@cornerstonejs/tools 1.57.2 → 1.58.1

package/dist/cjs/workers/polySegConverters.js

@@ -17,9 +17,14 @@ const ImageData_1 = __importDefault(require("@kitware/vtk.js/Common/DataModel/Im
 const DataArray_1 = __importDefault(require("@kitware/vtk.js/Common/Core/DataArray"));
 const polyseg_wasm_1 = __importDefault(require("@icr/polyseg-wasm"));
 const core_1 = require("@cornerstonejs/core");
+const Plane_1 = __importDefault(require("@kitware/vtk.js/Common/DataModel/Plane"));
+const PolyData_1 = __importDefault(require("@kitware/vtk.js/Common/DataModel/PolyData"));
+const ContourLoopExtraction_1 = __importDefault(require("@kitware/vtk.js/Filters/General/ContourLoopExtraction"));
+const Cutter_1 = __importDefault(require("@kitware/vtk.js/Filters/Core/Cutter"));
 const boundingBox_1 = require("../utilities/boundingBox");
 const utilities_1 = require("../utilities");
 const polyline_1 = require("../utilities/math/polyline");
+const planar_1 = require("../utilities/planar");
 const polySegConverters = {
     polySeg: null,
     polySegInitializing: false,
@@ -262,6 +267,74 @@ const polySegConverters = {
             return segmentationVoxelManager.scalarData;
         });
     },
+    getSurfacesAABBs({ surfacesInfo }) {
+        const aabbs = new Map();
+        for (const { points, id } of surfacesInfo) {
+            const aabb = (0, polyline_1.getAABB)(points, { numDimensions: 3 });
+            aabbs.set(id, aabb);
+        }
+        return aabbs;
+    },
+    cutSurfacesIntoPlanes({ planesInfo, surfacesInfo, surfacesAABB = new Map() }, progressCallback, updateCacheCallback) {
+        const numberOfPlanes = planesInfo.length;
+        const cutter = Cutter_1.default.newInstance();
+        const plane1 = Plane_1.default.newInstance();
+        cutter.setCutFunction(plane1);
+        const surfacePolyData = PolyData_1.default.newInstance();
+        try {
+            for (const [index, planeInfo] of planesInfo.entries()) {
+                const { sliceIndex, planes } = planeInfo;
+                const polyDataResults = new Map();
+                for (const polyDataInfo of surfacesInfo) {
+                    const { points, polys, id } = polyDataInfo;
+                    const aabb3 = surfacesAABB.get(id) || (0, polyline_1.getAABB)(points, { numDimensions: 3 });
+                    if (!surfacesAABB.has(id)) {
+                        surfacesAABB.set(id, aabb3);
+                    }
+                    const { minX, minY, minZ, maxX, maxY, maxZ } = aabb3;
+                    const { origin, normal } = planes[0];
+                    if (!(0, planar_1.isPlaneIntersectingAABB)(origin, normal, minX, minY, minZ, maxX, maxY, maxZ)) {
+                        continue;
+                    }
+                    surfacePolyData.getPoints().setData(points, 3);
+                    surfacePolyData.getPolys().setData(polys, 3);
+                    surfacePolyData.modified();
+                    cutter.setInputData(surfacePolyData);
+                    plane1.setOrigin(origin);
+                    plane1.setNormal(normal);
+                    try {
+                        cutter.update();
+                    }
+                    catch (e) {
+                        console.warn('Error during clipping', e);
+                        continue;
+                    }
+                    const polyData = cutter.getOutputData();
+                    const cutterOutput = polyData;
+                    cutterOutput.buildLinks();
+                    const loopExtraction = ContourLoopExtraction_1.default.newInstance();
+                    loopExtraction.setInputData(cutterOutput);
+                    const loopOutput = loopExtraction.getOutputData();
+                    if (polyData) {
+                        polyDataResults.set(id, {
+                            points: loopOutput.getPoints().getData(),
+                            lines: loopOutput.getLines().getData(),
+                            numberOfCells: loopOutput.getLines().getNumberOfCells(),
+                        });
+                    }
+                }
+                progressCallback({ progress: (index + 1) / numberOfPlanes });
+                updateCacheCallback({ sliceIndex, polyDataResults });
+            }
+        }
+        catch (e) {
+            console.warn('Error during processing', e);
+        }
+        finally {
+            surfacesInfo = null;
+            plane1.delete();
+        }
+    },
 };
 (0, comlink_1.expose)(polySegConverters);
 //# sourceMappingURL=polySegConverters.js.map

package/dist/cjs/workers/polySegConverters.js.map

@@ -1 +1 @@
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package/dist/esm/drawingSvg/drawPath.js

