@cornerstonejs/tools 1.78.1 → 2.0.0-beta.10

package/dist/cjs/utilities/segmentation/getSegmentAtWorldPoint.js.map

@@ -1 +0,0 @@
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package/dist/cjs/utilities/segmentation/getUniqueSegmentIndices.d.ts

@@ -1,4 +0,0 @@
-export declare const setSegmentationDirty: (segmentationId: string) => void;
-export declare const setSegmentationClean: (segmentationId: string) => void;
-declare function getUniqueSegmentIndices(segmentationId: any): any;
-export { getUniqueSegmentIndices };

package/dist/cjs/utilities/segmentation/getUniqueSegmentIndices.js

@@ -1,109 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.getUniqueSegmentIndices = exports.setSegmentationClean = exports.setSegmentationDirty = void 0;
-const core_1 = require("@cornerstonejs/core");
-const segmentationState_1 = require("../../stateManagement/segmentation/segmentationState");
-const stackVolumeCheck_1 = require("../../tools/segmentation/strategies/utils/stackVolumeCheck");
-const enums_1 = require("../../enums");
-const segmentIndicesCache = new Map();
-const setSegmentationDirty = (segmentationId) => {
-    const cached = segmentIndicesCache.get(segmentationId);
-    if (cached) {
-        cached.isDirty = true;
-    }
-};
-exports.setSegmentationDirty = setSegmentationDirty;
-const setSegmentationClean = (segmentationId) => {
-    const cached = segmentIndicesCache.get(segmentationId);
-    if (cached) {
-        cached.isDirty = false;
-    }
-};
-exports.setSegmentationClean = setSegmentationClean;
-function getCachedSegmentIndices(segmentationId) {
-    const cached = segmentIndicesCache.get(segmentationId);
-    if (cached && !cached.isDirty) {
-        return cached.indices;
-    }
-    return null;
-}
-function getUniqueSegmentIndices(segmentationId) {
-    const cachedResult = getCachedSegmentIndices(segmentationId);
-    if (cachedResult) {
-        return cachedResult;
-    }
-    const segmentation = (0, segmentationState_1.getSegmentation)(segmentationId);
-    if (!segmentation) {
-        throw new Error(`No segmentation found for segmentationId ${segmentationId}`);
-    }
-    let indices;
-    switch (segmentation.type) {
-        case enums_1.SegmentationRepresentations.Labelmap:
-            indices = handleLabelmapSegmentation(segmentation, segmentationId);
-            break;
-        case enums_1.SegmentationRepresentations.Contour:
-            indices = handleContourSegmentation(segmentation);
-            break;
-        case enums_1.SegmentationRepresentations.Surface:
-            indices = handleSurfaceSegmentation(segmentation);
-            break;
-        default:
-            throw new Error(`Unsupported segmentation type: ${segmentation.type}`);
-    }
-    segmentIndicesCache.set(segmentationId, { indices, isDirty: false });
-    return indices;
-}
-exports.getUniqueSegmentIndices = getUniqueSegmentIndices;
-function handleLabelmapSegmentation(segmentation, segmentationId) {
-    const labelmapData = segmentation.representationData[enums_1.SegmentationRepresentations.Labelmap];
-    const keySet = new Set();
-    if ((0, stackVolumeCheck_1.isVolumeSegmentation)(labelmapData)) {
-        addVolumeSegmentIndices(keySet, segmentationId);
-    }
-    else {
-        addImageSegmentIndices(keySet, labelmapData.imageIdReferenceMap);
-    }
-    return Array.from(keySet)
-        .map(Number)
-        .sort((a, b) => a - b);
-}
-function addVolumeSegmentIndices(keySet, segmentationId) {
-    const volume = core_1.cache.getVolume(segmentationId);
-    const scalarData = volume.getScalarData();
-    scalarData.forEach((segmentIndex) => {
-        if (segmentIndex !== 0) {
-            keySet.add(segmentIndex);
-        }
-    });
-}
-function addImageSegmentIndices(keySet, imageIdReferenceMap) {
-    imageIdReferenceMap.forEach((segmentationImageId) => {
-        const image = core_1.cache.getImage(segmentationImageId);
-        const scalarData = image.getPixelData();
-        scalarData.forEach((segmentIndex) => {
-            if (segmentIndex !== 0) {
-                keySet.add(segmentIndex);
-            }
-        });
-    });
-}
-function handleContourSegmentation(segmentation) {
-    const { annotationUIDsMap, geometryIds } = segmentation.representationData.CONTOUR || {};
-    if (!geometryIds) {
-        throw new Error(`No geometryIds found for segmentationId ${segmentation.segmentationId}`);
-    }
-    const indices = new Set([...annotationUIDsMap.keys()]);
-    geometryIds.forEach((geometryId) => {
-        const geometry = core_1.cache.getGeometry(geometryId);
-        indices.add(geometry.data.getSegmentIndex());
-    });
-    return Array.from(indices).sort((a, b) => a - b);
-}
-function handleSurfaceSegmentation(segmentation) {
-    var _a, _b;
-    const geometryIds = (_b = (_a = segmentation.representationData.SURFACE) === null || _a === void 0 ? void 0 : _a.geometryIds) !== null && _b !== void 0 ? _b : [];
-    return Array.from(geometryIds.keys())
-        .map(Number)
-        .sort((a, b) => a - b);
-}
-//# sourceMappingURL=getUniqueSegmentIndices.js.map

