@cleocode/core 2026.9.20 → 2026.9.22

package/dist/nexus/git-state.js.map

@@ -0,0 +1 @@
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package/dist/nexus/graph-manifest.d.ts

@@ -21,7 +21,10 @@ export type GraphManifestEntry = [path: string, size: number, mtimeMs: number, h
 export interface GraphFileManifest {
     /** Generation the manifest describes. */
     generation: string | null;
-    /** Canonical root the paths are relative to. */
+    /**
+     * Absolute source root the paths are relative to. In memory it is absolute;
+     * in `_nexus_meta` it is stored relative to the project root (T12474).
+     */
     sourceRoot: string;
     /** Explicitly included nested repositories, needed to walk the same tree. */
     includedRepositories: string[];
@@ -55,10 +58,15 @@ interface ObservedFile {
 export declare function buildFileManifest(assessment: Pick<GraphIndexAssessment, 'generation' | 'sourceRoot' | 'includedRepositories' | 'assessedAt'>, files: readonly ObservedFile[]): GraphFileManifest;
 /**
  * Write the manifest; call inside the transaction that publishes its generation.
+ *
+ * The source root is stored relative to `projectRoot` (T12474), so the record
+ * stays valid after the project moves.
+ *
  * @param tx - Open transaction on the project graph database.
  * @param manifest - Manifest of the generation being committed.
+ * @param projectRoot - Canonical project root; when omitted the root is stored as given.
  */
-export declare function writeFileManifest(tx: NodeSQLiteDatabase, manifest: GraphFileManifest): void;
+export declare function writeFileManifest(tx: NodeSQLiteDatabase, manifest: GraphFileManifest, projectRoot?: string): void;
 /**
  * Remove the manifest; call when a generation is published without one, so a
  * stale manifest can never describe a different generation.
@@ -66,12 +74,20 @@ export declare function writeFileManifest(tx: NodeSQLiteDatabase, manifest: Grap
  */
 export declare function clearFileManifest(tx: NodeSQLiteDatabase): void;
 /**
- * Read the manifest of the committed generation.
+ * Read the manifest of the committed generation, its source root resolved
+ * against the live project root.
+ *
+ * A manifest written before T12474 holds the absolute root of the machine that
+ * analyzed it; when that root lies inside the project root recorded with the
+ * same generation, it is rebased onto the live root, so a moved project walks
+ * its own tree instead of a path that no longer exists.
+ *
  * @param db - Project graph database.
+ * @param projectRoot - Live project root the database was opened for.
  * @returns The manifest, or `null` when the generation predates manifests.
  * @throws When a stored manifest is malformed.
  */
-export declare function readFileManifest(db: NodeSQLiteDatabase): GraphFileManifest | null;
+export declare function readFileManifest(db: NodeSQLiteDatabase, projectRoot: string): GraphFileManifest | null;
 /**
  * Record what the last publishing analysis cost; advisory, used for estimates.
  * @param db - Project graph database.

package/dist/nexus/graph-manifest.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"graph-manifest.d.ts","sourceRoot":"","sources":["../../src/nexus/graph-manifest.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;GAcG;AAGH,OAAO,KAAK,EAAE,oBAAoB,EAAE,oBAAoB,EAAE,MAAM,qBAAqB,CAAC;AAEtF,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,yBAAyB,CAAC;AAUlE,8DAA8D;AAC9D,MAAM,MAAM,kBAAkB,GAAG,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,CAAC,CAAC;AAE7F,8EAA8E;AAC9E,MAAM,WAAW,iBAAiB;IAChC,yCAAyC;IACzC,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B;;;OAGG;IACH,UAAU,EAAE,MAAM,CAAC;IACnB,6EAA6E;IAC7E,oBAAoB,EAAE,MAAM,EAAE,CAAC;IAC/B,wCAAwC;IACxC,UAAU,EAAE,MAAM,CAAC;IACnB,8CAA8C;IAC9C,KAAK,EAAE,kBAAkB,EAAE,CAAC;CAC7B;AAED,oEAAoE;AACpE,MAAM,WAAW,YAAY;IAC3B,2DAA2D;IAC3D,OAAO,EAAE,oBAAoB,CAAC;IAC9B,qEAAqE;IACrE,UAAU,EAAE,MAAM,CAAC;IACnB,6BAA6B;IAC7B,UAAU,EAAE,MAAM,CAAC;CACpB;AA0BD,iFAAiF;AACjF,UAAU,YAAY;IACpB,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,WAAW,CAAC,EAAE,MAAM,CAAC;CACtB;AAED;;;;;GAKG;AACH,wBAAgB,iBAAiB,CAC/B,UAAU,EAAE,IAAI,CACd,oBAAoB,EACpB,YAAY,GAAG,YAAY,GAAG,sBAAsB,GAAG,YAAY,CACpE,EACD,KAAK,EAAE,SAAS,YAAY,EAAE,GAC7B,iBAAiB,CAanB;AAED;;;;;;;;;GASG;AACH,wBAAgB,iBAAiB,CAC/B,EAAE,EAAE,kBAAkB,EACtB,QAAQ,EAAE,iBAAiB,EAC3B,WAAW,CAAC,EAAE,MAAM,GACnB,IAAI,CAMN;AAED;;;;GAIG;AACH,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,kBAAkB,GAAG,IAAI,CAE9D;AAcD;;;;;;;;;;;;;GAaG;AACH,wBAAgB,gBAAgB,CAC9B,EAAE,EAAE,kBAAkB,EACtB,WAAW,EAAE,MAAM,GAClB,iBAAiB,GAAG,IAAI,CAY1B;AAED;;;;GAIG;AACH,wBAAgB,YAAY,CAAC,EAAE,EAAE,kBAAkB,EAAE,IAAI,EAAE,YAAY,GAAG,IAAI,CAG7E;AAED;;;;GAIG;AACH,wBAAgB,WAAW,CAAC,EAAE,EAAE,kBAAkB,GAAG,YAAY,GAAG,IAAI,CAOvE"}