@@ -19,7 +19,7 @@ export default function drawPath(svgDrawingHelper, annotationUID, pathUID, point
         for (let j = 0; j < numPoints; j++) {
             const point = points[j];
             const cmd = j ? 'L' : 'M';
-            pointsAttribute += `${cmd} ${point[0]},${point[1]} `;
+            pointsAttribute += `${cmd} ${point[0].toFixed(1)}, ${point[1].toFixed(1)} `;
         }
         if (closePath) {
             pointsAttribute += 'Z ';

package/dist/esm/drawingSvg/drawPath.js.map

@@ -1 +1 @@
-{"version":3,"file":"drawPath.js","sourceRoot":"","sources":["../../../src/drawingSvg/drawPath.ts"],"names":[],"mappings":"AACA,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,uBAAuB,MAAM,2BAA2B,CAAC;AAChE,OAAO,wBAAwB,MAAM,4BAA4B,CAAC;AASlE,MAAM,CAAC,OAAO,UAAU,QAAQ,CAC9B,gBAAkC,EAClC,aAAqB,EACrB,OAAe,EACf,MAAyC,EACzC,OAQC;IAID,MAAM,YAAY,GAChB,MAAM,CAAC,MAAM,IAAI,MAAM,CAAC,CAAC,CAAC,CAAC,MAAM,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;IAEnE,MAAM,YAAY,GAAG,YAAY,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;IACtD,MAAM,EACJ,KAAK,GAAG,YAAY,EACpB,KAAK,GAAG,EAAE,EACV,SAAS,GAAG,MAAM,EAClB,WAAW,GAAG,CAAC,EACf,SAAS,EACT,QAAQ,EACR,SAAS,GAAG,KAAK,GAClB,GAAG,OAAO,CAAC;IAGZ,MAAM,WAAW,GAAG,SAAS,IAAI,KAAK,CAAC;IAEvC,MAAM,KAAK,GAAG,4BAA4B,CAAC;IAC3C,MAAM,WAAW,GAAG,QAAQ,CAAC,aAAa,EAAE,MAAM,EAAE,OAAO,CAAC,CAAC;IAC7D,MAAM,YAAY,GAAG,gBAAgB,CAAC,UAAU,CAAC,WAAW,CAAC,CAAC;IAC9D,IAAI,eAAe,GAAG,EAAE,CAAC;IAEzB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,SAAS,GAAG,YAAY,CAAC,MAAM,EAAE,CAAC,GAAG,SAAS,EAAE,CAAC,EAAE,EAAE;QACnE,MAAM,MAAM,GAAG,YAAY,CAAC,CAAC,CAAC,CAAC;QAC/B,MAAM,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC;QAEhC,IAAI,SAAS,GAAG,CAAC,EAAE;YACjB,SAAS;SACV;QAED,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,EAAE,CAAC,EAAE,EAAE;YAClC,MAAM,KAAK,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC;YACxB,MAAM,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,GAAG,CAAC;YAE1B,eAAe,IAAI,GAAG,GAAG,IAAI,KAAK,CAAC,CAAC,CAAC,IAAI,KAAK,CAAC,CAAC,CAAC,GAAG,CAAC;SACtD;QAED,IAAI,SAAS,EAAE;YACb,eAAe,IAAI,IAAI,CAAC;SACzB;KACF;IAED,IAAI,CAAC,eAAe,EAAE;QACpB,OAAO;KACR;IAED,MAAM,UAAU,GAAG;QACjB,CAAC,EAAE,eAAe;QAClB,MAAM,EAAE,KAAK;QACb,IAAI,EAAE,SAAS;QACf,cAAc,EAAE,WAAW;QAC3B,cAAc,EAAE,WAAW;QAC3B,kBAAkB,EAAE,QAAQ;KAC7B,CAAC;IAEF,IAAI,YAAY,EAAE;QAEhB,wBAAwB,CAAC,UAAU,EAAE,YAAY,CAAC,CAAC;QAEnD,gBAAgB,CAAC,cAAc,CAAC,WAAW,CAAC,CAAC;KAC9C;SAAM;QACL,MAAM,OAAO,GAAG,QAAQ,CAAC,eAAe,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC;QAExD,uBAAuB,CAAC,UAAU,EAAE,OAAO,CAAC,CAAC;QAC7C,gBAAgB,CAAC,UAAU,CAAC,OAAO,EAAE,WAAW,CAAC,CAAC;KACnD;AACH,CAAC"}
+{"version":3,"file":"drawPath.js","sourceRoot":"","sources":["../../../src/drawingSvg/drawPath.ts"],"names":[],"mappings":"AACA,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,uBAAuB,MAAM,2BAA2B,CAAC;AAChE,OAAO,wBAAwB,MAAM,4BAA4B,CAAC;AASlE,MAAM,CAAC,OAAO,UAAU,QAAQ,CAC9B,gBAAkC,EAClC,aAAqB,EACrB,OAAe,EACf,MAAyC,EACzC,OAQC;IAID,MAAM,YAAY,GAChB,MAAM,CAAC,MAAM,IAAI,MAAM,CAAC,CAAC,CAAC,CAAC,MAAM,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;IAEnE,MAAM,YAAY,GAAG,YAAY,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;IACtD,MAAM,EACJ,KAAK,GAAG,YAAY,EACpB,KAAK,GAAG,EAAE,EACV,SAAS,GAAG,MAAM,EAClB,WAAW,GAAG,CAAC,EACf,SAAS,EACT,QAAQ,EACR,SAAS,GAAG,KAAK,GAClB,GAAG,OAAO,CAAC;IAGZ,MAAM,WAAW,GAAG,SAAS,IAAI,KAAK,CAAC;IAEvC,MAAM,KAAK,GAAG,4BAA4B,CAAC;IAC3C,MAAM,WAAW,GAAG,QAAQ,CAAC,aAAa,EAAE,MAAM,EAAE,OAAO,CAAC,CAAC;IAC7D,MAAM,YAAY,GAAG,gBAAgB,CAAC,UAAU,CAAC,WAAW,CAAC,CAAC;IAC9D,IAAI,eAAe,GAAG,EAAE,CAAC;IAEzB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,SAAS,GAAG,YAAY,CAAC,MAAM,EAAE,CAAC,GAAG,SAAS,EAAE,CAAC,EAAE,EAAE;QACnE,MAAM,MAAM,GAAG,YAAY,CAAC,CAAC,CAAC,CAAC;QAC/B,MAAM,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC;QAEhC,IAAI,SAAS,GAAG,CAAC,EAAE;YACjB,SAAS;SACV;QAED,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,EAAE,CAAC,EAAE,EAAE;YAClC,MAAM,KAAK,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC;YACxB,MAAM,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,GAAG,CAAC;YAE1B,eAAe,IAAI,GAAG,GAAG,IAAI,KAAK,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,KAAK,KAAK,CAAC,CAAC,CAAC,CAAC,OAAO,CACnE,CAAC,CACF,GAAG,CAAC;SACN;QAED,IAAI,SAAS,EAAE;YACb,eAAe,IAAI,IAAI,CAAC;SACzB;KACF;IAED,IAAI,CAAC,eAAe,EAAE;QACpB,OAAO;KACR;IAED,MAAM,UAAU,GAAG;QACjB,CAAC,EAAE,eAAe;QAClB,MAAM,EAAE,KAAK;QACb,IAAI,EAAE,SAAS;QACf,cAAc,EAAE,WAAW;QAC3B,cAAc,EAAE,WAAW;QAC3B,kBAAkB,EAAE,QAAQ;KAC7B,CAAC;IAEF,IAAI,YAAY,EAAE;QAEhB,wBAAwB,CAAC,UAAU,EAAE,YAAY,CAAC,CAAC;QAEnD,gBAAgB,CAAC,cAAc,CAAC,WAAW,CAAC,CAAC;KAC9C;SAAM;QACL,MAAM,OAAO,GAAG,QAAQ,CAAC,eAAe,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC;QAExD,uBAAuB,CAAC,UAAU,EAAE,OAAO,CAAC,CAAC;QAC7C,gBAAgB,CAAC,UAAU,CAAC,OAAO,EAAE,WAAW,CAAC,CAAC;KACnD;AACH,CAAC"}

