npm - @cyanheads/brapi-mcp-server - Versions diffs - 0.4.6 → 0.4.7 - Mend

@cyanheads/brapi-mcp-server 0.4.6 → 0.4.7

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (44) hide show

package/dist/mcp-server/tools/shared/find-helpers.js.map CHANGED Viewed

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1	- 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package/dist/services/brapi-client/brapi-client.d.ts CHANGED Viewed

@@ -9,6 +9,7 @@
  * @module services/brapi-client/brapi-client
  */
 import type { Context } from '@cyanheads/mcp-ts-core';
+import { McpError } from '@cyanheads/mcp-ts-core/errors';
 import type { FetchWithTimeoutOptions } from '@cyanheads/mcp-ts-core/utils';
 import type { ServerConfig } from '../../config/server-config.js';
 import type { BinaryResponse, BrapiEnvelope, BrapiRequestOptions, SearchResponse } from './types.js';
@@ -22,7 +23,15 @@ export declare class BrapiClient {
     private readonly serverConfig;
     private readonly fetcher;
     constructor(serverConfig: ServerConfig, fetcher?: Fetcher);
-    /** GET /{path} with optional query params and auth. */
+    /**
+     * GET /{path} with optional query params and auth. When `options.dialect` is
+     * supplied, `params` are routed through the dialect adapter at the client
+     * edge — single source of truth for plural/singular translation across every
+     * call site (find_* tools, FK lookups, count probes). Throws a structured
+     * `validationError` (with `data.reason = DIALECT_ALL_DROPPED_REASON`) when
+     * the dialect drops every supplied filter, so callers can detect and skip
+     * without parsing message text.
+     */
     get<T>(baseUrl: string, path: string, ctx: Context, options?: BrapiRequestOptions): Promise<BrapiEnvelope<T>>;
     /**
      * GET /{path} returning raw bytes — used for image content and other binary
@@ -69,6 +78,12 @@ export declare class BrapiClient {
     private buildHeaders;
     private parseEnvelope;
 }
+/**
+ * True when `err` was thrown by the client-level dialect adapter to signal
+ * "every supplied filter dropped." Used by companion call sites to convert
+ * the throw into a graceful warn-and-skip instead of propagating to the user.
+ */
+export declare function isDialectAllDropped(err: unknown): err is McpError;
 export declare function initBrapiClient(serverConfig: ServerConfig, fetcher?: Fetcher): void;
 export declare function getBrapiClient(): BrapiClient;
 /** Test-only — clears the singleton so successive suites start clean. */

package/dist/services/brapi-client/brapi-client.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/services/brapi-client/brapi-client.js CHANGED Viewed

@@ -10,6 +10,7 @@
  */
 import { forbidden, internalError, JsonRpcErrorCode, McpError, notFound, rateLimited, serviceUnavailable, unauthorized, validationError, } from '@cyanheads/mcp-ts-core/errors';
 import { fetchWithTimeout, withRetry } from '@cyanheads/mcp-ts-core/utils';
+import { DIALECT_ALL_DROPPED_REASON } from './types.js';
 /**
  * The framework's `Context` and `RequestContext` are structurally compatible
  * at runtime — framework docs confirm passing `Context` to `fetchWithTimeout`
@@ -26,15 +27,24 @@ export class BrapiClient {
         this.serverConfig = serverConfig;
         this.fetcher = fetcher;
     }
-    /** GET /{path} with optional query params and auth. */
-    get(baseUrl, path, ctx, options = {}) {
-        return withRetry(async () => {
-            const response = await this.doFetch(this.buildUrl(baseUrl, path, options.params), ctx, { method: 'GET', headers: this.buildHeaders(options.auth) }, options.timeoutMs);
+    /**
+     * GET /{path} with optional query params and auth. When `options.dialect` is
+     * supplied, `params` are routed through the dialect adapter at the client
+     * edge — single source of truth for plural/singular translation across every
+     * call site (find_* tools, FK lookups, count probes). Throws a structured
+     * `validationError` (with `data.reason = DIALECT_ALL_DROPPED_REASON`) when
+     * the dialect drops every supplied filter, so callers can detect and skip
+     * without parsing message text.
+     */
+    async get(baseUrl, path, ctx, options = {}) {
+        const params = applyDialectToParams(path, options);
+        return await withRetry(async () => {
+            const response = await this.doFetch(this.buildUrl(baseUrl, path, params), ctx, { method: 'GET', headers: this.buildHeaders(options.auth) }, options.timeoutMs);
             return this.parseEnvelope(response);
         }, {
             operation: `brapi.get ${path}`,
             context: asRequestContext(ctx),
-            maxRetries: this.serverConfig.retryMaxAttempts,
+            maxRetries: options.retryMaxAttempts ?? this.serverConfig.retryMaxAttempts,
             baseDelayMs: this.serverConfig.retryBaseDelayMs,
             signal: ctx.signal,
         });
@@ -270,6 +280,56 @@ function asRecord(value) {
 function isEnvelope(value) {
     return typeof value === 'object' && value !== null && 'metadata' in value && 'result' in value;
 }
+/**
+ * Resolve the dialect endpoint segment from a request path. The segment is
+ * the bare resource name dialect mappings are keyed by (`/trials` →
+ * `trials`, `/germplasm/X/attributes` → `germplasm`). Path-param endpoints
+ * generally don't need filter translation; passing the first segment keeps
+ * lookups consistent and the dialect adapter no-ops on unknown endpoints.
+ */
+function dialectEndpointFor(path) {
+    return path.replace(/^\/+/, '').split('/')[0] ?? '';
+}
+/**
+ * Apply the dialect adapter to a request's params when a dialect is supplied.
+ * Empty / undefined params short-circuit (nothing to translate); when the
+ * adapter drops every supplied filter we throw a structured `validationError`
+ * with the canonical `dialect_all_filters_dropped` reason so companions can
+ * `.catch` and skip without surfacing the unfiltered baseline.
+ */
+function applyDialectToParams(path, options) {
+    const dialect = options.dialect;
+    const params = options.params;
+    if (!dialect || !params)
+        return params;
+    const inputKeyCount = Object.keys(params).length;
+    if (inputKeyCount === 0)
+        return params;
+    const adapted = dialect.adaptGetFilters(dialectEndpointFor(path), params);
+    if (options.warnings)
+        options.warnings.push(...adapted.warnings);
+    if (adapted.dropped.length > 0 && Object.keys(adapted.filters).length === 0) {
+        throw validationError(`Every supplied filter was dropped by the ${dialect.id} dialect on ${path} (${adapted.dropped.join(', ')}); call would silently widen to the unfiltered baseline.`, {
+            reason: DIALECT_ALL_DROPPED_REASON,
+            dialect: dialect.id,
+            path,
+            dropped: adapted.dropped,
+        });
+    }
+    return adapted.filters;
+}
+/**
+ * True when `err` was thrown by the client-level dialect adapter to signal
+ * "every supplied filter dropped." Used by companion call sites to convert
+ * the throw into a graceful warn-and-skip instead of propagating to the user.
+ */
+export function isDialectAllDropped(err) {
+    return (err instanceof McpError &&
+        err.code === JsonRpcErrorCode.ValidationError &&
+        typeof err.data === 'object' &&
+        err.data !== null &&
+        err.data.reason === DIALECT_ALL_DROPPED_REASON);
+}
 /**
  * Some BrAPI servers embed `searchResultsDbId` inside the `result` object on
  * an otherwise empty payload. Detect that case.

