npm - @codeyam/codeyam-cli - Versions diffs - 0.1.0-staging.1 → 0.1.0-staging.596f0eb - Mend

@codeyam/codeyam-cli 0.1.0-staging.1 → 0.1.0-staging.596f0eb

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Files changed (1821) hide show

package/codeyam-cli/src/utils/__tests__/setupClaudeCodeSettings.test.js.map CHANGED Viewed

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package/codeyam-cli/src/utils/analysisRunner.js CHANGED Viewed

@@ -4,9 +4,11 @@ import { ProgressReporter, withoutSpinner } from "./progress.js";
 import { createFakeCommit, requireBranchAndProject, testEnvironment, } from "./database.js";
 import { startBackgroundServer } from "./backgroundServer.js";
 import { isServerRunning } from "./serverState.js";
-import { loadEntities, updateCommitMetadata } from "../../../packages/supabase/index.js";
+import { updateCommitMetadata } from "../../../packages/database/index.js";
+import { getCurrentEntities } from "../webserver/app/lib/database.js";
 import { pushNewCommitRun } from "../../../packages/utils/server.js";
 import { initializeAIServiceMode } from "../../../packages/ai/index.js";
+import { getLogPath } from "./sandbox.js";
 export async function runAnalysisForEntities(options) {
     const { projectRoot, filePaths, entityNames, progress, context, scenarioCount, onlyDataStructure, } = options;
     const reporter = progress || new ProgressReporter(false);
@@ -69,12 +71,12 @@ export async function runAnalysisForEntities(options) {
     let entityShas = [];
     if (entityNames && entityNames.length > 0) {
         reporter.start(`Looking up ${entityNames.length} entities...`);
-        const entities = await loadEntities({
+        const entities = await getCurrentEntities({
             projectId: project.id,
             names: entityNames,
             filePaths,
         });
-        if (!entities || entities.length === 0) {
+        if (entities.length === 0) {
             reporter.fail(`No entities found with names: ${entityNames.join(', ')}`);
             throw new Error(`Entities not found: ${entityNames.join(', ')}`);
         }
@@ -135,7 +137,7 @@ export async function runAnalysisForEntities(options) {
     reporter.succeed(`Job queued (${jobId.substring(0, 8)})`);
     reporter.start('Running analysis and capture...');
     // Set up log file streaming for progress updates
-    const logPath = `/tmp/codeyam/local-dev/${projectSlug}/codeyam/log.txt`;
+    const logPath = getLogPath(projectSlug);
     let lastLogPosition = 0;
     let lastProgressUpdate = 0;
     const collectedErrors = [];

package/codeyam-cli/src/utils/analysisRunner.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/codeyam-cli/src/utils/analyzer.js CHANGED Viewed

@@ -4,6 +4,7 @@ import * as path from 'path';
 import { runLocalAnalyzerCapture, runLocalAnalyzerCaptureWithProcess, runLocalAnalyzerStart, runLocalAnalyzerStartWithProcess, } from "../../../background/src/lib/local/createLocalAnalyzer.js";
 import { rsyncCopy } from "../../../packages/utils/server.js";
 import { fileURLToPath } from 'url';
+import { getAnalyzerPath as getSandboxAnalyzerPath, getProjectPath as getSandboxProjectPath, resetSandbox, } from "./sandbox.js";
 const __dirname = path.dirname(fileURLToPath(import.meta.url));
 /**
  * Utilities for managing the pre-built analyzer template
@@ -41,15 +42,17 @@ export function getAnalyzerTemplatePath() {
 }
 /**
  * Get the analyzer path for a specific project
+ * @deprecated Use getAnalyzerPath from "./sandbox.js" instead
  */
 export function getAnalyzerPath(projectSlug) {
-    return `/tmp/codeyam/local-dev/${projectSlug}/codeyam`;
+    return getSandboxAnalyzerPath(projectSlug);
 }
 /**
  * Get the project cache path for a specific project
+ * @deprecated Use getProjectPath from "./sandbox.js" instead
  */
 export function getProjectPath(projectSlug) {
-    return `/tmp/codeyam/local-dev/${projectSlug}/project`;
+    return getSandboxProjectPath(projectSlug);
 }
 /**
  * Check if analyzer exists for a project
@@ -227,4 +230,23 @@ export async function cleanupAnalyzer(projectSlug) {
         await fs.rm(analyzerPath, { recursive: true });
     }
 }
+/**
+ * Reset the project cache to force a fresh sync on next analysis.
+ * This removes the .sync-metadata.json file which triggers a full rsync,
+ * and removes any __codeyamMocks__ directory that may have been created
+ * by setup-sandbox.
+ *
+ * This is important because:
+ * 1. setup-sandbox applies mocks to the tmp project
+ * 2. Those mocks modify tsconfig paths to intercept imports
+ * 3. TypeScript then resolves to mock files instead of original source files
+ * 4. Analysis fails because original source files aren't in the TypeScript program
+ *
+ * By resetting the project, we ensure analysis runs against the clean source.
+ *
+ * @deprecated Use resetSandbox from "./sandbox.js" instead for more comprehensive cleanup
+ */
+export async function resetProject(projectSlug) {
+    await resetSandbox(projectSlug, { killProcesses: false });
+}
 //# sourceMappingURL=analyzer.js.map

