@cornerstonejs/tools 1.22.0 → 1.23.0

package/dist/esm/tools/displayTools/Surface/surfaceDisplay.js

@@ -0,0 +1,101 @@
+import { cache, getEnabledElementByIds, utilities, Enums, } from '@cornerstonejs/core';
+import * as SegmentationState from '../../../stateManagement/segmentation/segmentationState';
+import * as SegmentationConfig from '../../../stateManagement/segmentation/config/segmentationConfig';
+import Representations from '../../../enums/SegmentationRepresentations';
+import { getToolGroup } from '../../../store/ToolGroupManager';
+import removeSurfaceFromElement from './removeSurfaceFromElement';
+import addSurfaceToElement from './addSurfaceToElement';
+async function addSegmentationRepresentation(toolGroupId, representationInput, toolGroupSpecificConfig) {
+    const { segmentationId } = representationInput;
+    const segmentationRepresentationUID = utilities.uuidv4();
+    const segmentsHidden = new Set();
+    const colorLUTIndex = 0;
+    const active = true;
+    const toolGroupSpecificRepresentation = {
+        segmentationId,
+        segmentationRepresentationUID,
+        type: Representations.Surface,
+        segmentsHidden,
+        colorLUTIndex,
+        active,
+        segmentationRepresentationSpecificConfig: {},
+        segmentSpecificConfig: {},
+        config: {},
+    };
+    if (toolGroupSpecificConfig) {
+        const currentToolGroupConfig = SegmentationConfig.getToolGroupSpecificConfig(toolGroupId);
+        const mergedConfig = utilities.deepMerge(currentToolGroupConfig, toolGroupSpecificConfig);
+        SegmentationConfig.setToolGroupSpecificConfig(toolGroupId, {
+            renderInactiveSegmentations: mergedConfig.renderInactiveSegmentations || true,
+            representations: {
+                ...mergedConfig.representations,
+            },
+        });
+    }
+    SegmentationState.addSegmentationRepresentation(toolGroupId, toolGroupSpecificRepresentation);
+    return segmentationRepresentationUID;
+}
+function removeSegmentationRepresentation(toolGroupId, segmentationRepresentationUID, renderImmediate = false) {
+    _removeSurfaceFromToolGroupViewports(toolGroupId, segmentationRepresentationUID);
+    SegmentationState.removeSegmentationRepresentation(toolGroupId, segmentationRepresentationUID);
+    if (renderImmediate) {
+        const viewportsInfo = getToolGroup(toolGroupId).getViewportsInfo();
+        viewportsInfo.forEach(({ viewportId, renderingEngineId }) => {
+            const enabledElement = getEnabledElementByIds(viewportId, renderingEngineId);
+            enabledElement.viewport.render();
+        });
+    }
+}
+async function render(viewport, representation, toolGroupConfig) {
+    const { colorLUTIndex, active, segmentationId, segmentationRepresentationUID, segmentsHidden, } = representation;
+    const segmentation = SegmentationState.getSegmentation(segmentationId);
+    const SurfaceData = segmentation.representationData[Representations.Surface];
+    const { geometryId } = SurfaceData;
+    if (!geometryId) {
+        console.warn(`No Surfaces found for segmentationId ${segmentationId}. Skipping render.`);
+    }
+    const geometry = cache.getGeometry(geometryId);
+    if (!geometry) {
+        throw new Error(`No Surfaces found for geometryId ${geometryId}`);
+    }
+    if (geometry.type !== Enums.GeometryType.SURFACE) {
+        throw new Error(`Geometry type ${geometry.type} not supported for rendering.`);
+    }
+    if (!geometry.data) {
+        console.warn(`No Surfaces found for geometryId ${geometryId}. Skipping render.`);
+        return;
+    }
+    const surface = geometry.data;
+    const surfaceUID = `${segmentationRepresentationUID}_${surface.id}}`;
+    _renderSurface(viewport, surface, surfaceUID);
+    viewport.resetCamera();
+    viewport.render();
+}
+function _renderSurface(viewport, surface, surfaceUID) {
+    const actorUID = surfaceUID;
+    const actorEntry = viewport.getActor(actorUID);
+    if (!actorEntry) {
+        addSurfaceToElement(viewport.element, surface, actorUID);
+    }
+    else {
+        throw new Error('Not implemented yet. (Update surface)');
+    }
+}
+function _removeSurfaceFromToolGroupViewports(toolGroupId, segmentationRepresentationUID) {
+    const toolGroup = getToolGroup(toolGroupId);
+    if (toolGroup === undefined) {
+        throw new Error(`ToolGroup with ToolGroupId ${toolGroupId} does not exist`);
+    }
+    const { viewportsInfo } = toolGroup;
+    for (const viewportInfo of viewportsInfo) {
+        const { viewportId, renderingEngineId } = viewportInfo;
+        const enabledElement = getEnabledElementByIds(viewportId, renderingEngineId);
+        removeSurfaceFromElement(enabledElement.viewport.element, segmentationRepresentationUID);
+    }
+}
+export default {
+    render,
+    addSegmentationRepresentation,
+    removeSegmentationRepresentation,
+};
+//# sourceMappingURL=surfaceDisplay.js.map

