@cleocode/core 2026.9.19 → 2026.9.21

package/dist/nexus/assessment-store.d.ts

@@ -78,9 +78,21 @@ export declare function assessmentSummary(assessment: GraphIndexAssessment): Gra
  *   the stored list of that same generation.
  * - An assessment with neither removes any stale list.
  *
+ * Root paths are stored relative to the recorded project root (T12474); read
+ * them back through `readKnowledgeIndexAssessment`, which resolves them
+ * against the live project root.
+ *
  * @param tx - Graph database handle or open transaction.
- * @param assessment - Assessment to persist.
- * @returns The summary as written.
+ * @param assessment - Assessment to persist, with absolute in-memory paths.
+ * @returns The summary written, in its in-memory (absolute-path) form.
  */
 export declare function writeAssessment(tx: Pick<NodeSQLiteDatabase, 'run'>, assessment: GraphIndexAssessment): GraphIndexAssessment;
+/**
+ * Whether the stored assessment still holds absolute root paths — the form
+ * written before T12474. Extracts only the two root fields.
+ *
+ * @param db - Graph database handle.
+ * @returns `true` when a legacy absolute record should be rewritten portably.
+ */
+export declare function storedAssessmentHasAbsoluteRoots(db: Pick<NodeSQLiteDatabase, 'values'>): boolean;
 //# sourceMappingURL=assessment-store.d.ts.map

package/dist/nexus/assessment-store.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"assessment-store.d.ts","sourceRoot":"","sources":["../../src/nexus/assessment-store.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;GA0BG;AAGH,OAAO,KAAK,EAAE,oBAAoB,EAAE,yBAAyB,EAAE,MAAM,qBAAqB,CAAC;AAE3F,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,yBAAyB,CAAC;AAElE,mDAAmD;AACnD,eAAO,MAAM,cAAc,qBAAqB,CAAC;AAEjD,iEAAiE;AACjE,eAAO,MAAM,yBAAyB,gCAAgC,CAAC;AAKvE;;;;;GAKG;AACH,wBAAgB,sBAAsB,CACpC,UAAU,EAAE,SAAS,yBAAyB,EAAE,GAC/C,UAAU,CAEZ;AAED;;;;;;;;;;;;;GAaG;AACH,wBAAgB,sBAAsB,CAAC,KAAK,EAAE,OAAO,GAAG,MAAM,CAI7D;AAED;;;;;;;;;;;;;;GAcG;AACH,wBAAgB,iBAAiB,CAAC,UAAU,EAAE,oBAAoB,GAAG,oBAAoB,CAIxF;AAED;;;;;;;;;;;;GAYG;AACH,wBAAgB,eAAe,CAC7B,EAAE,EAAE,IAAI,CAAC,kBAAkB,EAAE,KAAK,CAAC,EACnC,UAAU,EAAE,oBAAoB,GAC/B,oBAAoB,CAWtB"}
+{"version":3,"file":"assessment-store.d.ts","sourceRoot":"","sources":["../../src/nexus/assessment-store.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;GA0BG;AAIH,OAAO,KAAK,EAAE,oBAAoB,EAAE,yBAAyB,EAAE,MAAM,qBAAqB,CAAC;AAE3F,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,yBAAyB,CAAC;AAGlE,mDAAmD;AACnD,eAAO,MAAM,cAAc,qBAAqB,CAAC;AAEjD,iEAAiE;AACjE,eAAO,MAAM,yBAAyB,gCAAgC,CAAC;AAKvE;;;;;GAKG;AACH,wBAAgB,sBAAsB,CACpC,UAAU,EAAE,SAAS,yBAAyB,EAAE,GAC/C,UAAU,CAEZ;AAED;;;;;;;;;;;;;GAaG;AACH,wBAAgB,sBAAsB,CAAC,KAAK,EAAE,OAAO,GAAG,MAAM,CAI7D;AAED;;;;;;;;;;;;;;GAcG;AACH,wBAAgB,iBAAiB,CAAC,UAAU,EAAE,oBAAoB,GAAG,oBAAoB,CAIxF;AAED;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAgB,eAAe,CAC7B,EAAE,EAAE,IAAI,CAAC,kBAAkB,EAAE,KAAK,CAAC,EACnC,UAAU,EAAE,oBAAoB,GAC/B,oBAAoB,CAWtB;AAED;;;;;;GAMG;AACH,wBAAgB,gCAAgC,CAAC,EAAE,EAAE,IAAI,CAAC,kBAAkB,EAAE,QAAQ,CAAC,GAAG,OAAO,CAMhG"}