package/dist/nexus/graph-manifest.js

@@ -13,8 +13,11 @@
  * @task T12316
  * @module nexus/graph-manifest
  */
+import { isAbsolute } from 'node:path';
 import { sql } from 'drizzle-orm';
 import { z } from 'zod';
+import { ASSESSMENT_KEY } from './assessment-store.js';
+import { canonicalProjectRoot, fromStoredPath, isWithin, toStoredPath } from './stored-roots.js';
 /** `_nexus_meta` key of the compact file manifest. */
 const MANIFEST_KEY = 'graph_file_manifest';
 /** `_nexus_meta` key of the last analysis run summary. */
@@ -63,11 +66,19 @@ export function buildFileManifest(assessment, files) {
 }
 /**
  * Write the manifest; call inside the transaction that publishes its generation.
+ *
+ * The source root is stored relative to `projectRoot` (T12474), so the record
+ * stays valid after the project moves.
+ *
  * @param tx - Open transaction on the project graph database.
  * @param manifest - Manifest of the generation being committed.
+ * @param projectRoot - Canonical project root; when omitted the root is stored as given.
  */
-export function writeFileManifest(tx, manifest) {
-    tx.run(sql `INSERT INTO main._nexus_meta (key, value) VALUES (${MANIFEST_KEY}, ${JSON.stringify(manifest)})
+export function writeFileManifest(tx, manifest, projectRoot) {
+    const stored = projectRoot
+        ? { ...manifest, sourceRoot: toStoredPath(projectRoot, manifest.sourceRoot) }
+        : manifest;
+    tx.run(sql `INSERT INTO main._nexus_meta (key, value) VALUES (${MANIFEST_KEY}, ${JSON.stringify(stored)})
     ON CONFLICT(key) DO UPDATE SET value = excluded.value, updated_at = strftime('%s', 'now')`);
 }
 /**
@@ -79,16 +90,40 @@ export function clearFileManifest(tx) {
     tx.run(sql `DELETE FROM main._nexus_meta WHERE key = ${MANIFEST_KEY}`);
 }
 /**
- * Read the manifest of the committed generation.
+ * Project root a legacy absolute record was written under, read from the
+ * assessment published in the same transaction. Only consulted for a legacy
+ * manifest, and only the one JSON field is extracted.
+ */
+function legacyProjectRoot(db) {
+    const value = db.values(sql `SELECT json_extract(value, '$.sourceRoots.projectRoot') FROM main._nexus_meta WHERE key = ${ASSESSMENT_KEY}`)[0]?.[0];
+    return typeof value === 'string' && isAbsolute(value) ? value : undefined;
+}
+/**
+ * Read the manifest of the committed generation, its source root resolved
+ * against the live project root.
+ *
+ * A manifest written before T12474 holds the absolute root of the machine that
+ * analyzed it; when that root lies inside the project root recorded with the
+ * same generation, it is rebased onto the live root, so a moved project walks
+ * its own tree instead of a path that no longer exists.
+ *
  * @param db - Project graph database.
+ * @param projectRoot - Live project root the database was opened for.
  * @returns The manifest, or `null` when the generation predates manifests.
  * @throws When a stored manifest is malformed.
  */
-export function readFileManifest(db) {
+export function readFileManifest(db, projectRoot) {
     const value = db.values(sql `SELECT value FROM main._nexus_meta WHERE key = ${MANIFEST_KEY}`)[0]?.[0];
     if (typeof value !== 'string')
         return null;
-    return manifestSchema.parse(JSON.parse(value));
+    const stored = manifestSchema.parse(JSON.parse(value));
+    const base = canonicalProjectRoot(projectRoot);
+    if (!isAbsolute(stored.sourceRoot))
+        return { ...stored, sourceRoot: fromStoredPath(base, stored.sourceRoot) };
+    const legacyRoot = legacyProjectRoot(db);
+    if (!legacyRoot || !isWithin(legacyRoot, stored.sourceRoot))
+        return stored;
+    return { ...stored, sourceRoot: fromStoredPath(base, stored.sourceRoot, legacyRoot) };
 }
 /**
  * Record what the last publishing analysis cost; advisory, used for estimates.