package/dist/esm/tools/displayTools/Surface/surfaceDisplay.js.map

@@ -0,0 +1 @@
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package/dist/esm/tools/index.d.ts

@@ -13,6 +13,7 @@ import MagnifyTool from './MagnifyTool';
 import AdvancedMagnifyTool from './AdvancedMagnifyTool';
 import ReferenceLinesTool from './ReferenceLinesTool';
 import OverlayGridTool from './OverlayGridTool';
+import SegmentationIntersectionTool from './SegmentationIntersectionTool';
 import BidirectionalTool from './annotation/BidirectionalTool';
 import LengthTool from './annotation/LengthTool';
 import ProbeTool from './annotation/ProbeTool';
@@ -36,4 +37,4 @@ import RectangleROIStartEndThresholdTool from './segmentation/RectangleROIStartE
 import BrushTool from './segmentation/BrushTool';
 import PaintFillTool from './segmentation/PaintFillTool';
 import OrientationMarkerTool from './OrientationMarkerTool';
-export { BaseTool, AnnotationTool, AnnotationDisplayTool, PanTool, TrackballRotateTool, DragProbeTool, WindowLevelTool, StackScrollTool, PlanarRotateTool, StackScrollMouseWheelTool, ZoomTool, VolumeRotateMouseWheelTool, MIPJumpToClickTool, CrosshairsTool, ReferenceLinesTool, OverlayGridTool, BidirectionalTool, LengthTool, ProbeTool, RectangleROITool, EllipticalROITool, CircleROITool, PlanarFreehandROITool, ArrowAnnotateTool, AngleTool, CobbAngleTool, ReferenceCursors, SegmentationDisplayTool, RectangleScissorsTool, CircleScissorsTool, SphereScissorsTool, RectangleROIThresholdTool, RectangleROIStartEndThresholdTool, BrushTool, MagnifyTool, AdvancedMagnifyTool, ReferenceLines, PaintFillTool, ScaleOverlayTool, OrientationMarkerTool, };
+export { BaseTool, AnnotationTool, AnnotationDisplayTool, PanTool, TrackballRotateTool, DragProbeTool, WindowLevelTool, StackScrollTool, PlanarRotateTool, StackScrollMouseWheelTool, ZoomTool, VolumeRotateMouseWheelTool, MIPJumpToClickTool, CrosshairsTool, ReferenceLinesTool, OverlayGridTool, SegmentationIntersectionTool, BidirectionalTool, LengthTool, ProbeTool, RectangleROITool, EllipticalROITool, CircleROITool, PlanarFreehandROITool, ArrowAnnotateTool, AngleTool, CobbAngleTool, ReferenceCursors, SegmentationDisplayTool, RectangleScissorsTool, CircleScissorsTool, SphereScissorsTool, RectangleROIThresholdTool, RectangleROIStartEndThresholdTool, BrushTool, MagnifyTool, AdvancedMagnifyTool, ReferenceLines, PaintFillTool, ScaleOverlayTool, OrientationMarkerTool, };