package/dist/cjs/utilities/segmentation/getUniqueSegmentIndices.js.map

@@ -1 +0,0 @@
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package/dist/cjs/utilities/segmentation/index.d.ts

@@ -1,22 +0,0 @@
-import thresholdVolumeByRange from './thresholdVolumeByRange';
-import rectangleROIThresholdVolumeByRange from './rectangleROIThresholdVolumeByRange';
-import createMergedLabelmapForIndex from './createMergedLabelmapForIndex';
-import isValidRepresentationConfig from './isValidRepresentationConfig';
-import getDefaultRepresentationConfig from './getDefaultRepresentationConfig';
-import createLabelmapVolumeForViewport from './createLabelmapVolumeForViewport';
-import { triggerSegmentationRender } from './triggerSegmentationRender';
-import floodFill from './floodFill';
-import { getBrushSizeForToolGroup, setBrushSizeForToolGroup } from './brushSizeForToolGroup';
-import { getBrushThresholdForToolGroup, setBrushThresholdForToolGroup } from './brushThresholdForToolGroup';
-import thresholdSegmentationByRange from './thresholdSegmentationByRange';
-import { createImageIdReferenceMap } from './createImageIdReferenceMap';
-import contourAndFindLargestBidirectional from './contourAndFindLargestBidirectional';
-import createBidirectionalToolData from './createBidirectionalToolData';
-import segmentContourAction from './segmentContourAction';
-import { invalidateBrushCursor } from './invalidateBrushCursor';
-import { getUniqueSegmentIndices } from './getUniqueSegmentIndices';
-import { getSegmentAtWorldPoint } from './getSegmentAtWorldPoint';
-import { getSegmentAtLabelmapBorder } from './getSegmentAtLabelmapBorder';
-import { getHoveredContourSegmentationAnnotation } from './getHoveredContourSegmentationAnnotation';
-import { getBrushToolInstances } from './utilities';
-export { thresholdVolumeByRange, createMergedLabelmapForIndex, isValidRepresentationConfig, getDefaultRepresentationConfig, createLabelmapVolumeForViewport, rectangleROIThresholdVolumeByRange, triggerSegmentationRender, floodFill, getBrushSizeForToolGroup, setBrushSizeForToolGroup, getBrushThresholdForToolGroup, setBrushThresholdForToolGroup, thresholdSegmentationByRange, createImageIdReferenceMap, contourAndFindLargestBidirectional, createBidirectionalToolData, segmentContourAction, invalidateBrushCursor, getUniqueSegmentIndices, getSegmentAtWorldPoint, getSegmentAtLabelmapBorder, getHoveredContourSegmentationAnnotation, getBrushToolInstances, };

