,CAAC,SAAS,GAAG,SAAS,CAAC;YACxB,CAAC,CAAC,QAAQ,CAAC,SAAS,EAAE,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,OAAO,CAAC,OAAO,CAAC,GAAG,aAAa,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC,GAAG,EAAE,CAAC,CAAC;SACnF;IACH,CAAC;IAED,IAAI,IAAI,IAAI,QAAQ,GAAG,CAAC,EAAE;QACxB,IAAI,CAAC,MAAM,EAAE,MAAM,GAAG,gBAAgB,CAAC,CAAC;QACxC,OAAO,CAAC,GAAG,gBAAgB,GAAG,CAAC,CAAC,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,CAAC;KAE7D;SAAM;QACL,MAAM,EAAE,GAAG,CAAC,CAAC,GAAG,QAAQ,CAAC,GAAG,CAAC,CAAC;QAC9B,IAAI,CAAC,EAAE,EAAE,EAAE,GAAG,gBAAgB,CAAC,CAAC;QAChC,OAAO,CAAC,GAAG,EAAE,GAAG,gBAAgB,CAAC;KAClC;AACH,CAAC","sourcesContent":["import * as DG from 'datagrok-api/dg';\nimport {SplitterFunc, WebLogo} from '../viewers/web-logo';\n\nconst undefinedColor = 'rgb(100,100,100)';\nconst grayColor = '#808080';\nconst blackColor = 'rgb(0,0,0)';\nconst monomerToShortFunction: (amino: string, maxLengthOfMonomer: number) => string = WebLogo.monomerToShort;\n\nexport enum DrawStyle {\n  MSA = 'MSA',\n  classic = 'classic',\n}\n\n/**\n * A function that prints a string aligned to left or centered.\n *\n * @param {number} x x coordinate.\n * @param {number} y y coordinate.\n * @param {number} w Width.\n * @param {number} h Height.\n * @param {CanvasRenderingContext2D} g Canvas rendering context.\n * @param {string} s String to print.\n * @param {string} [color=undefinedColor] String color.\n * @param {number} [pivot=0] Pirvot.\n * @param {boolean} [left=false] Is left aligned.\n * @param {number} [transparencyRate=0.0] Transparency rate where 1.0 is fully transparent\n * @param {string} [separator=''] Is separator for sequence.\n * @param {boolean} [last=false] Is checker if element last or not.\n * @param drawStyle Is draw style. MSA - for multicharSeq, classic - for other seq.\n * @param maxWord Is array of max words for each line.\n * @param wordIdx Is index of word we currently draw.\n * @param gridCell Is grid cell.\n * @param referenceSequence Is reference sequence for diff mode.\n * @param maxLengthOfMonomer Is max length of monomer.\n * @return {number} x coordinate to start printing at.\n */\nexport function printLeftOrCentered(\n  x: number, y: number, w: number, h: number,\n  g: CanvasRenderingContext2D, s: string, color: string = undefinedColor,\n  pivot: number = 0, left = false, transparencyRate: number = 1.0,\n  separator: string = '', last: boolean = false, drawStyle: DrawStyle = DrawStyle.classic, maxWord: { [index: string]: number } = {}, wordIdx: number = 0, gridCell: DG.GridCell | null = null, referenceSequence: string[] = [], maxLengthOfMonomer: number | null = null): number {\n  g.textAlign = 'start';\n  let colorPart = s.substring(0);\n  let grayPart = last ? '' : separator;\n  if (drawStyle === DrawStyle.MSA) {\n    grayPart = '';\n  }\n  let colorCode = true;\n  let compareWithCurrent = true;\n  if (gridCell != null) {\n    colorCode = (gridCell.cell.column?.temp['color-code'] != null) ? gridCell.cell.column.temp['color-code'] : true;\n    compareWithCurrent = (gridCell.cell.column?.temp['compare-with-current'] != null) ? gridCell.cell.column.temp['compare-with-current'] : true;\n  }\n  const currentMonomer: string = referenceSequence[wordIdx];\n  if (compareWithCurrent && (referenceSequence.length > 0)) {\n    transparencyRate = (colorPart == currentMonomer) ? 0.3 : transparencyRate;\n  }\n  if (maxLengthOfMonomer != null) {\n    colorPart = monomerToShortFunction(colorPart, maxLengthOfMonomer);\n  }\n\n\n  let textSize: any = g.measureText(colorPart + grayPart);\n  const indent = 5;\n\n  let maxColorTextSize = g.measureText(colorPart).width;\n  let colorTextSize = g.measureText(colorPart).width;\n  const dy = (textSize.fontBoundingBoxAscent + textSize.fontBoundingBoxDescent) / 2;\n  textSize = textSize.width;\n  if (drawStyle === DrawStyle.MSA) {\n    maxColorTextSize = maxWord[wordIdx];\n    textSize = maxWord[wordIdx];\n  }\n\n  function draw(dx1: number, dx2: number): void {\n    const drawColor = colorCode ? color : blackColor;\n    g.fillStyle = drawColor;\n    g.globalAlpha = transparencyRate;\n    if (drawStyle === DrawStyle.classic) {\n      g.fillText(colorPart, x + dx1, y + dy);\n      g.fillStyle = grayColor;\n      g.fillText(grayPart, x + dx2, y + dy);\n    }\n    if (drawStyle === DrawStyle.MSA) {\n      g.fillStyle = drawColor;\n      g.fillText(colorPart, x + dx1 + ((maxWord[wordIdx] - colorTextSize) / 2), y + dy);\n    }\n  }\n\n  if (left || textSize > w) {\n    draw(indent, indent + maxColorTextSize);\n    return x + maxColorTextSize + g.measureText(grayPart).width;\n\n  } else {\n    const dx = (w - textSize) / 2;\n    draw(dx, dx + maxColorTextSize);\n    return x + dx + maxColorTextSize;\n  }\n}\n\n"]}
+//# sourceMappingURL=data:application/json;base64,{"version":3,"file":"cell-renderer.js","sourceRoot":"","sources":["cell-renderer.ts"],"names":[],"mappings":"AAEA,OAAO,EAAC,cAAc,EAAC,MAAM,iBAAiB,CAAC;AAE/C,MAAM,cAAc,GAAG,kBAAkB,CAAC;AAC1C,MAAM,SAAS,GAAG,SAAS,CAAC;AAC5B,MAAM,UAAU,GAAG,YAAY,CAAC;AAChC,MAAM,sBAAsB,GAA0D,cAAc,CAAC;AAErG,MAAM,CAAN,IAAY,SAGX;AAHD,WAAY,SAAS;IACnB,wBAAW,CAAA;IACX,gCAAmB,CAAA;AACrB,CAAC,EAHW,SAAS,KAAT,SAAS,QAGpB;AAED;;;;;;;;;;;;;;;;;;;;;;GAsBG;AACH,MAAM,UAAU,mBAAmB,CACjC,CAAS,EAAE,CAAS,EAAE,CAAS,EAAE,CAAS,EAC1C,CAA2B,EAAE,CAAS,EAAE,QAAgB,cAAc,EACtE,QAAgB,CAAC,EAAE,IAAI,GAAG,KAAK,EAAE,mBAA2B,GAAG,EAC/D,YAAoB,EAAE,EAAE,OAAgB,KAAK,EAAE,YAAuB,SAAS,CAAC,OAAO,EAAE,UAAuC,EAAE,EAAE,UAAkB,CAAC,EAAE,WAA+B,IAAI,EAAE,oBAA8B,EAAE,EAAE,qBAAoC,IAAI;;IACxQ,CAAC,CAAC,SAAS,GAAG,OAAO,CAAC;IACtB,IAAI,SAAS,GAAG,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;IAC/B,IAAI,QAAQ,GAAG,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,SAAS,CAAC;IACrC,IAAI,SAAS,KAAK,SAAS,CAAC,GAAG,EAAE;QAC/B,QAAQ,GAAG,EAAE,CAAC;KACf;IACD,IAAI,SAAS,GAAG,IAAI,CAAC;IACrB,IAAI,kBAAkB,GAAG,IAAI,CAAC;IAC9B,IAAI,QAAQ,IAAI,IAAI,EAAE;QACpB,SAAS,GAAG,CAAC,CAAA,MAAA,QAAQ,CAAC,IAAI,CAAC,MAAM,0CAAE,IAAI,CAAC,YAAY,CAAC,KAAI,IAAI,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;QAChH,kBAAkB,GAAG,CAAC,CAAA,MAAA,QAAQ,CAAC,IAAI,CAAC,MAAM,0CAAE,IAAI,CAAC,sBAAsB,CAAC,KAAI,IAAI,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,sBAAsB,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;KAC9I;IACD,MAAM,cAAc,GAAW,iBAAiB,CAAC,OAAO,CAAC,CAAC;IAC1D,IAAI,kBAAkB,IAAI,CAAC,iBAAiB,CAAC,MAAM,GAAG,CAAC,CAAC,EAAE;QACxD,gBAAgB,GAAG,CAAC,SAAS,IAAI,cAAc,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,gBAAgB,CAAC;KAC3E;IACD,IAAI,kBAAkB,IAAI,IAAI,EAAE;QAC9B,SAAS,GAAG,sBAAsB,CAAC,SAAS,EAAE,kBAAkB,CAAC,CAAC;KACnE;IAGD,IAAI,QAAQ,GAAQ,CAAC,CAAC,WAAW,CAAC,SAAS,GAAG,QAAQ,CAAC,CAAC;IACxD,MAAM,MAAM,GAAG,CAAC,CAAC;IAEjB,IAAI,gBAAgB,GAAG,CAAC,CAAC,WAAW,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC;IACtD,IAAI,aAAa,GAAG,CAAC,CAAC,WAAW,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC;IACnD,MAAM,EAAE,GAAG,CAAC,QAAQ,CAAC,qBAAqB,GAAG,QAAQ,CAAC,sBAAsB,CAAC,GAAG,CAAC,CAAC;IAClF,QAAQ,GAAG,QAAQ,CAAC,KAAK,CAAC;IAC1B,IAAI,SAAS,KAAK,SAAS,CAAC,GAAG,EAAE;QAC/B,gBAAgB,GAAG,OAAO,CAAC,OAAO,CAAC,CAAC;QACpC,QAAQ,GAAG,OAAO,CAAC,OAAO,CAAC,CAAC;KAC7B;IAED,SAAS,IAAI,CAAC,GAAW,EAAE,GAAW;QACpC,MAAM,SAAS,GAAG,SAAS,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,UAAU,CAAC;QACjD,CAAC,CAAC,SAAS,GAAG,SAAS,CAAC;QACxB,CAAC,CAAC,WAAW,GAAG,gBAAgB,CAAC;QACjC,IAAI,SAAS,KAAK,SAAS,CAAC,OAAO,EAAE;YACnC,CAAC,CAAC,QAAQ,CAAC,SAAS,EAAE,CAAC,GAAG,GAAG,EAAE,CAAC,GAAG,EAAE,CAAC,CAAC;YACvC,CAAC,CAAC,SAAS,GAAG,SAAS,CAAC;YACxB,CAAC,CAAC,QAAQ,CAAC,QAAQ,EAAE,CAAC,GAAG,GAAG,EAAE,CAAC,GAAG,EAAE,CAAC,CAAC;SACvC;QACD,IAAI,SAAS,KAAK,SAAS,CAAC,GAAG,EAAE;YAC/B,CAAC,CAAC,SAAS,GAAG,SAAS,CAAC;YACxB,CAAC,CAAC,QAAQ,CAAC,SAAS,EAAE,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,OAAO,CAAC,OAAO,CAAC,GAAG,aAAa,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC,GAAG,EAAE,CAAC,CAAC;SACnF;IACH,CAAC;IAED,IAAI,IAAI,IAAI,QAAQ,GAAG,CAAC,EAAE;QACxB,IAAI,CAAC,MAAM,EAAE,MAAM,GAAG,gBAAgB,CAAC,CAAC;QACxC,OAAO,CAAC,GAAG,gBAAgB,GAAG,CAAC,CAAC,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,CAAC;KAE7D;SAAM;QACL,MAAM,EAAE,GAAG,CAAC,CAAC,GAAG,QAAQ,CAAC,GAAG,CAAC,CAAC;QAC9B,IAAI,CAAC,EAAE,EAAE,EAAE,GAAG,gBAAgB,CAAC,CAAC;QAChC,OAAO,CAAC,GAAG,EAAE,GAAG,gBAAgB,CAAC;KAClC;AACH,CAAC","sourcesContent":["import * as DG from 'datagrok-api/dg';\n\nimport {monomerToShort} from './macromolecule';\n\nconst undefinedColor = 'rgb(100,100,100)';\nconst grayColor = '#808080';\nconst blackColor = 'rgb(0,0,0)';\nconst monomerToShortFunction: (amino: string, maxLengthOfMonomer: number) => string = monomerToShort;\n\nexport enum DrawStyle {\n  MSA = 'MSA',\n  classic = 'classic',\n}\n\n/**\n * A function that prints a string aligned to left or centered.\n *\n * @param {number} x x coordinate.\n * @param {number} y y coordinate.\n * @param {number} w Width.\n * @param {number} h Height.\n * @param {CanvasRenderingContext2D} g Canvas rendering context.\n * @param {string} s String to print.\n * @param {string} [color=undefinedColor] String color.\n * @param {number} [pivot=0] Pirvot.\n * @param {boolean} [left=false] Is left aligned.\n * @param {number} [transparencyRate=0.0] Transparency rate where 1.0 is fully transparent\n * @param {string} [separator=''] Is separator for sequence.\n * @param {boolean} [last=false] Is checker if element last or not.\n * @param drawStyle Is draw style. MSA - for multicharSeq, classic - for other seq.\n * @param maxWord Is array of max words for each line.\n * @param wordIdx Is index of word we currently draw.\n * @param gridCell Is grid cell.\n * @param referenceSequence Is reference sequence for diff mode.\n * @param maxLengthOfMonomer Is max length of monomer.\n * @return {number} x coordinate to start printing at.\n */\nexport function printLeftOrCentered(\n  x: number, y: number, w: number, h: number,\n  g: CanvasRenderingContext2D, s: string, color: string = undefinedColor,\n  pivot: number = 0, left = false, transparencyRate: number = 1.0,\n  separator: string = '', last: boolean = false, drawStyle: DrawStyle = DrawStyle.classic, maxWord: { [index: string]: number } = {}, wordIdx: number = 0, gridCell: DG.GridCell | null = null, referenceSequence: string[] = [], maxLengthOfMonomer: number | null = null): number {\n  g.textAlign = 'start';\n  let colorPart = s.substring(0);\n  let grayPart = last ? '' : separator;\n  if (drawStyle === DrawStyle.MSA) {\n    grayPart = '';\n  }\n  let colorCode = true;\n  let compareWithCurrent = true;\n  if (gridCell != null) {\n    colorCode = (gridCell.cell.column?.temp['color-code'] != null) ? gridCell.cell.column.temp['color-code'] : true;\n    compareWithCurrent = (gridCell.cell.column?.temp['compare-with-current'] != null) ? gridCell.cell.column.temp['compare-with-current'] : true;\n  }\n  const currentMonomer: string = referenceSequence[wordIdx];\n  if (compareWithCurrent && (referenceSequence.length > 0)) {\n    transparencyRate = (colorPart == currentMonomer) ? 0.3 : transparencyRate;\n  }\n  if (maxLengthOfMonomer != null) {\n    colorPart = monomerToShortFunction(colorPart, maxLengthOfMonomer);\n  }\n\n\n  let textSize: any = g.measureText(colorPart + grayPart);\n  const indent = 5;\n\n  let maxColorTextSize = g.measureText(colorPart).width;\n  let colorTextSize = g.measureText(colorPart).width;\n  const dy = (textSize.fontBoundingBoxAscent + textSize.fontBoundingBoxDescent) / 2;\n  textSize = textSize.width;\n  if (drawStyle === DrawStyle.MSA) {\n    maxColorTextSize = maxWord[wordIdx];\n    textSize = maxWord[wordIdx];\n  }\n\n  function draw(dx1: number, dx2: number): void {\n    const drawColor = colorCode ? color : blackColor;\n    g.fillStyle = drawColor;\n    g.globalAlpha = transparencyRate;\n    if (drawStyle === DrawStyle.classic) {\n      g.fillText(colorPart, x + dx1, y + dy);\n      g.fillStyle = grayColor;\n      g.fillText(grayPart, x + dx2, y + dy);\n    }\n    if (drawStyle === DrawStyle.MSA) {\n      g.fillStyle = drawColor;\n      g.fillText(colorPart, x + dx1 + ((maxWord[wordIdx] - colorTextSize) / 2), y + dy);\n    }\n  }\n\n  if (left || textSize > w) {\n    draw(indent, indent + maxColorTextSize);\n    return x + maxColorTextSize + g.measureText(grayPart).width;\n\n  } else {\n    const dx = (w - textSize) / 2;\n    draw(dx, dx + maxColorTextSize);\n    return x + dx + maxColorTextSize;\n  }\n}\n\n"]}

package/src/utils/macromolecule.d.ts

@@ -0,0 +1,86 @@
+import * as DG from 'datagrok-api/dg';
+/** Stats of sequences with specified splitter func, returns { freq, sameLength }.