package/dist/esm/enums/WorkerTypes.js

@@ -4,7 +4,7 @@ var ChangeTypes;
     ChangeTypes["POLYSEG_SURFACE_TO_LABELMAP"] = "polySeg/convertSurfacesToVolumeLabelmap";
     ChangeTypes["POLYSEG_CONTOUR_TO_SURFACE"] = "polySeg/convertContourToSurface";
     ChangeTypes["POLYSEG_LABELMAP_TO_SURFACE"] = "polySeg/convertLabelmapToSurface";
-    ChangeTypes["DISPLAY_TOOL_CLIP_SURFACE"] = "displayTool/clipSurface";
+    ChangeTypes["SURFACE_CLIPPING"] = "surfaceClipping";
 })(ChangeTypes || (ChangeTypes = {}));
 export default ChangeTypes;
 //# sourceMappingURL=WorkerTypes.js.map

package/dist/esm/enums/WorkerTypes.js.map

@@ -1 +1 @@
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+{"version":3,"file":"WorkerTypes.js","sourceRoot":"","sources":["../../../src/enums/WorkerTypes.ts"],"names":[],"mappings":"AAGA,IAAK,WAUJ;AAVD,WAAK,WAAW;IACd,qFAAsE,CAAA;IAEtE,sFAAuE,CAAA;IAEvE,6EAA8D,CAAA;IAE9D,+EAAgE,CAAA;IAEhE,mDAAoC,CAAA;AACtC,CAAC,EAVI,WAAW,KAAX,WAAW,QAUf;AAED,eAAe,WAAW,CAAC"}

package/dist/esm/stateManagement/segmentation/helpers/clipAndCacheSurfacesForViewport.js