package/dist/services/brapi-client/brapi-client.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/services/brapi-client/index.d.ts CHANGED Viewed

@@ -4,6 +4,7 @@
  * @module services/brapi-client
  */
 export type { Fetcher } from './brapi-client.js';
-export { BrapiClient, getBrapiClient, initBrapiClient, resetBrapiClient, } from './brapi-client.js';
+export { BrapiClient, getBrapiClient, initBrapiClient, isDialectAllDropped, resetBrapiClient, } from './brapi-client.js';
 export type { BinaryResponse, BrapiAuth, BrapiEnvelope, BrapiMetadata, BrapiPagination, BrapiRequestOptions, BrapiStatus, ResolvedAuth, SearchResponse, } from './types.js';
+export { DIALECT_ALL_DROPPED_REASON } from './types.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/services/brapi-client/index.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/services/brapi-client/index.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,YAAY,EAAE,OAAO,EAAE,MAAM,mBAAmB,CAAC;AACjD,OAAO,EACL,WAAW,EACX,cAAc,EACd,eAAe,EACf,mBAAmB,EACnB,gBAAgB,GACjB,MAAM,mBAAmB,CAAC;AAC3B,YAAY,EACV,cAAc,EACd,SAAS,EACT,aAAa,EACb,aAAa,EACb,eAAe,EACf,mBAAmB,EACnB,WAAW,EACX,YAAY,EACZ,cAAc,GACf,MAAM,YAAY,CAAC;AACpB,OAAO,EAAE,0BAA0B,EAAE,MAAM,YAAY,CAAC"}

package/dist/services/brapi-client/index.js CHANGED Viewed

@@ -3,5 +3,6 @@
  *
  * @module services/brapi-client
  */
-export { BrapiClient, getBrapiClient, initBrapiClient, resetBrapiClient, } from './brapi-client.js';
+export { BrapiClient, getBrapiClient, initBrapiClient, isDialectAllDropped, resetBrapiClient, } from './brapi-client.js';
+export { DIALECT_ALL_DROPPED_REASON } from './types.js';
 //# sourceMappingURL=index.js.map

package/dist/services/brapi-client/index.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/services/brapi-client/index.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAGH,OAAO,EACL,WAAW,EACX,cAAc,EACd,eAAe,EACf,mBAAmB,EACnB,gBAAgB,GACjB,MAAM,mBAAmB,CAAC;AAY3B,OAAO,EAAE,0BAA0B,EAAE,MAAM,YAAY,CAAC"}