+ * @param {DG.Column} seqCol
+ * @param {number} minLength
+ * @param {SplitterFunc} splitter
+ * @return { SeqColStats }, sameLength: boolean } stats of column sequences
+ */
+import { SeqPalette } from '../seq-palettes';
+import * as bio from '../../index';
+/** enum type to simplify setting "user-friendly" notation if necessary */
+export declare const enum NOTATION {
+    FASTA = "fasta",
+    SEPARATOR = "separator",
+    HELM = "helm"
+}
+export declare const enum ALPHABET {
+    DNA = "DNA",
+    RNA = "RNA",
+    PT = "PT",
+    UN = "UN"
+}
+export declare const enum TAGS {
+    aligned = "aligned",
+    alphabet = "alphabet",
+    alphabetSize = ".alphabetSize",
+    alphabetIsMultichar = ".alphabetIsMultichar",
+    separator = "separator"
+}
+export declare type SeqColStats = {
+    freq: MonomerFreqs;
+    sameLength: boolean;
+};
+export declare type SplitterFunc = (seq: string) => string[];
+export declare type MonomerFreqs = {
+    [m: string]: number;
+};
+export declare function getStats(seqCol: DG.Column, minLength: number, splitter: SplitterFunc): SeqColStats;
+export declare const monomerRe: RegExp;
+/** Split sequence for single character monomers, square brackets multichar monomer names or gap symbol.
+ * @param {any} seq object with sequence
+ * @return {string[]} array of monomers
+ */
+export declare function splitterAsFasta(seq: any): string[];
+/** Gets method to split sequence by separator
+ * @param {string} separator
+ * @param limit
+ * @return {SplitterFunc}
+ */
+export declare function getSplitterWithSeparator(separator: string, limit?: number | undefined): SplitterFunc;
+/** Splits Helm string to monomers, but does not replace monomer names to other notation (e.g. for RNA).
+ * Only for linear polymers, does not split RNA for ribose and phosphate monomers.
+ * @param {string} seq Source string of HELM notation
+ * @return {string[]}
+ */
+export declare function splitterAsHelm(seq: any): string[];
+/** Get splitter method to split sequences to monomers
+ * @param {string} units
+ * @param {string} separator
+ * @param limit
+ * @return {SplitterFunc}
+ */
+export declare function getSplitter(units: string, separator: string, limit?: number | undefined): SplitterFunc;
+/** Generate splitter function for sequence column
+ * @param {DG.Column} col
+ * @return {SplitterFunc} Splitter function
+ */
+export declare function getSplitterForColumn(col: DG.Column): SplitterFunc;
+/** Convert long monomer names to short ones */
+export declare function monomerToShort(amino: string, maxLengthOfMonomer: number): string;
+/** Calculate similarity in current sequence and alphabet.
+ * @param {MonomerFreqs} freq
+ * @param {Set<string>} alphabet
+ * @param {string} gapSymbol
+ * @return {number} Cosine similarity
+ */
+export declare function getAlphabetSimilarity(freq: MonomerFreqs, alphabet: Set<string>, gapSymbol?: string): number;
+export declare function detectAlphabet(stats: SeqColStats): string;
+/** Selects a suitable palette based on column data
+ * @param {DG.Column} seqCol Column to look for a palette
+ * @param {number}  minLength minimum length of sequence to detect palette (empty strings are allowed)
+ * @return {SeqPalette} Palette corresponding to the alphabet of the sequences in the column
+ */
+export declare function pickUpPalette(seqCol: DG.Column, minLength?: number): SeqPalette;
+export declare function getPaletteByType(paletteType: string): bio.SeqPalette;
+export declare function pickUpSeqCol(df: DG.DataFrame): DG.Column | null;
+//# sourceMappingURL=macromolecule.d.ts.map

package/src/utils/macromolecule.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"macromolecule.d.ts","sourceRoot":"","sources":["macromolecule.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAKtC;;;;;GAKG;AACH,OAAO,EAAC,UAAU,EAAC,MAAM,iBAAiB,CAAC;AAM3C,OAAO,KAAK,GAAG,MAAM,aAAa,CAAC;AAEnC,0EAA0E;AAC1E,0BAAkB,QAAQ;IACxB,KAAK,UAAU;IACf,SAAS,cAAc;IACvB,IAAI,SAAS;CACd;AAED,0BAAkB,QAAQ;IACxB,GAAG,QAAQ;IACX,GAAG,QAAQ;IACX,EAAE,OAAO;IACT,EAAE,OAAO;CACV;AAED,0BAAkB,IAAI;IACpB,OAAO,YAAY;IACnB,QAAQ,aAAa;IACrB,YAAY,kBAAkB;IAC9B,mBAAmB,yBAAyB;IAC5C,SAAS,cAAc;CACxB;AAED,oBAAY,WAAW,GAAG;IAAE,IAAI,EAAE,YAAY,CAAC;IAAC,UAAU,EAAE,OAAO,CAAA;CAAE,CAAA;AACrE,oBAAY,YAAY,GAAG,CAAC,GAAG,EAAE,MAAM,KAAK,MAAM,EAAE,CAAC;AACrD,oBAAY,YAAY,GAAG;IAAE,CAAC,CAAC,EAAE,MAAM,GAAG,MAAM,CAAA;CAAE,CAAC;AAEnD,wBAAgB,QAAQ,CAAC,MAAM,EAAE,EAAE,CAAC,MAAM,EAAE,SAAS,EAAE,MAAM,EAAE,QAAQ,EAAE,YAAY,GAAG,WAAW,CAsBlG;AAED,eAAO,MAAM,SAAS,EAAE,MAA8B,CAAC;AAEvD;;;GAGG;AACH,wBAAgB,eAAe,CAAC,GAAG,EAAE,GAAG,GAAG,MAAM,EAAE,CAYlD;AAED;;;;GAIG;AACH,wBAAgB,wBAAwB,CAAC,SAAS,EAAE,MAAM,EAAE,KAAK,GAAE,MAAM,GAAG,SAAqB,GAAG,YAAY,CAI/G;AAMD;;;;GAIG;AACH,wBAAgB,cAAc,CAAC,GAAG,EAAE,GAAG,GAAG,MAAM,EAAE,CAgBjD;AAED;;;;;GAKG;AACH,wBAAgB,WAAW,CAAC,KAAK,EAAE,MAAM,EAAE,SAAS,EAAE,MAAM,EAAE,KAAK,GAAE,MAAM,GAAG,SAAqB,GAAG,YAAY,CAWjH;AAED;;;GAGG;AACH,wBAAgB,oBAAoB,CAAC,GAAG,EAAE,EAAE,CAAC,MAAM,GAAG,YAAY,CAOjE;AAID,+CAA+C;AAC/C,wBAAgB,cAAc,CAAC,KAAK,EAAE,MAAM,EAAE,kBAAkB,EAAE,MAAM,GAAG,MAAM,CAKhF;AAED;;;;;GAKG;AACH,wBAAgB,qBAAqB,CAAC,IAAI,EAAE,YAAY,EAAE,QAAQ,EAAE,GAAG,CAAC,MAAM,CAAC,EAAE,SAAS,GAAE,MAAY,GAAG,MAAM,CAchH;AAED,wBAAgB,cAAc,CAAC,KAAK,EAAE,WAAW,GAAG,MAAM,CAazD;AAED;;;;GAIG;AACH,wBAAgB,aAAa,CAAC,MAAM,EAAE,EAAE,CAAC,MAAM,EAAE,SAAS,GAAE,MAAU,GAAG,UAAU,CAYlF;AAED,wBAAgB,gBAAgB,CAAC,WAAW,EAAE,MAAM,GAAG,GAAG,CAAC,UAAU,CAYpE;AAED,wBAAgB,YAAY,CAAC,EAAE,EAAE,EAAE,CAAC,SAAS,GAAG,EAAE,CAAC,MAAM,GAAG,IAAI,CAS/D"}