@@ -0,0 +1,91 @@
+import { Enums, getWebWorkerManager, eventTarget, triggerEvent, } from '@cornerstonejs/core';
+import { WorkerTypes } from '../../../enums';
+import { pointToString } from '../../../utilities';
+import { registerPolySegWorker } from '../polySeg/registerPolySegWorker';
+const workerManager = getWebWorkerManager();
+const polyDataCache = new Map();
+const surfacesAABBCache = new Map();
+const triggerWorkerProgress = (eventTarget, progress) => {
+    triggerEvent(eventTarget, Enums.Events.WEB_WORKER_PROGRESS, {
+        progress,
+        type: WorkerTypes.SURFACE_CLIPPING,
+    });
+};
+export async function clipAndCacheSurfacesForViewport(surfacesInfo, viewport, segmentationRepresentationUID) {
+    registerPolySegWorker();
+    const planesInfo = viewport.getSlicesClippingPlanes?.();
+    if (!planesInfo) {
+        return;
+    }
+    const currentSliceIndex = viewport.getSliceIndex();
+    planesInfo.sort((a, b) => {
+        const diffA = Math.abs(a.sliceIndex - currentSliceIndex);
+        const diffB = Math.abs(b.sliceIndex - currentSliceIndex);
+        return diffA - diffB;
+    });
+    triggerWorkerProgress(eventTarget, 0);
+    await updateSurfacesAABBCache(surfacesInfo);
+    const surfacesAABB = new Map();
+    surfacesInfo.forEach((surface) => {
+        surfacesAABB.set(surface.id, surfacesAABBCache.get(surface.id));
+    });
+    const camera = viewport.getCamera();
+    await workerManager
+        .executeTask('polySeg', 'cutSurfacesIntoPlanes', {
+        surfacesInfo,
+        planesInfo,
+        surfacesAABB,
+    }, {
+        callbacks: [
+            ({ progress }) => {
+                triggerWorkerProgress(eventTarget, progress);
+            },
+            ({ sliceIndex, polyDataResults }) => {
+                polyDataResults.forEach((polyDataResult, surfaceId) => {
+                    const actorUID = `${segmentationRepresentationUID}_${surfaceId}`;
+                    const cacheId = generateCacheId(viewport, camera.viewPlaneNormal, sliceIndex);
+                    updatePolyDataCache(actorUID, cacheId, polyDataResult);
+                });
+            },
+        ],
+    })
+        .catch((error) => {
+        console.error(error);
+    });
+    triggerWorkerProgress(eventTarget, 1);
+    return polyDataCache;
+}
+async function updateSurfacesAABBCache(surfacesInfo) {
+    const surfacesWithoutAABB = surfacesInfo.filter((surface) => !surfacesAABBCache.has(surface.id));
+    if (!surfacesWithoutAABB.length) {
+        return;
+    }
+    const surfacesAABB = await workerManager.executeTask('polySeg', 'getSurfacesAABBs', {
+        surfacesInfo: surfacesWithoutAABB,
+    }, {
+        callbacks: [
+            ({ progress }) => {
+                triggerWorkerProgress(eventTarget, progress);
+            },
+        ],
+    });
+    surfacesAABB.forEach((aabb, id) => {
+        surfacesAABBCache.set(id, aabb);
+    });
+}
+export function getSurfaceActorUID(segmentationRepresentationUID, surfaceId) {
+    return `${segmentationRepresentationUID}_${surfaceId}`;
+}
+export function generateCacheId(viewport, viewPlaneNormal, sliceIndex) {
+    return `${viewport.id}-${pointToString(viewPlaneNormal)}-${sliceIndex}`;
+}
+export function updatePolyDataCache(actorUID, cacheId, polyDataResult) {
+    const { points, lines, numberOfCells } = polyDataResult;
+    let actorCache = polyDataCache.get(actorUID);
+    if (!actorCache) {
+        actorCache = new Map();
+        polyDataCache.set(actorUID, actorCache);
+    }
+    actorCache.set(cacheId, { points, lines, numberOfCells });
+}
+//# sourceMappingURL=clipAndCacheSurfacesForViewport.js.map

package/dist/esm/stateManagement/segmentation/helpers/clipAndCacheSurfacesForViewport.js.map

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package/dist/esm/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.js

@@ -1,4 +1,7 @@
+import { SegmentationRepresentations } from '../../../../enums';
+import { computeAndAddRepresentation } from '../computeAndAddRepresentation';
+import { computeContourData } from './contourComputationStrategies';
 export function computeAndAddContourRepresentation(segmentationId, options = {}) {
-    throw new Error('Not implemented yet');
+    return computeAndAddRepresentation(segmentationId, SegmentationRepresentations.Contour, () => computeContourData(segmentationId, options), () => undefined);
 }
 //# sourceMappingURL=computeAndAddContourRepresentation.js.map

package/dist/esm/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.js.map

@@ -1 +1 @@
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+{"version":3,"file":"computeAndAddContourRepresentation.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,2BAA2B,EAAE,MAAM,mBAAmB,CAAC;AAEhE,OAAO,EAAE,2BAA2B,EAAE,MAAM,gCAAgC,CAAC;AAC7E,OAAO,EAAE,kBAAkB,EAAE,MAAM,gCAAgC,CAAC;AAUpE,MAAM,UAAU,kCAAkC,CAChD,cAAsB,EACtB,UAAoC,EAAE;IAEtC,OAAO,2BAA2B,CAChC,cAAc,EACd,2BAA2B,CAAC,OAAO,EACnC,GAAG,EAAE,CAAC,kBAAkB,CAAC,cAAc,EAAE,OAAO,CAAC,EACjD,GAAG,EAAE,CAAC,SAAS,CAChB,CAAC;AACJ,CAAC"}

package/dist/esm/stateManagement/segmentation/polySeg/Contour/contourComputationStrategies.js