package/dist/esm/tools/index.js

@@ -13,6 +13,7 @@ import MagnifyTool from './MagnifyTool';
 import AdvancedMagnifyTool from './AdvancedMagnifyTool';
 import ReferenceLinesTool from './ReferenceLinesTool';
 import OverlayGridTool from './OverlayGridTool';
+import SegmentationIntersectionTool from './SegmentationIntersectionTool';
 import BidirectionalTool from './annotation/BidirectionalTool';
 import LengthTool from './annotation/LengthTool';
 import ProbeTool from './annotation/ProbeTool';
@@ -36,5 +37,5 @@ import RectangleROIStartEndThresholdTool from './segmentation/RectangleROIStartE
 import BrushTool from './segmentation/BrushTool';
 import PaintFillTool from './segmentation/PaintFillTool';
 import OrientationMarkerTool from './OrientationMarkerTool';
-export { BaseTool, AnnotationTool, AnnotationDisplayTool, PanTool, TrackballRotateTool, DragProbeTool, WindowLevelTool, StackScrollTool, PlanarRotateTool, StackScrollMouseWheelTool, ZoomTool, VolumeRotateMouseWheelTool, MIPJumpToClickTool, CrosshairsTool, ReferenceLinesTool, OverlayGridTool, BidirectionalTool, LengthTool, ProbeTool, RectangleROITool, EllipticalROITool, CircleROITool, PlanarFreehandROITool, ArrowAnnotateTool, AngleTool, CobbAngleTool, ReferenceCursors, SegmentationDisplayTool, RectangleScissorsTool, CircleScissorsTool, SphereScissorsTool, RectangleROIThresholdTool, RectangleROIStartEndThresholdTool, BrushTool, MagnifyTool, AdvancedMagnifyTool, ReferenceLines, PaintFillTool, ScaleOverlayTool, OrientationMarkerTool, };
+export { BaseTool, AnnotationTool, AnnotationDisplayTool, PanTool, TrackballRotateTool, DragProbeTool, WindowLevelTool, StackScrollTool, PlanarRotateTool, StackScrollMouseWheelTool, ZoomTool, VolumeRotateMouseWheelTool, MIPJumpToClickTool, CrosshairsTool, ReferenceLinesTool, OverlayGridTool, SegmentationIntersectionTool, BidirectionalTool, LengthTool, ProbeTool, RectangleROITool, EllipticalROITool, CircleROITool, PlanarFreehandROITool, ArrowAnnotateTool, AngleTool, CobbAngleTool, ReferenceCursors, SegmentationDisplayTool, RectangleScissorsTool, CircleScissorsTool, SphereScissorsTool, RectangleROIThresholdTool, RectangleROIStartEndThresholdTool, BrushTool, MagnifyTool, AdvancedMagnifyTool, ReferenceLines, PaintFillTool, ScaleOverlayTool, OrientationMarkerTool, };
 //# sourceMappingURL=index.js.map

package/dist/esm/tools/index.js.map

@@ -1 +1 @@
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package/dist/esm/types/SegmentationStateTypes.d.ts