package/dist/cjs/utilities/segmentation/index.js

@@ -1,51 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.getBrushToolInstances = exports.getHoveredContourSegmentationAnnotation = exports.getSegmentAtLabelmapBorder = exports.getSegmentAtWorldPoint = exports.getUniqueSegmentIndices = exports.invalidateBrushCursor = exports.segmentContourAction = exports.createBidirectionalToolData = exports.contourAndFindLargestBidirectional = exports.createImageIdReferenceMap = exports.thresholdSegmentationByRange = exports.setBrushThresholdForToolGroup = exports.getBrushThresholdForToolGroup = exports.setBrushSizeForToolGroup = exports.getBrushSizeForToolGroup = exports.floodFill = exports.triggerSegmentationRender = exports.rectangleROIThresholdVolumeByRange = exports.createLabelmapVolumeForViewport = exports.getDefaultRepresentationConfig = exports.isValidRepresentationConfig = exports.createMergedLabelmapForIndex = exports.thresholdVolumeByRange = void 0;
-const thresholdVolumeByRange_1 = __importDefault(require("./thresholdVolumeByRange"));
-exports.thresholdVolumeByRange = thresholdVolumeByRange_1.default;
-const rectangleROIThresholdVolumeByRange_1 = __importDefault(require("./rectangleROIThresholdVolumeByRange"));
-exports.rectangleROIThresholdVolumeByRange = rectangleROIThresholdVolumeByRange_1.default;
-const createMergedLabelmapForIndex_1 = __importDefault(require("./createMergedLabelmapForIndex"));
-exports.createMergedLabelmapForIndex = createMergedLabelmapForIndex_1.default;
-const isValidRepresentationConfig_1 = __importDefault(require("./isValidRepresentationConfig"));
-exports.isValidRepresentationConfig = isValidRepresentationConfig_1.default;
-const getDefaultRepresentationConfig_1 = __importDefault(require("./getDefaultRepresentationConfig"));
-exports.getDefaultRepresentationConfig = getDefaultRepresentationConfig_1.default;
-const createLabelmapVolumeForViewport_1 = __importDefault(require("./createLabelmapVolumeForViewport"));
-exports.createLabelmapVolumeForViewport = createLabelmapVolumeForViewport_1.default;
-const triggerSegmentationRender_1 = require("./triggerSegmentationRender");
-Object.defineProperty(exports, "triggerSegmentationRender", { enumerable: true, get: function () { return triggerSegmentationRender_1.triggerSegmentationRender; } });
-const floodFill_1 = __importDefault(require("./floodFill"));
-exports.floodFill = floodFill_1.default;
-const brushSizeForToolGroup_1 = require("./brushSizeForToolGroup");
-Object.defineProperty(exports, "getBrushSizeForToolGroup", { enumerable: true, get: function () { return brushSizeForToolGroup_1.getBrushSizeForToolGroup; } });
-Object.defineProperty(exports, "setBrushSizeForToolGroup", { enumerable: true, get: function () { return brushSizeForToolGroup_1.setBrushSizeForToolGroup; } });
-const brushThresholdForToolGroup_1 = require("./brushThresholdForToolGroup");
-Object.defineProperty(exports, "getBrushThresholdForToolGroup", { enumerable: true, get: function () { return brushThresholdForToolGroup_1.getBrushThresholdForToolGroup; } });
-Object.defineProperty(exports, "setBrushThresholdForToolGroup", { enumerable: true, get: function () { return brushThresholdForToolGroup_1.setBrushThresholdForToolGroup; } });
-const thresholdSegmentationByRange_1 = __importDefault(require("./thresholdSegmentationByRange"));
-exports.thresholdSegmentationByRange = thresholdSegmentationByRange_1.default;
-const createImageIdReferenceMap_1 = require("./createImageIdReferenceMap");
-Object.defineProperty(exports, "createImageIdReferenceMap", { enumerable: true, get: function () { return createImageIdReferenceMap_1.createImageIdReferenceMap; } });
-const contourAndFindLargestBidirectional_1 = __importDefault(require("./contourAndFindLargestBidirectional"));
-exports.contourAndFindLargestBidirectional = contourAndFindLargestBidirectional_1.default;
-const createBidirectionalToolData_1 = __importDefault(require("./createBidirectionalToolData"));
-exports.createBidirectionalToolData = createBidirectionalToolData_1.default;
-const segmentContourAction_1 = __importDefault(require("./segmentContourAction"));
-exports.segmentContourAction = segmentContourAction_1.default;
-const invalidateBrushCursor_1 = require("./invalidateBrushCursor");
-Object.defineProperty(exports, "invalidateBrushCursor", { enumerable: true, get: function () { return invalidateBrushCursor_1.invalidateBrushCursor; } });
-const getUniqueSegmentIndices_1 = require("./getUniqueSegmentIndices");
-Object.defineProperty(exports, "getUniqueSegmentIndices", { enumerable: true, get: function () { return getUniqueSegmentIndices_1.getUniqueSegmentIndices; } });
-const getSegmentAtWorldPoint_1 = require("./getSegmentAtWorldPoint");
-Object.defineProperty(exports, "getSegmentAtWorldPoint", { enumerable: true, get: function () { return getSegmentAtWorldPoint_1.getSegmentAtWorldPoint; } });
-const getSegmentAtLabelmapBorder_1 = require("./getSegmentAtLabelmapBorder");
-Object.defineProperty(exports, "getSegmentAtLabelmapBorder", { enumerable: true, get: function () { return getSegmentAtLabelmapBorder_1.getSegmentAtLabelmapBorder; } });
-const getHoveredContourSegmentationAnnotation_1 = require("./getHoveredContourSegmentationAnnotation");
-Object.defineProperty(exports, "getHoveredContourSegmentationAnnotation", { enumerable: true, get: function () { return getHoveredContourSegmentationAnnotation_1.getHoveredContourSegmentationAnnotation; } });
-const utilities_1 = require("./utilities");
-Object.defineProperty(exports, "getBrushToolInstances", { enumerable: true, get: function () { return utilities_1.getBrushToolInstances; } });
-//# sourceMappingURL=index.js.map

