@cornerstonejs/tools 0.17.3 → 0.18.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (153) hide show
  1. package/dist/cjs/enums/Events.d.ts +1 -0
  2. package/dist/cjs/enums/Events.js +1 -0
  3. package/dist/cjs/enums/Events.js.map +1 -1
  4. package/dist/cjs/eventListeners/segmentation/segmentationRepresentationRemovedEventListener.js.map +1 -1
  5. package/dist/cjs/stateManagement/segmentation/SegmentationStateManager.d.ts +1 -0
  6. package/dist/cjs/stateManagement/segmentation/SegmentationStateManager.js +3 -0
  7. package/dist/cjs/stateManagement/segmentation/SegmentationStateManager.js.map +1 -1
  8. package/dist/cjs/stateManagement/segmentation/helpers/normalizeSegmentationInput.js +1 -1
  9. package/dist/cjs/stateManagement/segmentation/helpers/normalizeSegmentationInput.js.map +1 -1
  10. package/dist/cjs/stateManagement/segmentation/segmentationState.d.ts +2 -1
  11. package/dist/cjs/stateManagement/segmentation/segmentationState.js +7 -1
  12. package/dist/cjs/stateManagement/segmentation/segmentationState.js.map +1 -1
  13. package/dist/cjs/stateManagement/segmentation/triggerSegmentationEvents.d.ts +2 -1
  14. package/dist/cjs/stateManagement/segmentation/triggerSegmentationEvents.js +8 -1
  15. package/dist/cjs/stateManagement/segmentation/triggerSegmentationEvents.js.map +1 -1
  16. package/dist/cjs/store/ToolGroupManager/ToolGroup.d.ts +2 -0
  17. package/dist/cjs/store/ToolGroupManager/ToolGroup.js +9 -2
  18. package/dist/cjs/store/ToolGroupManager/ToolGroup.js.map +1 -1
  19. package/dist/cjs/synchronizers/callbacks/voiSyncCallback.js +16 -6
  20. package/dist/cjs/synchronizers/callbacks/voiSyncCallback.js.map +1 -1
  21. package/dist/cjs/tools/CrosshairsTool.js +6 -5
  22. package/dist/cjs/tools/CrosshairsTool.js.map +1 -1
  23. package/dist/cjs/tools/annotation/PlanarFreehandROITool.js +4 -0
  24. package/dist/cjs/tools/annotation/PlanarFreehandROITool.js.map +1 -1
  25. package/dist/cjs/tools/annotation/planarFreehandROITool/renderMethods.js +20 -1
  26. package/dist/cjs/tools/annotation/planarFreehandROITool/renderMethods.js.map +1 -1
  27. package/dist/cjs/tools/displayTools/Labelmap/addLabelmapToElement.js +5 -2
  28. package/dist/cjs/tools/displayTools/Labelmap/addLabelmapToElement.js.map +1 -1
  29. package/dist/cjs/tools/segmentation/strategies/eraseRectangle.js +2 -2
  30. package/dist/cjs/tools/segmentation/strategies/eraseRectangle.js.map +1 -1
  31. package/dist/cjs/tools/segmentation/strategies/fillCircle.js +2 -2
  32. package/dist/cjs/tools/segmentation/strategies/fillCircle.js.map +1 -1
  33. package/dist/cjs/tools/segmentation/strategies/fillRectangle.js +2 -2
  34. package/dist/cjs/tools/segmentation/strategies/fillRectangle.js.map +1 -1
  35. package/dist/cjs/tools/segmentation/strategies/fillSphere.js +1 -1
  36. package/dist/cjs/tools/segmentation/strategies/fillSphere.js.map +1 -1
  37. package/dist/cjs/types/BoundsIJK.d.ts +3 -0
  38. package/dist/cjs/types/BoundsIJK.js +3 -0
  39. package/dist/cjs/types/BoundsIJK.js.map +1 -0
  40. package/dist/cjs/types/EventTypes.d.ts +5 -1
  41. package/dist/cjs/types/index.d.ts +2 -1
  42. package/dist/cjs/utilities/{segmentation/getBoundingBoxUtils.d.ts → boundingBox/extend2DBoundingBoxInViewAxis.d.ts} +1 -2
  43. package/dist/cjs/utilities/boundingBox/extend2DBoundingBoxInViewAxis.js +13 -0
  44. package/dist/cjs/utilities/boundingBox/extend2DBoundingBoxInViewAxis.js.map +1 -0
  45. package/dist/cjs/utilities/boundingBox/getBoundingBoxAroundShape.d.ts +3 -0
  46. package/dist/cjs/utilities/boundingBox/getBoundingBoxAroundShape.js +40 -0
  47. package/dist/cjs/utilities/boundingBox/getBoundingBoxAroundShape.js.map +1 -0
  48. package/dist/cjs/utilities/boundingBox/index.d.ts +3 -0
  49. package/dist/cjs/utilities/boundingBox/index.js +11 -0
  50. package/dist/cjs/utilities/boundingBox/index.js.map +1 -0
  51. package/dist/cjs/utilities/index.d.ts +3 -1
  52. package/dist/cjs/utilities/index.js +5 -1
  53. package/dist/cjs/utilities/index.js.map +1 -1
  54. package/dist/cjs/utilities/pointInShapeCallback.d.ts +1 -2
  55. package/dist/cjs/utilities/pointInShapeCallback.js.map +1 -1
  56. package/dist/cjs/utilities/pointInSurroundingSphereCallback.d.ts +1 -1
  57. package/dist/cjs/utilities/pointInSurroundingSphereCallback.js +42 -12
  58. package/dist/cjs/utilities/pointInSurroundingSphereCallback.js.map +1 -1
  59. package/dist/cjs/utilities/rectangleROITool/getBoundsIJKFromRectangleAnnotations.d.ts +5 -0
  60. package/dist/cjs/utilities/rectangleROITool/getBoundsIJKFromRectangleAnnotations.js +51 -0
  61. package/dist/cjs/utilities/rectangleROITool/getBoundsIJKFromRectangleAnnotations.js.map +1 -0
  62. package/dist/cjs/utilities/rectangleROITool/index.d.ts +2 -0
  63. package/dist/cjs/utilities/rectangleROITool/index.js +9 -0
  64. package/dist/cjs/utilities/rectangleROITool/index.js.map +1 -0
  65. package/dist/cjs/utilities/segmentation/index.d.ts +2 -2
  66. package/dist/cjs/utilities/segmentation/index.js +3 -4
  67. package/dist/cjs/utilities/segmentation/index.js.map +1 -1
  68. package/dist/cjs/utilities/segmentation/rectangleROIThresholdVolumeByRange.d.ts +19 -0
  69. package/dist/cjs/utilities/segmentation/rectangleROIThresholdVolumeByRange.js +42 -0
  70. package/dist/cjs/utilities/segmentation/rectangleROIThresholdVolumeByRange.js.map +1 -0
  71. package/dist/cjs/utilities/segmentation/thresholdVolumeByRange.d.ts +5 -19
  72. package/dist/cjs/utilities/segmentation/thresholdVolumeByRange.js +13 -69
  73. package/dist/cjs/utilities/segmentation/thresholdVolumeByRange.js.map +1 -1
  74. package/dist/esm/enums/Events.d.ts +1 -0
  75. package/dist/esm/enums/Events.js +1 -0
  76. package/dist/esm/enums/Events.js.map +1 -1
  77. package/dist/esm/eventListeners/segmentation/segmentationRepresentationRemovedEventListener.js.map +1 -1
  78. package/dist/esm/stateManagement/segmentation/SegmentationStateManager.d.ts +1 -0
  79. package/dist/esm/stateManagement/segmentation/SegmentationStateManager.js +3 -0
  80. package/dist/esm/stateManagement/segmentation/SegmentationStateManager.js.map +1 -1
  81. package/dist/esm/stateManagement/segmentation/helpers/normalizeSegmentationInput.js +1 -1
  82. package/dist/esm/stateManagement/segmentation/helpers/normalizeSegmentationInput.js.map +1 -1
  83. package/dist/esm/stateManagement/segmentation/segmentationState.d.ts +2 -1
  84. package/dist/esm/stateManagement/segmentation/segmentationState.js +7 -2
  85. package/dist/esm/stateManagement/segmentation/segmentationState.js.map +1 -1
  86. package/dist/esm/stateManagement/segmentation/triggerSegmentationEvents.d.ts +2 -1
  87. package/dist/esm/stateManagement/segmentation/triggerSegmentationEvents.js +7 -1
  88. package/dist/esm/stateManagement/segmentation/triggerSegmentationEvents.js.map +1 -1
  89. package/dist/esm/store/ToolGroupManager/ToolGroup.d.ts +2 -0
  90. package/dist/esm/store/ToolGroupManager/ToolGroup.js +9 -2
  91. package/dist/esm/store/ToolGroupManager/ToolGroup.js.map +1 -1
  92. package/dist/esm/synchronizers/callbacks/voiSyncCallback.js +17 -7
  93. package/dist/esm/synchronizers/callbacks/voiSyncCallback.js.map +1 -1
  94. package/dist/esm/tools/CrosshairsTool.js +6 -5
  95. package/dist/esm/tools/CrosshairsTool.js.map +1 -1
  96. package/dist/esm/tools/annotation/PlanarFreehandROITool.js +4 -0
  97. package/dist/esm/tools/annotation/PlanarFreehandROITool.js.map +1 -1