package/dist/nexus/assessment-store.js

@@ -25,8 +25,10 @@
  * @task T12348
  * @module nexus/assessment-store
  */
+import { isAbsolute } from 'node:path';
 import { gunzipSync, gzipSync } from 'node:zlib';
 import { sql } from 'drizzle-orm';
+import { encodeStoredAssessment } from './stored-roots.js';
 /** `_nexus_meta` key of the assessment summary. */
 export const ASSESSMENT_KEY = 'graph_assessment';
 /** `_nexus_meta` key of the separately stored reference list. */
@@ -93,13 +95,17 @@ export function assessmentSummary(assessment) {
  *   the stored list of that same generation.
  * - An assessment with neither removes any stale list.
  *
+ * Root paths are stored relative to the recorded project root (T12474); read
+ * them back through `readKnowledgeIndexAssessment`, which resolves them
+ * against the live project root.
+ *
  * @param tx - Graph database handle or open transaction.
- * @param assessment - Assessment to persist.
- * @returns The summary as written.
+ * @param assessment - Assessment to persist, with absolute in-memory paths.
+ * @returns The summary written, in its in-memory (absolute-path) form.
  */
 export function writeAssessment(tx, assessment) {
     const summary = assessmentSummary(assessment);
-    tx.run(sql `INSERT INTO main._nexus_meta (key, value) VALUES (${ASSESSMENT_KEY}, ${JSON.stringify(summary)})
+    tx.run(sql `INSERT INTO main._nexus_meta (key, value) VALUES (${ASSESSMENT_KEY}, ${JSON.stringify(encodeStoredAssessment(summary))})
     ON CONFLICT(key) DO UPDATE SET value = excluded.value, updated_at = strftime('%s', 'now')`);
     if (assessment.references !== undefined) {
         tx.run(sql `INSERT INTO main._nexus_meta (key, value) VALUES (${ASSESSMENT_REFERENCES_KEY}, ${encodeStoredReferences(assessment.references)})
@@ -110,4 +116,16 @@ export function writeAssessment(tx, assessment) {
     }
     return summary;
 }
+/**
+ * Whether the stored assessment still holds absolute root paths — the form
+ * written before T12474. Extracts only the two root fields.
+ *
+ * @param db - Graph database handle.
+ * @returns `true` when a legacy absolute record should be rewritten portably.
+ */
+export function storedAssessmentHasAbsoluteRoots(db) {
+    const row = db.values(sql `SELECT json_extract(value, '$.sourceRoot'), json_extract(value, '$.sourceRoots.projectRoot')
+      FROM main._nexus_meta WHERE key = ${ASSESSMENT_KEY}`)[0];
+    return (row ?? []).some((path) => typeof path === 'string' && isAbsolute(path));
+}
 //# sourceMappingURL=assessment-store.js.map