package/dist/cjs/utilities/segmentation/index.js.map

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package/dist/cjs/utilities/segmentation/invalidateBrushCursor.d.ts

@@ -1 +0,0 @@
-export declare function invalidateBrushCursor(toolGroupId: string): void;

package/dist/cjs/utilities/segmentation/invalidateBrushCursor.js

@@ -1,31 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.invalidateBrushCursor = void 0;
-const ToolGroupManager_1 = require("../../store/ToolGroupManager");
-const triggerAnnotationRenderForViewportIds_1 = __importDefault(require("../triggerAnnotationRenderForViewportIds"));
-const core_1 = require("@cornerstonejs/core");
-const utilities_1 = require("./utilities");
-function invalidateBrushCursor(toolGroupId) {
-    const toolGroup = (0, ToolGroupManager_1.getToolGroup)(toolGroupId);
-    if (toolGroup === undefined) {
-        return;
-    }
-    const brushBasedToolInstances = (0, utilities_1.getBrushToolInstances)(toolGroupId);
-    brushBasedToolInstances.forEach((tool) => {
-        tool.invalidateBrushCursor();
-    });
-    const viewportsInfo = toolGroup.getViewportsInfo();
-    const viewportsInfoArray = Object.keys(viewportsInfo).map((key) => viewportsInfo[key]);
-    if (!viewportsInfoArray.length) {
-        return;
-    }
-    const { renderingEngineId } = viewportsInfoArray[0];
-    const viewportIds = toolGroup.getViewportIds();
-    const renderingEngine = (0, core_1.getRenderingEngine)(renderingEngineId);
-    (0, triggerAnnotationRenderForViewportIds_1.default)(renderingEngine, viewportIds);
-}
-exports.invalidateBrushCursor = invalidateBrushCursor;
-//# sourceMappingURL=invalidateBrushCursor.js.map