  98. package/dist/esm/tools/annotation/planarFreehandROITool/renderMethods.js +19 -1
  99. package/dist/esm/tools/annotation/planarFreehandROITool/renderMethods.js.map +1 -1
  100. package/dist/esm/tools/displayTools/Labelmap/addLabelmapToElement.js +5 -2
  101. package/dist/esm/tools/displayTools/Labelmap/addLabelmapToElement.js.map +1 -1
  102. package/dist/esm/tools/segmentation/strategies/eraseRectangle.js +1 -1
  103. package/dist/esm/tools/segmentation/strategies/eraseRectangle.js.map +1 -1
  104. package/dist/esm/tools/segmentation/strategies/fillCircle.js +1 -1
  105. package/dist/esm/tools/segmentation/strategies/fillCircle.js.map +1 -1
  106. package/dist/esm/tools/segmentation/strategies/fillRectangle.js +1 -1
  107. package/dist/esm/tools/segmentation/strategies/fillRectangle.js.map +1 -1
  108. package/dist/esm/tools/segmentation/strategies/fillSphere.js +1 -1
  109. package/dist/esm/tools/segmentation/strategies/fillSphere.js.map +1 -1
  110. package/dist/esm/types/BoundsIJK.d.ts +3 -0
  111. package/dist/esm/types/BoundsIJK.js +2 -0
  112. package/dist/esm/types/BoundsIJK.js.map +1 -0
  113. package/dist/esm/types/EventTypes.d.ts +5 -1
  114. package/dist/esm/types/index.d.ts +2 -1
  115. package/dist/esm/utilities/{segmentation/getBoundingBoxUtils.d.ts → boundingBox/extend2DBoundingBoxInViewAxis.d.ts} +1 -2
  116. package/dist/esm/utilities/boundingBox/extend2DBoundingBoxInViewAxis.js +11 -0
  117. package/dist/esm/utilities/boundingBox/extend2DBoundingBoxInViewAxis.js.map +1 -0
  118. package/dist/esm/utilities/boundingBox/getBoundingBoxAroundShape.d.ts +3 -0
  119. package/dist/esm/utilities/boundingBox/getBoundingBoxAroundShape.js +38 -0
  120. package/dist/esm/utilities/boundingBox/getBoundingBoxAroundShape.js.map +1 -0
  121. package/dist/esm/utilities/boundingBox/index.d.ts +3 -0
  122. package/dist/esm/utilities/boundingBox/index.js +4 -0
  123. package/dist/esm/utilities/boundingBox/index.js.map +1 -0
  124. package/dist/esm/utilities/index.d.ts +3 -1
  125. package/dist/esm/utilities/index.js +3 -1
  126. package/dist/esm/utilities/index.js.map +1 -1
  127. package/dist/esm/utilities/pointInShapeCallback.d.ts +1 -2
  128. package/dist/esm/utilities/pointInShapeCallback.js.map +1 -1
  129. package/dist/esm/utilities/pointInSurroundingSphereCallback.d.ts +1 -1
  130. package/dist/esm/utilities/pointInSurroundingSphereCallback.js +40 -10
  131. package/dist/esm/utilities/pointInSurroundingSphereCallback.js.map +1 -1
  132. package/dist/esm/utilities/rectangleROITool/getBoundsIJKFromRectangleAnnotations.d.ts +5 -0
  133. package/dist/esm/utilities/rectangleROITool/getBoundsIJKFromRectangleAnnotations.js +45 -0
  134. package/dist/esm/utilities/rectangleROITool/getBoundsIJKFromRectangleAnnotations.js.map +1 -0
  135. package/dist/esm/utilities/rectangleROITool/index.d.ts +2 -0
  136. package/dist/esm/utilities/rectangleROITool/index.js +3 -0
  137. package/dist/esm/utilities/rectangleROITool/index.js.map +1 -0
  138. package/dist/esm/utilities/segmentation/index.d.ts +2 -2
  139. package/dist/esm/utilities/segmentation/index.js +2 -2
  140. package/dist/esm/utilities/segmentation/index.js.map +1 -1
  141. package/dist/esm/utilities/segmentation/rectangleROIThresholdVolumeByRange.d.ts +19 -0
  142. package/dist/esm/utilities/segmentation/rectangleROIThresholdVolumeByRange.js +37 -0
  143. package/dist/esm/utilities/segmentation/rectangleROIThresholdVolumeByRange.js.map +1 -0
  144. package/dist/esm/utilities/segmentation/thresholdVolumeByRange.d.ts +5 -19
  145. package/dist/esm/utilities/segmentation/thresholdVolumeByRange.js +13 -47
  146. package/dist/esm/utilities/segmentation/thresholdVolumeByRange.js.map +1 -1
  147. package/dist/umd/index.js +1 -1
  148. package/dist/umd/index.js.map +1 -1
  149. package/package.json +4 -4
  150. package/dist/cjs/utilities/segmentation/getBoundingBoxUtils.js +0 -51
  151. package/dist/cjs/utilities/segmentation/getBoundingBoxUtils.js.map +0 -1
  152. package/dist/esm/utilities/segmentation/getBoundingBoxUtils.js +0 -47
  153. package/dist/esm/utilities/segmentation/getBoundingBoxUtils.js.map +0 -1
@@ -0,0 +1,38 @@
1
+ function getBoundingBoxAroundShape(points, dimensions) {
2
+ let xMin = Infinity;
3
+ let xMax = 0;
4
+ let yMin = Infinity;
5
+ let yMax = 0;
6
+ let zMin = Infinity;
7
+ let zMax = 0;
8
+ points.forEach((p) => {
9
+ xMin = Math.min(p[0], xMin);
10
+ xMax = Math.max(p[0], xMax);
11
+ yMin = Math.min(p[1], yMin);
12
+ yMax = Math.max(p[1], yMax);
13
+ zMin = Math.min(p[2], zMin);
14
+ zMax = Math.max(p[2], zMax);
15
+ });
16
+ xMin = Math.floor(xMin);
17
+ xMax = Math.floor(xMax);
18
+ yMin = Math.floor(yMin);
19
+ yMax = Math.floor(yMax);
20
+ zMin = Math.floor(zMin);
21
+ zMax = Math.floor(zMax);
22
+ if (dimensions) {
23
+ const [width, height, depth] = dimensions;
24
+ xMin = Math.max(0, xMin);
25
+ xMax = Math.min(width - 1, xMax);
26
+ yMin = Math.max(0, yMin);
27
+ yMax = Math.min(height - 1, yMax);
28
+ zMin = Math.max(0, zMin);
29
+ zMax = Math.min(depth - 1, zMax);
30
+ }
31
+ return [
32
+ [xMin, xMax],
33
+ [yMin, yMax],
34
+ [zMin, zMax],
35
+ ];
36
+ }
37
+ export default getBoundingBoxAroundShape;
38
+ //# sourceMappingURL=getBoundingBoxAroundShape.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"getBoundingBoxAroundShape.js","sourceRoot":"","sources":["../../../../src/utilities/boundingBox/getBoundingBoxAroundShape.ts"],"names":[],"mappings":"AAWA,SAAS,yBAAyB,CAChC,MAAsB,EACtB,UAAyB;IAEzB,IAAI,IAAI,GAAG,QAAQ,CAAC;IACpB,IAAI,IAAI,GAAG,CAAC,CAAC;IACb,IAAI,IAAI,GAAG,QAAQ,CAAC;IACpB,IAAI,IAAI,GAAG,CAAC,CAAC;IACb,IAAI,IAAI,GAAG,QAAQ,CAAC;IACpB,IAAI,IAAI,GAAG,CAAC,CAAC;IAEb,MAAM,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,EAAE;QACnB,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;QAC5B,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;QAC5B,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;QAC5B,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;QAC5B,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;QAC5B,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;IAC9B,CAAC,CAAC,CAAC;IAEH,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;IACxB,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;IACxB,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;IACxB,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;IACxB,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;IACxB,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;IAExB,IAAI,UAAU,EAAE;QAEd,MAAM,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,GAAG,UAAU,CAAC;QAC1C,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;QACzB,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC;QACjC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;QACzB,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,MAAM,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC;QAClC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;QACzB,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC;KAClC;IAED,OAAO;QACL,CAAC,IAAI,EAAE,IAAI,CAAC;QACZ,CAAC,IAAI,EAAE,IAAI,CAAC;QACZ,CAAC,IAAI,EAAE,IAAI,CAAC;KACb,CAAC;AACJ,CAAC;AAED,eAAe,yBAAyB,CAAC"}
@@ -0,0 +1,3 @@
1
+ import extend2DBoundingBoxInViewAxis from './extend2DBoundingBoxInViewAxis';
2
+ import getBoundingBoxAroundShape from './getBoundingBoxAroundShape';
3
+ export { extend2DBoundingBoxInViewAxis, getBoundingBoxAroundShape };
@@ -0,0 +1,4 @@
1
+ import extend2DBoundingBoxInViewAxis from './extend2DBoundingBoxInViewAxis';