@@ -0,0 +1,105 @@
+import { cache } from '@cornerstonejs/core';
+import { getUniqueSegmentIndices } from '../../../../utilities/segmentation';
+import { getSegmentation, setSegmentationRepresentationSpecificConfig, } from '../../segmentationState';
+import { computeSurfaceFromLabelmapSegmentation } from '../Surface/surfaceComputationStrategies';
+import { clipAndCacheSurfacesForViewport, } from '../../helpers/clipAndCacheSurfacesForViewport';
+import { extractContourData } from './utils/extractContourData';
+import { createAndAddContourSegmentationsFromClippedSurfaces } from './utils/createAndAddContourSegmentationsFromClippedSurfaces';
+import { getToolGroupForViewport } from '../../../../store/ToolGroupManager';
+export async function computeContourData(segmentationId, options = {}) {
+    const segmentIndices = options.segmentIndices?.length
+        ? options.segmentIndices
+        : getUniqueSegmentIndices(segmentationId);
+    let rawContourData;
+    const segmentation = getSegmentation(segmentationId);
+    const representationData = segmentation.representationData;
+    try {
+        if (representationData.SURFACE) {
+            rawContourData = await computeContourFromSurfaceSegmentation(segmentationId, {
+                segmentIndices,
+                ...options,
+            });
+        }
+        else if (representationData.LABELMAP) {
+            rawContourData = await computeContourFromLabelmapSegmentation(segmentationId, {
+                segmentIndices,
+                ...options,
+            });
+        }
+    }
+    catch (error) {
+        console.error(error);
+        throw error;
+    }
+    if (!rawContourData) {
+        throw new Error('Not enough data to convert to contour, currently only support converting volume labelmap to contour if available');
+    }
+    const { viewport, segmentationRepresentationUID } = options;
+    const annotationUIDsMap = createAndAddContourSegmentationsFromClippedSurfaces(rawContourData, viewport, segmentationId);
+    const toolGroupId = getToolGroupForViewport(viewport.id)?.id;
+    setSegmentationRepresentationSpecificConfig(toolGroupId, segmentationRepresentationUID, {
+        CONTOUR: {
+            fillAlpha: 0,
+        },
+    });
+    return {
+        annotationUIDsMap,
+    };
+}
+async function computeContourFromLabelmapSegmentation(segmentationId, options = {}) {
+    if (!options.viewport) {
+        throw new Error('Viewport is required to compute contour from labelmap');
+    }
+    const results = await computeSurfaceFromLabelmapSegmentation(segmentationId, options);
+    if (!results?.length) {
+        console.error('Failed to convert labelmap to surface or labelmap is empty');
+        return;
+    }
+    const { viewport, segmentationRepresentationUID } = options;
+    const pointsAndPolys = results.map((surface) => {
+        return {
+            id: surface.segmentIndex.toString(),
+            points: surface.data.points,
+            polys: surface.data.polys,
+            segmentIndex: surface.segmentIndex,
+        };
+    });
+    const polyDataCache = await clipAndCacheSurfacesForViewport(pointsAndPolys, viewport, segmentationRepresentationUID);
+    const rawResults = extractContourData(polyDataCache);
+    return rawResults;
+}
+async function computeContourFromSurfaceSegmentation(segmentationId, options = {}) {
+    if (!options.viewport) {
+        throw new Error('Viewport is required to compute contour from surface');
+    }
+    const { viewport, segmentationRepresentationUID } = options;
+    const segmentIndices = options.segmentIndices?.length
+        ? options.segmentIndices
+        : getUniqueSegmentIndices(segmentationId);
+    const segmentIndexToSurfaceId = new Map();
+    const surfaceIdToSegmentIndex = new Map();
+    const segmentation = getSegmentation(segmentationId);
+    const representationData = segmentation.representationData.SURFACE;
+    const surfacesInfo = [];
+    representationData.geometryIds.forEach((geometryId, segmentIndex) => {
+        if (segmentIndices.includes(segmentIndex)) {
+            segmentIndexToSurfaceId.set(segmentIndex, geometryId);
+            const surface = cache.getGeometry(geometryId)?.data;
+            if (surface) {
+                surfacesInfo.push({
+                    id: geometryId,
+                    points: surface.getPoints(),
+                    polys: surface.getPolys(),
+                });
+            }
+        }
+    });
+    segmentIndexToSurfaceId.forEach((surfaceId, segmentIndex) => {
+        surfaceIdToSegmentIndex.set(surfaceId, segmentIndex);
+    });
+    const polyDataCache = await clipAndCacheSurfacesForViewport(surfacesInfo, viewport, segmentationRepresentationUID);
+    const rawResults = extractContourData(polyDataCache, surfaceIdToSegmentIndex);
+    return rawResults;
+}
+export { computeContourFromLabelmapSegmentation };
+//# sourceMappingURL=contourComputationStrategies.js.map

package/dist/esm/stateManagement/segmentation/polySeg/Contour/contourComputationStrategies.js.map

@@ -0,0 +1 @@
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package/dist/esm/stateManagement/segmentation/polySeg/Contour/utils/createAndAddContourSegmentationsFromClippedSurfaces.js

@@ -0,0 +1,72 @@
+import { PlanarFreehandContourSegmentationTool } from '../../../../../tools';
+import { addAnnotation } from '../../../../annotation/annotationState';
+import { utilities } from '@cornerstonejs/core';
+export function createAndAddContourSegmentationsFromClippedSurfaces(rawContourData, viewport, segmentationId) {
+    const annotationUIDsMap = new Map();
+    for (const [segmentIndex, contoursData] of rawContourData) {
+        for (const contourData of contoursData) {
+            const { points } = contourData;
+            const { lineSegments, linesNumberOfPoints } = _extractLineSegments(contourData);
+            for (let i = 0; i < lineSegments.length; i++) {
+                const line = lineSegments[i];
+                const polyline = [];
+                for (let j = 0; j < linesNumberOfPoints[i]; j++) {
+                    const pointIndex = line[j];
+                    polyline.push([
+                        points[3 * pointIndex],
+                        points[3 * pointIndex + 1],
+                        points[3 * pointIndex + 2],
+                    ]);
+                }
+                if (polyline.length < 3) {
+                    continue;
+                }
+                const contourSegmentationAnnotation = {
+                    annotationUID: utilities.uuidv4(),
+                    data: {
+                        contour: {
+                            closed: true,
+                            polyline,
+                        },
+                        segmentation: {
+                            segmentationId,
+                            segmentIndex,
+                        },
+                        handles: {},
+                    },
+                    handles: {},
+                    highlighted: false,
+                    autoGenerated: false,
+                    invalidated: false,
+                    isLocked: false,
+                    isVisible: true,
+                    metadata: {
+                        toolName: PlanarFreehandContourSegmentationTool.toolName,
+                        ...viewport.getViewReference(),
+                    },
+                };
+                addAnnotation(contourSegmentationAnnotation, viewport.element);
+                const currentSet = annotationUIDsMap.get(segmentIndex) || new Set();
+                currentSet.add(contourSegmentationAnnotation.annotationUID);
+                annotationUIDsMap.set(segmentIndex, currentSet);
+            }
+        }
+    }
+    return annotationUIDsMap;
+}
+const _extractLineSegments = (contourData) => {
+    const { numberOfCells, lines } = contourData;
+    const lineSegments = [];
+    const linesNumberOfPoints = [];
+    for (let i = 0; i < lines.length;) {
+        const pointsInLine = lines[i];
+        linesNumberOfPoints.push(pointsInLine);
+        lineSegments.push(lines.slice(i + 1, i + pointsInLine + 1));
+        i += pointsInLine + 1;
+        if (lineSegments.length === numberOfCells) {
+            break;
+        }
+    }
+    return { lineSegments, linesNumberOfPoints };
+};
+//# sourceMappingURL=createAndAddContourSegmentationsFromClippedSurfaces.js.map