package/dist/cjs/utilities/segmentation/invalidateBrushCursor.js.map

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package/dist/cjs/utilities/segmentation/isLineInSegment.d.ts

@@ -1,9 +0,0 @@
-import type { Types } from '@cornerstonejs/core';
-import { vec3 } from 'gl-matrix';
-export default function isLineInSegment(point1: Types.Point3, point2: Types.Point3, isInSegment: any): boolean;
-declare function createIsInSegment(segVolumeId: string, segmentIndex: number, containedSegmentIndices?: Set<number>): {
-    testCenter: (point1: any, point2: any) => boolean;
-    toIJK: (point: any) => vec3;
-    testIJK: (ijk: any) => boolean;
-};
-export { createIsInSegment, isLineInSegment };

package/dist/cjs/utilities/segmentation/isLineInSegment.js

@@ -1,55 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.isLineInSegment = exports.createIsInSegment = void 0;
-const core_1 = require("@cornerstonejs/core");
-const gl_matrix_1 = require("gl-matrix");
-function isLineInSegment(point1, point2, isInSegment) {
-    const ijk1 = isInSegment.toIJK(point1);
-    const ijk2 = isInSegment.toIJK(point2);
-    const testPoint = gl_matrix_1.vec3.create();
-    const { testIJK } = isInSegment;
-    const delta = gl_matrix_1.vec3.sub(gl_matrix_1.vec3.create(), ijk1, ijk2);
-    const testSize = Math.round(Math.max(...delta.map(Math.abs)));
-    if (testSize < 2) {
-        return true;
-    }
-    const unitDelta = gl_matrix_1.vec3.scale(gl_matrix_1.vec3.create(), delta, 1 / testSize);
-    for (let i = 1; i < testSize; i++) {
-        gl_matrix_1.vec3.scaleAndAdd(testPoint, ijk2, unitDelta, i);
-        if (!testIJK(testPoint)) {
-            return false;
-        }
-    }
-    return true;
-}
-exports.default = isLineInSegment;
-exports.isLineInSegment = isLineInSegment;
-function createIsInSegment(segVolumeId, segmentIndex, containedSegmentIndices) {
-    const vol = core_1.cache.getVolume(segVolumeId);
-    if (!vol) {
-        console.warn(`No volume found for ${segVolumeId}`);
-        return;
-    }
-    const segData = vol.imageData.getPointData().getScalars().getData();
-    const width = vol.dimensions[0];
-    const pixelsPerSlice = width * vol.dimensions[1];
-    return {
-        testCenter: (point1, point2) => {
-            const point = gl_matrix_1.vec3.add(gl_matrix_1.vec3.create(), point1, point2).map((it) => it / 2);
-            const ijk = vol.imageData.worldToIndex(point).map(Math.round);
-            const [i, j, k] = ijk;
-            const index = i + j * width + k * pixelsPerSlice;
-            const value = segData[index];
-            return value === segmentIndex || (containedSegmentIndices === null || containedSegmentIndices === void 0 ? void 0 : containedSegmentIndices.has(value));
-        },
-        toIJK: (point) => vol.imageData.worldToIndex(point),
-        testIJK: (ijk) => {
-            const [i, j, k] = ijk;
-            const index = Math.round(i) + Math.round(j) * width + Math.round(k) * pixelsPerSlice;
-            const value = segData[index];
-            return value === segmentIndex || (containedSegmentIndices === null || containedSegmentIndices === void 0 ? void 0 : containedSegmentIndices.has(value));
-        },
-    };
-}
-exports.createIsInSegment = createIsInSegment;
-//# sourceMappingURL=isLineInSegment.js.map

package/dist/cjs/utilities/segmentation/isLineInSegment.js.map

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package/dist/cjs/utilities/segmentation/isValidRepresentationConfig.d.ts