package/dist/nexus/graph-manifest.js.map

@@ -1 +1 @@
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+{"version":3,"file":"graph-manifest.js","sourceRoot":"","sources":["../../src/nexus/graph-manifest.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;GAcG;AAEH,OAAO,EAAE,UAAU,EAAE,MAAM,WAAW,CAAC;AAEvC,OAAO,EAAE,GAAG,EAAE,MAAM,aAAa,CAAC;AAElC,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AACxB,OAAO,EAAE,cAAc,EAAE,MAAM,uBAAuB,CAAC;AACvD,OAAO,EAAE,oBAAoB,EAAE,cAAc,EAAE,QAAQ,EAAE,YAAY,EAAE,MAAM,mBAAmB,CAAC;AAEjG,sDAAsD;AACtD,MAAM,YAAY,GAAG,qBAAqB,CAAC;AAC3C,0DAA0D;AAC1D,MAAM,eAAe,GAAG,mBAAmB,CAAC;AAgC5C,MAAM,cAAc,GAAG,CAAC,CAAC,MAAM,CAAC;IAC9B,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE;IACjC,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE;IACtB,oBAAoB,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;IACzC,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE;IACtB,KAAK,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,CAAC;CAC1E,CAAC,CAAC;AAEH,MAAM,aAAa,GAAG,CAAC,CAAC,MAAM,CAAC;IAC7B,OAAO,EAAE,CAAC,CAAC,MAAM,CAAC;QAChB,IAAI,EAAE,CAAC,CAAC,IAAI,CAAC,CAAC,aAAa,EAAE,MAAM,EAAE,WAAW,CAAC,CAAC;QAClD,MAAM,EAAE,CAAC,CAAC,MAAM,EAAE;QAClB,YAAY,EAAE,CAAC,CAAC,MAAM,EAAE;QACxB,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE;QACtB,YAAY,EAAE,CAAC,CAAC,MAAM,EAAE;QACxB,WAAW,EAAE,CAAC,CAAC,MAAM,EAAE;QACvB,WAAW,EAAE,CAAC,CAAC,MAAM,EAAE;QACvB,aAAa,EAAE,CAAC,CAAC,MAAM,EAAE;QACzB,OAAO,EAAE,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC;KAC1C,CAAC;IACF,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE;IACtB,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE;CACvB,CAAC,CAAC;AAUH;;;;;GAKG;AACH,MAAM,UAAU,iBAAiB,CAC/B,UAGC,EACD,KAA8B;IAE9B,MAAM,OAAO,GAAyB,EAAE,CAAC;IACzC,KAAK,MAAM,IAAI,IAAI,KAAK,EAAE,CAAC;QACzB,IAAI,IAAI,CAAC,WAAW,IAAI,IAAI,CAAC,IAAI,KAAK,SAAS,IAAI,IAAI,CAAC,OAAO,KAAK,SAAS;YAC3E,OAAO,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE,IAAI,CAAC,OAAO,EAAE,IAAI,CAAC,WAAW,CAAC,CAAC,CAAC;IACzE,CAAC;IACD,OAAO;QACL,UAAU,EAAE,UAAU,CAAC,UAAU,IAAI,IAAI;QACzC,UAAU,EAAE,UAAU,CAAC,UAAU;QACjC,oBAAoB,EAAE,CAAC,GAAG,CAAC,UAAU,CAAC,oBAAoB,IAAI,EAAE,CAAC,CAAC;QAClE,UAAU,EAAE,UAAU,CAAC,UAAU;QACjC,KAAK,EAAE,OAAO;KACf,CAAC;AACJ,CAAC;AAED;;;;;;;;;GASG;AACH,MAAM,UAAU,iBAAiB,CAC/B,EAAsB,EACtB,QAA2B,EAC3B,WAAoB;IAEpB,MAAM,MAAM,GAAsB,WAAW;QAC3C,CAAC,CAAC,EAAE,GAAG,QAAQ,EAAE,UAAU,EAAE,YAAY,CAAC,WAAW,EAAE,QAAQ,CAAC,UAAU,CAAC,EAAE;QAC7E,CAAC,CAAC,QAAQ,CAAC;IACb,EAAE,CAAC,GAAG,CAAC,GAAG,CAAA,qDAAqD,YAAY,KAAK,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC;8FACV,CAAC,CAAC;AAChG,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,iBAAiB,CAAC,EAAsB;IACtD,EAAE,CAAC,GAAG,CAAC,GAAG,CAAA,4CAA4C,YAAY,EAAE,CAAC,CAAC;AACxE,CAAC;AAED;;;;GAIG;AACH,SAAS,iBAAiB,CAAC,EAAsB;IAC/C,MAAM,KAAK,GAAG,EAAE,CAAC,MAAM,CACrB,GAAG,CAAA,6FAA6F,cAAc,EAAE,CACjH,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;IACV,OAAO,OAAO,KAAK,KAAK,QAAQ,IAAI,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,SAAS,CAAC;AAC5E,CAAC;AAED;;;;;;;;;;;;;GAaG;AACH,MAAM,UAAU,gBAAgB,CAC9B,EAAsB,EACtB,WAAmB;IAEnB,MAAM,KAAK,GAAG,EAAE,CAAC,MAAM,CACrB,GAAG,CAAA,kDAAkD,YAAY,EAAE,CACpE,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;IACV,IAAI,OAAO,KAAK,KAAK,QAAQ;QAAE,OAAO,IAAI,CAAC;IAC3C,MAAM,MAAM,GAAG,cAAc,CAAC,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC;IACvD,MAAM,IAAI,GAAG,oBAAoB,CAAC,WAAW,CAAC,CAAC;IAC/C,IAAI,CAAC,UAAU,CAAC,MAAM,CAAC,UAAU,CAAC;QAChC,OAAO,EAAE,GAAG,MAAM,EAAE,UAAU,EAAE,cAAc,CAAC,IAAI,EAAE,MAAM,CAAC,UAAU,CAAC,EAAE,CAAC;IAC5E,MAAM,UAAU,GAAG,iBAAiB,CAAC,EAAE,CAAC,CAAC;IACzC,IAAI,CAAC,UAAU,IAAI,CAAC,QAAQ,CAAC,UAAU,EAAE,MAAM,CAAC,UAAU,CAAC;QAAE,OAAO,MAAM,CAAC;IAC3E,OAAO,EAAE,GAAG,MAAM,EAAE,UAAU,EAAE,cAAc,CAAC,IAAI,EAAE,MAAM,CAAC,UAAU,EAAE,UAAU,CAAC,EAAE,CAAC;AACxF,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,YAAY,CAAC,EAAsB,EAAE,IAAkB;IACrE,EAAE,CAAC,GAAG,CAAC,GAAG,CAAA,qDAAqD,eAAe,KAAK,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC;8FACX,CAAC,CAAC;AAChG,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,WAAW,CAAC,EAAsB;IAChD,MAAM,KAAK,GAAG,EAAE,CAAC,MAAM,CACrB,GAAG,CAAA,kDAAkD,eAAe,EAAE,CACvE,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;IACV,IAAI,OAAO,KAAK,KAAK,QAAQ;QAAE,OAAO,IAAI,CAAC;IAC3C,MAAM,MAAM,GAAG,aAAa,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC;IAC1D,OAAO,MAAM,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC;AAC7C,CAAC"}