package/dist/nexus/assessment-store.js.map

@@ -1 +1 @@
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+{"version":3,"file":"assessment-store.js","sourceRoot":"","sources":["../../src/nexus/assessment-store.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;GA0BG;AAEH,OAAO,EAAE,UAAU,EAAE,MAAM,WAAW,CAAC;AACvC,OAAO,EAAE,UAAU,EAAE,QAAQ,EAAE,MAAM,WAAW,CAAC;AAEjD,OAAO,EAAE,GAAG,EAAE,MAAM,aAAa,CAAC;AAElC,OAAO,EAAE,sBAAsB,EAAE,MAAM,mBAAmB,CAAC;AAE3D,mDAAmD;AACnD,MAAM,CAAC,MAAM,cAAc,GAAG,kBAAkB,CAAC;AAEjD,iEAAiE;AACjE,MAAM,CAAC,MAAM,yBAAyB,GAAG,6BAA6B,CAAC;AAEvE,2FAA2F;AAC3F,MAAM,qBAAqB,GAAG,CAAC,CAAC;AAEhC;;;;;GAKG;AACH,MAAM,UAAU,sBAAsB,CACpC,UAAgD;IAEhD,OAAO,QAAQ,CAAC,IAAI,CAAC,SAAS,CAAC,UAAU,CAAC,EAAE,EAAE,KAAK,EAAE,qBAAqB,EAAE,CAAC,CAAC;AAChF,CAAC;AAED;;;;;;;;;;;;;GAaG;AACH,MAAM,UAAU,sBAAsB,CAAC,KAAc;IACnD,IAAI,OAAO,KAAK,KAAK,QAAQ;QAAE,OAAO,KAAK,CAAC;IAC5C,IAAI,KAAK,YAAY,UAAU;QAAE,OAAO,UAAU,CAAC,KAAK,CAAC,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;IAC3E,MAAM,IAAI,KAAK,CAAC,iEAAiE,CAAC,CAAC;AACrF,CAAC;AAED;;;;;;;;;;;;;;GAcG;AACH,MAAM,UAAU,iBAAiB,CAAC,UAAgC;IAChE,IAAI,UAAU,CAAC,UAAU,KAAK,SAAS;QAAE,OAAO,UAAU,CAAC;IAC3D,MAAM,EAAE,UAAU,EAAE,GAAG,OAAO,EAAE,GAAG,UAAU,CAAC;IAC9C,OAAO,EAAE,GAAG,OAAO,EAAE,cAAc,EAAE,UAAU,CAAC,MAAM,EAAE,CAAC;AAC3D,CAAC;AAED;;;;;;;;;;;;;;;;GAgBG;AACH,MAAM,UAAU,eAAe,CAC7B,EAAmC,EACnC,UAAgC;IAEhC,MAAM,OAAO,GAAG,iBAAiB,CAAC,UAAU,CAAC,CAAC;IAC9C,EAAE,CAAC,GAAG,CAAC,GAAG,CAAA,qDAAqD,cAAc,KAAK,IAAI,CAAC,SAAS,CAAC,sBAAsB,CAAC,OAAO,CAAC,CAAC;8FACrC,CAAC,CAAC;IAC9F,IAAI,UAAU,CAAC,UAAU,KAAK,SAAS,EAAE,CAAC;QACxC,EAAE,CAAC,GAAG,CAAC,GAAG,CAAA,qDAAqD,yBAAyB,KAAK,sBAAsB,CAAC,UAAU,CAAC,UAAU,CAAC;gGAC9C,CAAC,CAAC;IAChG,CAAC;SAAM,IAAI,OAAO,CAAC,cAAc,KAAK,SAAS,EAAE,CAAC;QAChD,EAAE,CAAC,GAAG,CAAC,GAAG,CAAA,4CAA4C,yBAAyB,EAAE,CAAC,CAAC;IACrF,CAAC;IACD,OAAO,OAAO,CAAC;AACjB,CAAC;AAED;;;;;;GAMG;AACH,MAAM,UAAU,gCAAgC,CAAC,EAAsC;IACrF,MAAM,GAAG,GAAG,EAAE,CAAC,MAAM,CACnB,GAAG,CAAA;0CACmC,cAAc,EAAE,CACvD,CAAC,CAAC,CAAC,CAAC;IACL,OAAO,CAAC,GAAG,IAAI,EAAE,CAAC,CAAC,IAAI,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,OAAO,IAAI,KAAK,QAAQ,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC;AAClF,CAAC"}

package/dist/nexus/checkout-nonce.d.ts

@@ -0,0 +1,48 @@
+/**
+ * Per-checkout nonce — the only evidence that proves a project MOVED
+ * (T12470 · ADR-094).
+ *
+ * `.cleo/project-id` is committed, so a clone, a fork or a hostile copy of the
+ * file declares a registered project's id. Git state is no better: a clone has
+ * the same root commit and remote, a bare `git init` can add any remote, and a
+ * root commit can be faked with `refs/replace`. What a clone can NOT have is
+ * local, untracked state. This module keeps a random nonce in the checkout's
+ * `.cleo/project-info.json` — never tracked (ADR-013 §9) — and the registry
+ * records it on each confirmed location. A real `mv`, or a restore of `.cleo/`
+ * from a backup, carries the nonce with it; a clone has none, or its own.
+ *
+ * @task T12470
+ * @module nexus/checkout-nonce
+ */
+/** `project-info.json` field that carries the nonce. */
+export declare const CHECKOUT_NONCE_FIELD = "checkoutNonce";
+/**
+ * Read the checkout's nonce.
+ *
+ * @param projectRoot - Checkout root (the directory containing `.cleo/`).
+ * @returns The nonce, or `null` when the checkout has none.
+ *
+ * @example
+ * ```ts
+ * const nonce = readCheckoutNonce(root);
+ * ```
+ */
+export declare function readCheckoutNonce(projectRoot: string): string | null;
+/**
+ * Return the checkout's nonce, minting one into `project-info.json` when the
+ * file exists and has none. Called only when a location is CONFIRMED, so a
+ * candidate never gains a nonce the registry would accept.
+ *
+ * Never creates `project-info.json`: a checkout without one (a fresh clone
+ * before `cleo init`) has no nonce, and its moves are confirmed explicitly.
+ *
+ * @param projectRoot - Checkout root.
+ * @returns The nonce, or `null` when there is no `project-info.json` to hold it.
+ *
+ * @example
+ * ```ts
+ * const nonce = ensureCheckoutNonce(root);
+ * ```
+ */
+export declare function ensureCheckoutNonce(projectRoot: string): string | null;
+//# sourceMappingURL=checkout-nonce.d.ts.map

