npm - @cyanheads/brapi-mcp-server - Versions diffs - 0.4.1 → 0.4.3 - Mend

@cyanheads/brapi-mcp-server 0.4.1 → 0.4.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (39) hide show

package/dist/mcp-server/tools/definitions/brapi-get-germplasm.tool.js CHANGED Viewed

@@ -9,6 +9,7 @@
 import { tool, z } from '@cyanheads/mcp-ts-core';
 import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
 import { getBrapiClient } from '../../../services/brapi-client/index.js';
+import { resolveDialect } from '../../../services/brapi-dialect/index.js';
 import { getCapabilityRegistry } from '../../../services/capability-registry/index.js';
 import { DEFAULT_ALIAS, getServerRegistry } from '../../../services/server-registry/index.js';
 import { AliasInput, buildRequestOptions, isUpstreamNotFound } from '../shared/find-helpers.js';
@@ -146,6 +147,9 @@ export const brapiGetGermplasm = tool('brapi_get_germplasm', {
         const supportsAttributes = Boolean(profile.supported['germplasm/{germplasmDbId}/attributes']);
         const supportsProgeny = Boolean(profile.supported['germplasm/{germplasmDbId}/progeny']);
         const supportsStudies = profile.supported.studies?.methods?.includes('GET') ?? false;
+        const dialect = supportsStudies
+            ? await resolveDialect(connection, ctx, capabilityLookup)
+            : undefined;
         const [pedigree, attributes, studyCount, progenyCount] = await Promise.all([
             supportsPedigree
                 ? fetchPedigree(client, connection.baseUrl, id, ctx, buildRequestOptions(connection)).catch((err) => recordWarning(warnings, 'pedigree lookup failed', err))
@@ -153,11 +157,15 @@ export const brapiGetGermplasm = tool('brapi_get_germplasm', {
             supportsAttributes
                 ? fetchAttributes(client, connection.baseUrl, id, ctx, buildRequestOptions(connection)).catch((err) => recordWarning(warnings, 'attributes lookup failed', err))
                 : Promise.resolve(undefined),
-            supportsStudies
-                ? fetchTotalCount(client, connection.baseUrl, '/studies', ctx, buildRequestOptions(connection, {
-                    germplasmDbIds: [input.germplasmDbId],
-                    pageSize: 1,
-                })).catch((err) => recordWarning(warnings, 'study count probe failed', err))
+            supportsStudies && dialect
+                ? fetchValidatedStudyCount({
+                    client,
+                    connection,
+                    germplasmDbId: input.germplasmDbId,
+                    dialect,
+                    ctx,
+                    warnings,
+                }).catch((err) => recordWarning(warnings, 'study count probe failed', err))
                 : Promise.resolve(undefined),
             supportsProgeny
                 ? fetchTotalCount(client, connection.baseUrl, `/germplasm/${id}/progeny`, ctx, buildRequestOptions(connection, { pageSize: 1 })).catch((err) => recordWarning(warnings, 'progeny count probe failed', err))
@@ -303,4 +311,44 @@ async function fetchTotalCount(client, baseUrl, path, ctx, options) {
     const total = env.metadata?.pagination?.totalCount;
     return typeof total === 'number' ? total : undefined;
 }
+/**
+ * Probe `/studies?germplasmDbIds=X` and a parallel unfiltered baseline.
+ * Some servers (notably the SGN family) silently drop the germplasm filter on
+ * `/studies` and return the global studies total — which would be wildly
+ * misleading as a per-germplasm `studyCount`. The cross-check catches that:
+ * if the filtered total matches the unfiltered baseline, the filter was
+ * ignored and we drop the count rather than report a misleading global.
+ *
+ * Routes the filtered probe through the dialect adapter so any per-server
+ * key translation (or filter drop) takes effect, and surfaces the dialect's
+ * own warnings so the agent sees why a count is missing.
+ */
+async function fetchValidatedStudyCount(input) {
+    const { client, connection, ctx, dialect, germplasmDbId, warnings } = input;
+    const adapted = dialect.adaptGetFilters('studies', {
+        germplasmDbIds: [germplasmDbId],
+    });
+    warnings.push(...adapted.warnings);
+    // If the dialect dropped the filter entirely, the count would be the
+    // global studies total — useless. Skip and let the caller render `—`.
+    if (Object.keys(adapted.filters).length === 0) {
+        warnings.push('studyCount probe skipped: the active dialect dropped the germplasm filter for /studies (server does not honor it).');
+        return;
+    }
+    const filteredParams = {
+        ...adapted.filters,
+        pageSize: 1,
+    };
+    const [filtered, baseline] = await Promise.all([
+        fetchTotalCount(client, connection.baseUrl, '/studies', ctx, buildRequestOptions(connection, filteredParams)),
+        fetchTotalCount(client, connection.baseUrl, '/studies', ctx, buildRequestOptions(connection, { pageSize: 1 })).catch(() => undefined),
+    ]);
+    if (typeof filtered !== 'number')
+        return;
+    if (typeof baseline === 'number' && baseline > 0 && filtered === baseline) {
+        warnings.push(`studyCount omitted: /studies returned the same total (${baseline}) for both the germplasm-filtered probe and an unfiltered baseline — the upstream silently ignored the germplasm filter, so a per-germplasm count cannot be trusted.`);
+        return;
+    }
+    return filtered;
+}
 //# sourceMappingURL=brapi-get-germplasm.tool.js.map