package/dist/nexus/identity.d.ts

@@ -1,14 +1,17 @@
 /**
- * Canonical project identity computation (T9149 — W5 N1 Epsilon-unique insight).
+ * Path fingerprints of a project checkout (T9149, demoted by T12470).
  *
- * Addresses the 80,969-row pollution from cross-provider mount-path divergence
- * (e.g. /mnt/projects/cleocode vs /workspace/cleocode both hashing to different
- * base64url(path) IDs for the same repo).
- *
- * `canonicalProjectId` anchors identity to git-root + realpath so container
- * bind-mounts, CI clones, and developer laptops all produce the same ID.
+ * A project is identified ONLY by the id it declares — the tracked
+ * `.cleo/project-id`, then `project-info.json` (ADR-094; see
+ * `readDeclaredProjectIdentity` in `@cleocode/paths`). The values computed here
+ * hash a checkout's LOCATION (git-root realpath + name + remote), so they
+ * change when the project moves. They survive only as alias keys in
+ * `nexus_project_id_aliases`, which keeps ids that older CLEO versions derived
+ * from a path resolvable. Never return one as a project id and never key a
+ * registry row by one. This supersedes the T9149 realpath-fingerprint identity.
  *
  * @task T9149
+ * @task T12470
  * @module nexus/identity
  */
 import type { OperationExecutionContext } from '@cleocode/contracts/jobs';
@@ -21,9 +24,9 @@ export interface ProjectIdentityComponents {
     /** First git remote URL (origin fetch URL, if present). */
     readonly remoteUrl?: string;
 }
-/** Result of canonical ID computation. */
+/** Result of path-fingerprint computation (an alias key, not an identity). */
 export interface CanonicalProjectIdResult {
-    /** The 12-hex-char canonical project ID. */
+    /** The 12-hex-char path fingerprint — an alias key, never a project id. */
     readonly id: string;
     /** The components used to compute the ID. */
     readonly components: ProjectIdentityComponents;
@@ -65,31 +68,73 @@ export declare function findGitRoot(fromPath: string, execution?: OperationExecu
  */
 export declare function findGitRemoteUrl(fromPath: string, execution?: OperationExecutionContext): Promise<string | null>;
 /**
- * Compute the canonical project ID for a given repository path.
+ * Normalise a git remote URL so `git@host:o/r.git` and `https://host/o/r`
+ * compare equal. Returns `null` for empty input.
+ *
+ * @param url - Raw `git remote get-url` output or a stored `remoteUrl`.
+ * @returns A `host/owner/repo` style key, or `null`.
+ *
+ * @example
+ * ```ts
+ * normalizeRemoteUrl('git@github.com:o/r.git'); // 'github.com/o/r'
+ * ```
+ */
+export declare function normalizeRemoteUrl(url: string | null | undefined): string | null;
+/**
+ * Git facts about a checkout, recorded on its location for DISPLAY (T12470).
+ * Never proof: a clone shares both, a bare `git init` can add any remote, and
+ * a root commit can be faked. Moves are proven by the checkout nonce
+ * (`nexus/checkout-nonce.ts`) alone. `null` means unknown.
+ */
+export interface CheckoutEvidence {
+    /** First (parentless) commit of the repository — the lexically smallest when several. */
+    readonly gitRootCommit: string | null;
+    /** Normalised `origin` URL ({@link normalizeRemoteUrl}). */
+    readonly gitRemote: string | null;
+}
+/**
+ * Collect {@link CheckoutEvidence} for a checkout. Never throws for an absent
+ * repository, commit or remote — those fields are `null`.
+ *
+ * @param fromPath - Checkout root.
+ * @param execution - Optional captured caller lifetime.
+ * @returns The evidence.
  *
- * Algorithm:
- *   1. Resolve `repoPath` to its `realpath` (resolves symlinks, normalises mounts).
- *   2. Detect the git root via `git rev-parse --show-toplevel` (falls back to realpath).
- *   3. Read `.cleo/project-info.json` name (optional).
- *   4. Read `git remote get-url origin` (optional).
- *   5. SHA-256 of `<gitRoot>|<projectName>|<remoteUrl>`, first 12 hex chars.
+ * @example
+ * ```ts
+ * const { gitRootCommit, gitRemote } = await collectCheckoutEvidence(root);
+ * ```
+ */
+export declare function collectCheckoutEvidence(fromPath: string, execution?: OperationExecutionContext): Promise<CheckoutEvidence>;
+/**
+ * Compute the path fingerprint `sha256(gitRoot|name|remote)[0:12]` of a checkout.
  *
- * This ensures `/mnt/projects/cleocode` and `/workspace/cleocode` (same git root,
- * same remote) produce the same ID — resolving the 80,969-row pollution vector.
+ * **Alias key only (T12470).** The value depends on where the checkout lives,
+ * so it is recorded in `nexus_project_id_aliases` to keep path-derived ids
+ * from older CLEO versions resolvable — it is never a project's identity.
  *
- * @param repoPath - Absolute path to the project root (may be a symlink or bind-mount).
+ * @param repoPath - Absolute path to the checkout (may be a symlink or bind-mount).
  * @param execution - Optional captured caller lifetime, never renewed between stages.
  * @remarks All started Git children settle before this operation finishes. Context
- * cancellation/deadline failures cannot establish fallback identity or authority.
+ * cancellation/deadline failures cannot establish a fallback fingerprint.
  * @example
  * ```ts
- * const identity = await canonicalProjectId(projectRoot, execution);
+ * const { id: aliasKey } = await projectPathFingerprint(projectRoot, execution);
  * ```
- * @returns The canonical project ID result with components and hash.
+ * @returns The fingerprint with the components it was computed from.
  *
  * @task T9149
+ * @task T12470
+ */
+export declare function projectPathFingerprint(repoPath: string, execution?: OperationExecutionContext): Promise<CanonicalProjectIdResult>;
+/**
+ * Former name of {@link projectPathFingerprint}.
+ *
+ * @deprecated T12470 — the value is a path fingerprint (alias key), not a
+ * project id. Read identity with `readDeclaredProjectIdentity` from
+ * `@cleocode/paths`.
  */
-export declare function canonicalProjectId(repoPath: string, execution?: OperationExecutionContext): Promise<CanonicalProjectIdResult>;
+export declare const canonicalProjectId: typeof projectPathFingerprint;
 /**
  * Compute the legacy base64url(path) ID for a given path.
  *