package/dist/nexus/checkout-nonce.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"checkout-nonce.d.ts","sourceRoot":"","sources":["../../src/nexus/checkout-nonce.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;GAeG;AAMH,wDAAwD;AACxD,eAAO,MAAM,oBAAoB,kBAAkB,CAAC;AAmBpD;;;;;;;;;;GAUG;AACH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,MAAM,GAAG,MAAM,GAAG,IAAI,CAGpE;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAgB,mBAAmB,CAAC,WAAW,EAAE,MAAM,GAAG,MAAM,GAAG,IAAI,CAWtE"}

package/dist/nexus/checkout-nonce.js

@@ -0,0 +1,84 @@
+/**
+ * Per-checkout nonce — the only evidence that proves a project MOVED
+ * (T12470 · ADR-094).
+ *
+ * `.cleo/project-id` is committed, so a clone, a fork or a hostile copy of the
+ * file declares a registered project's id. Git state is no better: a clone has
+ * the same root commit and remote, a bare `git init` can add any remote, and a
+ * root commit can be faked with `refs/replace`. What a clone can NOT have is
+ * local, untracked state. This module keeps a random nonce in the checkout's
+ * `.cleo/project-info.json` — never tracked (ADR-013 §9) — and the registry
+ * records it on each confirmed location. A real `mv`, or a restore of `.cleo/`
+ * from a backup, carries the nonce with it; a clone has none, or its own.
+ *
+ * @task T12470
+ * @module nexus/checkout-nonce
+ */
+import { randomBytes } from 'node:crypto';
+import { existsSync, readFileSync, renameSync, writeFileSync } from 'node:fs';
+import { join } from 'node:path';
+/** `project-info.json` field that carries the nonce. */
+export const CHECKOUT_NONCE_FIELD = 'checkoutNonce';
+/** Accepted nonce shape: 32 lowercase hex characters (128 random bits). */
+const NONCE_PATTERN = /^[0-9a-f]{32}$/;
+/** Parse `<root>/.cleo/project-info.json`; `null` when absent or unparseable. */
+function readInfo(projectRoot) {
+    const path = join(projectRoot, '.cleo', 'project-info.json');
+    if (!existsSync(path))
+        return null;
+    try {
+        const parsed = JSON.parse(readFileSync(path, 'utf-8'));
+        return parsed !== null && typeof parsed === 'object' && !Array.isArray(parsed)
+            ? parsed
+            : null;
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Read the checkout's nonce.
+ *
+ * @param projectRoot - Checkout root (the directory containing `.cleo/`).
+ * @returns The nonce, or `null` when the checkout has none.
+ *
+ * @example
+ * ```ts
+ * const nonce = readCheckoutNonce(root);
+ * ```
+ */
+export function readCheckoutNonce(projectRoot) {
+    const value = readInfo(projectRoot)?.[CHECKOUT_NONCE_FIELD];
+    return typeof value === 'string' && NONCE_PATTERN.test(value) ? value : null;
+}
+/**
+ * Return the checkout's nonce, minting one into `project-info.json` when the
+ * file exists and has none. Called only when a location is CONFIRMED, so a
+ * candidate never gains a nonce the registry would accept.
+ *
+ * Never creates `project-info.json`: a checkout without one (a fresh clone
+ * before `cleo init`) has no nonce, and its moves are confirmed explicitly.
+ *
+ * @param projectRoot - Checkout root.
+ * @returns The nonce, or `null` when there is no `project-info.json` to hold it.
+ *
+ * @example
+ * ```ts
+ * const nonce = ensureCheckoutNonce(root);
+ * ```
+ */
+export function ensureCheckoutNonce(projectRoot) {
+    const existing = readCheckoutNonce(projectRoot);
+    if (existing)
+        return existing;
+    const info = readInfo(projectRoot);
+    if (!info)
+        return null;
+    const nonce = randomBytes(16).toString('hex');
+    const path = join(projectRoot, '.cleo', 'project-info.json');
+    const temp = `${path}.${randomBytes(6).toString('hex')}.tmp`;
+    writeFileSync(temp, `${JSON.stringify({ ...info, [CHECKOUT_NONCE_FIELD]: nonce }, null, 2)}\n`);
+    renameSync(temp, path);
+    return nonce;
+}
+//# sourceMappingURL=checkout-nonce.js.map