package/dist/mcp-server/tools/definitions/brapi-get-germplasm.tool.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/mcp-server/tools/definitions/index.d.ts CHANGED Viewed

@@ -294,25 +294,25 @@ export declare const readOnlyToolDefinitions: (import("@cyanheads/mcp-ts-core").
 }, import("zod/v4/core").$strip>, import("zod").ZodObject<{
     alias: import("zod").ZodString;
     results: import("zod").ZodArray<import("zod").ZodObject<{
-        callSetDbId: import("zod").ZodOptional<import("zod").ZodString>;
-        callSetName: import("zod").ZodOptional<import("zod").ZodString>;
-        variantDbId: import("zod").ZodOptional<import("zod").ZodString>;
-        variantName: import("zod").ZodOptional<import("zod").ZodString>;
-        variantSetDbId: import("zod").ZodOptional<import("zod").ZodString>;
-        genotype: import("zod").ZodOptional<import("zod").ZodObject<{
-            values: import("zod").ZodOptional<import("zod").ZodArray<import("zod").ZodString>>;
-        }, import("zod/v4/core").$loose>>;
-        genotypeValue: import("zod").ZodOptional<import("zod").ZodString>;
-        phaseSet: import("zod").ZodOptional<import("zod").ZodString>;
+        callSetDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        callSetName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        variantDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        variantName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        variantSetDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        genotype: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodObject<{
+            values: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodArray<import("zod").ZodString>>>;
+        }, import("zod/v4/core").$loose>>>;
+        genotypeValue: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        phaseSet: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
     }, import("zod/v4/core").$loose>>;
     returnedCount: import("zod").ZodNumber;
     totalCount: import("zod").ZodNumber;
     hasMore: import("zod").ZodBoolean;
     callFormatting: import("zod").ZodObject<{
-        expandHomozygotes: import("zod").ZodOptional<import("zod").ZodBoolean>;
-        unknownString: import("zod").ZodOptional<import("zod").ZodString>;
-        sepPhased: import("zod").ZodOptional<import("zod").ZodString>;
-        sepUnphased: import("zod").ZodOptional<import("zod").ZodString>;
+        expandHomozygotes: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodBoolean>>;
+        unknownString: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        sepPhased: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        sepUnphased: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
     }, import("zod/v4/core").$strip>;
     distributions: import("zod").ZodObject<{
         callSetName: import("zod").ZodRecord<import("zod").ZodString, import("zod").ZodNumber>;
@@ -418,22 +418,22 @@ export declare const readOnlyToolDefinitions: (import("@cyanheads/mcp-ts-core").
     alias: import("zod").ZodString;
     results: import("zod").ZodArray<import("zod").ZodObject<{
         imageDbId: import("zod").ZodString;
-        imageName: import("zod").ZodOptional<import("zod").ZodString>;
-        imageFileName: import("zod").ZodOptional<import("zod").ZodString>;
-        imageFileSize: import("zod").ZodOptional<import("zod").ZodNumber>;
-        imageHeight: import("zod").ZodOptional<import("zod").ZodNumber>;
-        imageWidth: import("zod").ZodOptional<import("zod").ZodNumber>;
-        mimeType: import("zod").ZodOptional<import("zod").ZodString>;
-        imageTimeStamp: import("zod").ZodOptional<import("zod").ZodString>;
-        imageURL: import("zod").ZodOptional<import("zod").ZodString>;
-        observationUnitDbId: import("zod").ZodOptional<import("zod").ZodString>;
-        observationUnitName: import("zod").ZodOptional<import("zod").ZodString>;
-        observationDbIds: import("zod").ZodOptional<import("zod").ZodArray<import("zod").ZodString>>;
-        studyDbId: import("zod").ZodOptional<import("zod").ZodString>;
-        studyName: import("zod").ZodOptional<import("zod").ZodString>;
-        descriptiveOntologyTerms: import("zod").ZodOptional<import("zod").ZodArray<import("zod").ZodString>>;
-        copyright: import("zod").ZodOptional<import("zod").ZodString>;
-        description: import("zod").ZodOptional<import("zod").ZodString>;
+        imageName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        imageFileName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        imageFileSize: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodNumber>>;
+        imageHeight: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodNumber>>;
+        imageWidth: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodNumber>>;
+        mimeType: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        imageTimeStamp: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        imageURL: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        observationUnitDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        observationUnitName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        observationDbIds: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodArray<import("zod").ZodString>>>;