2
+ import getBoundingBoxAroundShape from './getBoundingBoxAroundShape';
3
+ export { extend2DBoundingBoxInViewAxis, getBoundingBoxAroundShape };
4
+ //# sourceMappingURL=index.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/utilities/boundingBox/index.ts"],"names":[],"mappings":"AAAA,OAAO,6BAA6B,MAAM,iCAAiC,CAAC;AAC5E,OAAO,yBAAyB,MAAM,6BAA6B,CAAC;AAEpE,OAAO,EAAE,6BAA6B,EAAE,yBAAyB,EAAE,CAAC"}
@@ -17,5 +17,7 @@ import * as stackScrollTool from './stackScrollTool';
17
17
  import * as viewportFilters from './viewportFilters';
18
18
  import * as orientation from './orientation';
19
19
  import * as cine from './cine';
20
+ import * as boundingBox from './boundingBox';
21
+ import * as rectangleROITool from './rectangleROITool';
20
22
  import { triggerEvent } from '@cornerstonejs/core';
21
- export { math, planar, viewportFilters, stackScrollTool, drawing, debounce, deepMerge, throttle, orientation, isObject, triggerEvent, calibrateImageSpacing, segmentation, triggerAnnotationRenderForViewportIds, pointInShapeCallback, pointInSurroundingSphereCallback, getAnnotationNearPoint, getAnnotationNearPointOnEnabledElement, jumpToSlice, cine, clip, };
23
+ export { math, planar, viewportFilters, stackScrollTool, drawing, debounce, deepMerge, throttle, orientation, isObject, triggerEvent, calibrateImageSpacing, segmentation, triggerAnnotationRenderForViewportIds, pointInShapeCallback, pointInSurroundingSphereCallback, getAnnotationNearPoint, getAnnotationNearPointOnEnabledElement, jumpToSlice, cine, clip, boundingBox, rectangleROITool, };
@@ -17,6 +17,8 @@ import * as stackScrollTool from './stackScrollTool';
17
17
  import * as viewportFilters from './viewportFilters';
18
18
  import * as orientation from './orientation';
19
19
  import * as cine from './cine';
20
+ import * as boundingBox from './boundingBox';
21
+ import * as rectangleROITool from './rectangleROITool';
20
22
  import { triggerEvent } from '@cornerstonejs/core';
21
- export { math, planar, viewportFilters, stackScrollTool, drawing, debounce, deepMerge, throttle, orientation, isObject, triggerEvent, calibrateImageSpacing, segmentation, triggerAnnotationRenderForViewportIds, pointInShapeCallback, pointInSurroundingSphereCallback, getAnnotationNearPoint, getAnnotationNearPointOnEnabledElement, jumpToSlice, cine, clip, };
23
+ export { math, planar, viewportFilters, stackScrollTool, drawing, debounce, deepMerge, throttle, orientation, isObject, triggerEvent, calibrateImageSpacing, segmentation, triggerAnnotationRenderForViewportIds, pointInShapeCallback, pointInSurroundingSphereCallback, getAnnotationNearPoint, getAnnotationNearPointOnEnabledElement, jumpToSlice, cine, clip, boundingBox, rectangleROITool, };
22
24
  //# sourceMappingURL=index.js.map
@@ -1 +1 @@
1
- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/utilities/index.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,sBAAsB,EACtB,sCAAsC,GACvC,MAAM,0BAA0B,CAAC;AAGlC,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,SAAS,MAAM,aAAa,CAAC;AACpC,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,IAAI,MAAM,QAAQ,CAAC;AAC1B,OAAO,qBAAqB,MAAM,yBAAyB,CAAC;AAC5D,OAAO,qCAAqC,MAAM,yCAAyC,CAAC;AAC5F,OAAO,WAAW,MAAM,wBAAwB,CAAC;AAEjD,OAAO,oBAAoB,MAAM,wBAAwB,CAAC;AAC1D,OAAO,gCAAgC,MAAM,oCAAoC,CAAC;AAGlF,OAAO,KAAK,YAAY,MAAM,gBAAgB,CAAC;AAC/C,OAAO,KAAK,OAAO,MAAM,WAAW,CAAC;AACrC,OAAO,KAAK,IAAI,MAAM,QAAQ,CAAC;AAC/B,OAAO,KAAK,MAAM,MAAM,UAAU,CAAC;AACnC,OAAO,KAAK,eAAe,MAAM,mBAAmB,CAAC;AACrD,OAAO,KAAK,eAAe,MAAM,mBAAmB,CAAC;AACrD,OAAO,KAAK,WAAW,MAAM,eAAe,CAAC;AAC7C,OAAO,KAAK,IAAI,MAAM,QAAQ,CAAC;AAG/B,OAAO,EAAE,YAAY,EAAE,MAAM,qBAAqB,CAAC;AAEnD,OAAO,EACL,IAAI,EACJ,MAAM,EACN,eAAe,EACf,eAAe,EACf,OAAO,EACP,QAAQ,EACR,SAAS,EACT,QAAQ,EACR,WAAW,EACX,QAAQ,EACR,YAAY,EACZ,qBAAqB,EACrB,YAAY,EACZ,qCAAqC,EACrC,oBAAoB,EACpB,gCAAgC,EAChC,sBAAsB,EACtB,sCAAsC,EACtC,WAAW,EACX,IAAI,EACJ,IAAI,GACL,CAAC"}
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/utilities/index.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,sBAAsB,EACtB,sCAAsC,GACvC,MAAM,0BAA0B,CAAC;AAGlC,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,SAAS,MAAM,aAAa,CAAC;AACpC,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,IAAI,MAAM,QAAQ,CAAC;AAC1B,OAAO,qBAAqB,MAAM,yBAAyB,CAAC;AAC5D,OAAO,qCAAqC,MAAM,yCAAyC,CAAC;AAC5F,OAAO,WAAW,MAAM,wBAAwB,CAAC;AAEjD,OAAO,oBAAoB,MAAM,wBAAwB,CAAC;AAC1D,OAAO,gCAAgC,MAAM,oCAAoC,CAAC;AAGlF,OAAO,KAAK,YAAY,MAAM,gBAAgB,CAAC;AAC/C,OAAO,KAAK,OAAO,MAAM,WAAW,CAAC;AACrC,OAAO,KAAK,IAAI,MAAM,QAAQ,CAAC;AAC/B,OAAO,KAAK,MAAM,MAAM,UAAU,CAAC;AACnC,OAAO,KAAK,eAAe,MAAM,mBAAmB,CAAC;AACrD,OAAO,KAAK,eAAe,MAAM,mBAAmB,CAAC;AACrD,OAAO,KAAK,WAAW,MAAM,eAAe,CAAC;AAC7C,OAAO,KAAK,IAAI,MAAM,QAAQ,CAAC;AAC/B,OAAO,KAAK,WAAW,MAAM,eAAe,CAAC;AAC7C,OAAO,KAAK,gBAAgB,MAAM,oBAAoB,CAAC;AAGvD,OAAO,EAAE,YAAY,EAAE,MAAM,qBAAqB,CAAC;AAEnD,OAAO,EACL,IAAI,EACJ,MAAM,EACN,eAAe,EACf,eAAe,EACf,OAAO,EACP,QAAQ,EACR,SAAS,EACT,QAAQ,EACR,WAAW,EACX,QAAQ,EACR,YAAY,EACZ,qBAAqB,EACrB,YAAY,EACZ,qCAAqC,EACrC,oBAAoB,EACpB,gCAAgC,EAChC,sBAAsB,EACtB,sCAAsC,EACtC,WAAW,EACX,IAAI,EACJ,IAAI,EACJ,WAAW,EACX,gBAAgB,GACjB,CAAC"}
@@ -1,5 +1,6 @@
1
1
  import type { Types } from '@cornerstonejs/core';
2
2
  import type { vtkImageData } from '@kitware/vtk.js/Common/DataModel/ImageData';
3
+ import BoundsIJK from '../types/BoundsIJK';
3
4
  export declare type PointInShapeCallback = ({ value, index, pointIJK, pointLPS, }: {
4
5
  value: number;
5
6
  index: number;
@@ -7,6 +8,4 @@ export declare type PointInShapeCallback = ({ value, index, pointIJK, pointLPS,
7
8
  pointLPS: Types.Point3;
8
9
  }) => void;
9
10
  export declare type ShapeFnCriteria = (pointIJK: Types.Point3, pointLPS: Types.Point3) => boolean;
10
- declare type BoundsIJK = [Types.Point2, Types.Point2, Types.Point2];
11
11
  export default function pointInShapeCallback(imageData: vtkImageData | Types.CPUImageData, pointInShapeFn: ShapeFnCriteria, callback: PointInShapeCallback, boundsIJK?: BoundsIJK): void;
12
- export {};
@@ -1 +1 @@
1
- {"version":3,"file":"pointInShapeCallback.js","sourceRoot":"","sources":["../../../src/utilities/pointInShapeCallback.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AAqCjC,MAAM,CAAC,OAAO,UAAU,oBAAoB,CAC1C,SAA4C,EAC5C,cAA+B,EAC/B,QAA8B,EAC9B,SAAqB;IAErB,IAAI,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,CAAC;IAEvC,IAAI,UAAU,CAAC;IAGf,IAAK,SAAgC,CAAC,aAAa,EAAE;QACnD,UAAU,GAAI,SAAgC,CAAC,aAAa,EAAE,CAAC;KAChE;SAAM;QACL,UAAU,GAAI,SAA0B;aACrC,YAAY,EAAE;aACd,UAAU,EAAE;aACZ,OAAO,EAAE,CAAC;KACd;IAED,MAAM,UAAU,GAAG,SAAS,CAAC,aAAa,EAAE,CAAC;IAE7C,IAAI,CAAC,SAAS,EAAE;QACd,IAAI,GAAG,CAAC,CAAC;QACT,IAAI,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;QACrB,IAAI,GAAG,CAAC,CAAC;QACT,IAAI,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;QACrB,IAAI,GAAG,CAAC,CAAC;QACT,IAAI,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;KACtB;SAAM;QACL,CAAC,CAAC,IAAI,EAAE,IAAI,CAAC,EAAE,CAAC,IAAI,EAAE,IAAI,CAAC,EAAE,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,GAAG,SAAS,CAAC;KACxD;IAED,MAAM,KAAK,GAAG,IAAI,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,CAAC,CAAC;IAEhD,MAAM,SAAS,GAAG,SAAS,CAAC,YAAY,EAAE,CAAC;IAC3C,MAAM,UAAU,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IACzC,MAAM,aAAa,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IAC5C,MAAM,cAAc,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IAE7C,MAAM,OAAO,GAAG,SAAS,CAAC,UAAU,EAAE,CAAC;IACvC,MAAM,CAAC,UAAU,EAAE,aAAa,EAAE,eAAe,CAAC,GAAG,OAAO,CAAC;IAG7D,MAAM,aAAa,GAAG,