@@ -1,2 +0,0 @@
-import { RepresentationConfig } from '../../types/SegmentationStateTypes';
-export default function isValidRepresentationConfig(representationType: string, config: RepresentationConfig): boolean;

package/dist/cjs/utilities/segmentation/isValidRepresentationConfig.js

@@ -1,17 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-const labelmapConfig_1 = require("../../tools/displayTools/Labelmap/labelmapConfig");
-const SegmentationRepresentations_1 = __importDefault(require("../../enums/SegmentationRepresentations"));
-function isValidRepresentationConfig(representationType, config) {
-    switch (representationType) {
-        case SegmentationRepresentations_1.default.Labelmap:
-            return (0, labelmapConfig_1.isValidLabelmapConfig)(config);
-        default:
-            throw new Error(`Unknown representation type: ${representationType}`);
-    }
-}
-exports.default = isValidRepresentationConfig;
-//# sourceMappingURL=isValidRepresentationConfig.js.map

package/dist/cjs/utilities/segmentation/isValidRepresentationConfig.js.map

@@ -1 +0,0 @@
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package/dist/cjs/utilities/segmentation/rectangleROIThresholdVolumeByRange.d.ts

@@ -1,20 +0,0 @@
-import type { Types } from '@cornerstonejs/core';
-import { ThresholdInformation } from './utilities';
-export declare type ThresholdOptions = {
-    numSlicesToProject?: number;
-    overwrite: boolean;
-    overlapType?: number;
-    segmentIndex?: number;
-};
-export declare type AnnotationForThresholding = {
-    data: {
-        handles: {
-            points: Types.Point3[];
-        };
-        cachedStats?: {
-            projectionPoints?: Types.Point3[][];
-        };
-    };
-};
-declare function rectangleROIThresholdVolumeByRange(annotationUIDs: string[], segmentationVolume: Types.IImageVolume, thresholdVolumeInformation: ThresholdInformation[], options: ThresholdOptions): Types.IImageVolume;
-export default rectangleROIThresholdVolumeByRange;

package/dist/cjs/utilities/segmentation/rectangleROIThresholdVolumeByRange.js

@@ -1,39 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-const annotation_1 = require("../../stateManagement/annotation");
-const tools_1 = require("../../tools");
-const thresholdVolumeByRange_1 = __importDefault(require("./thresholdVolumeByRange"));
-const getBoundsIJKFromRectangleAnnotations_1 = __importDefault(require("../rectangleROITool/getBoundsIJKFromRectangleAnnotations"));
-function rectangleROIThresholdVolumeByRange(annotationUIDs, segmentationVolume, thresholdVolumeInformation, options) {
-    const annotations = annotationUIDs.map((annotationUID) => {
-        return annotation_1.state.getAnnotation(annotationUID);
-    });
-    _validateAnnotations(annotations);
-    let boundsIJK;
-    for (let i = 0; i < thresholdVolumeInformation.length; i++) {
-        const volumeSize = thresholdVolumeInformation[i].volume.getScalarData().length;
-        if (volumeSize === segmentationVolume.getScalarData().length || i === 0) {
-            boundsIJK = (0, getBoundsIJKFromRectangleAnnotations_1.default)(annotations, thresholdVolumeInformation[i].volume, options);
-        }
-    }
-    const outputSegmentationVolume = (0, thresholdVolumeByRange_1.default)(segmentationVolume, thresholdVolumeInformation, Object.assign(Object.assign({}, options), { boundsIJK }));
-    outputSegmentationVolume.modified();
-    return outputSegmentationVolume;
-}
-function _validateAnnotations(annotations) {
-    const validToolNames = [
-        tools_1.RectangleROIThresholdTool.toolName,
-        tools_1.RectangleROIStartEndThresholdTool.toolName,
-    ];
-    for (const annotation of annotations) {
-        const name = annotation.metadata.toolName;
-        if (!validToolNames.includes(name)) {
-            throw new Error('rectangleROIThresholdVolumeByRange only supports RectangleROIThreshold and RectangleROIStartEndThreshold annotations');
-        }
-    }
-}
-exports.default = rectangleROIThresholdVolumeByRange;
-//# sourceMappingURL=rectangleROIThresholdVolumeByRange.js.map