+        studyDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        studyName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        descriptiveOntologyTerms: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodArray<import("zod").ZodString>>>;
+        copyright: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        description: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
     }, import("zod/v4/core").$loose>>;
     returnedCount: import("zod").ZodNumber;
     totalCount: import("zod").ZodNumber;
@@ -531,26 +531,26 @@ export declare const readOnlyToolDefinitions: (import("@cyanheads/mcp-ts-core").
 }, import("zod/v4/core").$strip>, import("zod").ZodObject<{
     alias: import("zod").ZodString;
     results: import("zod").ZodArray<import("zod").ZodObject<{
-        observationDbId: import("zod").ZodOptional<import("zod").ZodString>;
-        observationUnitDbId: import("zod").ZodOptional<import("zod").ZodString>;
-        observationUnitName: import("zod").ZodOptional<import("zod").ZodString>;
-        observationVariableDbId: import("zod").ZodOptional<import("zod").ZodString>;
-        observationVariableName: import("zod").ZodOptional<import("zod").ZodString>;
-        studyDbId: import("zod").ZodOptional<import("zod").ZodString>;
-        studyName: import("zod").ZodOptional<import("zod").ZodString>;
-        germplasmDbId: import("zod").ZodOptional<import("zod").ZodString>;
-        germplasmName: import("zod").ZodOptional<import("zod").ZodString>;
-        observationLevel: import("zod").ZodOptional<import("zod").ZodString>;
-        season: import("zod").ZodOptional<import("zod").ZodUnion<readonly [import("zod").ZodString, import("zod").ZodObject<{
-            seasonDbId: import("zod").ZodOptional<import("zod").ZodString>;
-            year: import("zod").ZodOptional<import("zod").ZodUnion<readonly [import("zod").ZodString, import("zod").ZodNumber]>>;
-            season: import("zod").ZodOptional<import("zod").ZodString>;
-            seasonName: import("zod").ZodOptional<import("zod").ZodString>;
-        }, import("zod/v4/core").$loose>]>>;
-        value: import("zod").ZodOptional<import("zod").ZodString>;
-        observationTimeStamp: import("zod").ZodOptional<import("zod").ZodString>;
-        collector: import("zod").ZodOptional<import("zod").ZodString>;
-        uploadedBy: import("zod").ZodOptional<import("zod").ZodString>;
+        observationDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        observationUnitDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        observationUnitName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        observationVariableDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        observationVariableName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        studyDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        studyName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        germplasmDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        germplasmName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        observationLevel: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        season: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodUnion<readonly [import("zod").ZodString, import("zod").ZodObject<{
+            seasonDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+            year: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodUnion<readonly [import("zod").ZodString, import("zod").ZodNumber]>>>;
+            season: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+            seasonName: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        }, import("zod/v4/core").$loose>]>>>;
+        value: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        observationTimeStamp: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        collector: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
+        uploadedBy: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
     }, import("zod/v4/core").$loose>>;
     returnedCount: import("zod").ZodNumber;
     totalCount: import("zod").ZodNumber;
@@ -720,9 +720,9 @@ export declare const readOnlyToolDefinitions: (import("@cyanheads/mcp-ts-core").
     alias: import("zod").ZodString;
     results: import("zod").ZodArray<import("zod").ZodObject<{
         variantDbId: import("zod").ZodString;
-        variantNames: import("zod").ZodOptional<import("zod").ZodArray<import("zod").ZodString>>;
-        variantSetDbId: import("zod").ZodOptional<import("zod").ZodUnion<readonly [import("zod").ZodString, import("zod").ZodArray<import("zod").ZodString>]>>;
-        variantSetDbIds: import("zod").ZodOptional<import("zod").ZodArray<import("zod").ZodString>>;
+        variantNames: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodArray<import("zod").ZodString>>>;
+        variantSetDbId: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodUnion<readonly [import("zod").ZodString, import("zod").ZodArray<import("zod").ZodString>]>>>;
+        variantSetDbIds: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodArray<import("zod").ZodString>>>;
         variantType: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
         referenceBases: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodString>>;
         alternateBases: import("zod").ZodOptional<import("zod").ZodNullable<import("zod").ZodArray<import("zod").ZodString>>>;