package/dist/nexus/identity.d.ts.map

@@ -1 +1 @@
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package/dist/nexus/identity.js

@@ -1,14 +1,17 @@
 /**
- * Canonical project identity computation (T9149 — W5 N1 Epsilon-unique insight).
+ * Path fingerprints of a project checkout (T9149, demoted by T12470).
  *
- * Addresses the 80,969-row pollution from cross-provider mount-path divergence
- * (e.g. /mnt/projects/cleocode vs /workspace/cleocode both hashing to different
- * base64url(path) IDs for the same repo).
- *
- * `canonicalProjectId` anchors identity to git-root + realpath so container
- * bind-mounts, CI clones, and developer laptops all produce the same ID.
+ * A project is identified ONLY by the id it declares — the tracked
+ * `.cleo/project-id`, then `project-info.json` (ADR-094; see
+ * `readDeclaredProjectIdentity` in `@cleocode/paths`). The values computed here
+ * hash a checkout's LOCATION (git-root realpath + name + remote), so they
+ * change when the project moves. They survive only as alias keys in
+ * `nexus_project_id_aliases`, which keeps ids that older CLEO versions derived
+ * from a path resolvable. Never return one as a project id and never key a
+ * registry row by one. This supersedes the T9149 realpath-fingerprint identity.
  *
  * @task T9149
+ * @task T12470
  * @module nexus/identity
  */
 import { execFile } from 'node:child_process';
@@ -87,6 +90,77 @@ export async function findGitRemoteUrl(fromPath, execution) {
         return null;
     }
 }
+/**
+ * Normalise a git remote URL so `git@host:o/r.git` and `https://host/o/r`
+ * compare equal. Returns `null` for empty input.
+ *
+ * @param url - Raw `git remote get-url` output or a stored `remoteUrl`.
+ * @returns A `host/owner/repo` style key, or `null`.
+ *
+ * @example
+ * ```ts
+ * normalizeRemoteUrl('git@github.com:o/r.git'); // 'github.com/o/r'
+ * ```
+ */
+export function normalizeRemoteUrl(url) {
+    if (!url)
+        return null;
+    let key = url.trim();
+    if (!key)
+        return null;
+    key = key.replace(/^[a-z][a-z0-9+.-]*:\/\//i, '');
+    key = key.replace(/^[^@/]+@/, '');
+    key = key.replace(/^([^/:]+):(?!\d+\/)/, '$1/');
+    key = key.replace(/\/+$/, '').replace(/\.git$/i, '');
+    return key.toLowerCase() || null;
+}
+/**
+ * Collect {@link CheckoutEvidence} for a checkout. Never throws for an absent
+ * repository, commit or remote — those fields are `null`.
+ *
+ * @param fromPath - Checkout root.
+ * @param execution - Optional captured caller lifetime.
+ * @returns The evidence.
+ *
+ * @example
+ * ```ts
+ * const { gitRootCommit, gitRemote } = await collectCheckoutEvidence(root);
+ * ```
+ */
+export async function collectCheckoutEvidence(fromPath, execution) {
+    execution?.assertActive();
+    const rootCommit = async () => {
+        try {
+            // --no-replace-objects: `refs/replace` must not be able to fake it.
+            const args = ['--no-replace-objects', 'rev-list', '--max-parents=0', 'HEAD'];
+            const { stdout } = await execFileAsync('git', args, {
+                cwd: resolve(fromPath),
+                signal: execution?.signal,
+                timeout: execution ? Math.max(1, execution.remainingMs()) : undefined,
+                killSignal: 'SIGKILL',
+                maxBuffer: 256 * 1024,
+            });
+            execution?.assertActive();
+            const roots = stdout
+                .split(/\r?\n/)
+                .map((line) => line.trim())
+                .filter((line) => /^[0-9a-f]{40,64}$/.test(line))
+                .sort();
+            return roots[0] ?? null;
+        }