package/dist/services/brapi-client/types.d.ts CHANGED Viewed

@@ -4,6 +4,7 @@
  *
  * @module services/brapi-client/types
  */
+import type { BrapiDialect } from '../../services/brapi-dialect/types.js';
 /** BrAPI v2 standard response envelope. */
 export interface BrapiEnvelope<T> {
     metadata: BrapiMetadata;
@@ -57,11 +58,34 @@ export interface ResolvedAuth {
 }
 export interface BrapiRequestOptions {
     auth?: ResolvedAuth;
+    /**
+     * Per-server dialect. When supplied, `BrapiClient.get` extracts the endpoint
+     * segment from `path` and routes `params` through `dialect.adaptGetFilters`
+     * before serializing — so plural-vs-singular mismatches and silently-dropped
+     * filters are handled uniformly at the client edge instead of at every call
+     * site. Omit on intentional passthrough paths (`raw_get`).
+     */
+    dialect?: BrapiDialect;
     /** Query params. Arrays are repeated per BrAPI convention. */
     params?: Record<string, string | number | boolean | readonly (string | number)[] | undefined>;
+    /**
+     * Override the global retry budget for this single call. Use `0` for
+     * companion enrichments where retries compound latency without producing a
+     * different outcome. Falls back to `BRAPI_RETRY_MAX_ATTEMPTS` when omitted.
+     */
+    retryMaxAttempts?: number;
     /** Override the config default timeout. */
     timeoutMs?: number;
+    /**
+     * Sink for dialect translation warnings. When `dialect` is supplied, any
+     * adapter warnings (downcast, dropped) are appended here verbatim. Allows
+     * call sites to thread companion warnings into the same `warnings[]` array
+     * the tool surfaces in its envelope.
+     */
+    warnings?: string[];
 }
+/** Stable error code surfaced by BrapiClient when the dialect adapter dropped every supplied filter. */
+export declare const DIALECT_ALL_DROPPED_REASON: "dialect_all_filters_dropped";
 /**
  * POST /search/{noun} returns either full results inline, or a
  * `searchResultsDbId` that the caller polls via getSearchResults.

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	@@ -1 +1 @@
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1	+ {"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../../src/services/brapi-client/types.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,mCAAmC,CAAC;AAEtE,2CAA2C;AAC3C,MAAM,WAAW,aAAa,CAAC,CAAC;IAC9B,QAAQ,EAAE,aAAa,CAAC;IACxB,MAAM,EAAE,CAAC,CAAC;CACX;AAED,MAAM,WAAW,aAAa;IAC5B,SAAS,CAAC,EAAE,OAAO,EAAE,CAAC;IACtB,UAAU,CAAC,EAAE,eAAe,CAAC;IAC7B,MAAM,CAAC,EAAE,WAAW,EAAE,CAAC;CACxB;AAED,MAAM,WAAW,eAAe;IAC9B,WAAW,EAAE,MAAM,CAAC;IACpB,QAAQ,EAAE,MAAM,CAAC;IACjB,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,MAAM,WAAW,WAAW;IAC1B,OAAO,EAAE,MAAM,CAAC;IAChB,WAAW,EAAE,MAAM,GAAG,SAAS,GAAG,OAAO,CAAC;CAC3C;AAED;;;;GAIG;AACH,MAAM,MAAM,SAAS,GACjB;IAAE,IAAI,EAAE,MAAM,CAAA;CAAE,GAChB;IAAE,IAAI,EAAE,KAAK,CAAC;IAAC,QAAQ,EAAE,MAAM,CAAC;IAAC,QAAQ,EAAE,MAAM,CAAA;CAAE,GACnD;IAAE,IAAI,EAAE,QAAQ,CAAC;IAAC,QAAQ,EAAE,MAAM,CAAC;IAAC,YAAY,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAA;CAAE,GAC7E;IAAE,IAAI,EAAE,SAAS,CAAC;IAAC,MAAM,EAAE,MAAM,CAAC;IAAC,UAAU,CAAC,EAAE,MAAM,CAAA;CAAE,GACxD;IAAE,IAAI,EAAE,QAAQ,CAAC;IAAC,KAAK,EAAE,MAAM,CAAA;CAAE,CAAC;AAEtC,yDAAyD;AACzD,MAAM,WAAW,YAAY;IAC3B,2DAA2D;IAC3D,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;IACnB,WAAW,EAAE,MAAM,CAAC;CACrB;AAED,MAAM,WAAW,mBAAmB;IAClC,IAAI,CAAC,EAAE,YAAY,CAAC;IACpB;;;;;;OAMG;IACH,OAAO,CAAC,EAAE,YAAY,CAAC;IACvB,8DAA8D;IAC9D,MAAM,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,GAAG,OAAO,GAAG,SAAS,CAAC,MAAM,GAAG,MAAM,CAAC,EAAE,GAAG,SAAS,CAAC,CAAC;IAC9F;;;;OAIG;IACH,gBAAgB,CAAC,EAAE,MAAM,CAAC;IAC1B,2CAA2C;IAC3C,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB;;;;;OAKG;IACH,QAAQ,CAAC,EAAE,MAAM,EAAE,CAAC;CACrB;AAED,wGAAwG;AACxG,eAAO,MAAM,0BAA0B,EAAG,6BAAsC,CAAC;AAEjF;;;GAGG;AACH,MAAM,MAAM,cAAc,CAAC,CAAC,IACxB;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,QAAQ,EAAE,aAAa,CAAC,CAAC,CAAC,CAAA;CAAE,GAC5C;IAAE,IAAI,EAAE,OAAO,CAAC;IAAC,iBAAiB,EAAE,MAAM,CAAA;CAAE,CAAC;AAEjD,mEAAmE;AACnE,MAAM,WAAW,cAAc;IAC7B,KAAK,EAAE,UAAU,CAAC;IAClB,mFAAmF;IACnF,WAAW,EAAE,MAAM,CAAC;CACrB"}