@@ -1,6 +1,7 @@
 import * as Enums from '../enums';
 import { ContourConfig, ContourRenderingConfig, ContourSegmentationData } from './ContourTypes';
 import type { LabelmapConfig, LabelmapRenderingConfig, LabelmapSegmentationData } from './LabelmapTypes';
+import { SurfaceSegmentationData, SurfaceRenderingConfig } from './SurfaceTypes';
 export declare type Color = [number, number, number, number];
 export declare type ColorLUT = Array<Color>;
 export declare type SegmentSpecificRepresentationConfig = {
@@ -9,6 +10,7 @@ export declare type SegmentSpecificRepresentationConfig = {
 export declare type RepresentationConfig = {
     LABELMAP?: LabelmapConfig;
     CONTOUR?: ContourConfig;
+    SURFACE?: any;
 };
 export declare type SegmentationRepresentationConfig = {
     renderInactiveSegmentations: boolean;
@@ -17,6 +19,7 @@ export declare type SegmentationRepresentationConfig = {
 export declare type SegmentationRepresentationData = {
     LABELMAP?: LabelmapSegmentationData;
     CONTOUR?: ContourSegmentationData;
+    SURFACE?: SurfaceSegmentationData;
 };
 export declare type Segmentation = {
     segmentationId: string;
@@ -50,6 +53,11 @@ export declare type ToolGroupSpecificContourRepresentation = ToolGroupSpecificRe
     segmentationRepresentationSpecificConfig?: RepresentationConfig;
     segmentSpecificConfig?: SegmentSpecificRepresentationConfig;
 };
+export declare type ToolGroupSpecificSurfaceRepresentation = ToolGroupSpecificRepresentationState & {
+    config: SurfaceRenderingConfig;
+    segmentationRepresentationSpecificConfig?: RepresentationConfig;
+    segmentSpecificConfig?: SegmentSpecificRepresentationConfig;
+};
 export declare type ToolGroupSpecificRepresentation = ToolGroupSpecificLabelmapRepresentation | ToolGroupSpecificContourRepresentation;
 export declare type ToolGroupSpecificRepresentations = Array<ToolGroupSpecificRepresentation>;
 export declare type SegmentationState = {
@@ -67,7 +75,7 @@ export declare type SegmentationPublicInput = {
     segmentationId: string;
     representation: {
         type: Enums.SegmentationRepresentations;
-        data: LabelmapSegmentationData | ContourSegmentationData;
+        data: LabelmapSegmentationData | ContourSegmentationData | SurfaceSegmentationData;
     };
 };
 export declare type RepresentationPublicInput = {

package/dist/esm/types/SurfaceTypes.d.ts

@@ -0,0 +1,4 @@
+export declare type SurfaceRenderingConfig = {};
+export declare type SurfaceSegmentationData = {
+    geometryId: string;
+};

package/dist/esm/types/SurfaceTypes.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=SurfaceTypes.js.map

package/dist/esm/types/SurfaceTypes.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"SurfaceTypes.js","sourceRoot":"","sources":["../../../src/types/SurfaceTypes.ts"],"names":[],"mappings":""}