package/dist/nexus/checkout-nonce.js.map

@@ -0,0 +1 @@
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package/dist/nexus/devices.d.ts

@@ -0,0 +1,93 @@
+/**
+ * Devices (`nexus_devices`) — every machine that runs CLEO against this
+ * global store, keyed by the stable `<cleoHome>/device-id` (T9321) that
+ * `nexus_project_locations.device_id` already carries (T12469). Resolving a
+ * location's device id against this table answers "which machine, which OS,
+ * which CLEO version, and when did it last check in".
+ *
+ * The CLI calls {@link recordDeviceHeartbeat} on start. It is throttled to at
+ * most one write per {@link DEVICE_HEARTBEAT_INTERVAL_MS} per device: one
+ * primary-key read decides, and only a stale or absent row costs a single
+ * primary-key upsert. The upsert repeats the staleness test in its `WHERE`, so
+ * concurrent CLI starts cannot both write inside one interval.
+ *
+ * @task T12510
+ * @epic T12496
+ */
+import type { NexusDeviceRecord } from '@cleocode/contracts';
+import type { NodeSQLiteDatabase } from 'drizzle-orm/node-sqlite';
+/** Minimum interval between two heartbeat writes for one device. */
+export declare const DEVICE_HEARTBEAT_INTERVAL_MS = 60000;
+/** Registry handle subset the device functions need. */
+export type DeviceStoreHandle = Pick<NodeSQLiteDatabase, 'select' | 'insert'>;
+/** Descriptive facts about the device sending a heartbeat. */
+export interface DeviceFacts {
+    /** Stable device id. Defaults to {@link currentDeviceId}. */
+    deviceId?: string;
+    /** Hostname. Defaults to `os.hostname()`. */
+    hostname?: string;
+    /** OS. Defaults to `process.platform`. */
+    os?: string;
+    /** Architecture. Defaults to `process.arch`. */
+    arch?: string;
+    /** CLEO version. Defaults to the installed package version. */
+    cleoVersion?: string;
+}
+/** What {@link recordDeviceHeartbeat} did. */
+export type DeviceHeartbeatOutcome = 'written' | 'throttled';
+/**
+ * Upsert this device's `nexus_devices` row unless it was written within the
+ * last {@link DEVICE_HEARTBEAT_INTERVAL_MS}.
+ *
+ * Cost: one primary-key read; when stale, one primary-key upsert. Descriptive
+ * facts (hostname, version) are resolved only when a write happens.
+ *
+ * @param db - Global registry handle (`getNexusRegistryDb`).
+ * @param now - Heartbeat instant. Defaults to the current time.
+ * @param facts - Overrides for the recorded device facts (tests).
+ * @returns `written` when the row was inserted or refreshed, else `throttled`.
+ * @example
+ * ```ts
+ * await recordDeviceHeartbeat(await getNexusRegistryDb(getCleoHome()));
+ * ```
+ */
+export declare function recordDeviceHeartbeat(db: DeviceStoreHandle, now?: Date, facts?: DeviceFacts): Promise<DeviceHeartbeatOutcome>;
+/**
+ * List every known device, most recent heartbeat first.
+ *
+ * @param db - Global registry handle (`getNexusRegistryDb`).
+ * @returns Device records; `current` marks this device.
+ * @example
+ * ```ts
+ * const all = listNexusDevices(await getNexusRegistryDb(getCleoHome()));
+ * ```
+ */
+export declare function listNexusDevices(db: DeviceStoreHandle): NexusDeviceRecord[];
+/** Filename in `<cleoHome>` whose mtime records the last heartbeat attempt. */
+export declare const DEVICE_HEARTBEAT_STAMP = "device-heartbeat.stamp";
+/** What {@link heartbeatThisDevice} did. */
+export type DeviceStartupHeartbeatOutcome = DeviceHeartbeatOutcome | 'disabled' | 'shutting-down' | 'no-store';
+/**
+ * CLI-start heartbeat: record this device in the global store at most once
+ * per {@link DEVICE_HEARTBEAT_INTERVAL_MS}.
+ *
+ * A stamp file's mtime is checked first, so a start inside the interval costs
+ * one `stat` and never opens the database. Past the interval it opens the
+ * global registry (only if it already exists — a heartbeat never creates the
+ * store) and calls {@link recordDeviceHeartbeat}, whose own primary-key check
+ * and guarded upsert keep concurrent starts to a single write.
+ *
+ * Callers MUST treat every error as non-fatal; the CLI swallows it.
+ *
+ * @param options - `cleoHome` and `now` overrides (tests).
+ * @returns What happened.
+ * @example
+ * ```ts
+ * try { await heartbeatThisDevice(); } catch { // never fail the command }
+ * ```
+ */
+export declare function heartbeatThisDevice(options?: {
+    cleoHome?: string;
+    now?: Date;
+}): Promise<DeviceStartupHeartbeatOutcome>;
+//# sourceMappingURL=devices.d.ts.map