package/dist/services/brapi-client/types.js CHANGED Viewed

@@ -4,5 +4,6 @@
  *
  * @module services/brapi-client/types
  */
-export {};
+/** Stable error code surfaced by BrapiClient when the dialect adapter dropped every supplied filter. */
+export const DIALECT_ALL_DROPPED_REASON = 'dialect_all_filters_dropped';
 //# sourceMappingURL=types.js.map

package/dist/services/brapi-client/types.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"types.js","sourceRoot":"","sources":["../../../src/services/brapi-client/types.ts"],"names":[],"mappings":"AAAA;;;;;GAKG"}
1	+ {"version":3,"file":"types.js","sourceRoot":"","sources":["../../../src/services/brapi-client/types.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AA6EH,wGAAwG;AACxG,MAAM,CAAC,MAAM,0BAA0B,GAAG,6BAAsC,CAAC"}

package/dist/services/brapi-dialect/brapi-test-dialect.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"brapi-test-dialect.d.ts","sourceRoot":"","sources":["../../../src/services/brapi-dialect/brapi-test-dialect.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;GAqBG;~~AAuHH~~,eAAO,MAAM,gBAAgB,mCAU3B,CAAC"}
1	+ {"version":3,"file":"brapi-test-dialect.d.ts","sourceRoot":"","sources":["../../../src/services/brapi-dialect/brapi-test-dialect.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;GAqBG;AAgIH,eAAO,MAAM,gBAAgB,mCAU3B,CAAC"}

package/dist/services/brapi-dialect/brapi-test-dialect.js CHANGED Viewed

@@ -74,6 +74,15 @@ const PLURAL_TO_SINGULAR = {
         programDbIds: 'programDbId',
         trialDbIds: 'trialDbId',
     },
+    observationunits: {
+        studyDbIds: 'studyDbId',
+        germplasmDbIds: 'germplasmDbId',
+        observationUnitDbIds: 'observationUnitDbId',
+        programDbIds: 'programDbId',
+        trialDbIds: 'trialDbId',
+        locationDbIds: 'locationDbId',
+        seasonDbIds: 'seasonDbId',
+    },
     locations: {
         locationDbIds: 'locationDbId', // observed: works
         locationNames: 'locationName',