package/src/utils/macromolecule.js

@@ -0,0 +1,190 @@
+import * as DG from 'datagrok-api/dg';
+import { Vector } from '@datagrok-libraries/utils/src/type-declarations';
+import { vectorLength, vectorDotProduct } from '@datagrok-libraries/utils/src/vector-operations';
+import wu from 'wu';
+import { UnitsHandler } from '../utils/units-handler';
+import * as bio from '../../index';
+;
+export function getStats(seqCol, minLength, splitter) {
+    const freq = {};
+    let sameLength = true;
+    let firstLength = null;
+    for (const seq of seqCol.categories) {
+        const mSeq = splitter(seq);
+        if (firstLength == null)
+            firstLength = mSeq.length;
+        else if (mSeq.length !== firstLength)
+            sameLength = false;
+        if (mSeq.length > minLength) {
+            for (const m of mSeq) {
+                if (!(m in freq))
+                    freq[m] = 0;
+                freq[m] += 1;
+            }
+        }
+    }
+    return { freq: freq, sameLength: sameLength };
+}
+export const monomerRe = /\[(\w+)\]|(\w)|(-)/g;
+/** Split sequence for single character monomers, square brackets multichar monomer names or gap symbol.
+ * @param {any} seq object with sequence
+ * @return {string[]} array of monomers
+ */
+export function splitterAsFasta(seq) {
+    return wu(seq.toString().matchAll(monomerRe))
+        .map((ma) => {
+        let mRes;
+        const m = ma[0];
+        if (m.length > 1) {
+            mRes = ma[1];
+        }
+        else {
+            mRes = m;
+        }
+        return mRes;
+    }).toArray();
+}
+/** Gets method to split sequence by separator
+ * @param {string} separator
+ * @param limit
+ * @return {SplitterFunc}
+ */
+export function getSplitterWithSeparator(separator, limit = undefined) {
+    return (seq) => {
+        return seq.split(separator, limit);
+    };
+}
+const helmRe = /(PEPTIDE1|DNA1|RNA1)\{([^}]+)}/g;
+const helmPp1Re = /\[([^\[\]]+)]/g;
+/** Splits Helm string to monomers, but does not replace monomer names to other notation (e.g. for RNA).
+ * Only for linear polymers, does not split RNA for ribose and phosphate monomers.
+ * @param {string} seq Source string of HELM notation
+ * @return {string[]}
+ */
+export function splitterAsHelm(seq) {
+    helmRe.lastIndex = 0;
+    const ea = helmRe.exec(seq.toString());
+    const inSeq = ea ? ea[2] : null;
+    const mmPostProcess = (mm) => {
+        helmPp1Re.lastIndex = 0;
+        const pp1M = helmPp1Re.exec(mm);
+        if (pp1M && pp1M.length >= 2)
+            return pp1M[1];
+        else
+            return mm;
+    };
+    const mmList = inSeq ? inSeq.split('.') : [];
+    return mmList.map(mmPostProcess);
+}
+/** Get splitter method to split sequences to monomers
+ * @param {string} units
+ * @param {string} separator
+ * @param limit
+ * @return {SplitterFunc}
+ */
+export function getSplitter(units, separator, limit = undefined) {
+    if (units.toLowerCase().startsWith("fasta" /* NOTATION.FASTA */))
+        return splitterAsFasta;
+    else if (units.toLowerCase().startsWith("separator" /* NOTATION.SEPARATOR */))
+        return getSplitterWithSeparator(separator, limit);
+    else if (units.toLowerCase().startsWith("helm" /* NOTATION.HELM */))
+        return splitterAsHelm;
+    else
+        throw new Error(`Unexpected units ${units} .`);
+    // TODO: Splitter for HELM
+}
+/** Generate splitter function for sequence column
+ * @param {DG.Column} col
+ * @return {SplitterFunc} Splitter function
+ */
+export function getSplitterForColumn(col) {
+    if (col.semType !== DG.SEMTYPE.MACROMOLECULE)
+        throw new Error(`Get splitter for semType "${DG.SEMTYPE.MACROMOLECULE}" only.`);
+    const units = col.getTag(DG.TAGS.UNITS);
+    const separator = col.getTag("separator" /* TAGS.separator */);
+    return getSplitter(units, separator);
+}
+const longMonomerPartRe = /(\w+)/g;
+/** Convert long monomer names to short ones */
+export function monomerToShort(amino, maxLengthOfMonomer) {
+    var _a, _b;
+    const shortAminoMatch = amino.match(longMonomerPartRe);
+    const needAddDots = amino.length > maxLengthOfMonomer || ((_a = shortAminoMatch === null || shortAminoMatch === void 0 ? void 0 : shortAminoMatch.length) !== null && _a !== void 0 ? _a : 0) > 1;
+    const shortAmino = (_b = shortAminoMatch === null || shortAminoMatch === void 0 ? void 0 : shortAminoMatch[0]) !== null && _b !== void 0 ? _b : ' ';
+    return !needAddDots ? shortAmino : shortAmino.substring(0, maxLengthOfMonomer) + '…';
+}
+/** Calculate similarity in current sequence and alphabet.