package/dist/cjs/utilities/segmentation/rectangleROIThresholdVolumeByRange.js.map

@@ -1 +0,0 @@
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package/dist/cjs/utilities/segmentation/segmentContourAction.d.ts

@@ -1,17 +0,0 @@
-import { type Types } from '@cornerstonejs/core';
-export declare type Segment = {
-    segmentationId: string;
-    segmentIndex: number;
-    label: string;
-    style?: any;
-    containedSegmentIndices?: (number: any) => boolean;
-};
-export declare type SegmentContourActionConfiguration = {
-    getSegment?: (enabledElement: Types.IEnabledElement, configuration: SegmentContourActionConfiguration) => Segment;
-    segmentationId?: string;
-    segmentIndex?: number;
-    segmentData?: Map<number, Segment>;
-    toolGroupId?: string;
-};
-export default function segmentContourAction(element: HTMLDivElement, configuration: any): any;
-export declare function defaultGetSegment(enabledElement: Types.IEnabledElement, configuration: SegmentContourActionConfiguration): Segment;

package/dist/cjs/utilities/segmentation/segmentContourAction.js

@@ -1,121 +0,0 @@
-"use strict";
-var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    var desc = Object.getOwnPropertyDescriptor(m, k);
-    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
-      desc = { enumerable: true, get: function() { return m[k]; } };
-    }
-    Object.defineProperty(o, k2, desc);
-}) : (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    o[k2] = m[k];
-}));
-var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
-    Object.defineProperty(o, "default", { enumerable: true, value: v });
-}) : function(o, v) {
-    o["default"] = v;
-});
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.defaultGetSegment = void 0;
-const core_1 = require("@cornerstonejs/core");
-const segmentation = __importStar(require("../../stateManagement/segmentation"));
-const annotation_1 = require("../../stateManagement/annotation");
-const viewport_1 = require("../viewport");
-const contourAndFindLargestBidirectional_1 = __importDefault(require("./contourAndFindLargestBidirectional"));
-const createBidirectionalToolData_1 = __importDefault(require("./createBidirectionalToolData"));
-const BidirectionalTool_1 = __importDefault(require("../../tools/annotation/BidirectionalTool"));
-function segmentContourAction(element, configuration) {
-    const { data: configurationData } = configuration;
-    const enabledElement = (0, core_1.getEnabledElement)(element);
-    const segment = (configurationData.getSegment || defaultGetSegment)(enabledElement, configurationData);
-    if (!segment) {
-        return;
-    }
-    const FrameOfReferenceUID = enabledElement.viewport.getFrameOfReferenceUID();
-    const segmentationsList = segmentation.state.getSegmentations();
-    const { segmentIndex, segmentationId } = segment;
-    const bidirectionals = annotation_1.state.getAnnotations(this.toolName || BidirectionalTool_1.default.toolName, FrameOfReferenceUID);
-    let hasExistingActiveSegment = false;
-    const existingLargestBidirectionals = bidirectionals.filter((existingBidirectionalItem) => {
-        const { segment } = existingBidirectionalItem.data;
-        if (!segment) {
-            return;
-        }
-        if (segment.segmentationId === segmentationId &&
-            segment.segmentIndex === segmentIndex) {
-            hasExistingActiveSegment = true;
-            existingBidirectionalItem.data.segment = segment;
-        }
-        return !!segment;