package/dist/services/brapi-dialect/brapi-test-dialect.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"brapi-test-dialect.js","sourceRoot":"","sources":["../../../src/services/brapi-dialect/brapi-test-dialect.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;GAqBG;AAEH,OAAO,EAAE,0BAA0B,EAAE,MAAM,4BAA4B,CAAC;AAExE;;;;;;;;GAQG;AACH,MAAM,kBAAkB,GAAqD;IAC3E,OAAO,EAAE;QACP,UAAU,EAAE,WAAW,EAAE,kBAAkB;QAC3C,UAAU,EAAE,WAAW;QACvB,UAAU,EAAE,WAAW;QACvB,eAAe,EAAE,gBAAgB;QACjC,YAAY,EAAE,aAAa,EAAE,kBAAkB;QAC/C,YAAY,EAAE,aAAa;QAC3B,UAAU,EAAE,WAAW,EAAE,kBAAkB;QAC3C,UAAU,EAAE,WAAW;QACvB,aAAa,EAAE,cAAc,EAAE,kBAAkB;QACjD,aAAa,EAAE,cAAc;QAC7B,WAAW,EAAE,YAAY;QACzB,cAAc,EAAE,eAAe,EAAE,kBAAkB;QACnD,UAAU,EAAE,WAAW;QACvB,SAAS,EAAE,UAAU;QACrB,oBAAoB,EAAE,qBAAqB;QAC3C,wBAAwB,EAAE,yBAAyB;KACpD;IACD,SAAS,EAAE;QACT,cAAc,EAAE,eAAe,EAAE,kBAAkB;QACnD,cAAc,EAAE,eAAe;QAC/B,aAAa,EAAE,cAAc;QAC7B,gBAAgB,EAAE,iBAAiB;QACnC,eAAe,EAAE,gBAAgB,EAAE,kBAAkB;QACrD,WAAW,EAAE,YAAY;QACzB,QAAQ,EAAE,SAAS;QACnB,YAAY,EAAE,aAAa;QAC3B,UAAU,EAAE,WAAW;QACvB,UAAU,EAAE,WAAW;QACvB,oBAAoB,EAAE,qBAAqB;KAC5C;IACD,YAAY,EAAE;QACZ,yEAAyE;QACzE,oEAAoE;QACpE,wEAAwE;QACxE,cAAc,EAAE,eAAe,EAAE,kBAAkB;QACnD,wBAAwB,EAAE,yBAAyB,EAAE,kBAAkB;QACvE,oBAAoB,EAAE,qBAAqB,EAAE,kBAAkB;QAC/D,gBAAgB,EAAE,iBAAiB,EAAE,kBAAkB;QACvD,WAAW,EAAE,YAAY;QACzB,YAAY,EAAE,aAAa;QAC3B,UAAU,EAAE,WAAW;KACxB;IACD,SAAS,EAAE;QACT,aAAa,EAAE,cAAc,EAAE,kBAAkB;QACjD,aAAa,EAAE,cAAc;QAC7B,YAAY,EAAE,aAAa;QAC3B,aAAa,EAAE,cAAc;QAC7B,aAAa,EAAE,cAAc;KAC9B;IACD,SAAS,EAAE;QACT,wBAAwB,EAAE,yBAAyB,EAAE,kBAAkB;QACvE,wBAAwB,EAAE,yBAAyB;QACnD,uBAAuB,EAAE,wBAAwB;QACjD,YAAY,EAAE,YAAY;QAC1B,WAAW,EAAE,YAAY;QACzB,UAAU,EAAE,WAAW;QACvB,aAAa,EAAE,cAAc;KAC9B;IACD,MAAM,EAAE;QACN,UAAU,EAAE,WAAW;QACvB,oBAAoB,EAAE,qBAAqB;QAC3C,gBAAgB,EAAE,iBAAiB;QACnC,UAAU,EAAE,WAAW;QACvB,cAAc,EAAE,eAAe;QAC/B,SAAS,EAAE,UAAU;QACrB,wBAAwB,EAAE,yBAAyB;KACpD;IACD,QAAQ,EAAE;QACR,eAAe,EAAE,gBAAgB;QACjC,YAAY,EAAE,aAAa;QAC3B,cAAc,EAAE,eAAe;KAChC;IACD,MAAM,EAAE;QACN,eAAe,EAAE,gBAAgB;QACjC,YAAY,EAAE,aAAa;QAC3B,UAAU,EAAE,WAAW;QACvB,UAAU,EAAE,WAAW;KACxB;IACD,QAAQ,EAAE;QACR,eAAe,EAAE,gBAAgB;QACjC,YAAY,EAAE,aAAa;QAC3B,YAAY,EAAE,aAAa;KAC5B;CACF,CAAC;AAEF;;;;;;;;;;;;;GAaG;AACH,MAAM,eAAe,GAAwC;IAC3D,SAAS,EAAE,IAAI,GAAG,CAAC,CAAC,YAAY,CAAC,CAAC;IAClC,YAAY,EAAE,IAAI,GAAG,CAAC,CAAC,mBAAmB,EAAE,kBAAkB,EAAE,YAAY,EAAE,WAAW,CAAC,CAAC;CAC5F,CAAC;AAEF,MAAM,CAAC,MAAM,gBAAgB,GAAG,0BAA0B,CAAC;IACzD,EAAE,EAAE,YAAY;IAChB,KAAK,EAAE,6BAA6B;IACpC,gBAAgB,EAAE,kBAAkB;IACpC,cAAc,EAAE,eAAe;IAC/B,KAAK,EAAE;QACL,yVAAyV;QACzV,uVAAuV;QACvV,iMAAiM;KAClM;CACF,CAAC,CAAC"}