package/dist/esm/stateManagement/segmentation/polySeg/Contour/utils/createAndAddContourSegmentationsFromClippedSurfaces.js.map

@@ -0,0 +1 @@
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package/dist/esm/stateManagement/segmentation/polySeg/Contour/utils/extractContourData.js

@@ -0,0 +1,21 @@
+export function extractContourData(polyDataCache, segmentIndexMap) {
+    const rawResults = new Map();
+    for (const [cacheId, intersectionInfo] of polyDataCache) {
+        const surfaceId = cacheId.split('_')[1];
+        for (const [_, result] of intersectionInfo) {
+            if (!result) {
+                continue;
+            }
+            const segmentIndex = Number(surfaceId) || segmentIndexMap?.get(surfaceId);
+            if (!segmentIndex) {
+                continue;
+            }
+            if (!rawResults.has(segmentIndex)) {
+                rawResults.set(segmentIndex, []);
+            }
+            rawResults.get(segmentIndex).push(result);
+        }
+    }
+    return rawResults;
+}
+//# sourceMappingURL=extractContourData.js.map

package/dist/esm/stateManagement/segmentation/polySeg/Contour/utils/extractContourData.js.map

@@ -0,0 +1 @@
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package/dist/esm/stateManagement/segmentation/polySeg/Contour/utils/updateContoursOnCameraModified.js

@@ -0,0 +1,26 @@
+import { utilities, Enums } from '@cornerstonejs/core';
+import { extractContourData } from './extractContourData';
+import { clipAndCacheSurfacesForViewport } from '../../../helpers/clipAndCacheSurfacesForViewport';
+import { createAndAddContourSegmentationsFromClippedSurfaces } from './createAndAddContourSegmentationsFromClippedSurfaces';
+const currentViewportNormal = new Map();
+export function updateContoursOnCameraModified(surfacesInfo, viewport, segmentationRepresentationUID) {
+    async function cameraModifiedCallback(evt) {
+        const { camera } = evt.detail;
+        const { viewPlaneNormal } = camera;
+        const surface1 = surfacesInfo[0];
+        const currentNormal = currentViewportNormal.get(surface1.id);
+        if (utilities.isEqual(viewPlaneNormal, currentNormal)) {
+            return;
+        }
+        currentViewportNormal.set(surface1.id, viewPlaneNormal);
+        const polyDataCache = await clipAndCacheSurfacesForViewport(surfacesInfo, viewport, segmentationRepresentationUID);
+        const results = extractContourData(polyDataCache);
+        createAndAddContourSegmentationsFromClippedSurfaces(results, viewport, segmentationRepresentationUID);
+        viewport.render();
+    }
+    const camera = viewport.getCamera();
+    currentViewportNormal.set(surfacesInfo[0].id, camera.viewPlaneNormal);
+    viewport.element.removeEventListener(Enums.Events.CAMERA_MODIFIED, cameraModifiedCallback);
+    viewport.element.addEventListener(Enums.Events.CAMERA_MODIFIED);
+}
+//# sourceMappingURL=updateContoursOnCameraModified.js.map

package/dist/esm/stateManagement/segmentation/polySeg/Contour/utils/updateContoursOnCameraModified.js.map

@@ -0,0 +1 @@
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package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.js

@@ -44,7 +44,7 @@ export async function convertContourToVolumeLabelmap(contourRepresentationData,
             },
         ],
     });
-    triggerWorkerProgress(eventTarget, 100);
+    triggerWorkerProgress(eventTarget, 1);
     segmentationVolume.imageData
         .getPointData()
         .getScalars()
@@ -109,7 +109,7 @@ export async function convertContourToStackLabelmap(contourRepresentationData, o
             },
         ],
     });
-    triggerWorkerProgress(eventTarget, 100);
+    triggerWorkerProgress(eventTarget, 1);
     const imageIdReferenceMap = new Map();
     newSegmentationsScalarData.forEach(({ scalarData }, referencedImageId) => {
         const segmentationInfo = segmentationsInfo.get(referencedImageId);