package/codeyam-cli/src/utils/analyzer.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/codeyam-cli/src/utils/backgroundServer.js CHANGED Viewed

@@ -1,9 +1,8 @@
 import { spawn } from 'child_process';
 import * as path from 'path';
 import * as fs from 'fs';
-import * as os from 'os';
 import { fileURLToPath } from 'url';
-import { saveServerState, isServerRunning } from "./serverState.js";
+import { isServerRunning, saveServerState } from "./serverState.js";
 const __filename = fileURLToPath(import.meta.url);
 const __dirname = path.dirname(__filename);
 export async function startBackgroundServer(options) {
@@ -17,7 +16,7 @@ export async function startBackgroundServer(options) {
     // Start new background server process
     const serverScriptPath = path.join(__dirname, '..', 'webserver', 'backgroundServer.js');
     // Create log files for debugging
-    const logDir = path.join(os.tmpdir(), 'codeyam-logs');
+    const logDir = path.join(rootPath, '.codeyam', 'logs');
     if (!fs.existsSync(logDir)) {
         fs.mkdirSync(logDir, { recursive: true });
     }
@@ -37,8 +36,29 @@ export async function startBackgroundServer(options) {
     });
     // Detach the child process so it can run independently
     child.unref();
-    // Wait a moment for the server to start
-    await new Promise((resolve) => setTimeout(resolve, 1000));
+    // Poll health endpoint until server is ready (includes FileWatcher initial sync)
+    // This replaces the old arbitrary 1-second wait with actual readiness detection
+    const healthUrl = `${url}/api/health`;
+    const maxWaitMs = 60000; // 60 second timeout (initial sync can take time for large projects)
+    const pollIntervalMs = 200;
+    const startTime = Date.now();
+    while (Date.now() - startTime < maxWaitMs) {
+        try {
+            const response = await fetch(healthUrl);
+            if (response.ok) {
+                // Server is ready - health endpoint only available after full initialization
+                break;
+            }
+        }
+        catch {
+            // Connection refused or other error - server not ready yet
+        }
+        await new Promise((resolve) => setTimeout(resolve, pollIntervalMs));
+    }
+    // Check if we timed out
+    if (Date.now() - startTime >= maxWaitMs) {
+        console.warn(`[BackgroundServer] Warning: Server did not become ready within ${maxWaitMs / 1000}s`);
+    }
     // Save server state
     const serverState = {
         pid: child.pid,

package/codeyam-cli/src/utils/backgroundServer.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/codeyam-cli/src/utils/changeDetection.js CHANGED Viewed

@@ -1,5 +1,5 @@
 import { ensureLocalBranch } from "./database.js";
-import { loadEntities, loadProject } from "../../../packages/supabase/index.js";
+import { loadEntities, loadProject } from "../../../packages/database/index.js";
 import { ProjectAnalyzer } from "../../../packages/analyze/index.js";
 import getFilesWithEntitiesFromRepo from "../../../background/src/lib/virtualized/project/getFilesWithEntitiesFromRepo.js";
 /**

package/codeyam-cli/src/utils/cleanupAnalysisFiles.js CHANGED Viewed

@@ -59,7 +59,7 @@ export function deleteAnalysisFiles(projectSlug, analysis) {
         try {
             if (fs.existsSync(analysisScreenshotsDir)) {
                 // Try to remove directory (will only succeed if empty)
-                fs.rmdirSync(analysisScreenshotsDir, { recursive: true });
+                fs.rmSync(analysisScreenshotsDir, { recursive: true });
                 console.log(`[CleanupFiles] Deleted analysis screenshots directory: ${analysisScreenshotsDir}`);
             }
         }
@@ -68,7 +68,7 @@ export function deleteAnalysisFiles(projectSlug, analysis) {
         }
         try {
             if (fs.existsSync(analysisStaticDir)) {
-                fs.rmdirSync(analysisStaticDir, { recursive: true });
+                fs.rmSync(analysisStaticDir, { recursive: true });
                 console.log(`[CleanupFiles] Deleted analysis static directory: ${analysisStaticDir}`);
             }
         }

package/codeyam-cli/src/utils/cleanupAnalysisFiles.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/codeyam-cli/src/utils/database.js CHANGED Viewed