+        catch {
+            execution?.assertActive();
+            return null;
+        }
+    };
+    const results = await Promise.allSettled([rootCommit(), findGitRemoteUrl(fromPath, execution)]);
+    for (const result of results)
+        if (result.status === 'rejected')
+            throw result.reason;
+    const commit = results[0].status === 'fulfilled' ? results[0].value : null;
+    const remote = results[1].status === 'fulfilled' ? results[1].value : null;
+    return { gitRootCommit: commit, gitRemote: normalizeRemoteUrl(remote) };
+}
 // ---------------------------------------------------------------------------
 // Project-info.json name
 // ---------------------------------------------------------------------------
@@ -115,31 +189,26 @@ async function readProjectInfoName(repoRoot, execution) {
 // Canonical ID computation
 // ---------------------------------------------------------------------------
 /**
- * Compute the canonical project ID for a given repository path.
- *
- * Algorithm:
- *   1. Resolve `repoPath` to its `realpath` (resolves symlinks, normalises mounts).
- *   2. Detect the git root via `git rev-parse --show-toplevel` (falls back to realpath).
- *   3. Read `.cleo/project-info.json` name (optional).
- *   4. Read `git remote get-url origin` (optional).
- *   5. SHA-256 of `<gitRoot>|<projectName>|<remoteUrl>`, first 12 hex chars.
+ * Compute the path fingerprint `sha256(gitRoot|name|remote)[0:12]` of a checkout.
  *
- * This ensures `/mnt/projects/cleocode` and `/workspace/cleocode` (same git root,
- * same remote) produce the same ID — resolving the 80,969-row pollution vector.
+ * **Alias key only (T12470).** The value depends on where the checkout lives,
+ * so it is recorded in `nexus_project_id_aliases` to keep path-derived ids
+ * from older CLEO versions resolvable — it is never a project's identity.
  *
- * @param repoPath - Absolute path to the project root (may be a symlink or bind-mount).
+ * @param repoPath - Absolute path to the checkout (may be a symlink or bind-mount).
  * @param execution - Optional captured caller lifetime, never renewed between stages.
  * @remarks All started Git children settle before this operation finishes. Context
- * cancellation/deadline failures cannot establish fallback identity or authority.
+ * cancellation/deadline failures cannot establish a fallback fingerprint.
  * @example
  * ```ts
- * const identity = await canonicalProjectId(projectRoot, execution);
+ * const { id: aliasKey } = await projectPathFingerprint(projectRoot, execution);
  * ```
- * @returns The canonical project ID result with components and hash.
+ * @returns The fingerprint with the components it was computed from.
  *
  * @task T9149
+ * @task T12470
  */
-export async function canonicalProjectId(repoPath, execution) {
+export async function projectPathFingerprint(repoPath, execution) {
     execution?.assertActive();
     const realRepoPath = resolve(repoPath);
     // Await every owned child even when a sibling fails, so completion does not
@@ -167,6 +236,14 @@ export async function canonicalProjectId(repoPath, execution) {
         },
     };
 }
+/**
+ * Former name of {@link projectPathFingerprint}.
+ *
+ * @deprecated T12470 — the value is a path fingerprint (alias key), not a
+ * project id. Read identity with `readDeclaredProjectIdentity` from
+ * `@cleocode/paths`.
+ */
+export const canonicalProjectId = projectPathFingerprint;
 // ---------------------------------------------------------------------------
 // Legacy alias migration
 // ---------------------------------------------------------------------------