SAAS,CAAC,YAAY,CAAC,KAAK,CAAC,CAAC;IAEpD,MAAM,OAAO,GAAG,IAAI,CAAC,UAAU,CAC7B,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,EAC1B,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,EAC1B,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,CAC3B,CAAC;IAEF,MAAM,UAAU,GAAG,IAAI,CAAC,UAAU,CAChC,aAAa,CAAC,CAAC,CAAC,GAAG,aAAa,EAChC,aAAa,CAAC,CAAC,CAAC,GAAG,aAAa,EAChC,aAAa,CAAC,CAAC,CAAC,GAAG,aAAa,CACjC,CAAC;IAEF,MAAM,YAAY,GAAG,IAAI,CAAC,UAAU,CAClC,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,EACnC,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,EACnC,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,CACpC,CAAC;IAEF,MAAM,SAAS,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;IAChC,MAAM,SAAS,GAAG,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;IAEhD,KAAK,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,IAAI,IAAI,EAAE,CAAC,EAAE,EAAE;QACjC,KAAK,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,IAAI,IAAI,EAAE,CAAC,EAAE,EAAE;YACjC,KAAK,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,IAAI,IAAI,EAAE,CAAC,EAAE,EAAE;gBACjC,MAAM,QAAQ,GAAiB,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;gBACzC,MAAM,EAAE,GAAG,CAAC,GAAG,IAAI,CAAC;gBACpB,MAAM,EAAE,GAAG,CAAC,GAAG,IAAI,CAAC;gBACpB,MAAM,EAAE,GAAG,CAAC,GAAG,IAAI,CAAC;gBAEpB,MAAM,UAAU,GAAG,aAAa,CAAC;gBAEjC,MAAM,QAAQ,GAAiB;oBAC7B,UAAU,CAAC,CAAC,CAAC;wBACX,EAAE,GAAG,OAAO,CAAC,CAAC,CAAC;wBACf,EAAE,GAAG,UAAU,CAAC,CAAC,CAAC;wBAClB,EAAE,GAAG,YAAY,CAAC,CAAC,CAAC;oBACtB,UAAU,CAAC,CAAC,CAAC;wBACX,EAAE,GAAG,OAAO,CAAC,CAAC,CAAC;wBACf,EAAE,GAAG,UAAU,CAAC,CAAC,CAAC;wBAClB,EAAE,GAAG,YAAY,CAAC,CAAC,CAAC;oBACtB,UAAU,CAAC,CAAC,CAAC;wBACX,EAAE,GAAG,OAAO,CAAC,CAAC,CAAC;wBACf,EAAE,GAAG,UAAU,CAAC,CAAC,CAAC;wBAClB,EAAE,GAAG,YAAY,CAAC,CAAC,CAAC;iBACvB,CAAC;gBAEF,IAAI,cAAc,CAAC,QAAQ,EAAE,QAAQ,CAAC,EAAE;oBACtC,MAAM,KAAK,GAAG,CAAC,GAAG,SAAS,GAAG,CAAC,GAAG,SAAS,GAAG,CAAC,CAAC;oBAChD,MAAM,KAAK,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC;oBAEhC,QAAQ,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,QAAQ,EAAE,CAAC,CAAC;iBAChD;aACF;SACF;KACF;AACH,CAAC"}
1
+ {"version":3,"file":"pointInShapeCallback.js","sourceRoot":"","sources":["../../../src/utilities/pointInShapeCallback.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AAoCjC,MAAM,CAAC,OAAO,UAAU,oBAAoB,CAC1C,SAA4C,EAC5C,cAA+B,EAC/B,QAA8B,EAC9B,SAAqB;IAErB,IAAI,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,CAAC;IAEvC,IAAI,UAAU,CAAC;IAGf,IAAK,SAAgC,CAAC,aAAa,EAAE;QACnD,UAAU,GAAI,SAAgC,CAAC,aAAa,EAAE,CAAC;KAChE;SAAM;QACL,UAAU,GAAI,SAA0B;aACrC,YAAY,EAAE;aACd,UAAU,EAAE;aACZ,OAAO,EAAE,CAAC;KACd;IAED,MAAM,UAAU,GAAG,SAAS,CAAC,aAAa,EAAE,CAAC;IAE7C,IAAI,CAAC,SAAS,EAAE;QACd,IAAI,GAAG,CAAC,CAAC;QACT,IAAI,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;QACrB,IAAI,GAAG,CAAC,CAAC;QACT,IAAI,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;QACrB,IAAI,GAAG,CAAC,CAAC;QACT,IAAI,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;KACtB;SAAM;QACL,CAAC,CAAC,IAAI,EAAE,IAAI,CAAC,EAAE,CAAC,IAAI,EAAE,IAAI,CAAC,EAAE,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,GAAG,SAAS,CAAC;KACxD;IAED,MAAM,KAAK,GAAG,IAAI,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,CAAC,CAAC;IAEhD,MAAM,SAAS,GAAG,SAAS,CAAC,YAAY,EAAE,CAAC;IAC3C,MAAM,UAAU,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IACzC,MAAM,aAAa,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IAC5C,MAAM,cAAc,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IAE7C,MAAM,OAAO,GAAG,SAAS,CAAC,UAAU,EAAE,CAAC;IACvC,MAAM,CAAC,UAAU,EAAE,aAAa,EAAE,eAAe,CAAC,GAAG,OAAO,CAAC;IAG7D,MAAM,aAAa,GAAG,SAAS,CAAC,YAAY,CAAC,KAAK,CAAC,CAAC;IAEpD,MAAM,OAAO,GAAG,IAAI,CAAC,UAAU,CAC7B,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,EAC1B,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,EAC1B,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,CAC3B,CAAC;IAEF,MAAM,UAAU,GAAG,IAAI,CAAC,UAAU,CAChC,aAAa,CAAC,CAAC,CAAC,GAAG,aAAa,EAChC,aAAa,CAAC,CAAC,CAAC,GAAG,aAAa,EAChC,aAAa,CAAC,CAAC,CAAC,GAAG,aAAa,CACjC,CAAC;IAEF,MAAM,YAAY,GAAG,IAAI,CAAC,UAAU,CAClC,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,EACnC,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,EACnC,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,CACpC,CAAC;IAEF,MAAM,SAAS,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;IAChC,MAAM,SAAS,GAAG,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;IAEhD,KAAK,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,IAAI,IAAI,EAAE,CAAC,EAAE,EAAE;QACjC,KAAK,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,IAAI,IAAI,EAAE,CAAC,EAAE,EAAE;YACjC,KAAK,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,IAAI,IAAI,EAAE,CAAC,EAAE,EAAE;gBACjC,MAAM,QAAQ,GAAiB,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;gBACzC,MAAM,EAAE,GAAG,CAAC,GAAG,IAAI,CAAC;gBACpB,MAAM,EAAE,GAAG,CAAC,GAAG,IAAI,CAAC;gBACpB,MAAM,EAAE,GAAG,CAAC,GAAG,IAAI,CAAC;gBAEpB,MAAM,UAAU,GAAG,aAAa,CAAC;gBAEjC,MAAM,QAAQ,GAAiB;oBAC7B,UAAU,CAAC,CAAC,CAAC;wBACX,EAAE,GAAG,OAAO,CAAC,CAAC,CAAC;wBACf,EAAE,GAAG,UAAU,CAAC,CAAC,CAAC;wBAClB,EAAE,GAAG,YAAY,CAAC,CAAC,CAAC;oBACtB,UAAU,CAAC,CAAC,CAAC;wBACX,EAAE,GAAG,OAAO,CAAC,CAAC,CAAC;wBACf,EAAE,GAAG,UAAU,CAAC,CAAC,CAAC;wBAClB,EAAE,GAAG,YAAY,CAAC,CAAC,CAAC;oBACtB,UAAU,CAAC,CAAC,CAAC;wBACX,EAAE,GAAG,OAAO,CAAC,CAAC,CAAC;wBACf,EAAE,GAAG,UAAU,CAAC,CAAC,CAAC;wBAClB,EAAE,GAAG,YAAY,CAAC,CAAC,CAAC;iBACvB,CAAC;gBAEF,IAAI,cAAc,CAAC,QAAQ,EAAE,QAAQ,CAAC,EAAE;oBACtC,MAAM,KAAK,GAAG,CAAC,GAAG,SAAS,GAAG,CAAC,GAAG,SAAS,GAAG,CAAC,CAAC;oBAChD,MAAM,KAAK,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC;oBAEhC,QAAQ,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,QAAQ,EAAE,CAAC,CAAC;iBAChD;aACF;SACF;KACF;AACH,CAAC"}
@@ -1,4 +1,4 @@
1
1
  import type { Types } from '@cornerstonejs/core';
2
2
  import type { vtkImageData } from '@kitware/vtk.js/Common/DataModel/ImageData';
3
3
  import { PointInShapeCallback } from './pointInShapeCallback';
4
- export default function pointInSurroundingSphereCallback(viewport: Types.IVolumeViewport, imageData: vtkImageData, circlePoints: [Types.Point3, Types.Point3], callback: PointInShapeCallback): void;
4
+ export default function pointInSurroundingSphereCallback(imageData: vtkImageData, circlePoints: [Types.Point3, Types.Point3], callback: PointInShapeCallback, viewport?: Types.IVolumeViewport): void;
@@ -1,10 +1,47 @@
1
1
  import { utilities as csUtils } from '@cornerstonejs/core';
2
2
  import { vec3 } from 'gl-matrix';
3
3
  import { pointInSphere } from './math/sphere';
4
- import { getBoundingBoxAroundShape } from './segmentation/getBoundingBoxUtils';
5
4
  import pointInShapeCallback from './pointInShapeCallback';
5
+ import { getBoundingBoxAroundShape } from './boundingBox';
6
6
  const { transformWorldToIndex } = csUtils;
7
- export default function pointInSurroundingSphereCallback(viewport, imageData, circlePoints, callback) {
7
+ export default function pointInSurroundingSphereCallback(imageData, circlePoints, callback, viewport) {
8
+ const { boundsIJK, centerWorld, radiusWorld } = _getBounds(circlePoints, imageData, viewport);
9
+ const sphereObj = {
10
+ center: centerWorld,
11
+ radius: radiusWorld,
12
+ };
13
+ pointInShapeCallback(imageData, (pointLPS) => pointInSphere(sphereObj, pointLPS), callback, boundsIJK);
14
+ }
15
+ function _getBounds(circlePoints, imageData, viewport) {
16
+ const [bottom, top] = circlePoints;
17
+ const centerWorld = vec3.fromValues((bottom[0] + top[0]) / 2, (bottom[1] + top[1]) / 2, (bottom[2] + top[2]) / 2);
18
+ const radiusWorld = vec3.distance(bottom, top) / 2;