@@ -1,5 +1,5 @@
 import { setupSecrets } from "./secrets.js";
-import { generateSha, loadBranches, loadProject, upsertBranches, upsertCommits, upsertProjects, } from "../../../packages/supabase/index.js";
+import { generateSha, loadBranches, loadProject, upsertBranches, upsertCommits, upsertProjects, } from "../../../packages/database/index.js";
 import { randomUUID } from 'crypto';
 import path from 'path';
 import { getProjectRoot } from "../state.js";

package/codeyam-cli/src/utils/entityCache.js CHANGED Viewed

@@ -1,4 +1,4 @@
-import { loadEntities, loadAnalyses } from "../../../packages/supabase/index.js";
+import { loadEntities, loadAnalyses } from "../../../packages/database/index.js";
 /**
  * Cache for entities and analyses to reduce database queries and memory usage
  * Features:

package/codeyam-cli/src/utils/entityMetadata.js CHANGED Viewed

@@ -1,5 +1,5 @@
 import { getBatchFileMetadataForAllFiles } from "./fileMetadata.js";
-import { upsertEntities } from "../../../packages/supabase/index.js";
+import { upsertEntities } from "../../../packages/database/index.js";
 /**
  * Populate editedAt and isUncommitted metadata for entities in files
  * This is used during CLI initialization and when detecting changes

package/codeyam-cli/src/utils/entityVersioning.js CHANGED Viewed

@@ -1,4 +1,4 @@
-import { loadEntities } from "../../../packages/supabase/index.js";
+import { loadEntities } from "../../../packages/database/index.js";
 /**
  * Entity states based on commit status and simulation availability
  */