+ * @param {MonomerFreqs} freq
+ * @param {Set<string>} alphabet
+ * @param {string} gapSymbol
+ * @return {number} Cosine similarity
+ */
+export function getAlphabetSimilarity(freq, alphabet, gapSymbol = '-') {
+    const keys = new Set([...new Set(Object.keys(freq)), ...alphabet]);
+    keys.delete(gapSymbol);
+    const freqA = [];
+    const alphabetA = [];
+    for (const m of keys) {
+        freqA.push(m in freq ? freq[m] : 0);
+        alphabetA.push(alphabet.has(m) ? 1 : 0);
+    }
+    /* There were a few ideas: chi-squared, pearson correlation (variance?), scalar product */
+    const freqV = new Vector(freqA);
+    const alphabetV = new Vector(alphabetA);
+    return vectorDotProduct(freqV, alphabetV) / (vectorLength(freqV) * vectorLength(alphabetV));
+}
+export function detectAlphabet(stats) {
+    const alphabetCandidates = [
+        ["PT" /* ALPHABET.PT */, UnitsHandler.PeptideFastaAlphabet],
+        ["DNA" /* ALPHABET.DNA */, UnitsHandler.DnaFastaAlphabet],
+        ["RNA" /* ALPHABET.RNA */, UnitsHandler.RnaFastaAlphabet],
+    ];
+    // Calculate likelihoods for alphabet_candidates
+    const alphabetCandidatesSim = alphabetCandidates.map((c) => getAlphabetSimilarity(stats.freq, c[1]));
+    const maxCos = Math.max(...alphabetCandidatesSim);
+    const alphabet = maxCos > 0.65 ? alphabetCandidates[alphabetCandidatesSim.indexOf(maxCos)][0] : 'UN';
+    return alphabet;
+}
+/** Selects a suitable palette based on column data
+ * @param {DG.Column} seqCol Column to look for a palette
+ * @param {number}  minLength minimum length of sequence to detect palette (empty strings are allowed)
+ * @return {SeqPalette} Palette corresponding to the alphabet of the sequences in the column
+ */
+export function pickUpPalette(seqCol, minLength = 5) {
+    let alphabet;
+    if (seqCol.semType == DG.SEMTYPE.MACROMOLECULE) {
+        const uh = new UnitsHandler(seqCol);
+        alphabet = uh.alphabet;
+    }
+    else {
+        const stats = getStats(seqCol, minLength, splitterAsFasta);
+        alphabet = detectAlphabet(stats);
+    }
+    const res = getPaletteByType(alphabet);
+    return res;
+}
+export function getPaletteByType(paletteType) {
+    switch (paletteType) {
+        case 'PT':
+            return bio.AminoacidsPalettes.GrokGroups;
+        case 'NT':
+        case 'DNA':
+        case 'RNA':
+            return bio.NucleotidesPalettes.Chromatogram;
+        // other
+        default:
+            return bio.UnknownSeqPalettes.Color;
+    }
+}
+export function pickUpSeqCol(df) {
+    var _a;
+    const semTypeColList = df.columns.bySemTypeAll(DG.SEMTYPE.MACROMOLECULE);
+    let resCol = (_a = semTypeColList.find((col) => {
+        const units = col.getTag(DG.TAGS.UNITS);
+        return units ? units.indexOf('MSA') !== -1 : false;
+    })) !== null && _a !== void 0 ? _a : null;
+    if (!resCol && semTypeColList.length > 0)
+        resCol = semTypeColList[0];
+    return resCol;
+}
+//# sourceMappingURL=data:application/json;base64,{"version":3,"file":"macromolecule.js","sourceRoot":"","sources":["macromolecule.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAEtC,OAAO,EAAC,MAAM,EAAC,MAAM,iDAAiD,CAAC;AACvE,OAAO,EAAC,YAAY,EAAE,gBAAgB,EAAC,MAAM,iDAAiD,CAAC;AAY/F,OAAO,EAAE,MAAM,IAAI,CAAC;AACpB,OAAO,EAAC,YAAY,EAAC,MAAM,wBAAwB,CAAC;AACpD,OAAO,KAAK,GAAG,MAAM,aAAa,CAAC;AAsBlC,CAAC;AAMF,MAAM,UAAU,QAAQ,CAAC,MAAiB,EAAE,SAAiB,EAAE,QAAsB;IACnF,MAAM,IAAI,GAA4B,EAAE,CAAC;IACzC,IAAI,UAAU,GAAG,IAAI,CAAC;IACtB,IAAI,WAAW,GAAG,IAAI,CAAC;IAEvB,KAAK,MAAM,GAAG,IAAI,MAAM,CAAC,UAAU,EAAE;QACnC,MAAM,IAAI,GAAG,QAAQ,CAAC,GAAG,CAAC,CAAC;QAE3B,IAAI,WAAW,IAAI,IAAI;YACrB,WAAW,GAAG,IAAI,CAAC,MAAM,CAAC;aACvB,IAAI,IAAI,CAAC,MAAM,KAAK,WAAW;YAClC,UAAU,GAAG,KAAK,CAAC;QAErB,IAAI,IAAI,CAAC,MAAM,GAAG,SAAS,EAAE;YAC3B,KAAK,MAAM,CAAC,IAAI,IAAI,EAAE;gBACpB,IAAI,CAAC,CAAC,CAAC,IAAI,IAAI,CAAC;oBACd,IAAI,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;gBACd,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;aACd;SACF;KACF;IACD,OAAO,EAAC,IAAI,EAAE,IAAI,EAAE,UAAU,EAAE,UAAU,EAAC,CAAC;AAC9C,CAAC;AAED,MAAM,CAAC,MAAM,SAAS,GAAW,qBAAqB,CAAC;AAEvD;;;GAGG;AACH,MAAM,UAAU,eAAe,CAAC,GAAQ;IACtC,OAAO,EAAE,CAAmB,GAAG,CAAC,QAAQ,EAAE,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC;SAC5D,GAAG,CAAC,CAAC,EAAoB,EAAE,EAAE;QAC5B,IAAI,IAAY,CAAC;QACjB,MAAM,CAAC,GAAW,EAAE,CAAC,CAAC,CAAC,CAAC;QACxB,IAAI,CAAC,CAAC,MAAM,GAAG,CAAC,EAAE;YAChB,IAAI,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC;SACd;aAAM;YACL,IAAI,GAAG,CAAC,CAAC;SACV;QACD,OAAO,IAAI,CAAC;IACd,CAAC,CAAC,CAAC,OAAO,EAAE,CAAC;AACjB,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,wBAAwB,CAAC,SAAiB,EAAE,QAA4B,SAAS;IAC/F,OAAO,CAAC,GAAW,EAAE,EAAE;QACrB,OAAO,GAAG,CAAC,KAAK,CAAC,SAAS,EAAE,KAAK,CAAC,CAAC;IACrC,CAAC,CAAC;AACJ,CAAC;AAED,MAAM,MAAM,GAAW,iCAAiC,CAAC;AACzD,MAAM,SAAS,GAAW,gBAAgB,CAAC;AAG3C;;;;GAIG;AACH,MAAM,UAAU,cAAc,CAAC,GAAQ;IACrC,MAAM,CAAC,SAAS,GAAG,CAAC,CAAC;IACrB,MAAM,EAAE,GAA2B,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,QAAQ,EAAE,CAAC,CAAC;IAC/D,MAAM,KAAK,GAAkB,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;IAE/C,MAAM,aAAa,GAAG,CAAC,EAAU,EAAU,EAAE;