package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.js.map

@@ -1 +1 @@
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+{"version":3,"file":"convertContourToLabelmap.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AACjC,OAAO,EAEL,KAAK,EACL,SAAS,EACT,mBAAmB,EACnB,YAAY,EACZ,WAAW,EACX,QAAQ,EACR,KAAK,EACL,YAAY,EACZ,WAAW,GACZ,MAAM,qBAAqB,CAAC;AAM7B,OAAO,EAAE,aAAa,EAAE,MAAM,UAAU,CAAC;AACzC,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAEhD,MAAM,aAAa,GAAG,mBAAmB,EAAE,CAAC;AAE5C,MAAM,qBAAqB,GAAG,CAAC,WAAW,EAAE,QAAQ,EAAE,EAAE;IACtD,YAAY,CAAC,WAAW,EAAE,KAAK,CAAC,MAAM,CAAC,mBAAmB,EAAE;QAC1D,QAAQ;QACR,IAAI,EAAE,WAAW,CAAC,2BAA2B;KAC9C,CAAC,CAAC;AACL,CAAC,CAAC;AAEF,MAAM,CAAC,KAAK,UAAU,8BAA8B,CAClD,yBAAkD,EAClD,UAAoC,EAAE;IAEtC,MAAM,EAAE,QAAQ,EAAE,GAAG,OAAO,CAAC;IAE7B,MAAM,QAAQ,GAAG,SAAS,CAAC,mBAAmB,CAAC,QAAQ,CAAC,CAAC;IAEzD,IAAI,CAAC,QAAQ,EAAE;QACb,MAAM,IAAI,KAAK,CACb,uFAAuF,CACxF,CAAC;KACH;IAED,MAAM,oBAAoB,GAAG,SAAS,CAAC,MAAM,EAAE,CAAC;IAEhD,MAAM,WAAW,GAAG,SAAS,CAAC,+BAA+B,CAC3D,QAAQ,EACR,oBAAoB,CACrB,CAAC;IAEF,MAAM,EAAE,QAAQ,EAAE,UAAU,EAAE,MAAM,EAAE,SAAS,EAAE,OAAO,EAAE,UAAU,EAAE,GACpE,WAAW,CAAC;IAEd,MAAM,kBAAkB,GAAG,MAAM,YAAY,CAAC,6BAA6B,CACzE;QACE,UAAU;QACV,MAAM;QACN,SAAS;QACT,OAAO;QACP,QAAQ;QACR,QAAQ,EAAE,QAAQ,CAAC,GAAG,CAAC,CAAC,OAAO,EAAE,EAAE,CAAC,eAAe,OAAO,EAAE,CAAC;QAC7D,kBAAkB,EAAE,QAAQ;KAC7B,EACD,oBAAoB,CACrB,CAAC;IAEF,MAAM,EAAE,cAAc,EAAE,0BAA0B,EAAE,GAClD,iCAAiC,CAAC,yBAAyB,EAAE,OAAO,CAAC,CAAC;IAExE,qBAAqB,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC;IAEtC,MAAM,aAAa,GAAG,MAAM,aAAa,CAAC,WAAW,CACnD,SAAS,EACT,gCAAgC,EAChC;QACE,cAAc;QACd,UAAU;QACV,UAAU;QACV,MAAM;QACN,SAAS;QACT,OAAO;QACP,0BAA0B;KAC3B,EACD;QACE,SAAS,EAAE;YACT,CAAC,QAAQ,EAAE,EAAE;gBACX,qBAAqB,CAAC,WAAW,EAAE,QAAQ,CAAC,CAAC;YAC/C,CAAC;SACF;KACF,CACF,CAAC;IAEF,qBAAqB,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC;IAEtC,kBAAkB,CAAC,SAAS;SACzB,YAAY,EAAE;SACd,UAAU,EAAE;SACZ,OAAO,CAAC,aAAa,CAAC,CAAC;IAC1B,kBAAkB,CAAC,SAAS,CAAC,QAAQ,EAAE,CAAC;IAGxC,kBAAkB,CAAC,QAAQ,EAAE,CAAC;IAE9B,OAAO;QACL,QAAQ,EAAE,kBAAkB,CAAC,QAAQ;KACtC,CAAC;AACJ,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,6BAA6B,CACjD,yBAAkD,EAClD,UAAoC,EAAE;IAEtC,IAAI,CAAC,OAAO,CAAC,QAAQ,EAAE;QACrB,MAAM,IAAI,KAAK,CACb,4EAA4E,CAC7E,CAAC;KACH;IAED,MAAM,QAAQ,GAAG,OAAO,CAAC,QAAgC,CAAC;IAE1D,MAAM,QAAQ,GAAG,QAAQ,CAAC,WAAW,EAAE,CAAC;IAExC,IAAI,CAAC,QAAQ,EAAE;QACb,MAAM,IAAI,KAAK,CACb,uFAAuF,CACxF,CAAC;KACH;IAGD,QAAQ,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,EAAE;QAC3B,IAAI,CAAC,KAAK,CAAC,kBAAkB,CAAC,OAAO,CAAC,EAAE;YACtC,MAAM,IAAI,KAAK,CACb,+DAA+D,CAChE,CAAC;SACH;IACH,CAAC,CAAC,CAAC;IAGH,MAAM,EAAE,QAAQ,EAAE,oBAAoB,EAAE,GACtC,MAAM,WAAW,CAAC,uCAAuC,CAAC,QAAQ,CAAC,CAAC;IAEtE,MAAM,EAAE,cAAc,EAAE,0BAA0B,EAAE,GAClD,iCAAiC,CAAC,yBAAyB,EAAE,OAAO,CAAC,CAAC;IAIxE,MAAM,iBAAiB,GAAG,IAAI,GAAG,EAAE,CAAC;IAGpC,oBAAoB,CAAC,OAAO,CAAC,CAAC,UAAU,EAAE,KAAK,EAAE,EAAE;QAEjD,MAAM,QAAQ,GAAG,KAAK,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;