1	+ {"version":3,"file":"brapi-test-dialect.js","sourceRoot":"","sources":["../../../src/services/brapi-dialect/brapi-test-dialect.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;GAqBG;AAEH,OAAO,EAAE,0BAA0B,EAAE,MAAM,4BAA4B,CAAC;AAExE;;;;;;;;GAQG;AACH,MAAM,kBAAkB,GAAqD;IAC3E,OAAO,EAAE;QACP,UAAU,EAAE,WAAW,EAAE,kBAAkB;QAC3C,UAAU,EAAE,WAAW;QACvB,UAAU,EAAE,WAAW;QACvB,eAAe,EAAE,gBAAgB;QACjC,YAAY,EAAE,aAAa,EAAE,kBAAkB;QAC/C,YAAY,EAAE,aAAa;QAC3B,UAAU,EAAE,WAAW,EAAE,kBAAkB;QAC3C,UAAU,EAAE,WAAW;QACvB,aAAa,EAAE,cAAc,EAAE,kBAAkB;QACjD,aAAa,EAAE,cAAc;QAC7B,WAAW,EAAE,YAAY;QACzB,cAAc,EAAE,eAAe,EAAE,kBAAkB;QACnD,UAAU,EAAE,WAAW;QACvB,SAAS,EAAE,UAAU;QACrB,oBAAoB,EAAE,qBAAqB;QAC3C,wBAAwB,EAAE,yBAAyB;KACpD;IACD,SAAS,EAAE;QACT,cAAc,EAAE,eAAe,EAAE,kBAAkB;QACnD,cAAc,EAAE,eAAe;QAC/B,aAAa,EAAE,cAAc;QAC7B,gBAAgB,EAAE,iBAAiB;QACnC,eAAe,EAAE,gBAAgB,EAAE,kBAAkB;QACrD,WAAW,EAAE,YAAY;QACzB,QAAQ,EAAE,SAAS;QACnB,YAAY,EAAE,aAAa;QAC3B,UAAU,EAAE,WAAW;QACvB,UAAU,EAAE,WAAW;QACvB,oBAAoB,EAAE,qBAAqB;KAC5C;IACD,YAAY,EAAE;QACZ,yEAAyE;QACzE,oEAAoE;QACpE,wEAAwE;QACxE,cAAc,EAAE,eAAe,EAAE,kBAAkB;QACnD,wBAAwB,EAAE,yBAAyB,EAAE,kBAAkB;QACvE,oBAAoB,EAAE,qBAAqB,EAAE,kBAAkB;QAC/D,gBAAgB,EAAE,iBAAiB,EAAE,kBAAkB;QACvD,WAAW,EAAE,YAAY;QACzB,YAAY,EAAE,aAAa;QAC3B,UAAU,EAAE,WAAW;KACxB;IACD,gBAAgB,EAAE;QAChB,UAAU,EAAE,WAAW;QACvB,cAAc,EAAE,eAAe;QAC/B,oBAAoB,EAAE,qBAAqB;QAC3C,YAAY,EAAE,aAAa;QAC3B,UAAU,EAAE,WAAW;QACvB,aAAa,EAAE,cAAc;QAC7B,WAAW,EAAE,YAAY;KAC1B;IACD,SAAS,EAAE;QACT,aAAa,EAAE,cAAc,EAAE,kBAAkB;QACjD,aAAa,EAAE,cAAc;QAC7B,YAAY,EAAE,aAAa;QAC3B,aAAa,EAAE,cAAc;QAC7B,aAAa,EAAE,cAAc;KAC9B;IACD,SAAS,EAAE;QACT,wBAAwB,EAAE,yBAAyB,EAAE,kBAAkB;QACvE,wBAAwB,EAAE,yBAAyB;QACnD,uBAAuB,EAAE,wBAAwB;QACjD,YAAY,EAAE,YAAY;QAC1B,WAAW,EAAE,YAAY;QACzB,UAAU,EAAE,WAAW;QACvB,aAAa,EAAE,cAAc;KAC9B;IACD,MAAM,EAAE;QACN,UAAU,EAAE,WAAW;QACvB,oBAAoB,EAAE,qBAAqB;QAC3C,gBAAgB,EAAE,iBAAiB;QACnC,UAAU,EAAE,WAAW;QACvB,cAAc,EAAE,eAAe;QAC/B,SAAS,EAAE,UAAU;QACrB,wBAAwB,EAAE,yBAAyB;KACpD;IACD,QAAQ,EAAE;QACR,eAAe,EAAE,gBAAgB;QACjC,YAAY,EAAE,aAAa;QAC3B,cAAc,EAAE,eAAe;KAChC;IACD,MAAM,EAAE;QACN,eAAe,EAAE,gBAAgB;QACjC,YAAY,EAAE,aAAa;QAC3B,UAAU,EAAE,WAAW;QACvB,UAAU,EAAE,WAAW;KACxB;IACD,QAAQ,EAAE;QACR,eAAe,EAAE,gBAAgB;QACjC,YAAY,EAAE,aAAa;QAC3B,YAAY,EAAE,aAAa;KAC5B;CACF,CAAC;AAEF;;;;;;;;;;;;;GAaG;AACH,MAAM,eAAe,GAAwC;IAC3D,SAAS,EAAE,IAAI,GAAG,CAAC,CAAC,YAAY,CAAC,CAAC;IAClC,YAAY,EAAE,IAAI,GAAG,CAAC,CAAC,mBAAmB,EAAE,kBAAkB,EAAE,YAAY,EAAE,WAAW,CAAC,CAAC;CAC5F,CAAC;AAEF,MAAM,CAAC,MAAM,gBAAgB,GAAG,0BAA0B,CAAC;IACzD,EAAE,EAAE,YAAY;IAChB,KAAK,EAAE,6BAA6B;IACpC,gBAAgB,EAAE,kBAAkB;IACpC,cAAc,EAAE,eAAe;IAC/B,KAAK,EAAE;QACL,yVAAyV;QACzV,uVAAuV;QACvV,iMAAiM;KAClM;CACF,CAAC,CAAC"}