QAC3C,SAAS,CAAC,SAAS,GAAG,CAAC,CAAC;QACxB,MAAM,IAAI,GAAG,SAAS,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChC,IAAI,IAAI,IAAI,IAAI,CAAC,MAAM,IAAI,CAAC;YAC1B,OAAO,IAAI,CAAC,CAAC,CAAC,CAAC;;YAEf,OAAO,EAAE,CAAC;IACd,CAAC,CAAC;IAEF,MAAM,MAAM,GAAa,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;IACvD,OAAO,MAAM,CAAC,GAAG,CAAC,aAAa,CAAC,CAAC;AACnC,CAAC;AAED;;;;;GAKG;AACH,MAAM,UAAU,WAAW,CAAC,KAAa,EAAE,SAAiB,EAAE,QAA4B,SAAS;IACjG,IAAI,KAAK,CAAC,WAAW,EAAE,CAAC,UAAU,8BAAgB;QAChD,OAAO,eAAe,CAAC;SACpB,IAAI,KAAK,CAAC,WAAW,EAAE,CAAC,UAAU,sCAAoB;QACzD,OAAO,wBAAwB,CAAC,SAAS,EAAE,KAAK,CAAC,CAAC;SAC/C,IAAI,KAAK,CAAC,WAAW,EAAE,CAAC,UAAU,4BAAe;QACpD,OAAO,cAAc,CAAC;;QAEtB,MAAM,IAAI,KAAK,CAAC,oBAAoB,KAAK,IAAI,CAAC,CAAC;IAEjD,0BAA0B;AAC5B,CAAC;AAED;;;GAGG;AACH,MAAM,UAAU,oBAAoB,CAAC,GAAc;IACjD,IAAI,GAAG,CAAC,OAAO,KAAK,EAAE,CAAC,OAAO,CAAC,aAAa;QAC1C,MAAM,IAAI,KAAK,CAAC,6BAA6B,EAAE,CAAC,OAAO,CAAC,aAAa,SAAS,CAAC,CAAC;IAElF,MAAM,KAAK,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACxC,MAAM,SAAS,GAAG,GAAG,CAAC,MAAM,kCAAgB,CAAC;IAC7C,OAAO,WAAW,CAAC,KAAK,EAAE,SAAS,CAAC,CAAC;AACvC,CAAC;AAED,MAAM,iBAAiB,GAAW,QAAQ,CAAC;AAE3C,+CAA+C;AAC/C,MAAM,UAAU,cAAc,CAAC,KAAa,EAAE,kBAA0B;;IACtE,MAAM,eAAe,GAA4B,KAAK,CAAC,KAAK,CAAC,iBAAiB,CAAC,CAAC;IAChF,MAAM,WAAW,GAAY,KAAK,CAAC,MAAM,GAAG,kBAAkB,IAAI,CAAC,MAAA,eAAe,aAAf,eAAe,uBAAf,eAAe,CAAE,MAAM,mCAAI,CAAC,CAAC,GAAG,CAAC,CAAC;IACrG,MAAM,UAAU,GAAG,MAAA,eAAe,aAAf,eAAe,uBAAf,eAAe,CAAG,CAAC,CAAC,mCAAI,GAAG,CAAC;IAC/C,OAAO,CAAC,WAAW,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC,CAAC,UAAU,CAAC,SAAS,CAAC,CAAC,EAAE,kBAAkB,CAAC,GAAG,GAAG,CAAC;AACvF,CAAC;AAED;;;;;GAKG;AACH,MAAM,UAAU,qBAAqB,CAAC,IAAkB,EAAE,QAAqB,EAAE,YAAoB,GAAG;IACtG,MAAM,IAAI,GAAG,IAAI,GAAG,CAAS,CAAC,GAAG,IAAI,GAAG,CAAC,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,EAAE,GAAG,QAAQ,CAAC,CAAC,CAAC;IAC3E,IAAI,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC;IAEvB,MAAM,KAAK,GAAa,EAAE,CAAC;IAC3B,MAAM,SAAS,GAAa,EAAE,CAAC;IAC/B,KAAK,MAAM,CAAC,IAAI,IAAI,EAAE;QACpB,KAAK,CAAC,IAAI,CAAC,CAAC,IAAI,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;QACpC,SAAS,CAAC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;KACzC;IACD,0FAA0F;IAC1F,MAAM,KAAK,GAAW,IAAI,MAAM,CAAC,KAAK,CAAC,CAAC;IACxC,MAAM,SAAS,GAAW,IAAI,MAAM,CAAC,SAAS,CAAC,CAAC;IAChD,OAAO,gBAAgB,CAAC,KAAK,EAAE,SAAS,CAAC,GAAG,CAAC,YAAY,CAAC,KAAK,CAAC,GAAG,YAAY,CAAC,SAAS,CAAC,CAAC,CAAC;AAC9F,CAAC;AAED,MAAM,UAAU,cAAc,CAAC,KAAkB;IAC/C,MAAM,kBAAkB,GAA4B;QAClD,yBAAc,YAAY,CAAC,oBAAoB,CAAC;QAChD,2BAAe,YAAY,CAAC,gBAAgB,CAAC;QAC7C,2BAAe,YAAY,CAAC,gBAAgB,CAAC;KAC9C,CAAC;IAEF,gDAAgD;IAChD,MAAM,qBAAqB,GAAa,kBAAkB,CAAC,GAAG,CAC5D,CAAC,CAAC,EAAE,EAAE,CAAC,qBAAqB,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;IAClD,MAAM,MAAM,GAAG,IAAI,CAAC,GAAG,CAAC,GAAG,qBAAqB,CAAC,CAAC;IAClD,MAAM,QAAQ,GAAG,MAAM,GAAG,IAAI,CAAC,CAAC,CAAC,kBAAkB,CAAC,qBAAqB,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;IACrG,OAAO,QAAQ,CAAC;AAClB,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,aAAa,CAAC,MAAiB,EAAE,YAAoB,CAAC;IACpE,IAAI,QAAgB,CAAC;IACrB,IAAI,MAAM,CAAC,OAAO,IAAI,EAAE,CAAC,OAAO,CAAC,aAAa,EAAE;QAC9C,MAAM,EAAE,GAAiB,IAAI,YAAY,CAAC,MAAM,CAAC,CAAC;QAClD,QAAQ,GAAG,EAAE,CAAC,QAAQ,CAAC;KACxB;SAAM;QACL,MAAM,KAAK,GAAgB,QAAQ,CAAC,MAAM,EAAE,SAAS,EAAE,eAAe,CAAC,CAAC;QACxE,QAAQ,GAAG,cAAc,CAAC,KAAK,CAAC,CAAC;KAClC;IAED,MAAM,GAAG,GAAG,gBAAgB,CAAC,QAAQ,CAAC,CAAC;IACvC,OAAO,GAAG,CAAC;AACb,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,WAAmB;IAClD,QAAQ,WAAW,EAAE;QACrB,KAAK,IAAI;YACP,OAAO,GAAG,CAAC,kBAAkB,CAAC,UAAU,CAAC;QAC3C,KAAK,IAAI,CAAC;QACV,KAAK,KAAK,CAAC;QACX,KAAK,KAAK;YACR,OAAO,GAAG,CAAC,mBAAmB,CAAC,YAAY,CAAC;QAC5C,QAAQ;QACV;YACE,OAAO,GAAG,CAAC,kBAAkB,CAAC,KAAK,CAAC;KACrC;AACH,CAAC;AAED,MAAM,UAAU,YAAY,CAAC,EAAgB;;IAC3C,MAAM,cAAc,GAAG,EAAE,CAAC,OAAO,CAAC,YAAY,CAAC,EAAE,CAAC,OAAO,CAAC,aAAa,CAAC,CAAC;IACzE,IAAI,MAAM,GAAqB,MAAA,cAAc,CAAC,IAAI,CAAC,CAAC,GAAG,EAAE,EAAE;QACzD,MAAM,KAAK,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;QACxC,OAAO,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;IACrD,CAAC,CAAC,mCAAI,IAAI,CAAC;IACX,IAAI,CAAC,MAAM,IAAI,cAAc,CAAC,MAAM,GAAG,CAAC;QACtC,MAAM,GAAG,cAAc,CAAC,CAAC,CAAC,CAAC;IAC7B,OAAO,MAAM,CAAC;AAChB,CAAC","sourcesContent":["import * as grok from 'datagrok-api/grok';\nimport * as ui from 'datagrok-api/ui';\nimport * as DG from 'datagrok-api/dg';\n\nimport {Vector} from '@datagrok-libraries/utils/src/type-declarations';\nimport {vectorLength, vectorDotProduct} from '@datagrok-libraries/utils/src/vector-operations';\n\n/** Stats of sequences with specified splitter func, returns { freq, sameLength }.