@cornerstonejs/adapters 0.2.0 → 0.3.0

package/src/adapters/Cornerstone/RectangleRoi.js

@@ -1,92 +0,0 @@
-import { utilities } from "dcmjs";
-import MeasurementReport from "./MeasurementReport";
-import CORNERSTONE_4_TAG from "./cornerstone4Tag";
-
-const { Polyline: TID300Polyline } = utilities.TID300;
-
-class RectangleRoi {
-    static getMeasurementData(MeasurementGroup) {
-        const { defaultState, SCOORDGroup, NUMGroup } =
-            MeasurementReport.getSetupMeasurementData(MeasurementGroup);
-
-        const state = {
-            ...defaultState,
-            toolType: RectangleRoi.toolType,
-            handles: {
-                start: {},
-                end: {},
-                textBox: {
-                    active: false,
-                    hasMoved: false,
-                    movesIndependently: false,
-                    drawnIndependently: true,
-                    allowedOutsideImage: true,
-                    hasBoundingBox: true
-                },
-                initialRotation: 0
-            },
-            cachedStats: {
-                area: NUMGroup ? NUMGroup.MeasuredValueSequence.NumericValue : 0
-            },
-            color: undefined,
-            invalidated: true
-        };
-        const intermediate = {};
-
-        [
-            state.handles.start.x,
-            state.handles.start.y,
-            intermediate.x,
-            intermediate.y,
-            state.handles.end.x,
-            state.handles.end.y
-        ] = SCOORDGroup.GraphicData;
-
-        return state;
-    }
-
-    static getTID300RepresentationArguments(tool) {
-        const { finding, findingSites, cachedStats = {}, handles } = tool;
-        const { start, end } = handles;
-        const points = [
-            start,
-            { x: start.x, y: end.y },
-            end,
-            { x: end.x, y: start.y }
-        ];
-        const { area, perimeter } = cachedStats;
-
-        const trackingIdentifierTextValue =
-            "cornerstoneTools@^4.0.0:RectangleRoi";
-
-        return {
-            points,
-            area,
-            perimeter,
-            trackingIdentifierTextValue,
-            finding,
-            findingSites: findingSites || []
-        };
-    }
-}
-
-RectangleRoi.toolType = "RectangleRoi";
-RectangleRoi.utilityToolType = "RectangleRoi";
-RectangleRoi.TID300Representation = TID300Polyline;
-RectangleRoi.isValidCornerstoneTrackingIdentifier = TrackingIdentifier => {
-    if (!TrackingIdentifier.includes(":")) {
-        return false;
-    }
-
-    const [cornerstone4Tag, toolType] = TrackingIdentifier.split(":");
-
-    if (cornerstone4Tag !== CORNERSTONE_4_TAG) {
-        return false;
-    }
-
-    return toolType === RectangleRoi.toolType;
-};
-
-MeasurementReport.registerTool(RectangleRoi);
-
-export default RectangleRoi;

package/src/adapters/Cornerstone/Segmentation.js

@@ -1,118 +0,0 @@
-import Segmentation_3X from "./Segmentation_3X";
-import Segmentation_4X from "./Segmentation_4X";
-
-const Segmentation = {
-    generateSegmentation,
-    generateToolState,
-    fillSegmentation
-};
-
-export default Segmentation;
-
-/**
- * generateSegmentation - Generates a DICOM Segmentation object given cornerstoneTools data.
- *
- * @param  {object[]} images    An array of the cornerstone image objects.
- * @param  {Object|Object[]} labelmaps3DorBrushData For 4.X: The cornerstone `Labelmap3D` object, or an array of objects.
- *                                                  For 3.X: the BrushData.
- * @param  {number} cornerstoneToolsVersion The cornerstoneTools major version to map against.
- * @returns {Object}
- */
-function generateSegmentation(
-    images,
-    labelmaps3DorBrushData,
-    options = { includeSliceSpacing: true },
-    cornerstoneToolsVersion = 4
-) {
-    if (cornerstoneToolsVersion === 4) {
-        return Segmentation_4X.generateSegmentation(
-            images,
-            labelmaps3DorBrushData,
-            options
-        );
-    }
-
-    if (cornerstoneToolsVersion === 3) {
-        return Segmentation_3X.generateSegmentation(
-            images,
-            labelmaps3DorBrushData,
-            options
-        );
-    }
-
-    console.warn(
-        `No generateSegmentation adapater for cornerstone version ${cornerstoneToolsVersion}, exiting.`
-    );
-}
-
-/**
- * generateToolState - Given a set of cornrstoneTools imageIds and a Segmentation buffer,
- * derive cornerstoneTools toolState and brush metadata.
- *
- * @param  {string[]} imageIds    An array of the imageIds.
- * @param  {ArrayBuffer} arrayBuffer The SEG arrayBuffer.
- * @param {*} metadataProvider
- * @param  {bool} skipOverlapping - skip checks for overlapping segs, default value false.
- * @param  {number} tolerance - default value 1.e-3.
- * @param  {number} cornerstoneToolsVersion - default value 4.
- *
- * @returns {Object}  The toolState and an object from which the
- *                    segment metadata can be derived.
- */
-function generateToolState(
-    imageIds,
-    arrayBuffer,
-    metadataProvider,
-    skipOverlapping = false,
-    tolerance = 1e-3,
-    cornerstoneToolsVersion = 4
-) {
-    if (cornerstoneToolsVersion === 4) {
-        return Segmentation_4X.generateToolState(
-            imageIds,
-            arrayBuffer,
-            metadataProvider,
-            skipOverlapping,
-            tolerance
-        );
-    }
-
-    if (cornerstoneToolsVersion === 3) {
-        return Segmentation_3X.generateToolState(
-            imageIds,
-            arrayBuffer,
-            metadataProvider
-        );
-    }
-
-    console.warn(
-        `No generateToolState adapater for cornerstone version ${cornerstoneToolsVersion}, exiting.`
-    );
-}
-
-/**
- * fillSegmentation - Fills a derived segmentation dataset with cornerstoneTools `LabelMap3D` data.
- *
- * @param  {object[]} segmentation An empty segmentation derived dataset.
- * @param  {Object|Object[]} inputLabelmaps3D The cornerstone `Labelmap3D` object, or an array of objects.
- * @param  {Object} userOptions Options object to override default options.
- * @returns {Blob}           description
- */
-function fillSegmentation(
-    segmentation,
-    inputLabelmaps3D,
-    options = { includeSliceSpacing: true },
-    cornerstoneToolsVersion = 4
-) {
-    if (cornerstoneToolsVersion === 4) {
-        return Segmentation_4X.fillSegmentation(
-            segmentation,
-            inputLabelmaps3D,
-            options
-        );
-    }
-
-    console.warn(
-        `No generateSegmentation adapater for cornerstone version ${cornerstoneToolsVersion}, exiting.`
-    );
-}