package/dist/esm/utilities/dynamicVolume/getDataInTime.js

@@ -1,25 +1,20 @@
 import { utilities, cache } from '@cornerstonejs/core';
+import { getVoxelOverlap } from '../segmentation/utilities';
+import pointInShapeCallback from '../pointInShapeCallback';
 function getDataInTime(dynamicVolume, options) {
     let dataInTime;
     const frames = options.frameNumbers || [
         ...Array(dynamicVolume.numTimePoints).keys(),
     ];
     if (!options.maskVolumeId && !options.imageCoordinate) {
-        throw new Error('No ROI provided');
+        throw new Error('You should provide either maskVolumeId or imageCoordinate');
     }
     if (options.maskVolumeId && options.imageCoordinate) {
-        throw new Error('Please provide only one ROI');
+        throw new Error('You can only use one of maskVolumeId or imageCoordinate');
     }
     if (options.maskVolumeId) {
         const segmentationVolume = cache.getVolume(options.maskVolumeId);
-        const segScalarData = segmentationVolume.getScalarData();
-        const indexArray = [];
-        for (let i = 0, len = segScalarData.length; i < len; i++) {
-            if (segScalarData[i] !== 0) {
-                indexArray.push(i);
-            }
-        }
-        const dataInTime = _getTimePointDataMask(frames, indexArray, dynamicVolume);
+        const dataInTime = _getTimePointDataMask(frames, dynamicVolume, segmentationVolume);
         return dataInTime;
     }
     if (options.imageCoordinate) {
@@ -48,18 +43,60 @@ function _getTimePointDataCoordinate(frames, coordinate, volume) {
     });
     return value;
 }
-function _getTimePointDataMask(frames, indexArray, volume) {
-    const allScalarData = volume.getScalarDataArrays();
-    const value = [];
-    for (let i = 0; i < indexArray.length; i++) {
-        const indexValues = [];
-        frames.forEach((frame) => {
-            const activeScalarData = allScalarData[frame];
-            indexValues.push(activeScalarData[indexArray[i]]);
-        });
-        value.push(indexValues);
+function _getTimePointDataMask(frames, dynamicVolume, segmentationVolume) {
+    const { imageData: maskImageData } = segmentationVolume;
+    const segScalarData = segmentationVolume.getScalarData();
+    const len = segScalarData.length;
+    const nonZeroVoxelIndices = [];
+    nonZeroVoxelIndices.length = len;
+    let actualLen = 0;
+    for (let i = 0, len = segScalarData.length; i < len; i++) {
+        if (segScalarData[i] !== 0) {
+            nonZeroVoxelIndices[actualLen++] = i;
+        }
     }
-    return value;
+    nonZeroVoxelIndices.length = actualLen;
+    const dynamicVolumeScalarDataArray = dynamicVolume.getScalarDataArrays();
+    const values = [];
+    const isSameVolume = dynamicVolumeScalarDataArray[0].length === len &&
+        JSON.stringify(dynamicVolume.spacing) ===
+            JSON.stringify(segmentationVolume.spacing);
+    if (isSameVolume) {
+        for (let i = 0; i < nonZeroVoxelIndices.length; i++) {
+            const indexValues = [];
+            frames.forEach((frame) => {
+                const activeScalarData = dynamicVolumeScalarDataArray[frame];
+                indexValues.push(activeScalarData[nonZeroVoxelIndices[i]]);
+            });
+            values.push(indexValues);
+        }
+        return values;
+    }
+    const callback = ({ pointLPS: segPointLPS, value: segValue }) => {
+        if (segValue === 0) {
+            return;
+        }
+        const overlapIJKMinMax = getVoxelOverlap(dynamicVolume.imageData, dynamicVolume.dimensions, dynamicVolume.spacing, segPointLPS);
+        let count = 0;
+        const perFrameSum = new Map();
+        frames.forEach((frame) => perFrameSum.set(frame, 0));
+        const averageCallback = ({ index }) => {
+            for (let i = 0; i < frames.length; i++) {
+                const value = dynamicVolumeScalarDataArray[i][index];
+                const frame = frames[i];
+                perFrameSum.set(frame, perFrameSum.get(frame) + value);
+            }
+            count++;
+        };
+        pointInShapeCallback(dynamicVolume.imageData, () => true, averageCallback, overlapIJKMinMax);
+        const averageValues = [];
+        perFrameSum.forEach((sum) => {
+            averageValues.push(sum / count);
+        });
+        values.push(averageValues);
+    };
+    pointInShapeCallback(maskImageData, () => true, callback);
+    return values;
 }
 export default getDataInTime;
 //# sourceMappingURL=getDataInTime.js.map

package/dist/esm/utilities/dynamicVolume/getDataInTime.js.map

@@ -1 +1 @@
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package/dist/esm/utilities/index.d.ts

@@ -11,6 +11,7 @@ import pointInShapeCallback from './pointInShapeCallback';
 import pointInSurroundingSphereCallback from './pointInSurroundingSphereCallback';
 import scroll from './scroll';
 import roundNumber from './roundNumber';
+import { pointToString } from './pointToString';
 import * as segmentation from './segmentation';
 import * as drawing from './drawing';
 import * as math from './math';
@@ -25,5 +26,6 @@ import { stackPrefetch, stackContextPrefetch } from './stackPrefetch';
 import * as viewport from './viewport';
 import * as touch from './touch';
 import * as dynamicVolume from './dynamicVolume';
+import * as polyDataUtils from './polyData/utils';
 import { triggerEvent } from '@cornerstonejs/core';
-export { math, planar, viewportFilters, drawing, debounce, dynamicVolume, throttle, orientation, isObject, touch, triggerEvent, calibrateImageSpacing, segmentation, triggerAnnotationRenderForViewportIds, triggerAnnotationRender, pointInShapeCallback, pointInSurroundingSphereCallback, getAnnotationNearPoint, getAnnotationNearPointOnEnabledElement, jumpToSlice, viewport, cine, clip, boundingBox, rectangleROITool, planarFreehandROITool, stackPrefetch, stackContextPrefetch, scroll, roundNumber, };
+export { math, planar, viewportFilters, drawing, debounce, dynamicVolume, throttle, orientation, isObject, touch, triggerEvent, calibrateImageSpacing, segmentation, triggerAnnotationRenderForViewportIds, triggerAnnotationRender, pointInShapeCallback, pointInSurroundingSphereCallback, getAnnotationNearPoint, getAnnotationNearPointOnEnabledElement, jumpToSlice, viewport, cine, clip, boundingBox, rectangleROITool, planarFreehandROITool, stackPrefetch, stackContextPrefetch, scroll, roundNumber, pointToString, polyDataUtils, };