-    });
-    if (!hasExistingActiveSegment) {
-        existingLargestBidirectionals.push({
-            data: { segment },
-        });
-    }
-    let newBidirectional;
-    existingLargestBidirectionals.forEach((existingLargestBidirectional) => {
-        const segments = [];
-        const { segment: updateSegment } = existingLargestBidirectional.data;
-        const { segmentIndex, segmentationId } = updateSegment;
-        segments[segmentIndex] = updateSegment;
-        annotation_1.state.removeAnnotation(existingLargestBidirectional.annotationUID);
-        const bidirectionalData = (0, contourAndFindLargestBidirectional_1.default)(Object.assign(Object.assign({}, segmentationsList.find((segmentation) => segmentation.segmentationId === segmentationId)), { segments }));
-        if (!bidirectionalData) {
-            return;
-        }
-        const bidirectionalToolData = (0, createBidirectionalToolData_1.default)(bidirectionalData, enabledElement.viewport);
-        bidirectionalToolData.annotationUID =
-            existingLargestBidirectional.annotationUID;
-        bidirectionalToolData.data.segment = updateSegment;
-        const annotationUID = annotation_1.state.addAnnotation(bidirectionalToolData, FrameOfReferenceUID);
-        if (updateSegment.segmentIndex === segment.segmentIndex &&
-            updateSegment.segmentationId === segment.segmentationId) {
-            newBidirectional = bidirectionalData;
-            const { style } = segment;
-            if (style) {
-                annotation_1.config.style.setAnnotationStyles(annotationUID, style);
-            }
-        }
-    });
-    if (newBidirectional) {
-        const { sliceIndex } = newBidirectional;
-        const imageIds = enabledElement.viewport.getImageIds();
-        (0, viewport_1.jumpToSlice)(element, {
-            imageIndex: imageIds.length - 1 - sliceIndex,
-        });
-        enabledElement.viewport.render();
-    }
-    else {
-        console.warn('No bidirectional found');
-    }
-    return newBidirectional;
-}
-exports.default = segmentContourAction;
-function defaultGetSegment(enabledElement, configuration) {
-    var _a, _b;
-    const segmentationsList = segmentation.state.getSegmentations();
-    if (!segmentationsList.length) {
-        return;
-    }
-    const segmentationId = configuration.segmentationId || segmentationsList[0].segmentationId;
-    const segmentIndex = (_a = configuration.segmentIndex) !== null && _a !== void 0 ? _a : segmentation.segmentIndex.getActiveSegmentIndex(segmentationId);
-    if (!segmentIndex) {
-        return;
-    }
-    const segmentData = (_b = configuration.segmentData) === null || _b === void 0 ? void 0 : _b.get(segmentIndex);
-    return Object.assign({ label: `Segment ${segmentIndex}`, segmentIndex,
-        segmentationId }, segmentData);
-}
-exports.defaultGetSegment = defaultGetSegment;
-//# sourceMappingURL=segmentContourAction.js.map

package/dist/cjs/utilities/segmentation/segmentContourAction.js.map

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package/dist/cjs/utilities/segmentation/thresholdSegmentationByRange.d.ts

@@ -1,4 +0,0 @@
-import { Types } from '@cornerstonejs/core';
-import { ThresholdInformation } from './utilities';
-declare function thresholdSegmentationByRange(segmentationVolume: Types.IImageVolume, segmentationIndex: number, thresholdVolumeInformation: ThresholdInformation[], overlapType: number): Types.IImageVolume;
-export default thresholdSegmentationByRange;