package/dist/mcp-server/tools/shared/find-helpers.d.ts CHANGED Viewed

@@ -56,6 +56,7 @@ export declare function renderFindHeader(opts: {
     totalCount: number;
     dataset?: {
         rowCount: number;
+        expiresAt?: string;
     } | undefined;
 }): string;
 /**
@@ -91,6 +92,14 @@ export interface SpillInput<T> {
     firstPage: T[];
     loadLimit: number;
     path: string;
+    /**
+     * Optional client-side predicate applied to every row (first-page + spilled)
+     * before persistence. When present, only rows that pass are persisted to
+     * DatasetStore and returned in `fullRows`. The unfiltered upstream total is
+     * preserved separately on the LoadedRows envelope so distributions and
+     * headers can still report the true upstream size.
+     */
+    rowFilter?: (row: T) => boolean;
     source: string;
     store: DatasetStore;
     /** Total reported by the server on the first page. */
@@ -98,7 +107,7 @@ export interface SpillInput<T> {
 }
 export interface SpillResult<T> {
     dataset: DatasetMetadata;
-    /** All rows that were persisted — used for distributions. */
+    /** Rows that were persisted (post-filter when `rowFilter` was supplied). */
     fullRows: T[];
     pagesFetched: number;
 }
@@ -121,8 +130,16 @@ export type DatasetHandle = z.infer<typeof DatasetHandleSchema>;
 /**
  * Render a DatasetHandle as bullet lines, matching the existing find_* tool
  * format. Centralized so the truncated/maxRows fields surface consistently.
+ * `expiresAt` is paired with a human-readable `expires in Xh / Xd` so the
+ * agent doesn't have to subtract dates to know when the handle goes stale.
  */
 export declare function renderDatasetHandle(handle: DatasetHandle): string[];
+/**
+ * Render an absolute `expiresAt` timestamp as a relative human label
+ * (`expires in 24h`, `expires in 30m`, `expired 5m ago`). Coarsens to the
+ * most useful unit so the value reads at a glance.
+ */
+export declare function formatExpiresIn(expiresAt: string, now?: Date): string;
 /** Project a `DatasetMetadata` to the in-context handle shape. */
 export declare function toDatasetHandle(metadata: DatasetMetadata): DatasetHandle;
 export interface MaybeSpillInput<T> {
@@ -133,12 +150,18 @@ export interface MaybeSpillInput<T> {
     firstPage: LoadedRows<T>;
     loadLimit: number;
     path: string;
+    /**
+     * Optional client-side predicate applied to every row before persistence.
+     * Forwarded to `spillToDataset`. When present and no spillover happens, the
+     * first-page rows are also filtered before being returned.
+     */
+    rowFilter?: (row: T) => boolean;
     source: string;
     store: DatasetStore;
 }
 export interface MaybeSpillResult<T> {
     dataset?: DatasetHandle;
-    /** Full row set if a spillover happened, otherwise the first-page rows. */
+    /** Row set after `rowFilter` (when supplied), spilled or first-page only. */
     fullRows: T[];
 }
 /**
@@ -219,6 +242,14 @@ export interface FilterMatchCheck {
  * is empty (no signal) or where no values were requested.
  */
 export declare function checkFilterMatchRates(warnings: string[], fullRowCount: number, checks: readonly FilterMatchCheck[]): void;
+/**
+ * Build a `FilterMatchCheck` for an FK identifier filter — the user's input
+ * values are compared against a fresh distribution computed over `fieldName`
+ * on the returned rows. Surfaces silently-ignored FK filters as warnings
+ * without polluting the public `result.distributions` shape with raw DbId
+ * frequencies (which carry no semantic meaning to the agent).
+ */
+export declare function fkMatchCheck(paramName: string, requestedValues: readonly (string | number | boolean)[] | undefined, rows: readonly Record<string, unknown>[], fieldName: string): FilterMatchCheck;
 export interface RefinementHintOptions {
     /**
      * Filter parameter names available on the calling tool. Used to suggest