\n * @param {DG.Column} seqCol\n * @param {number} minLength\n * @param {SplitterFunc} splitter\n * @return { SeqColStats }, sameLength: boolean } stats of column sequences\n */\nimport {SeqPalette} from '../seq-palettes';\nimport {Aminoacids, AminoacidsPalettes} from '../aminoacids';\nimport {Nucleotides, NucleotidesPalettes} from '../nucleotides';\nimport {UnknownSeqPalettes} from '../unknown';\nimport wu from 'wu';\nimport {UnitsHandler} from '../utils/units-handler';\nimport * as bio from '../../index';\n\n/** enum type to simplify setting \"user-friendly\" notation if necessary */\nexport const enum NOTATION {\n  FASTA = 'fasta',\n  SEPARATOR = 'separator',\n  HELM = 'helm',\n}\n\nexport const enum ALPHABET {\n  DNA = 'DNA',\n  RNA = 'RNA',\n  PT = 'PT',\n  UN = 'UN',\n}\n\nexport const enum TAGS {\n  aligned = 'aligned',\n  alphabet = 'alphabet',\n  alphabetSize = '.alphabetSize',\n  alphabetIsMultichar = '.alphabetIsMultichar',\n  separator = 'separator',\n};\n\nexport type SeqColStats = { freq: MonomerFreqs, sameLength: boolean }\nexport type SplitterFunc = (seq: string) => string[];\nexport type MonomerFreqs = { [m: string]: number };\n\nexport function getStats(seqCol: DG.Column, minLength: number, splitter: SplitterFunc): SeqColStats {\n  const freq: { [m: string]: number } = {};\n  let sameLength = true;\n  let firstLength = null;\n\n  for (const seq of seqCol.categories) {\n    const mSeq = splitter(seq);\n\n    if (firstLength == null)\n      firstLength = mSeq.length;\n    else if (mSeq.length !== firstLength)\n      sameLength = false;\n\n    if (mSeq.length > minLength) {\n      for (const m of mSeq) {\n        if (!(m in freq))\n          freq[m] = 0;\n        freq[m] += 1;\n      }\n    }\n  }\n  return {freq: freq, sameLength: sameLength};\n}\n\nexport const monomerRe: RegExp = /\\[(\\w+)\\]|(\\w)|(-)/g;\n\n/** Split sequence for single character monomers, square brackets multichar monomer names or gap symbol.\n * @param {any} seq object with sequence\n * @return {string[]} array of monomers\n */\nexport function splitterAsFasta(seq: any): string[] {\n  return wu<RegExpMatchArray>(seq.toString().matchAll(monomerRe))\n    .map((ma: RegExpMatchArray) => {\n      let mRes: string;\n      const m: string = ma[0];\n      if (m.length > 1) {\n        mRes = ma[1];\n      } else {\n        mRes = m;\n      }\n      return mRes;\n    }).toArray();\n}\n\n/** Gets method to split sequence by separator\n * @param {string} separator\n * @param limit\n * @return {SplitterFunc}\n */\nexport function getSplitterWithSeparator(separator: string, limit: number | undefined = undefined): SplitterFunc {\n  return (seq: string) => {\n    return seq.split(separator, limit);\n  };\n}\n\nconst helmRe: RegExp = /(PEPTIDE1|DNA1|RNA1)\\{([^}]+)}/g;\nconst helmPp1Re: RegExp = /\\[([^\\[\\]]+)]/g;\n\n\n/** Splits Helm string to monomers, but does not replace monomer names to other notation (e.g. for RNA).\n * Only for linear polymers, does not split RNA for ribose and phosphate monomers.\n * @param {string} seq Source string of HELM notation\n * @return {string[]}\n */\nexport function splitterAsHelm(seq: any): string[] {\n  helmRe.lastIndex = 0;\n  const ea: RegExpExecArray | null = helmRe.exec(seq.toString());\n  const inSeq: string | null = ea ? ea[2] : null;\n\n  const mmPostProcess = (mm: string): string => {\n    helmPp1Re.lastIndex = 0;\n    const pp1M = helmPp1Re.exec(mm);\n    if (pp1M && pp1M.length >= 2)\n      return pp1M[1];\n    else\n      return mm;\n  };\n\n  const mmList: string[] = inSeq ? inSeq.split('.') : [];\n  return mmList.map(mmPostProcess);\n}\n\n/** Get splitter method to split sequences to monomers\n * @param {string} units\n * @param {string} separator\n * @param limit\n * @return {SplitterFunc}\n */\nexport function getSplitter(units: string, separator: string, limit: number | undefined = undefined): SplitterFunc {\n  if (units.toLowerCase().startsWith(NOTATION.FASTA))\n    return splitterAsFasta;\n  else if (units.toLowerCase().startsWith(NOTATION.SEPARATOR))\n    return getSplitterWithSeparator(separator, limit);\n  else if (units.toLowerCase().startsWith(NOTATION.HELM))\n    return splitterAsHelm;\n  else\n    throw new Error(`Unexpected units ${units} .`);\n\n  // TODO: Splitter for HELM\n}\n\n/** Generate splitter function for sequence column\n * @param {DG.Column} col\n * @return {SplitterFunc} Splitter function\n */\nexport function getSplitterForColumn(col: DG.Column): SplitterFunc {\n  if (col.semType !== DG.SEMTYPE.MACROMOLECULE)\n    throw new Error(`Get splitter for semType \"${DG.SEMTYPE.MACROMOLECULE}\" only.`);\n\n  const units = col.getTag(DG.TAGS.UNITS);\n  const separator = col.getTag(TAGS.separator);\n  return getSplitter(units, separator);\n}\n\nconst longMonomerPartRe: RegExp = /(\\w+)/g;\n\n/** Convert long monomer names to short ones */\nexport function monomerToShort(amino: string, maxLengthOfMonomer: number): string {\n  const shortAminoMatch: RegExpMatchArray | null = amino.match(longMonomerPartRe);\n  const needAddDots: boolean = amino.length > maxLengthOfMonomer || (shortAminoMatch?.length ?? 0) > 1;\n  const shortAmino = shortAminoMatch?.[0] ?? ' ';\n  return !needAddDots ? shortAmino : shortAmino.substring(0, maxLengthOfMonomer) + '…';\n}\n\n/** Calculate similarity in current sequence and alphabet.\n * @param {MonomerFreqs} freq\n * @param {Set<string>} alphabet\n * @param {string} gapSymbol\n * @return {number} Cosine similarity\n */\nexport function getAlphabetSimilarity(freq: MonomerFreqs, alphabet: Set<string>, gapSymbol: string = '-'): number {\n  const keys = new Set<string>([...new Set(Object.keys(freq)), ...alphabet]);\n  keys.delete(gapSymbol);\n\n  const freqA: number[] = [];\n  const alphabetA: number[] = [];\n  for (const m of keys) {\n    freqA.push(m in freq ? freq[m] : 0);\n    alphabetA.push(alphabet.has(m) ? 