package/dist/services/brapi-dialect/cassavabase-dialect.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"cassavabase-dialect.d.ts","sourceRoot":"","sources":["../../../src/services/brapi-dialect/cassavabase-dialect.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;AAGH,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,YAAY,CAAC;~~AA2J~~/C,eAAO,MAAM,kBAAkB,cAAuD,CAAC;AAEvF,eAAO,MAAM,gBAAgB,cAAuD,CAAC"}
1	+ {"version":3,"file":"cassavabase-dialect.d.ts","sourceRoot":"","sources":["../../../src/services/brapi-dialect/cassavabase-dialect.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;AAGH,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,YAAY,CAAC;AAqK/C,eAAO,MAAM,kBAAkB,cAAuD,CAAC;AAEvF,eAAO,MAAM,gBAAgB,cAAuD,CAAC"}

package/dist/services/brapi-dialect/cassavabase-dialect.js CHANGED Viewed

@@ -77,6 +77,16 @@ const PLURAL_TO_SINGULAR = {
         trialDbIds: 'trialDbId',
         observationLevels: 'observationLevel',
     },
+    observationunits: {
+        studyDbIds: 'studyDbId',
+        germplasmDbIds: 'germplasmDbId',
+        observationUnitDbIds: 'observationUnitDbId',
+        programDbIds: 'programDbId',
+        trialDbIds: 'trialDbId',
+        locationDbIds: 'locationDbId',
+        seasonDbIds: 'seasonDbId',
+        observationLevels: 'observationLevel',
+    },
     locations: {
         locationDbIds: 'locationDbId',
         locationNames: 'locationName',

package/dist/services/brapi-dialect/cassavabase-dialect.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/services/reference-data-cache/reference-data-cache.d.ts CHANGED Viewed

@@ -10,8 +10,21 @@
 import type { Context } from '@cyanheads/mcp-ts-core';
 import type { ServerConfig } from '../../config/server-config.js';
 import { type BrapiClient, type BrapiRequestOptions } from '../../services/brapi-client/index.js';
+import type { BrapiDialect } from '../../services/brapi-dialect/index.js';
 import type { Location, Program, Trial } from './types.js';
-export type ReferenceLookupOptions = Pick<BrapiRequestOptions, 'auth'>;
+export interface ReferenceLookupOptions {
+    auth?: BrapiRequestOptions['auth'];
+    /**
+     * Active dialect for the connection. Threaded through to the BrapiClient so
+     * the v2.1 plural ID filter (`trialDbIds`, `programDbIds`, …) is translated
+     * to the singular form servers like CassavaBase honor. Without this, the
+     * filter is silently ignored upstream and the response carries an arbitrary
+     * page-zero row instead of the requested record.
+     */
+    dialect?: BrapiDialect;
+    /** Optional warnings sink — receives any dialect-translation warnings. */
+    warnings?: string[];
+}
 export declare class ReferenceDataCache {
     private readonly serverConfig;
     private readonly client;

package/dist/services/reference-data-cache/reference-data-cache.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"reference-data-cache.d.ts","sourceRoot":"","sources":["../../../src/services/reference-data-cache/reference-data-cache.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AACtD,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,2BAA2B,CAAC;AAC9D,OAAO,EACL,KAAK,WAAW,EAEhB,KAAK,mBAAmB,~~EAEzB~~,MAAM,kCAAkC,CAAC;AAC1C,OAAO,KAAK,EAAE,QAAQ,EAAE,OAAO,EAAE,KAAK,EAAE,MAAM,YAAY,CAAC;AAE3D,MAAM,~~MAAM~~,sBAAsB,~~GAAG,~~IAAI,CAAC,mBAAmB,~~EAAE~~,MAAM,CAAC,CAAC;~~AA8BvE~~,qBAAa,kBAAkB;IAE3B,OAAO,CAAC,QAAQ,CAAC,YAAY;IAC7B,OAAO,CAAC,QAAQ,CAAC,MAAM;gBADN,YAAY,EAAE,YAAY,EAC1B,MAAM,GAAE,MAAM,WAA4B;IAG7D,WAAW,CACT,OAAO,EAAE,MAAM,EACf,YAAY,EAAE,SAAS,MAAM,EAAE,EAC/B,GAAG,EAAE,OAAO,EACZ,OAAO,CAAC,EAAE,sBAAsB,GAC/B,OAAO,CAAC,GAAG,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IAIhC,SAAS,CACP,OAAO,EAAE,MAAM,EACf,UAAU,EAAE,SAAS,MAAM,EAAE,EAC7B,GAAG,EAAE,OAAO,EACZ,OAAO,CAAC,EAAE,sBAAsB,GAC/B,OAAO,CAAC,GAAG,CAAC,MAAM,EAAE,KAAK,CAAC,CAAC;IAI9B,YAAY,CACV,OAAO,EAAE,MAAM,EACf,aAAa,EAAE,SAAS,MAAM,EAAE,EAChC,GAAG,EAAE,OAAO,EACZ,OAAO,CAAC,EAAE,sBAAsB,GAC/B,OAAO,CAAC,GAAG,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAC;IAIjC,yEAAyE;IACnE,UAAU,CAAC,OAAO,EAAE,MAAM,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,IAAI,CAAC;YAShD,YAAY;YAsCZ,UAAU;~~YAoBV~~,YAAY;CAY3B;AAiBD,wBAAgB,sBAAsB,CAAC,YAAY,EAAE,YAAY,GAAG,IAAI,CAEvE;AAED,wBAAgB,qBAAqB,IAAI,kBAAkB,CAO1D;AAED,wBAAgB,uBAAuB,IAAI,IAAI,CAE9C"}
1	+ {"version":3,"file":"reference-data-cache.d.ts","sourceRoot":"","sources":["../../../src/services/reference-data-cache/reference-data-cache.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AACtD,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,2BAA2B,CAAC;AAC9D,OAAO,EACL,KAAK,WAAW,EAEhB,KAAK,mBAAmB,EAGzB,MAAM,kCAAkC,CAAC;AAC1C,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,mCAAmC,CAAC;AACtE,OAAO,KAAK,EAAE,QAAQ,EAAE,OAAO,EAAE,KAAK,EAAE,MAAM,YAAY,CAAC;AAE3D,MAAM,WAAW,sBAAsB;IACrC,IAAI,CAAC,EAAE,mBAAmB,CAAC,MAAM,CAAC,CAAC;IACnC;;;;;;OAMG;IACH,OAAO,CAAC,EAAE,YAAY,CAAC;IACvB,0EAA0E;IAC1E,QAAQ,CAAC,EAAE,MAAM,EAAE,CAAC;CACrB;AA8BD,qBAAa,kBAAkB;IAE3B,OAAO,CAAC,QAAQ,CAAC,YAAY;IAC7B,OAAO,CAAC,QAAQ,CAAC,MAAM;gBADN,YAAY,EAAE,YAAY,EAC1B,MAAM,GAAE,MAAM,WAA4B;IAG7D,WAAW,CACT,OAAO,EAAE,MAAM,EACf,YAAY,EAAE,SAAS,MAAM,EAAE,EAC/B,GAAG,EAAE,OAAO,EACZ,OAAO,CAAC,EAAE,sBAAsB,GAC/B,OAAO,CAAC,GAAG,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IAIhC,SAAS,CACP,OAAO,EAAE,MAAM,EACf,UAAU,EAAE,SAAS,MAAM,EAAE,EAC7B,GAAG,EAAE,OAAO,EACZ,OAAO,CAAC,EAAE,sBAAsB,GAC/B,OAAO,CAAC,GAAG,CAAC,MAAM,EAAE,KAAK,CAAC,CAAC;IAI9B,YAAY,CACV,OAAO,EAAE,MAAM,EACf,aAAa,EAAE,SAAS,MAAM,EAAE,EAChC,GAAG,EAAE,OAAO,EACZ,OAAO,CAAC,EAAE,sBAAsB,GAC/B,OAAO,CAAC,GAAG,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAC;IAIjC,yEAAyE;IACnE,UAAU,CAAC,OAAO,EAAE,MAAM,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,IAAI,CAAC;YAShD,YAAY;YAsCZ,UAAU;YAsCV,YAAY;CAY3B;AAiBD,wBAAgB,sBAAsB,CAAC,YAAY,EAAE,YAAY,GAAG,IAAI,CAEvE;AAED,wBAAgB,qBAAqB,IAAI,kBAAkB,CAO1D;AAED,wBAAgB,uBAAuB,IAAI,IAAI,CAE9C"}