package/dist/nexus/identity.js.map

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package/dist/nexus/index.d.ts

@@ -12,12 +12,14 @@ export { nexusConduitScan, nexusContractsLinkTasks, nexusContractsShow, nexusCon
 export { getProjectClusters, type NexusClustersResult, type NexusCommunityEntry, nexusClusters, } from './clusters.js';
 export { getSymbolContext, type NexusContextNode, type NexusContextOptions, type NexusContextProcess, type NexusContextRelation, type NexusContextResult, type NexusSourceContent, nexusContext, } from './context.js';
 export { type BlockingAnalysisResult, blockingAnalysis, buildGlobalGraph, type CriticalPathResult, criticalPath, type DepsEntry, type DepsResult, invalidateGraphCache, type NexusGlobalGraph, type NexusGraphEdge, type NexusGraphNode, nexusBlockers, nexusCriticalPath, nexusDeps, nexusDepsQuery, nexusGraph, nexusOrphans, type OrphanEntry, orphanDetection, resolveCrossDeps, } from './deps.js';
+export { DEVICE_HEARTBEAT_INTERVAL_MS, DEVICE_HEARTBEAT_STAMP, type DeviceFacts, type DeviceHeartbeatOutcome, type DeviceStartupHeartbeatOutcome, heartbeatThisDevice, listNexusDevices, recordDeviceHeartbeat, } from './devices.js';
 export { diffNexusIndex, type NexusDiffHealth, type NexusDiffOptions, type NexusDiffResult, nexusDiff, } from './diff.js';
 export { discoverRelated, extractKeywords, nexusDiscover, nexusSearch, searchAcrossProjects, } from './discover.js';
 export { getProjectFlows, type NexusFlowEntry, type NexusFlowsResult, nexusFlows, } from './flows.js';
 export { escapeXml, generateGexf, hexToRgb } from './gexf-export.js';
+export { GIT_STATE_DEFAULTS, type GitProbeTarget, type GitStateProbeOptions, isRemoteStale, listGitStates, listLocalProbeTargets, parsePorcelainV2Status, probeGitState, probeGitStates, recordGitStates, runProjectsGitStatus, } from './git-state.js';
 export { generateProjectHash } from './hash.js';
-export { type CanonicalProjectIdResult, canonicalProjectId, computeLegacyAliases, findGitRemoteUrl, findGitRoot, legacyProjectId, type ProjectIdentityComponents, } from './identity.js';
+export { type CanonicalProjectIdResult, canonicalProjectId, computeLegacyAliases, findGitRemoteUrl, findGitRoot, legacyProjectId, type ProjectIdentityComponents, projectPathFingerprint, } from './identity.js';
 export { getSymbolImpact, type NexusImpactLayer, type NexusImpactNode, type NexusImpactOptions, type NexusImpactResult, type NexusRiskLevel, nexusImpact, } from './impact.js';
 export { nexusBrainAnchors, nexusFullContext, nexusImpactFull, nexusTaskFootprint, nexusWhy, } from './living-brain.js';
 export type { nexusCoreOps } from './ops.js';
@@ -25,7 +27,8 @@ export { canExecute, canRead, canWrite, checkPermission, checkPermissionDetail,
 export { type CleanProjectsOptions, type CleanProjectsResult, cleanProjects, InvalidPatternError, NoCriteriaError, nexusProjectsClean, } from './projects-clean.js';
 export { getDevice, nexusProjectsScan, type ProjectsScanOptions, type ProjectsScanResult, type ScanAutoRegisterError, scanForProjects, walkForCleo, } from './projects-scan.js';
 export { getCurrentProject, getProjectFromQuery, type NexusParsedQuery, type NexusResolvedTask, nexusResolve, nexusTopEntries, parseQuery, resolveProjectPath, resolveTask, validateSyntax, } from './query.js';
-export { getNexusCacheDir, getNexusHome, type NexusHealthStatus, type NexusPermissionLevel, type NexusProject, type NexusProjectStats, type NexusRegistryFile, nexusGetProject, nexusInit, nexusInitialize, nexusList, nexusListProjects, nexusMoveProject, nexusProjectExists, nexusProjectsList, nexusProjectsRegister, nexusProjectsRemove, nexusReconcile, nexusReconcileProject, nexusRegister, nexusRegisterProject, nexusRenameProject, nexusShowProject, nexusStatus, nexusSync, nexusSyncAll, nexusSyncProject, nexusUnregister, nexusUnregisterProject, nexusUpdateIndexStats, readRegistry, readRegistryRequired, resetNexusDbState, } from './registry.js';
+export { getNexusCacheDir, getNexusHome, type NexusHealthStatus, type NexusPermissionLevel, type NexusProject, NexusProjectAmbiguityError, type NexusProjectStats, type NexusRegistryFile, nexusGetProject, nexusInit, nexusInitialize, nexusList, nexusListProjects, nexusMoveProject, nexusProjectExists, nexusProjectsList, nexusProjectsRegister, nexusProjectsRemove, nexusProjectsStatus, nexusReconcile, nexusReconcileProject, nexusRegister, nexusRegisterProject, nexusRenameProject, nexusShowProject, nexusStatus, nexusSync, nexusSyncAll, nexusSyncProject, nexusUnregister, nexusUnregisterProject, nexusUpdateIndexStats, readRegistry, readRegistryRequired, resetNexusDbState, } from './registry.js';
+export { listRegistryParentRoots, parentRootsOf } from './registry-roots.js';
 export { getSharingStatus, nexusShareStatus, type SharingStatus, syncGitignore, } from './sharing/index.js';
 export type { SigilCard, SigilInput } from './sigil.js';
 export { getSigil, listSigils, nexusSigilList, upsertSigil, } from './sigil.js';

package/dist/nexus/index.d.ts.map

@@ -1 +1 @@
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