1 : 0);\n  }\n  /* There were a few ideas: chi-squared, pearson correlation (variance?), scalar product */\n  const freqV: Vector = new Vector(freqA);\n  const alphabetV: Vector = new Vector(alphabetA);\n  return vectorDotProduct(freqV, alphabetV) / (vectorLength(freqV) * vectorLength(alphabetV));\n}\n\nexport function detectAlphabet(stats: SeqColStats): string {\n  const alphabetCandidates: [string, Set<string>][] = [\n    [ALPHABET.PT, UnitsHandler.PeptideFastaAlphabet],\n    [ALPHABET.DNA, UnitsHandler.DnaFastaAlphabet],\n    [ALPHABET.RNA, UnitsHandler.RnaFastaAlphabet],\n  ];\n\n  // Calculate likelihoods for alphabet_candidates\n  const alphabetCandidatesSim: number[] = alphabetCandidates.map(\n    (c) => getAlphabetSimilarity(stats.freq, c[1]));\n  const maxCos = Math.max(...alphabetCandidatesSim);\n  const alphabet = maxCos > 0.65 ? alphabetCandidates[alphabetCandidatesSim.indexOf(maxCos)][0] : 'UN';\n  return alphabet;\n}\n\n/** Selects a suitable palette based on column data\n * @param {DG.Column} seqCol Column to look for a palette\n * @param {number}  minLength minimum length of sequence to detect palette (empty strings are allowed)\n * @return {SeqPalette} Palette corresponding to the alphabet of the sequences in the column\n */\nexport function pickUpPalette(seqCol: DG.Column, minLength: number = 5): SeqPalette {\n  let alphabet: string;\n  if (seqCol.semType == DG.SEMTYPE.MACROMOLECULE) {\n    const uh: UnitsHandler = new UnitsHandler(seqCol);\n    alphabet = uh.alphabet;\n  } else {\n    const stats: SeqColStats = getStats(seqCol, minLength, splitterAsFasta);\n    alphabet = detectAlphabet(stats);\n  }\n\n  const res = getPaletteByType(alphabet);\n  return res;\n}\n\nexport function getPaletteByType(paletteType: string): bio.SeqPalette {\n  switch (paletteType) {\n  case 'PT':\n    return bio.AminoacidsPalettes.GrokGroups;\n  case 'NT':\n  case 'DNA':\n  case 'RNA':\n    return bio.NucleotidesPalettes.Chromatogram;\n    // other\n  default:\n    return bio.UnknownSeqPalettes.Color;\n  }\n}\n\nexport function pickUpSeqCol(df: DG.DataFrame): DG.Column | null {\n  const semTypeColList = df.columns.bySemTypeAll(DG.SEMTYPE.MACROMOLECULE);\n  let resCol: DG.Column | null = semTypeColList.find((col) => {\n    const units = col.getTag(DG.TAGS.UNITS);\n    return units ? units.indexOf('MSA') !== -1 : false;\n  }) ?? null;\n  if (!resCol && semTypeColList.length > 0)\n    resCol = semTypeColList[0];\n  return resCol;\n}\n"]}

package/src/utils/notation-converter.d.ts

@@ -1,6 +1,6 @@
 import * as DG from 'datagrok-api/dg';
-import { SplitterFunc } from '../viewers/web-logo';
-import { UnitsHandler, NOTATION } from './units-handler';
+import { UnitsHandler } from './units-handler';
+import { NOTATION, SplitterFunc } from './macromolecule';
 /** Class for handling conversion of notation systems in Macromolecule columns */
 export declare class NotationConverter extends UnitsHandler {
     private _splitter;

package/src/utils/notation-converter.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"notation-converter.d.ts","sourceRoot":"","sources":["notation-converter.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AACtC,OAAO,EAAC,YAAY,EAAU,MAAM,qBAAqB,CAAC;AAC1D,OAAO,EAAC,YAAY,EAAE,QAAQ,EAAC,MAAM,iBAAiB,CAAC;AAEvD,iFAAiF;AACjF,qBAAa,iBAAkB,SAAQ,YAAY;IACjD,OAAO,CAAC,SAAS,CAA6B;IAC9C,SAAS,KAAK,QAAQ,IAAI,YAAY,CAIrC;IAEM,OAAO,CAAC,cAAc,EAAE,QAAQ,GAAG,OAAO;IAE1C,WAAW,CAAC,cAAc,EAAE,QAAQ,GAAG,OAAO;IAE9C,MAAM,CAAC,cAAc,EAAE,QAAQ,GAAG,OAAO;IAEhD;;;;;;OAMG;IACH,OAAO,CAAC,uBAAuB;IAmB/B;;;;;OAKG;IACH,OAAO,CAAC,eAAe;IAiBvB,OAAO,CAAC,mBAAmB;IAkB3B;;;;;;;OAOG;IACI,mBAAmB,CACxB,aAAa,EAAE,MAAM,EACrB,eAAe,GAAE,MAAM,GAAG,IAAW,GACpC,MAAM;IAOT;;;;;OAKG;IACH,OAAO,CAAC,aAAa;IAerB;;;;;OAKG;IACH,OAAO,CAAC,uBAAuB;IA4B/B;;;;;;;;OAQG;IACH,OAAO,CAAC,WAAW;IAiDnB,OAAO,CAAC,sBAAsB;IAK9B;;;;;OAKG;IACI,OAAO,CAAC,WAAW,EAAE,QAAQ,EAAE,YAAY,GAAE,MAAM,GAAG,IAAW,GAAG,EAAE,CAAC,MAAM;gBAmBjE,GAAG,EAAE,EAAE,CAAC,MAAM;CAGlC"}
+{"version":3,"file":"notation-converter.d.ts","sourceRoot":"","sources":["notation-converter.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAEtC,OAAO,EAAC,YAAY,EAAC,MAAM,iBAAiB,CAAC;AAC7C,OAAO,EAAuB,QAAQ,EAAE,YAAY,EAAO,MAAM,iBAAiB,CAAC;AAEnF,iFAAiF;AACjF,qBAAa,iBAAkB,SAAQ,YAAY;IACjD,OAAO,CAAC,SAAS,CAA6B;IAC9C,SAAS,KAAK,QAAQ,IAAI,YAAY,CAIrC;IAEM,OAAO,CAAC,cAAc,EAAE,QAAQ,GAAG,OAAO;IAE1C,WAAW,CAAC,cAAc,EAAE,QAAQ,GAAG,OAAO;IAE9C,MAAM,CAAC,cAAc,EAAE,QAAQ,GAAG,OAAO;IAEhD;;;;;;OAMG;IACH,OAAO,CAAC,uBAAuB;IAmB/B;;;;;OAKG;IACH,OAAO,CAAC,eAAe;IAiBvB,OAAO,CAAC,mBAAmB;IAkB3B;;;;;;;OAOG;IACI,mBAAmB,CACxB,aAAa,EAAE,MAAM,EACrB,eAAe,GAAE,MAAM,GAAG,IAAW,GACpC,MAAM;IAOT;;;;;OAKG;IACH,OAAO,CAAC,aAAa;IAerB;;;;;OAKG;IACH,OAAO,CAAC,uBAAuB;IA4B/B;;;;;;;;OAQG;IACH,OAAO,CAAC,WAAW;IAiDnB,OAAO,CAAC,sBAAsB;IAK9B;;;;;OAKG;IACI,OAAO,CAAC,WAAW,EAAE,QAAQ,EAAE,YAAY,GAAE,MAAM,GAAG,IAAW,GAAG,EAAE,CAAC,MAAM;gBAmBjE,GAAG,EAAE,EAAE,CAAC,MAAM;CAGlC"}