package/codeyam-cli/src/utils/fileWatcher.js CHANGED Viewed

@@ -1,7 +1,7 @@
 import fs from 'fs';
 import path from 'path';
 import ts from 'typescript';
-import { upsertEntities, upsertEntityBranches, loadEntities, loadProject, deleteEntities, generateSha, loadAnalyses, loadFilePaths, } from "../../../packages/supabase/index.js";
+import { upsertEntities, upsertEntityBranches, loadEntities, loadProject, deleteEntities, generateSha, loadAnalyses, loadFilePaths, } from "../../../packages/database/index.js";
 import { getEntityMetadata, getUncommittedFiles, getEntityLineRange, getFileDiffContext, isEntityUncommittedWithContext, } from "./fileMetadata.js";
 import { ProjectAnalyzer, getAllEntityNodes } from "../../../packages/analyze/index.js";
 import getFilesWithEntitiesFromRepo from "../../../background/src/lib/virtualized/project/getFilesWithEntitiesFromRepo.js";
@@ -9,7 +9,7 @@ import createEntitiesAndSortFiles from "../../../background/src/lib/virtualized/
 import { populateEntityMetadata } from "./entityMetadata.js";
 import { getLatestCommittedVersion, shouldCreateNewVersion, } from "./entityVersioning.js";
 import { deleteAnalysisFiles } from "./cleanupAnalysisFiles.js";
-import { loadProject as loadProjectWithSlug } from "../../../packages/supabase/index.js";
+import { loadProject as loadProjectWithSlug } from "../../../packages/database/index.js";
 import { loadGitignorePatterns, shouldIgnorePath } from "./pathIgnoring.js";
 import { EntityCache } from "./entityCache.js";
 import { FolderBurstDetector } from "./folderBurstDetector.js";
@@ -82,6 +82,9 @@ export class FileWatcher {
         this.gitignorePatterns = loadGitignorePatterns(this.options.projectRootPath);
         console.log(`[FileWatcher] Loaded ${this.gitignorePatterns.length} gitignore patterns`);
         console.log(`[FileWatcher] Custom ignore patterns: ${this.customIgnorePatterns.length}`);
+        // Perform initial sync BEFORE setting up watchers
+        // This ensures DB reflects current filesystem state
+        await this.performInitialSync();
         for (const watchPath of pathsToWatch) {
             const fullPath = path.isAbsolute(watchPath)
                 ? watchPath
@@ -144,6 +147,67 @@ export class FileWatcher {
         }, 300000);
         console.log('[FileWatcher] Started with optimizations (caching, burst detection, memory cleanup)');
     }
+    /**
+     * Perform initial sync of all uncommitted files on startup.
+     * This ensures the database reflects the current filesystem state before we start watching.
+     * Handles:
+     * 1. Files that changed while the server was off (compares SHAs, creates new versions)
+     * 2. Files that were committed while the server was off (clears isUncommitted flag)
+     * 3. Files that were deleted and committed (removes entities)
+     */
+    async performInitialSync() {
+        console.log('[FileWatcher] Performing initial sync of uncommitted files...');
+        // Get current uncommitted files from git
+        const uncommittedFiles = getUncommittedFiles(this.options.projectRootPath);
+        const uncommittedTsFiles = Array.from(uncommittedFiles).filter((f) => /\.(ts|tsx|js|jsx)$/.test(f) && !this.shouldIgnoreFilePath(f));
+        console.log(`[FileWatcher] Found ${uncommittedTsFiles.length} uncommitted TypeScript/JavaScript files`);
+        // Sync SHA/code for uncommitted files using the same logic as runtime file changes
+        if (uncommittedTsFiles.length > 0) {
+            console.log(`[FileWatcher] Syncing ${uncommittedTsFiles.length} uncommitted files...`);
+            await this.handleFileUpdatesBatch(uncommittedTsFiles);
+        }
+        // Load all entities to find ones that need metadata updates
+        const allEntities = await loadEntities({
+            projectId: this.options.projectId,
+            branchId: this.options.branchId,
+        });
+        if (!allEntities || allEntities.length === 0) {
+            console.log('[FileWatcher] No entities in database, initial sync complete');
+            return;
+        }
+        // Find entities that were marked uncommitted but are now committed
+        // (handles commits that happened while the server was off)
+        const nowCommitted = allEntities.filter((e) => e.metadata?.isUncommitted &&
+            !e.metadata?.isSuperseded &&
+            !uncommittedFiles.has(e.filePath));
+        if (nowCommitted.length > 0) {
+            console.log(`[FileWatcher] Clearing isUncommitted from ${nowCommitted.length} now-committed entities`);
+            const updated = nowCommitted.map((e) => ({
+                ...e,
+                metadata: {
+                    ...e.metadata,
+                    isUncommitted: false,
+                },
+            }));
+            await upsertEntities(updated);
+            await upsertEntityBranches(updated.map((e) => ({
+                entitySha: e.sha,
+                branchId: this.options.branchId,
+                active: true,
+            })));
+        }
+        // Find entities that were marked isBeingDeleted and the deletion was committed
+        // (file no longer exists and is not in uncommitted list)
+        const beingDeletedAndCommitted = allEntities.filter((e) => e.metadata?.isBeingDeleted && !uncommittedFiles.has(e.filePath));
+        if (beingDeletedAndCommitted.length > 0) {
+            console.log(`[FileWatcher] Deleting ${beingDeletedAndCommitted.length} entities that were deleted and committed`);
+            await deleteEntities({
+                projectId: this.options.projectId,
+                shas: beingDeletedAndCommitted.map((e) => e.sha),
+            });
+        }
+        console.log('[FileWatcher] Initial sync complete');
+    }
     /**
      * Stop watching files
      */
@@ -608,6 +672,9 @@ export class FileWatcher {
                                 analyses: primaryVersion.analyses || [],
                                 metadata: {
                                     ...primaryVersion.metadata,
+                                    // Clear isolatedDataStructure - it was computed for the old code
+                                    // and must be recomputed for the new code during analysis
+                                    isolatedDataStructure: undefined,
                                     editedAt,
                                     isUncommitted: !isRevertToCommitted,
                                     isBeingDeleted: false,
@@ -1061,6 +1128,9 @@ export class FileWatcher {
                                 analyses: entity.analyses || [], // Inherit analyses for display
                                 metadata: {
                                     ...entity.metadata,
+                                    // Clear isolatedDataStructure - it was computed for the old code
+                                    // and must be recomputed for the new code during analysis
+                                    isolatedDataStructure: undefined,
                                     editedAt: entityMetadata.editedAt,
                                     // If code SHA changed, determine uncommitted status by comparing to committed version
                                     // Don't rely on git check due to race condition
@@ -1494,13 +1564,13 @@ export class FileWatcher {
     }
 }
 /**
- * Create and start a file watcher
+ * Create and start a file watcher.
+ * Returns a promise that resolves when the watcher is fully initialized,
+ * including the initial sync of all uncommitted files.
  */
-export function createFileWatcher(options) {
+export async function createFileWatcher(options) {
     const watcher = new FileWatcher(options);
-    watcher.start().catch((error) => {
-        console.log('Failed to start file watcher:', error);
-    });
+    await watcher.start();
     return watcher;
 }
 //# sourceMappingURL=fileWatcher.js.map