19
+ let boundsIJK;
20
+ if (!viewport) {
21
+ const centerIJK = transformWorldToIndex(imageData, centerWorld);
22
+ const spacings = imageData.getSpacing();
23
+ const minSpacing = Math.min(...spacings);
24
+ const maxRadiusIJK = Math.ceil(radiusWorld / minSpacing);
25
+ boundsIJK = [
26
+ [centerIJK[0] - maxRadiusIJK, centerIJK[0] + maxRadiusIJK],
27
+ [centerIJK[1] - maxRadiusIJK, centerIJK[1] + maxRadiusIJK],
28
+ [centerIJK[2] - maxRadiusIJK, centerIJK[2] + maxRadiusIJK],
29
+ ];
30
+ return {
31
+ boundsIJK,
32
+ centerWorld: centerWorld,
33
+ radiusWorld,
34
+ };
35
+ }
36
+ boundsIJK = _computeBoundsIJKWithCamera(imageData, viewport, circlePoints, centerWorld, radiusWorld);
37
+ return {
38
+ boundsIJK,
39
+ centerWorld: centerWorld,
40
+ radiusWorld,
41
+ };
42
+ }
43
+ function _computeBoundsIJKWithCamera(imageData, viewport, circlePoints, centerWorld, radiusWorld) {
44
+ const [bottom, top] = circlePoints;
8
45
  const dimensions = imageData.getDimensions();
9
46
  const camera = viewport.getCamera();
10
47
  const viewUp = vec3.fromValues(camera.viewUp[0], camera.viewUp[1], camera.viewUp[2]);
@@ -12,9 +49,6 @@ export default function pointInSurroundingSphereCallback(viewport, imageData, ci
12
49
  let viewRight = vec3.create();
13
50
  vec3.cross(viewRight, viewUp, viewPlaneNormal);
14
51
  viewRight = [-viewRight[0], -viewRight[1], -viewRight[2]];
15
- const [bottom, top] = circlePoints;
16
- const sphereCenterWorld = vec3.fromValues((bottom[0] + top[0]) / 2, (bottom[1] + top[1]) / 2, (bottom[2] + top[2]) / 2);
17
- const radiusWorld = vec3.distance(bottom, top) / 2;
18
52
  const topLeftWorld = vec3.create();
19
53
  const bottomRightWorld = vec3.create();
20
54
  vec3.scaleAndAdd(topLeftWorld, top, viewPlaneNormal, radiusWorld);
@@ -26,10 +60,6 @@ export default function pointInSurroundingSphereCallback(viewport, imageData, ci
26
60
  (transformWorldToIndex(imageData, bottomRightWorld)),
27
61
  ];
28
62
  const boundsIJK = getBoundingBoxAroundShape(sphereCornersIJK, dimensions);
29
- const sphereObj = {
30
- center: sphereCenterWorld,
31
- radius: radiusWorld,
32
- };
33
- pointInShapeCallback(imageData, (pointLPS) => pointInSphere(sphereObj, pointLPS), callback, boundsIJK);
63
+ return boundsIJK;
34
64
  }
35
65
  //# sourceMappingURL=pointInSurroundingSphereCallback.js.map
@@ -1 +1 @@
1
- {"version":3,"file":"pointInSurroundingSphereCallback.js","sourceRoot":"","sources":["../../../src/utilities/pointInSurroundingSphereCallback.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,IAAI,OAAO,EAAE,MAAM,qBAAqB,CAAC;AAI3D,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AACjC,OAAO,EAAE,aAAa,EAAE,MAAM,eAAe,CAAC;AAC9C,OAAO,EAAE,yBAAyB,EAAE,MAAM,oCAAoC,CAAC;AAC/E,OAAO,oBAEN,MAAM,wBAAwB,CAAC;AAEhC,MAAM,EAAE,qBAAqB,EAAE,GAAG,OAAO,CAAC;AAgB1C,MAAM,CAAC,OAAO,UAAU,gCAAgC,CACtD,QAA+B,EAC/B,SAAuB,EACvB,YAA0C,EAC1C,QAA8B;IAE9B,MAAM,UAAU,GAAG,SAAS,CAAC,aAAa,EAAkB,CAAC;IAC7D,MAAM,MAAM,GAAG,QAAQ,CAAC,SAAS,EAAE,CAAC;IAKpC,MAAM,MAAM,GAAG,IAAI,CAAC,UAAU,CAC5B,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,EAChB,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,EAChB,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,CACjB,CAAC;IACF,MAAM,eAAe,GAAG,IAAI,CAAC,UAAU,CACrC,MAAM,CAAC,eAAe,CAAC,CAAC,CAAC,EACzB,MAAM,CAAC,eAAe,CAAC,CAAC,CAAC,EACzB,MAAM,CAAC,eAAe,CAAC,CAAC,CAAC,CAC1B,CAAC;IACF,IAAI,SAAS,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC;IAE9B,IAAI,CAAC,KAAK,CAAC,SAAS,EAAE,MAAM,EAAE,eAAe,CAAC,CAAC;IAC/C,SAAS,GAAG,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,EAAE,CAAC,SAAS,CAAC,CAAC,CAAC,EAAE,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC;IAE1D,MAAM,CAAC,MAAM,EAAE,GAAG,CAAC,GAAG,YAAY,CAAC;IAGnC,MAAM,iBAAiB,GAAG,IAAI,CAAC,UAAU,CACvC,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,EACxB,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,EACxB,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CACzB,CAAC;IAGF,MAAM,WAAW,GAAG,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC;IAQnD,MAAM,YAAY,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC;IACnC,MAAM,gBAAgB,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC;IAEvC,IAAI,CAAC,WAAW,CAAC,YAAY,EAAE,GAAG,EAAE,eAAe,EAAE,WAAW,CAAC,CAAC;IAClE,IAAI,CAAC,WAAW,CAAC,gBAAgB,EAAE,MAAM,EAAE,eAAe,EAAE,CAAC,WAAW,CAAC,CAAC;IAG1E,IAAI,CAAC,WAAW,CAAC,YAAY,EAAE,YAAY,EAAE,SAAS,EAAE,CAAC,WAAW,CAAC,CAAC;IACtE,IAAI,CAAC,WAAW,CAAC,gBAAgB,EAAE,gBAAgB,EAAE,SAAS,EAAE,WAAW,CAAC,CAAC;IAI7E,MAAM,gBAAgB,GAAG;QACT,qBAAqB,CAAC,SAAS,EAAgB,YAAY,CAAC;QAC5D,CACZ,qBAAqB,CAAC,SAAS,EAAgB,gBAAgB,CAAC,CACjE;KACF,CAAC;IAGF,MAAM,SAAS,GAAG,yBAAyB,CAAC,gBAAgB,EAAE,UAAU,CAAC,CAAC;IAE1E,MAAM,SAAS,GAAG;QAChB,MAAM,EAAE,iBAAiB;QACzB,MAAM,EAAE,WAAW;KACpB,CAAC;IAEF,oBAAoB,CAClB,SAAS,EACT,CAAC,QAAQ,EAAE,EAAE,CAAC,aAAa,CAAC,SAAS,EAAE,QAAQ,CAAC,EAChD,QAAQ,EACR,SAAS,CACV,CAAC;AACJ,CAAC"}
1
+ {"version":3,"file":"pointInSurroundingSphereCallback.js","sourceRoot":"","sources":["../../../src/utilities/pointInSurroundingSphereCallback.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,IAAI,OAAO,EAAE,MAAM,qBAAqB,CAAC;AAI3D,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AACjC,OAAO,EAAE,aAAa,EAAE,MAAM,eAAe,CAAC;AAC9C,OAAO,oBAEN,MAAM,wBAAwB,CAAC;AAEhC,OAAO,EAAE,yBAAyB,EAAE,MAAM,eAAe,CAAC;AAE1D,MAAM,EAAE,qBAAqB,EAAE,GAAG,OAAO,CAAC;AAiB1C,MAAM,CAAC,OAAO,UAAU,gCAAgC,CACtD,SAAuB,EACvB,YAA0C,EAC1C,QAA8B,EAC9B,QAAgC;IAMhC,MAAM,EAAE,SAAS,EAAE,WAAW,EAAE,WAAW,EAAE,GAAG,UAAU,CACxD,YAAY,EACZ,SAAS,EACT,QAAQ,CACT,CAAC;IAEF,MAAM,SAAS,GAAG;QAChB,MAAM,EAAE,WAAW;QACnB,MAAM,EAAE,WAAW;KACpB,CAAC;IAEF,oBAAoB,CAClB,SAAS,EACT,CAAC,QAAQ,EAAE,EAAE,CAAC,aAAa,CAAC,SAAS,EAAE,QAAQ,CAAC,EAChD,QAAQ,EACR,SAAS,CACV,CAAC;AACJ,CAAC;AAED,SAAS,UAAU,CACjB,YAA0C,EAC1C,SAAuB,EACvB,QAAQ;IAMR,MAAM,CAAC,MAAM,EAAE,GAAG,CAAC,GAAG,YAAY,CAAC;IAGnC,MAAM,WAAW,GAAG,IAAI,CAAC,UAAU,CACjC,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,EACxB,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,EACxB,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CACzB,CAAC;IAGF,MAAM,WAAW,GAAG,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC;IAEnD,IAAI,SAAS,CAAC;IAEd,IAAI,CAAC,QAAQ,EAAE;QAUb,MAAM,SAAS,GAAG,qBAAqB,CACrC,SAAS,EACT,WAA2B,CAC5B,CAAC;QAEF,MAAM,QAAQ,GAAG,SAAS,CAAC,UAAU,EAAE,CAAC;QACxC,MAAM,UAAU,GAAG,IAAI,CAAC,GAAG,CAAC,GAAG,QAAQ,CAAC,CAAC;QAEzC,MAAM,YAAY,GAAG,IAAI,CAAC,IAAI,CAAC,WAAW,GAAG,UAAU,CAAC,CAAC;QAEzD,SAAS,GAAG;YACV,CAAC,SAAS,CAAC,CAAC,CAAC,GAAG,YAAY,EAAE,SAAS,CAAC,CAAC,CAAC,GAAG,YAAY,CAAC;YAC1D,CAAC,SAAS,CAAC,CAAC,CAAC,GAAG,YAAY,EAAE,SAAS,CAAC,CAAC,CAAC,GAAG,YAAY,CAAC;YAC1D,CAAC,SAAS,CAAC,CAAC,CAAC,GAAG,YAAY,EAAE,SAAS,CAAC,CAAC,CAAC,GAAG,YAAY,CAAC;SAC3D,CAAC;QAEF,OAAO;YACL,SAAS;YACT,WAAW,EAAE,WAA2B;YACxC,WAAW;SACZ,CAAC;KACH;IAED,SAAS,GAAG,2BAA2B,CACrC,SAAS,EACT,QAAQ,EACR,YAAY,EACZ,WAAW,EACX,WAAW,CACZ,CAAC;IAEF,OAAO;QACL,SAAS;QACT,WAAW,EAAE,WAA2B;QACxC,WAAW;KACZ,CAAC;AACJ,CAAC;AAED,SAAS,2BAA2B,CAClC,SAAS,EACT,QAAQ,EACR,YAAY,EACZ,WAAW,EACX,WAAW;IAEX,MAAM,CAAC,MAAM,EAAE,GAAG,CAAC,GAAG,YAAY,CAAC;IAEnC,MAAM,UAAU,GAAG,SAAS,CAAC,aAAa,EAAkB,CAAC;IAC7D,MAAM,MAAM,GAAG,QAAQ,CAAC,SAAS,EAAE,CAAC;IAKpC,MAAM,MAAM,GAAG,IAAI,CAAC,UAAU,CAC5B,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,EAChB,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,EAChB,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,CACjB,CAAC;IACF,MAAM,eAAe,GAAG,IAAI,CAAC,UAAU,CACrC,MAAM,CAAC,eAAe,CAAC,CAAC,CAAC,EACzB,MAAM,CAAC,eAAe,CAAC,CAAC,CAAC,EACzB,MAAM,CAAC,eAAe,CAAC,CAAC,CAAC,CAC1B,CAAC;IACF,IAAI,SAAS,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC;IAE9B,IAAI,CAAC,KAAK,CAAC,SAAS,EAAE,MAAM,EAAE,eAAe,CAAC,CAAC;IAC/C,SAAS,GAAG,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,EAAE,CAAC,SAAS,CAAC,CAAC,CAAC,EAAE,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC;IAQ1D,MAAM,YAAY,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC;IACnC,MAAM,gBAAgB,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC;IAEvC,IAAI,CAAC,WAAW,CAAC,YAAY,EAAE,GAAG,EAAE,eAAe,EAAE,WAAW,CAAC,CAAC;IAClE,IAAI,CAAC,WAAW,CAAC,gBAAgB,EAAE,MAAM,EAAE,eAAe,EAAE,CAAC,WAAW,CAAC,CAAC;IAG1E,IAAI,CAAC,WAAW,CAAC,YAAY,EAAE,YAAY,EAAE,SAAS,EAAE,CAAC,WAAW,CAAC,CAAC;IACtE,IAAI,CAAC,WAAW,CAAC,gBAAgB,EAAE,gBAAgB,EAAE,SAAS,EAAE,WAAW,CAAC,CAAC;IAI7E,MAAM,gBAAgB,GAAG;QACT,qBAAqB,CAAC,SAAS,EAAgB,YAAY,CAAC;QAC5D,CACZ,qBAAqB,CAAC,SAAS,EAAgB,gBAAgB,CAAC,CACjE;KACF,CAAC;IAGF,MAAM,SAAS,GAAG,yBAAyB,CAAC,gBAAgB,EAAE,UAAU,CAAC,CAAC;IAE1E,OAAO,SAAS,CAAC;AACnB,CAAC"}