package/dist/mcp-server/tools/shared/find-helpers.d.ts.map CHANGED Viewed

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package/dist/mcp-server/tools/shared/find-helpers.js CHANGED Viewed

@@ -122,7 +122,8 @@ export function computeDistribution(rows, accessor) {
  */
 export function renderFindHeader(opts) {
     if (opts.dataset) {
-        return `# ${opts.returnedCount} returned · ${opts.dataset.rowCount} in dataset · ${opts.totalCount} total ${opts.noun} — \`${opts.alias}\``;
+        const expiry = opts.dataset.expiresAt ? ` (${formatExpiresIn(opts.dataset.expiresAt)})` : '';
+        return `# ${opts.returnedCount} returned · ${opts.dataset.rowCount} in dataset${expiry} · ${opts.totalCount} total ${opts.noun} — \`${opts.alias}\``;
     }
     return `# ${opts.returnedCount} of ${opts.totalCount} ${opts.noun} — \`${opts.alias}\``;
 }
@@ -208,6 +209,8 @@ export const DatasetHandleSchema = z.object({
 /**
  * Render a DatasetHandle as bullet lines, matching the existing find_* tool
  * format. Centralized so the truncated/maxRows fields surface consistently.
+ * `expiresAt` is paired with a human-readable `expires in Xh / Xd` so the
+ * agent doesn't have to subtract dates to know when the handle goes stale.
  */
 export function renderDatasetHandle(handle) {
     const lines = [
@@ -216,7 +219,7 @@ export function renderDatasetHandle(handle) {
         `- sizeBytes: ${handle.sizeBytes}`,
         `- columns: ${handle.columns.join(', ')}`,
         `- createdAt: ${handle.createdAt}`,
-        `- expiresAt: ${handle.expiresAt}`,
+        `- expiresAt: ${handle.expiresAt} (${formatExpiresIn(handle.expiresAt)})`,
     ];
     if (handle.truncated)
         lines.push(`- truncated: true`);
@@ -224,6 +227,31 @@ export function renderDatasetHandle(handle) {
         lines.push(`- maxRows: ${handle.maxRows}`);
     return lines;
 }
+/**
+ * Render an absolute `expiresAt` timestamp as a relative human label
+ * (`expires in 24h`, `expires in 30m`, `expired 5m ago`). Coarsens to the
+ * most useful unit so the value reads at a glance.
+ */
+export function formatExpiresIn(expiresAt, now = new Date()) {
+    const expiry = Date.parse(expiresAt);
+    if (Number.isNaN(expiry))
+        return 'expiry unknown';
+    const deltaMs = expiry - now.getTime();
+    const absMs = Math.abs(deltaMs);
+    const minutes = Math.round(absMs / 60_000);
+    const hours = Math.round(absMs / 3_600_000);
+    const days = Math.round(absMs / 86_400_000);
+    let label;
+    if (absMs < 60_000)
+        label = '<1m';
+    else if (minutes < 60)
+        label = `${minutes}m`;
+    else if (hours < 48)
+        label = `${hours}h`;
+    else
+        label = `${days}d`;
+    return deltaMs >= 0 ? `expires in ${label}` : `expired ${label} ago`;
+}
 /** Project a `DatasetMetadata` to the in-context handle shape. */
 export function toDatasetHandle(metadata) {
     const handle = {
@@ -247,13 +275,14 @@ export function toDatasetHandle(metadata) {
  * union to DatasetStore and returns both the full set and the handle.
  */
 export async function maybeSpill(input) {
-    const { firstPage } = input;