package/dist/esm/utilities/index.js

@@ -11,6 +11,7 @@ import pointInShapeCallback from './pointInShapeCallback';
 import pointInSurroundingSphereCallback from './pointInSurroundingSphereCallback';
 import scroll from './scroll';
 import roundNumber from './roundNumber';
+import { pointToString } from './pointToString';
 import * as segmentation from './segmentation';
 import * as drawing from './drawing';
 import * as math from './math';
@@ -25,6 +26,7 @@ import { stackPrefetch, stackContextPrefetch } from './stackPrefetch';
 import * as viewport from './viewport';
 import * as touch from './touch';
 import * as dynamicVolume from './dynamicVolume';
+import * as polyDataUtils from './polyData/utils';
 import { triggerEvent } from '@cornerstonejs/core';
-export { math, planar, viewportFilters, drawing, debounce, dynamicVolume, throttle, orientation, isObject, touch, triggerEvent, calibrateImageSpacing, segmentation, triggerAnnotationRenderForViewportIds, triggerAnnotationRender, pointInShapeCallback, pointInSurroundingSphereCallback, getAnnotationNearPoint, getAnnotationNearPointOnEnabledElement, jumpToSlice, viewport, cine, clip, boundingBox, rectangleROITool, planarFreehandROITool, stackPrefetch, stackContextPrefetch, scroll, roundNumber, };
+export { math, planar, viewportFilters, drawing, debounce, dynamicVolume, throttle, orientation, isObject, touch, triggerEvent, calibrateImageSpacing, segmentation, triggerAnnotationRenderForViewportIds, triggerAnnotationRender, pointInShapeCallback, pointInSurroundingSphereCallback, getAnnotationNearPoint, getAnnotationNearPointOnEnabledElement, jumpToSlice, viewport, cine, clip, boundingBox, rectangleROITool, planarFreehandROITool, stackPrefetch, stackContextPrefetch, scroll, roundNumber, pointToString, polyDataUtils, };
 //# sourceMappingURL=index.js.map

package/dist/esm/utilities/index.js.map

@@ -1 +1 @@
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package/dist/esm/utilities/math/point/distanceToPoint.d.ts

@@ -1,2 +1,4 @@
 import type { Types } from '@cornerstonejs/core';
-export default function distanceToPoint(p1: Types.Point2, p2: Types.Point2): number;
+declare type Point = Types.Point2 | Types.Point3;
+export default function distanceToPoint(p1: Point, p2: Point): number;
+export {};

package/dist/esm/utilities/math/point/distanceToPoint.js

@@ -1,9 +1,9 @@
 export default function distanceToPoint(p1, p2) {
-    if (p1?.length !== 2 || p2?.length !== 2) {
-        throw Error('points should have 2 elements of [x, y]');
+    if (p1.length !== p2.length) {
+        throw Error('Both points should have the same dimensionality');
     }
-    const [x1, y1] = p1;
-    const [x2, y2] = p2;
-    return Math.sqrt(Math.pow(x1 - x2, 2) + Math.pow(y1 - y2, 2));
+    const [x1, y1, z1 = 0] = p1;
+    const [x2, y2, z2 = 0] = p2;
+    return Math.sqrt(Math.pow(x1 - x2, 2) + Math.pow(y1 - y2, 2) + Math.pow(z1 - z2, 2));
 }
 //# sourceMappingURL=distanceToPoint.js.map

package/dist/esm/utilities/math/point/distanceToPoint.js.map

@@ -1 +1 @@
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package/dist/esm/utilities/pointToString.d.ts