package/dist/services/reference-data-cache/reference-data-cache.js CHANGED Viewed

@@ -7,7 +7,7 @@
  *
  * @module services/reference-data-cache/reference-data-cache
  */
-import { getBrapiClient, } from '../../services/brapi-client/index.js';
+import { getBrapiClient, isDialectAllDropped, } from '../../services/brapi-client/index.js';
 const PROGRAM_CFG = {
     endpoint: '/programs',
     idFilter: 'programDbIds',
@@ -83,11 +83,30 @@ export class ReferenceDataCache {
     async fetchBatch(cfg, baseUrl, ids, ctx, options) {
         const requestOptions = {
             params: { [cfg.idFilter]: ids, pageSize: ids.length },
+            timeoutMs: this.serverConfig.companionTimeoutMs,
+            retryMaxAttempts: 0,
         };
         if (options.auth)
             requestOptions.auth = options.auth;
-        const env = await this.client().get(baseUrl, cfg.endpoint, ctx, requestOptions);
-        return extractDataArray(env);
+        if (options.dialect)
+            requestOptions.dialect = options.dialect;
+        if (options.warnings)
+            requestOptions.warnings = options.warnings;
+        try {
+            const env = await this.client().get(baseUrl, cfg.endpoint, ctx, requestOptions);
+            return extractDataArray(env);
+        }
+        catch (err) {
+            if (isDialectAllDropped(err)) {
+                // The dialect dropped every plural ID filter and there's no singular
+                // alias on this server — surface a warning and return empty so the
+                // caller treats the FK as unavailable instead of receiving a page-zero
+                // row keyed off the wrong ID.
+                options.warnings?.push(`Reference lookup ${cfg.endpoint} skipped: active dialect drops every supported ID filter; FK enrichment unavailable.`);
+                return [];
+            }
+            throw err;
+        }
     }
     async deletePrefix(ctx, prefix) {
         let cursor;

package/dist/services/reference-data-cache/reference-data-cache.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/package.json CHANGED Viewed

@@ -1,7 +1,7 @@
 {
   "name": "@cyanheads/brapi-mcp-server",
   "mcpName": "io.github.cyanheads/brapi-mcp-server",
-  "version": "0.4.6",
+  "version": "0.4.7",
   "description": "BrAPI v2.1 MCP server — studies, germplasm, observations, genotypes, images, and pedigrees.",
   "author": "Casey Hand @cyanheads (https://github.com/cyanheads/brapi-mcp-server#readme)",
   "type": "module",