QAG5C,MAAM,gBAAgB,GAAG,QAAQ,CAAC,GAAG,CACnC,KAAK,CAAC,eAAe,CAAC,WAAW,EACjC,UAAU,CACX,CAAC;QAGF,IAAI,EACF,aAAa,EACb,UAAU,EACV,eAAe,EACf,kBAAkB,EAClB,oBAAoB,GACrB,GAAG,gBAAgB,CAAC;QAGrB,aAAa,GAAG,aAAa,IAAI,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;QAC3C,UAAU,GAAG,UAAU,IAAI,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;QACrC,eAAe,GAAG,eAAe,IAAI,CAAC,CAAC;QACvC,kBAAkB,GAAG,kBAAkB,IAAI,CAAC,CAAC;QAC7C,oBAAoB,GAAG,oBAAoB,IAAI,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;QAGzD,MAAM,YAAY,GAAG,IAAI,CAAC,UAAU,CAClC,UAAU,CAAC,CAAC,CAAC,EACb,UAAU,CAAC,CAAC,CAAC,EACb,UAAU,CAAC,CAAC,CAAC,CACd,CAAC;QACF,MAAM,YAAY,GAAG,IAAI,CAAC,UAAU,CAClC,aAAa,CAAC,CAAC,CAAC,EAChB,aAAa,CAAC,CAAC,CAAC,EAChB,aAAa,CAAC,CAAC,CAAC,CACjB,CAAC;QAGF,MAAM,cAAc,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC;QACrC,IAAI,CAAC,KAAK,CAAC,cAAc,EAAE,YAAY,EAAE,YAAY,CAAC,CAAC;QAGvD,MAAM,SAAS,GAAG,CAAC,GAAG,YAAY,EAAE,GAAG,YAAY,EAAE,GAAG,cAAc,CAAC,CAAC;QACxE,MAAM,OAAO,GAAG,CAAC,eAAe,EAAE,kBAAkB,EAAE,CAAC,CAAC,CAAC;QAGzD,MAAM,MAAM,GAAG,oBAAoB,CAAC;QAGpC,iBAAiB,CAAC,GAAG,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;YACrC,SAAS;YACT,OAAO;YACP,MAAM;YACN,UAAU,EAAE,QAAQ,CAAC,YAAY,EAAE;YACnC,OAAO,EAAE,UAAU;YACnB,UAAU,EAAE,CAAC,QAAQ,CAAC,KAAK,EAAE,QAAQ,CAAC,MAAM,EAAE,CAAC,CAAC;SACjD,CAAC,CAAC;IACL,CAAC,CAAC,CAAC;IAEH,qBAAqB,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC;IAEtC,MAAM,0BAA0B,GAAG,MAAM,aAAa,CAAC,WAAW,CAChE,SAAS,EACT,+BAA+B,EAC/B;QACE,iBAAiB;QACjB,0BAA0B;QAC1B,cAAc;KACf,EACD;QACE,SAAS,EAAE;YACT,CAAC,QAAQ,EAAE,EAAE;gBACX,qBAAqB,CAAC,WAAW,EAAE,QAAQ,CAAC,CAAC;YAC/C,CAAC;SACF;KACF,CACF,CAAC;IAEF,qBAAqB,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC;IAEtC,MAAM,mBAAmB,GAAG,IAAI,GAAG,EAAE,CAAC;IACtC,0BAA0B,CAAC,OAAO,CAAC,CAAC,EAAE,UAAU,EAAE,EAAE,iBAAiB,EAAE,EAAE;QACvE,MAAM,gBAAgB,GAAG,iBAAiB,CAAC,GAAG,CAAC,iBAAiB,CAAC,CAAC;QAClE,MAAM,EAAE,OAAO,EAAE,UAAU,EAAE,GAAG,gBAAgB,CAAC;QAEjD,MAAM,QAAQ,GAAG,KAAK,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;QAC5C,QAAQ,CAAC,YAAY,EAAE,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;QACxC,QAAQ,CAAC,UAAU,EAAE,SAAS,EAAE,GAAG,CAAC,UAAU,CAAC,CAAC;QAEhD,mBAAmB,CAAC,GAAG,CAAC,iBAAiB,EAAE,UAAU,CAAC,CAAC;IACzD,CAAC,CAAC,CAAC;IAEH,OAAO;QACL,mBAAmB;KACpB,CAAC;AACJ,CAAC;AAED,SAAS,iCAAiC,CACxC,yBAAkD,EAClD,UAAoC,EAAE;IAEtC,MAAM,aAAa,GAAG,yBAAyB,CAAC,iBAAiB,CAAC;IAElE,MAAM,cAAc,GAAG,OAAO,CAAC,cAAc,E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package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js

@@ -38,7 +38,7 @@ export async function convertSurfaceToVolumeLabelmap(surfaceRepresentationData,
             },
         ],
     });
-    triggerWorkerProgress(eventTarget, 100);
+    triggerWorkerProgress(eventTarget, 1);
     segmentationVolume.imageData
         .getPointData()
         .getScalars()

package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js.map

@@ -1 +1 @@
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