package/dist/nexus/devices.d.ts.map

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package/dist/nexus/devices.js

@@ -0,0 +1,141 @@
+/**
+ * Devices (`nexus_devices`) — every machine that runs CLEO against this
+ * global store, keyed by the stable `<cleoHome>/device-id` (T9321) that
+ * `nexus_project_locations.device_id` already carries (T12469). Resolving a
+ * location's device id against this table answers "which machine, which OS,
+ * which CLEO version, and when did it last check in".
+ *
+ * The CLI calls {@link recordDeviceHeartbeat} on start. It is throttled to at
+ * most one write per {@link DEVICE_HEARTBEAT_INTERVAL_MS} per device: one
+ * primary-key read decides, and only a stale or absent row costs a single
+ * primary-key upsert. The upsert repeats the staleness test in its `WHERE`, so
+ * concurrent CLI starts cannot both write inside one interval.
+ *
+ * @task T12510
+ * @epic T12496
+ */
+import { existsSync, statSync, utimesSync, writeFileSync } from 'node:fs';
+import { hostname } from 'node:os';
+import { join } from 'node:path';
+import { getCleoHome } from '@cleocode/paths';
+import { desc, eq, lt } from 'drizzle-orm';
+import { devices } from '../store/schema/nexus-schema.js';
+import { isShuttingDown } from '../teardown-signal.js';
+import { currentDeviceId } from './path-map.js';
+/** Minimum interval between two heartbeat writes for one device. */
+export const DEVICE_HEARTBEAT_INTERVAL_MS = 60_000;
+/**
+ * Upsert this device's `nexus_devices` row unless it was written within the
+ * last {@link DEVICE_HEARTBEAT_INTERVAL_MS}.
+ *
+ * Cost: one primary-key read; when stale, one primary-key upsert. Descriptive
+ * facts (hostname, version) are resolved only when a write happens.
+ *
+ * @param db - Global registry handle (`getNexusRegistryDb`).
+ * @param now - Heartbeat instant. Defaults to the current time.
+ * @param facts - Overrides for the recorded device facts (tests).
+ * @returns `written` when the row was inserted or refreshed, else `throttled`.
+ * @example
+ * ```ts
+ * await recordDeviceHeartbeat(await getNexusRegistryDb(getCleoHome()));
+ * ```
+ */
+export async function recordDeviceHeartbeat(db, now = new Date(), facts = {}) {
+    const deviceId = facts.deviceId ?? currentDeviceId();
+    const nowIso = now.toISOString();
+    const staleBefore = new Date(now.getTime() - DEVICE_HEARTBEAT_INTERVAL_MS).toISOString();
+    const existing = db
+        .select({ lastHeartbeatAt: devices.lastHeartbeatAt })
+        .from(devices)
+        .where(eq(devices.deviceId, deviceId))
+        .get();
+    if (existing && existing.lastHeartbeatAt > staleBefore)
+        return 'throttled';
+    const described = {
+        hostname: facts.hostname ?? hostname(),
+        os: facts.os ?? process.platform,
+        arch: facts.arch ?? process.arch,
+        cleoVersion: facts.cleoVersion ?? (await installedCleoVersion()),
+    };
+    const result = db
+        .insert(devices)
+        .values({ deviceId, ...described, firstSeen: nowIso, lastHeartbeatAt: nowIso })
+        .onConflictDoUpdate({
+        target: devices.deviceId,
+        set: { ...described, lastHeartbeatAt: nowIso },
+        // Race guard: a concurrent CLI start that already wrote inside this
+        // interval makes this a no-op.