@@ -0,0 +1 @@
+export declare function pointToString(point: any, decimals?: number): string;

package/dist/esm/utilities/pointToString.js

@@ -0,0 +1,9 @@
+export function pointToString(point, decimals = 5) {
+    return (parseFloat(point[0]).toFixed(decimals) +
+        ',' +
+        parseFloat(point[1]).toFixed(decimals) +
+        ',' +
+        parseFloat(point[2]).toFixed(decimals) +
+        ',');
+}
+//# sourceMappingURL=pointToString.js.map

package/dist/esm/utilities/pointToString.js.map

@@ -0,0 +1 @@
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package/dist/esm/utilities/polyData/utils.d.ts

@@ -0,0 +1,4 @@
+import vtkPolyData from '@kitware/vtk.js/Common/DataModel/PolyData';
+export declare function getPoint(points: any, idx: any): any[];
+export declare function getPolyDataPointIndexes(polyData: vtkPolyData): any[];
+export declare function getPolyDataPoints(polyData: vtkPolyData): any[];

package/dist/esm/utilities/polyData/utils.js

@@ -0,0 +1,52 @@
+export function getPoint(points, idx) {
+    if (idx < points.length / 3) {
+        return [points[idx * 3], points[idx * 3 + 1], points[idx * 3 + 2]];
+    }
+}
+export function getPolyDataPointIndexes(polyData) {
+    const linesData = polyData.getLines().getData();
+    let idx = 0;
+    const lineSegments = new Map();
+    while (idx < linesData.length) {
+        const segmentSize = linesData[idx++];
+        const segment = [];
+        for (let i = 0; i < segmentSize; i++) {
+            segment.push(linesData[idx + i]);
+        }
+        lineSegments.set(segment[0], segment);
+        idx += segmentSize;
+    }
+    const contours = [];
+    const findStartingPoint = (map) => {
+        for (const [key, value] of map.entries()) {
+            if (value !== undefined) {
+                return key;
+            }
+        }
+        return -1;
+    };
+    let startPoint = findStartingPoint(lineSegments);
+    while (startPoint !== -1) {
+        const contour = [startPoint];
+        while (lineSegments.has(startPoint)) {
+            const nextPoint = lineSegments.get(startPoint)[1];
+            if (lineSegments.has(nextPoint)) {
+                contour.push(nextPoint);
+            }
+            lineSegments.delete(startPoint);
+            startPoint = nextPoint;
+        }
+        contours.push(contour);
+        startPoint = findStartingPoint(lineSegments);
+    }
+    return contours.length ? contours : undefined;
+}
+export function getPolyDataPoints(polyData) {
+    const contoursIndexes = getPolyDataPointIndexes(polyData);
+    if (!contoursIndexes) {
+        return;
+    }
+    const rawPointsData = polyData.getPoints().getData();
+    return contoursIndexes.map((contourIndexes) => contourIndexes.map((index) => getPoint(rawPointsData, index)));
+}
+//# sourceMappingURL=utils.js.map

package/dist/esm/utilities/polyData/utils.js.map

@@ -0,0 +1 @@
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package/dist/esm/utilities/segmentation/utilities.js

@@ -25,7 +25,7 @@ export function getVoxelOverlap(imageData, dimensions, voxelSpacing, voxelCenter
     for (let i = 0; i < 2; i++) {
         for (let j = 0; j < 2; j++) {
             for (let k = 0; k < 2; k++) {
-                const point = voxelCenter;
+                const point = [...voxelCenter];
                 point[0] = point[0] + ((i * 2 - 1) * voxelSpacing[0]) / 2;
                 point[1] = point[1] + ((j * 2 - 1) * voxelSpacing[1]) / 2;
                 point[2] = point[2] + ((k * 2 - 1) * voxelSpacing[2]) / 2;
@@ -38,7 +38,7 @@ export function getVoxelOverlap(imageData, dimensions, voxelSpacing, voxelCenter
     return overlapBounds;
 }
 export function processVolumes(segmentationVolume, thresholdVolumeInformation) {
-    const { spacing: segmentationSpacing, imageData: segmentationImageData } = segmentationVolume;
+    const { spacing: segmentationSpacing } = segmentationVolume;
     const scalarData = segmentationVolume.getScalarData();
     const volumeInfoList = [];
     let baseVolumeIdx = 0;

package/dist/esm/utilities/segmentation/utilities.js.map

@@ -1 +1 @@
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