@@ -0,0 +1,5 @@
1
+ declare type Options = {
2
+ numSlicesToProject?: number;
3
+ };
4
+ declare function getBoundsIJKFromRectangleAnnotations(annotations: any, referenceVolume: any, options?: Options): any;
5
+ export default getBoundsIJKFromRectangleAnnotations;
@@ -0,0 +1,45 @@
1
+ import { utilities as csUtils } from '@cornerstonejs/core';
2
+ import getBoundingBoxAroundShape from '../boundingBox/getBoundingBoxAroundShape';
3
+ import extend2DBoundingBoxInViewAxis from '../boundingBox/extend2DBoundingBoxInViewAxis';
4
+ function getBoundsIJKFromRectangleAnnotations(annotations, referenceVolume, options = {}) {
5
+ const AllBoundsIJK = [];
6
+ annotations.forEach((annotation) => {
7
+ const { data } = annotation;
8
+ const { points } = data.handles;
9
+ const { imageData, dimensions } = referenceVolume;
10
+ let pointsToUse = points;
11
+ if (data.cachedStats?.projectionPoints) {
12
+ const { projectionPoints } = data.cachedStats;
13
+ pointsToUse = [].concat(...projectionPoints);
14
+ }
15
+ const rectangleCornersIJK = pointsToUse.map((world) => csUtils.transformWorldToIndex(imageData, world));
16
+ let boundsIJK = getBoundingBoxAroundShape(rectangleCornersIJK, dimensions);
17
+ if (options.numSlicesToProject && !data.cachedStats?.projectionPoints) {
18
+ boundsIJK = extend2DBoundingBoxInViewAxis(boundsIJK, options.numSlicesToProject);
19
+ }
20
+ AllBoundsIJK.push(boundsIJK);
21
+ });
22
+ if (AllBoundsIJK.length === 1) {
23
+ return AllBoundsIJK[0];
24
+ }
25
+ const boundsIJK = AllBoundsIJK.reduce((accumulator, currentValue) => {
26
+ return {
27
+ iMin: Math.min(accumulator.iMin, currentValue.iMin),
28
+ jMin: Math.min(accumulator.jMin, currentValue.jMin),
29
+ kMin: Math.min(accumulator.kMin, currentValue.kMin),
30
+ iMax: Math.max(accumulator.iMax, currentValue.iMax),
31
+ jMax: Math.max(accumulator.jMax, currentValue.jMax),
32
+ kMax: Math.max(accumulator.kMax, currentValue.kMax),
33
+ };
34
+ }, {
35
+ iMin: Infinity,
36
+ jMin: Infinity,
37
+ kMin: Infinity,
38
+ iMax: -Infinity,
39
+ jMax: -Infinity,
40
+ kMax: -Infinity,
41
+ });
42
+ return boundsIJK;
43
+ }
44
+ export default getBoundsIJKFromRectangleAnnotations;
45
+ //# sourceMappingURL=getBoundsIJKFromRectangleAnnotations.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"getBoundsIJKFromRectangleAnnotations.js","sourceRoot":"","sources":["../../../../src/utilities/rectangleROITool/getBoundsIJKFromRectangleAnnotations.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,IAAI,OAAO,EAAE,MAAM,qBAAqB,CAAC;AAE3D,OAAO,yBAAyB,MAAM,0CAA0C,CAAC;AACjF,OAAO,6BAA6B,MAAM,8CAA8C,CAAC;AAMzF,SAAS,oCAAoC,CAC3C,WAAW,EACX,eAAe,EACf,UAAU,EAAa;IAEvB,MAAM,YAAY,GAAG,EAAE,CAAC;IACxB,WAAW,CAAC,OAAO,CAAC,CAAC,UAAU,EAAE,EAAE;QACjC,MAAM,EAAE,IAAI,EAAE,GAAG,UAAU,CAAC;QAC5B,MAAM,EAAE,MAAM,EAAE,GAAG,IAAI,CAAC,OAAO,CAAC;QAEhC,MAAM,EAAE,SAAS,EAAE,UAAU,EAAE,GAAG,eAAe,CAAC;QAElD,IAAI,WAAW,GAAG,MAAM,CAAC;QAEzB,IAAI,IAAI,CAAC,WAAW,EAAE,gBAAgB,EAAE;YACtC,MAAM,EAAE,gBAAgB,EAAE,GAAG,IAAI,CAAC,WAAW,CAAC;YAC9C,WAAW,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,gBAAgB,CAAC,CAAC;SAC9C;QAED,MAAM,mBAAmB,GAAG,WAAW,CAAC,GAAG,CACzC,CAAC,KAAK,EAAE,EAAE,CAAC,OAAO,CAAC,qBAAqB,CAAC,SAAS,EAAE,KAAK,CAAiB,CAC3E,CAAC;QACF,IAAI,SAAS,GAAG,yBAAyB,CAAC,mBAAmB,EAAE,UAAU,CAAC,CAAC;QAI3E,IAAI,OAAO,CAAC,kBAAkB,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,gBAAgB,EAAE;YACrE,SAAS,GAAG,6BAA6B,CACvC,SAAS,EACT,OAAO,CAAC,kBAAkB,CAC3B,CAAC;SACH;QAED,YAAY,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;IAC/B,CAAC,CAAC,CAAC;IAEH,IAAI,YAAY,CAAC,MAAM,KAAK,CAAC,EAAE;QAC7B,OAAO,YAAY,CAAC,CAAC,CAAC,CAAC;KACxB;IAID,MAAM,SAAS,GAAG,YAAY,CAAC,MAAM,CACnC,CAAC,WAAW,EAAE,YAAY,EAAE,EAAE;QAC5B,OAAO;YACL,IAAI,EAAE,IAAI,CAAC,GAAG,CAAC,WAAW,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;YACnD,IAAI,EAAE,IAAI,CAAC,GAAG,CAAC,WAAW,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;YACnD,IAAI,EAAE,IAAI,CAAC,GAAG,CAAC,WAAW,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;YACnD,IAAI,EAAE,IAAI,CAAC,GAAG,CAAC,WAAW,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;YACnD,IAAI,EAAE,IAAI,CAAC,GAAG,CAAC,WAAW,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;YACnD,IAAI,EAAE,IAAI,CAAC,GAAG,CAAC,WAAW,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;SACpD,CAAC;IACJ,CAAC,EACD;QACE,IAAI,EAAE,QAAQ;QACd,IAAI,EAAE,QAAQ;QACd,IAAI,EAAE,QAAQ;QACd,IAAI,EAAE,CAAC,QAAQ;QACf,IAAI,EAAE,CAAC,QAAQ;QACf,IAAI,EAAE,CAAC,QAAQ;KAChB,CACF,CAAC;IAEF,OAAO,SAAS,CAAC;AACnB,CAAC;AAED,eAAe,oCAAoC,CAAC"}
@@ -0,0 +1,2 @@
1
+ import getBoundsIJKFromRectangleAnnotations from './getBoundsIJKFromRectangleAnnotations';
2
+ export { getBoundsIJKFromRectangleAnnotations };
@@ -0,0 +1,3 @@
1
+ import getBoundsIJKFromRectangleAnnotations from './getBoundsIJKFromRectangleAnnotations';
2
+ export { getBoundsIJKFromRectangleAnnotations };
3
+ //# sourceMappingURL=index.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/utilities/rectangleROITool/index.ts"],"names":[],"mappings":"AAAA,OAAO,oCAAoC,MAAM,wCAAwC,CAAC;AAE1F,OAAO,EAAE,oCAAoC,EAAE,CAAC"}
@@ -1,7 +1,7 @@
1
- import { getBoundingBoxAroundShape, extend2DBoundingBoxInViewAxis } from './getBoundingBoxUtils';
2
1
  import thresholdVolumeByRange from './thresholdVolumeByRange';
2
+ import rectangleROIThresholdVolumeByRange from './rectangleROIThresholdVolumeByRange';
3
3
  import createMergedLabelmapForIndex from './createMergedLabelmapForIndex';
4
4
  import isValidRepresentationConfig from './isValidRepresentationConfig';
5
5
  import getDefaultRepresentationConfig from './getDefaultRepresentationConfig';
6
6
  import createLabelmapVolumeForViewport from './createLabelmapVolumeForViewport';
7
- export { getBoundingBoxAroundShape, extend2DBoundingBoxInViewAxis, thresholdVolumeByRange, createMergedLabelmapForIndex, isValidRepresentationConfig, getDefaultRepresentationConfig, createLabelmapVolumeForViewport, };
7
+ export { thresholdVolumeByRange, createMergedLabelmapForIndex, isValidRepresentationConfig, getDefaultRepresentationConfig, createLabelmapVolumeForViewport, rectangleROIThresholdVolumeByRange, };
@@ -1,8 +1,8 @@
1
- import { getBoundingBoxAroundShape, extend2DBoundingBoxInViewAxis, } from './getBoundingBoxUtils';
2
1
  import thresholdVolumeByRange from './thresholdVolumeByRange';
2
+ import rectangleROIThresholdVolumeByRange from './rectangleROIThresholdVolumeByRange';
3
3
  import createMergedLabelmapForIndex from './createMergedLabelmapForIndex';
4
4
  import isValidRepresentationConfig from './isValidRepresentationConfig';