+    const { firstPage, rowFilter } = input;
     if (!firstPage.hasMore ||
         firstPage.totalCount === undefined ||
         firstPage.totalCount <= input.loadLimit) {
-        return { fullRows: firstPage.rows };
+        const rows = rowFilter ? firstPage.rows.filter(rowFilter) : firstPage.rows;
+        return { fullRows: rows };
     }
-    const spill = await spillToDataset({
+    const spillInput = {
         store: input.store,
         client: input.client,
         connection: input.connection,
@@ -264,7 +293,10 @@ export async function maybeSpill(input) {
         ctx: input.ctx,
         firstPage: firstPage.rows,
         totalCount: firstPage.totalCount,
-    });
+    };
+    if (rowFilter)
+        spillInput.rowFilter = rowFilter;
+    const spill = await spillToDataset(spillInput);
     return {
         fullRows: spill.fullRows,
         dataset: toDatasetHandle(spill.dataset),
@@ -302,18 +334,19 @@ export async function spillToDataset(input) {
     const reachedRowCap = rows.length >= remainingTarget && input.totalCount > rows.length;
     const reachedPageCap = pagesFetched >= MAX_SPILLOVER_PAGES && input.totalCount > rows.length;
     const truncated = reachedRowCap || reachedPageCap;
+    const persistedRows = input.rowFilter ? rows.filter(input.rowFilter) : rows;
     const createInput = {
         source: input.source,
         baseUrl: input.connection.baseUrl,
         query: input.filters,
-        rows,
+        rows: persistedRows,
     };
     if (truncated) {
         createInput.truncated = true;
         createInput.maxRows = MAX_SPILLOVER_ROWS;
     }
     const dataset = await input.store.create(input.ctx, createInput);
-    return { dataset, fullRows: rows, pagesFetched };
+    return { dataset, fullRows: persistedRows, pagesFetched };
 }
 export function extractRows(result) {
     if (Array.isArray(result))
@@ -424,6 +457,20 @@ export function checkFilterMatchRates(warnings, fullRowCount, checks) {
         warnings.push(`Filter '${check.paramName}' requested ${JSON.stringify(check.requestedValues)} but no returned row matches — the server may not honor this filter. Observed values: ${sample}${overflow}.`);
     }
 }
+/**
+ * Build a `FilterMatchCheck` for an FK identifier filter — the user's input
+ * values are compared against a fresh distribution computed over `fieldName`
+ * on the returned rows. Surfaces silently-ignored FK filters as warnings
+ * without polluting the public `result.distributions` shape with raw DbId
+ * frequencies (which carry no semantic meaning to the agent).
+ */
+export function fkMatchCheck(paramName, requestedValues, rows, fieldName) {
+    return {
+        paramName,
+        requestedValues,
+        distribution: computeDistribution(rows, (r) => asString(r[fieldName])),
+    };
+}
 /**
  * Compose a refinement hint for a too-large result set. Picks the highest-
  * cardinality non-empty distribution to suggest as a narrower. Returns

package/dist/mcp-server/tools/shared/find-helpers.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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