5
5
  import getDefaultRepresentationConfig from './getDefaultRepresentationConfig';
6
6
  import createLabelmapVolumeForViewport from './createLabelmapVolumeForViewport';
7
- export { getBoundingBoxAroundShape, extend2DBoundingBoxInViewAxis, thresholdVolumeByRange, createMergedLabelmapForIndex, isValidRepresentationConfig, getDefaultRepresentationConfig, createLabelmapVolumeForViewport, };
7
+ export { thresholdVolumeByRange, createMergedLabelmapForIndex, isValidRepresentationConfig, getDefaultRepresentationConfig, createLabelmapVolumeForViewport, rectangleROIThresholdVolumeByRange, };
8
8
  //# sourceMappingURL=index.js.map
@@ -1 +1 @@
1
- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/utilities/segmentation/index.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,yBAAyB,EACzB,6BAA6B,GAC9B,MAAM,uBAAuB,CAAC;AAC/B,OAAO,sBAAsB,MAAM,0BAA0B,CAAC;AAC9D,OAAO,4BAA4B,MAAM,gCAAgC,CAAC;AAC1E,OAAO,2BAA2B,MAAM,+BAA+B,CAAC;AACxE,OAAO,8BAA8B,MAAM,kCAAkC,CAAC;AAC9E,OAAO,+BAA+B,MAAM,mCAAmC,CAAC;AAEhF,OAAO,EACL,yBAAyB,EACzB,6BAA6B,EAC7B,sBAAsB,EACtB,4BAA4B,EAC5B,2BAA2B,EAC3B,8BAA8B,EAC9B,+BAA+B,GAChC,CAAC"}
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/utilities/segmentation/index.ts"],"names":[],"mappings":"AAAA,OAAO,sBAAsB,MAAM,0BAA0B,CAAC;AAC9D,OAAO,kCAAkC,MAAM,sCAAsC,CAAC;AACtF,OAAO,4BAA4B,MAAM,gCAAgC,CAAC;AAC1E,OAAO,2BAA2B,MAAM,+BAA+B,CAAC;AACxE,OAAO,8BAA8B,MAAM,kCAAkC,CAAC;AAC9E,OAAO,+BAA+B,MAAM,mCAAmC,CAAC;AAEhF,OAAO,EACL,sBAAsB,EACtB,4BAA4B,EAC5B,2BAA2B,EAC3B,8BAA8B,EAC9B,+BAA+B,EAC/B,kCAAkC,GACnC,CAAC"}
@@ -0,0 +1,19 @@
1
+ import type { Types } from '@cornerstonejs/core';
2
+ export declare type ThresholdRangeOptions = {
3
+ lower: number;
4
+ upper: number;
5
+ numSlicesToProject?: number;
6
+ overwrite: boolean;
7
+ };
8
+ export declare type AnnotationForThresholding = {
9
+ data: {
10
+ handles: {
11
+ points: Types.Point3[];
12
+ };
13
+ cachedStats?: {
14
+ projectionPoints?: Types.Point3[][];
15
+ };
16
+ };
17
+ };
18
+ declare function rectangleROIThresholdVolumeByRange(annotationUIDs: string[], segmentationVolume: Types.IImageVolume, referenceVolumes: Types.IImageVolume[], options: ThresholdRangeOptions): Types.IImageVolume;
19
+ export default rectangleROIThresholdVolumeByRange;
@@ -0,0 +1,37 @@
1
+ import { state } from '../../stateManagement/annotation';
2
+ import { RectangleROIStartEndThresholdTool, RectangleROIThresholdTool, } from '../../tools';
3
+ import thresholdVolumeByRange from './thresholdVolumeByRange';
4
+ import getBoundsIJKFromRectangleAnnotations from '../rectangleROITool/getBoundsIJKFromRectangleAnnotations';
5
+ function rectangleROIThresholdVolumeByRange(annotationUIDs, segmentationVolume, referenceVolumes, options) {
6
+ if (referenceVolumes.length > 1) {
7
+ throw new Error('thresholding based on more than one reference volumes data is not supported yet');
8
+ }
9
+ const referenceVolume = referenceVolumes[0];
10
+ const annotations = annotationUIDs.map((annotationUID) => {
11
+ return state.getAnnotation(annotationUID);
12
+ });
13
+ _validateAnnotations(annotations);
14
+ const boundsIJK = getBoundsIJKFromRectangleAnnotations(annotations, referenceVolume, options);
15
+ const optionsToUse = {
16
+ lower: options.lower,
17
+ upper: options.upper,
18
+ overwrite: options.overwrite,
19
+ boundsIJK,
20
+ };
21
+ const outputSegmentationVolume = thresholdVolumeByRange(segmentationVolume, referenceVolume, optionsToUse);
22
+ return outputSegmentationVolume;
23
+ }
24
+ function _validateAnnotations(annotations) {
25
+ const validToolNames = [
26
+ RectangleROIThresholdTool.toolName,
27
+ RectangleROIStartEndThresholdTool.toolName,
28
+ ];
29
+ for (const annotation of annotations) {
30
+ const name = annotation.metadata.toolName;
31
+ if (!validToolNames.includes(name)) {
32
+ throw new Error('rectangleROIThresholdVolumeByRange only supports RectangleROIThreshold and RectangleROIStartEndThreshold annotations');
33
+ }
34
+ }
35
+ }
36
+ export default rectangleROIThresholdVolumeByRange;
37
+ //# sourceMappingURL=rectangleROIThresholdVolumeByRange.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"rectangleROIThresholdVolumeByRange.js","sourceRoot":"","sources":["../../../../src/utilities/segmentation/rectangleROIThresholdVolumeByRange.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,KAAK,EAAE,MAAM,kCAAkC,CAAC;AACzD,OAAO,EACL,iCAAiC,EACjC,yBAAyB,GAC1B,MAAM,aAAa,CAAC;AAErB,OAAO,sBAAsB,MAAM,0BAA0B,CAAC;AAC9D,OAAO,oCAAoC,MAAM,0DAA0D,CAAC;AA+B5G,SAAS,kCAAkC,CACzC,cAAwB,EACxB,kBAAsC,EACtC,gBAAsC,EACtC,OAA8B;IAE9B,IAAI,gBAAgB,CAAC,MAAM,GAAG,CAAC,EAAE;QAC/B,MAAM,IAAI,KAAK,CACb,iFAAiF,CAClF,CAAC;KACH;IAED,MAAM,eAAe,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC;IAE5C,MAAM,WAAW,GAAG,cAAc,CAAC,GAAG,CAAC,CAAC,aAAa,EAAE,EAAE;QACvD,OAAO,KAAK,CAAC,aAAa,CAAC,aAAa,CAAC,CAAC;IAC5C,CAAC,CAAC,CAAC;IAEH,oBAAoB,CAAC,WAAW,CAAC,CAAC;IAElC,MAAM,SAAS,GAAG,oCAAoC,CACpD,WAAW,EACX,eAAe,EACf,OAAO,CACR,CAAC;IAEF,MAAM,YAAY,GAAG;QACnB,KAAK,EAAE,OAAO,CAAC,KAAK;QACpB,KAAK,EAAE,OAAO,CAAC,KAAK;QACpB,SAAS,EAAE,OAAO,CAAC,SAAS;QAC5B,SAAS;KACV,CAAC;IAEF,MAAM,wBAAwB,GAAG,sBAAsB,CACrD,kBAAkB,EAClB,eAAe,EACf,YAAY,CACb,CAAC;IAEF,OAAO,wBAAwB,CAAC;AAClC,CAAC;AAED,SAAS,oBAAoB,CAAC,WAAW;IACvC,MAAM,cAAc,GAAG;QACrB,yBAAyB,CAAC,QAAQ;QAClC,iCAAiC,CAAC,QAAQ;KAC3C,CAAC;IAEF,KAAK,MAAM,UAAU,IAAI,WAAW,EAAE;QACpC,MAAM,IAAI,GAAG,UAAU,CAAC,QAAQ,CAAC,QAAQ,CAAC;QAC1C,IAAI,CAAC,cAAc,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE;YAClC,MAAM,IAAI,KAAK,CACb,sHAAsH,CACvH,CAAC;SACH;KACF;AACH,CAAC;AAED,eAAe,kCAAkC,CAAC"}
@@ -1,24 +1,10 @@
1
1
  import type { Types } from '@cornerstonejs/core';
2
- import { ToolGroupSpecificRepresentation } from '../../types/SegmentationStateTypes';
2
+ import { BoundsIJK } from '../../types';
3
3
  export declare type ThresholdRangeOptions = {
4
- higherThreshold: number;
5
- lowerThreshold: number;
6
- numSlicesToProject?: number;
4
+ upper: number;
5
+ lower: number;
6
+ boundsIJK: BoundsIJK;
7
7
  overwrite: boolean;
8
8
  };
9
- export declare type AnnotationForThresholding = {
10
- metadata: {
11
- enabledElement: Types.IEnabledElement;
12
- };
13
- data: {
14
- handles: {
15
- points: Types.Point3[];
16
- };
17
- cachedStats?: {
18
- projectionPoints?: Types.Point3[][];
19
- };
20
- };
21
- };
22
- declare function thresholdVolumeByRange(annotations: AnnotationForThresholding[], referenceVolumes: Types.IImageVolume[], segmentationRepresentation: ToolGroupSpecificRepresentation, options: ThresholdRangeOptions): Types.IImageVolume;
23
- export declare function extendBoundingBoxInSliceAxisIfNecessary(boundsIJK: [Types.Point2, Types.Point2, Types.Point2], numSlicesToProject: number): [Types.Point2, Types.Point2, Types.Point2];
9
+ declare function thresholdVolumeByRange(segmentationVolume: Types.IImageVolume, referenceVolume: Types.IImageVolume, options: ThresholdRangeOptions): Types.IImageVolume;
24
10
  export default thresholdVolumeByRange;
@@ -1,60 +1,26 @@
1
- import { cache, utilities as csUtils } from '@cornerstonejs/core';
2
- import { getBoundingBoxAroundShape, extend2DBoundingBoxInViewAxis, } from '../segmentation';
3
1
  import { pointInShapeCallback } from '../../utilities';
4
2
  import { triggerSegmentationDataModified } from '../../stateManagement/segmentation/triggerSegmentationEvents';
5
- import * as SegmentationState from '../../stateManagement/segmentation/segmentationState';
6
- const { transformWorldToIndex } = csUtils;
7
- function thresholdVolumeByRange(annotations, referenceVolumes, segmentationRepresentation, options) {
8
- if (referenceVolumes.length > 1) {
9
- throw new Error('thresholding more than one volumes is not supported yet');
10
- }
11
- const segmentation = SegmentationState.getSegmentation(segmentationRepresentation.segmentationId);
12
- const { segmentationId } = segmentationRepresentation;
13
- if (!segmentation) {
14
- throw new Error('No Segmentation Found');
15
- }
16
- const { type, representationData } = segmentation;
17
- const { volumeId } = representationData[type];
18
- const segmentationVolume = cache.getVolume(volumeId);
3
+ function thresholdVolumeByRange(segmentationVolume, referenceVolume, options) {
19
4
  const { scalarData, imageData: segmentationImageData } = segmentationVolume;
20
- const { lowerThreshold, higherThreshold, numSlicesToProject, overwrite } = options;
5
+ const { overwrite, boundsIJK, upper, lower } = options;
6
+ const { imageData } = referenceVolume;
7
+ const referenceValues = imageData.getPointData().getScalars().getData();
21
8
  if (overwrite) {
22
9
  for (let i = 0; i < scalarData.length; i++) {
23
10
  scalarData[i] = 0;
24
11
  }
25
12
  }
26
- annotations.forEach((annotation) => {
27
- const { data } = annotation;
28
- const { points } = data.handles;
29
- const referenceVolume = referenceVolumes[0];
30
- const { imageData, dimensions } = referenceVolume;
31
- const values = imageData.getPointData().getScalars().getData();
32
- let pointsToUse = points;
33
- if (data.cachedStats?.projectionPoints) {
34
- const { projectionPoints } = data.cachedStats;
35
- pointsToUse = [].concat(...projectionPoints);
13
+ const callback = ({ index, pointIJK }) => {
14
+ const offset = imageData.computeOffsetIndex(pointIJK);
15
+ const value = referenceValues[offset];
16
+ if (value <= lower || value >= upper) {
17
+ return;
36
18
  }
37
- const rectangleCornersIJK = pointsToUse.map((world) => transformWorldToIndex(imageData, world));
38
- let boundsIJK = getBoundingBoxAroundShape(rectangleCornersIJK, dimensions);
39
- if (numSlicesToProject && !data.cachedStats?.projectionPoints) {
40
- boundsIJK = extendBoundingBoxInSliceAxisIfNecessary(boundsIJK, numSlicesToProject);
41
- }
42
- const callback = ({ index, pointIJK }) => {
43
- const offset = imageData.computeOffsetIndex(pointIJK);
44
- const value = values[offset];
45
- if (value <= lowerThreshold || value >= higherThreshold) {
46
- return;
47
- }
48
- scalarData[index] = 1;
49
- };
50
- pointInShapeCallback(segmentationImageData, () => true, callback, boundsIJK);
51
- });
52
- triggerSegmentationDataModified(segmentationId);
19
+ scalarData[index] = 1;
20
+ };
21
+ pointInShapeCallback(segmentationImageData, () => true, callback, boundsIJK);
22
+ triggerSegmentationDataModified(segmentationVolume.volumeId);
53
23
  return segmentationVolume;
54
24
  }
55
- export function extendBoundingBoxInSliceAxisIfNecessary(boundsIJK, numSlicesToProject) {
56
- const extendedBoundsIJK = extend2DBoundingBoxInViewAxis(boundsIJK, numSlicesToProject);
57
- return extendedBoundsIJK;
58
- }
59
25
  export default thresholdVolumeByRange;
60
26
  //# sourceMappingURL=thresholdVolumeByRange.js.map
@@ -1 +1 @@
1
- {"version":3,"file":"thresholdVolumeByRange.js","sourceRoot":"","sources":["../../../../src/utilities/segmentation/thresholdVolumeByRange.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,SAAS,IAAI,OAAO,EAAE,MAAM,qBAAqB,CAAC;AAGlE,OAAO,EACL,yBAAyB,EACzB,6BAA6B,GAC9B,MAAM,iBAAiB,CAAC;AACzB,OAAO,EAAE,oBAAoB,EAAE,MAAM,iBAAiB,CAAC;AACvD,OAAO,EAAE,+BAA+B,EAAE,MAAM,8DAA8D,CAAC;AAE/G,OAAO,KAAK,iBAAiB,MAAM,sDAAsD,CAAC;AAG1F,MAAM,EAAE,qBAAqB,EAAE,GAAG,OAAO,CAAC;AAgC1C,SAAS,sBAAsB,CAC7B,WAAwC,EACxC,gBAAsC,EACtC,0BAA2D,EAC3D,OAA8B;IAE9B,IAAI,gBAAgB,CAAC,MAAM,GAAG,CAAC,EAAE;QAC/B,MAAM,IAAI,KAAK,CAAC,yDAAyD,CAAC,CAAC;KAC5E;IAED,MAAM,YAAY,GAAG,iBAAiB,CAAC,eAAe,CACpD,0BAA0B,CAAC,cAAc,CAC1C,CAAC;IACF,MAAM,EAAE,cAAc,EAAE,GAAG,0BAA0B,CAAC;IAEtD,IAAI,CAAC,YAAY,EAAE;QACjB,MAAM,IAAI,KAAK,CAAC,uBAAuB,CAAC,CAAC;KAC1C;IAED,MAAM,EAAE,IAAI,EAAE,kBAAkB,EAAE,GAAG,YAAY,CAAC;IAClD,MAAM,EAAE,QAAQ,EAAE,GAAG,kBAAkB,CAAC,IAAI,CAA6B,CAAC;IAE1E,MAAM,kBAAkB,GAAG,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,CAAC;IAErD,MAAM,EAAE,UAAU,EAAE,SAAS,EAAE,qBAAqB,EAAE,GAAG,kBAAkB,CAAC;IAC5E,MAAM,EAAE,cAAc,EAAE,eAAe,EAAE,kBAAkB,EAAE,SAAS,EAAE,GACtE,OAAO,CAAC;IAGV,IAAI,SAAS,EAAE;QACb,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,UAAU,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;YAC1C,UAAU,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;SACnB;KACF;IAED,WAAW,CAAC,OAAO,CAAC,CAAC,UAAU,EAAE,EAAE;QAEjC,MAAM,EAAE,IAAI,EAAE,GAAG,UAAU,CAAC;QAC5B,MAAM,EAAE,MAAM,EAAE,GAAG,IAAI,CAAC,OAAO,CAAC;QAEhC,MAAM,eAAe,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC;QAC5C,MAAM,EAAE,SAAS,EAAE,UAAU,EAAE,GAAG,eAAe,CAAC;QAGlD,MAAM,MAAM,GAAG,SAAS,CAAC,YAAY,EAAE,CAAC,UAAU,EAAE,CAAC,OAAO,EAAE,CAAC;QAE/D,IAAI,WAAW,GAAG,MAAM,CAAC;QAEzB,IAAI,IAAI,CAAC,WAAW,EAAE,gBAAgB,EAAE;YACtC,MAAM,EAAE,gBAAgB,EAAE,GAAG,IAAI,CAAC,WAAW,CAAC;YAC9C,WAAW,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,gBAAgB,CAAC,CAAC;SAC9C;QAED,MAAM,mBAAmB,GAAG,WAAW,CAAC,GAAG,CACzC,CAAC,KAAK,EAAE,EAAE,CAAC,qBAAqB,CAAC,SAAS,EAAE,KAAK,CAAiB,CACnE,CAAC;QACF,IAAI,SAAS,GAAG,yBAAyB,CAAC,mBAAmB,EAAE,UAAU,CAAC,CAAC;QAI3E,IAAI,kBAAkB,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,gBAAgB,EAAE;YAC7D,SAAS,GAAG,uCAAuC,CACjD,SAAS,EACT,kBAAkB,CACnB,CAAC;SACH;QAED,MAAM,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,QAAQ,EAAE,EAAE,EAAE;YACvC,MAAM,MAAM,GAAG,SAAS,CAAC,kBAAkB,CAAC,QAAQ,CAAC,CAAC;YACtD,MAAM,KAAK,GAAG,MAAM,CAAC,MAAM,CAAC,CAAC;YAC7B,IAAI,KAAK,IAAI,cAAc,IAAI,KAAK,IAAI,eAAe,EAAE;gBACvD,OAAO;aACR;YAED,UAAU,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC;QACxB,CAAC,CAAC;QAEF,oBAAoB,CAClB,qBAAqB,EACrB,GAAG,EAAE,CAAC,IAAI,EACV,QAAQ,EACR,SAAS,CACV,CAAC;IACJ,CAAC,CAAC,CAAC;IAEH,+BAA+B,CAAC,cAAc,CAAC,CAAC;IAEhD,OAAO,kBAAkB,CAAC;AAC5B,CAAC;AAED,MAAM,UAAU,uCAAuC,CACrD,SAAqD,EACrD,kBAA0B;IAE1B,MAAM,iBAAiB,GAAG,6BAA6B,CACrD,SAAS,EACT,kBAAkB,CACnB,CAAC;IACF,OAAO,iBAAiB,CAAC;AAC3B,CAAC;AAED,eAAe,sBAAsB,CAAC"}
1
+ {"version":3,"file":"thresholdVolumeByRange.js","sourceRoot":"","sources":["../../../../src/utilities/segmentation/thresholdVolumeByRange.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,oBAAoB,EAAE,MAAM,iBAAiB,CAAC;AACvD,OAAO,EAAE,+BAA+B,EAAE,MAAM,8DAA8D,CAAC;AAkB/G,SAAS,sBAAsB,CAC7B,kBAAsC,EACtC,eAAmC,EACnC,OAA8B;IAE9B,MAAM,EAAE,UAAU,EAAE,SAAS,EAAE,qBAAqB,EAAE,GAAG,kBAAkB,CAAC;IAC5E,MAAM,EAAE,SAAS,EAAE,SAAS,EAAE,KAAK,EAAE,KAAK,EAAE,GAAG,OAAO,CAAC;IAEvD,MAAM,EAAE,SAAS,EAAE,GAAG,eAAe,CAAC;IACtC,MAAM,eAAe,GAAG,SAAS,CAAC,YAAY,EAAE,CAAC,UAAU,EAAE,CAAC,OAAO,EAAE,CAAC;IAGxE,IAAI,SAAS,EAAE;QACb,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,UAAU,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;YAC1C,UAAU,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;SACnB;KACF;IAED,MAAM,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,QAAQ,EAAE,EAAE,EAAE;QACvC,MAAM,MAAM,GAAG,SAAS,CAAC,kBAAkB,CAAC,QAAQ,CAAC,CAAC;QACtD,MAAM,KAAK,GAAG,eAAe,CAAC,MAAM,CAAC,CAAC;QACtC,IAAI,KAAK,IAAI,KAAK,IAAI,KAAK,IAAI,KAAK,EAAE;YACpC,OAAO;SACR;QAGD,UAAU,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC;IACxB,CAAC,CAAC;IAEF,oBAAoB,CAAC,qBAAqB,EAAE,GAAG,EAAE,CAAC,IAAI,EAAE,QAAQ,EAAE,SAAS,CAAC,CAAC;IAE7E,+BAA+B,CAAC,kBAAkB,CAAC,QAAQ,CAAC,CAAC;IAE7D,OAAO,kBAAkB,CAAC;AAC5B,CAAC;AAED,eAAe,sBAAsB,CAAC"}