+        setWhere: lt(devices.lastHeartbeatAt, staleBefore),
+    })
+        .run();
+    return result.changes > 0 ? 'written' : 'throttled';
+}
+/**
+ * List every known device, most recent heartbeat first.
+ *
+ * @param db - Global registry handle (`getNexusRegistryDb`).
+ * @returns Device records; `current` marks this device.
+ * @example
+ * ```ts
+ * const all = listNexusDevices(await getNexusRegistryDb(getCleoHome()));
+ * ```
+ */
+export function listNexusDevices(db) {
+    const self = currentDeviceId();
+    return db
+        .select()
+        .from(devices)
+        .orderBy(desc(devices.lastHeartbeatAt))
+        .all()
+        .map((row) => ({ ...row, current: row.deviceId === self }));
+}
+/** Filename in `<cleoHome>` whose mtime records the last heartbeat attempt. */
+export const DEVICE_HEARTBEAT_STAMP = 'device-heartbeat.stamp';
+/**
+ * CLI-start heartbeat: record this device in the global store at most once
+ * per {@link DEVICE_HEARTBEAT_INTERVAL_MS}.
+ *
+ * A stamp file's mtime is checked first, so a start inside the interval costs
+ * one `stat` and never opens the database. Past the interval it opens the
+ * global registry (only if it already exists — a heartbeat never creates the
+ * store) and calls {@link recordDeviceHeartbeat}, whose own primary-key check
+ * and guarded upsert keep concurrent starts to a single write.
+ *
+ * Callers MUST treat every error as non-fatal; the CLI swallows it.
+ *
+ * @param options - `cleoHome` and `now` overrides (tests).
+ * @returns What happened.
+ * @example
+ * ```ts
+ * try { await heartbeatThisDevice(); } catch { // never fail the command }
+ * ```
+ */
+export async function heartbeatThisDevice(options = {}) {
+    if (isShuttingDown())
+        return 'shutting-down';
+    if (process.env['CLEO_DISABLE_DEVICE_HEARTBEAT'] === '1')
+        return 'disabled';
+    const cleoHome = options.cleoHome ?? getCleoHome();
+    const now = options.now ?? new Date();
+    const stamp = join(cleoHome, DEVICE_HEARTBEAT_STAMP);
+    try {
+        if (now.getTime() - statSync(stamp).mtimeMs < DEVICE_HEARTBEAT_INTERVAL_MS)
+            return 'throttled';
+    }
+    catch {
+        // No stamp yet — fall through to the database check.
+    }
+    const { getNexusRegistryDb, getNexusRegistryDbPath } = await import('../store/nexus-sqlite.js');
+    if (!existsSync(getNexusRegistryDbPath(cleoHome)))
+        return 'no-store';
+    const outcome = await recordDeviceHeartbeat(await getNexusRegistryDb(cleoHome), now);
+    writeFileSync(stamp, now.toISOString());
+    utimesSync(stamp, now, now);
+    return outcome;
+}
+/** Installed CLEO version, resolved lazily so throttled starts never read it. */
+async function installedCleoVersion() {
+    const { getCleoVersion } = await import('../scaffold/ensure-config.js');
+    return getCleoVersion();
+}
+//# sourceMappingURL=devices.js.map

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+{"version":3,"file":"freshness.d.ts","sourceRoot":"","sources":["../../src/nexus/freshness.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;GAcG;AAGH,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,qBAAqB,CAAC;AAQ/D,6EAA6E;AAC7E,eAAO,MAAM,qBAAqB,uBAAuB,CAAC;AAE1D,uEAAuE;AACvE,eAAO,MAAM,8BAA8B,KAAK,CAAC;AAEjD,uDAAuD;AACvD,eAAO,MAAM,8BAA8B,QAAS,CAAC;AAKrD,qDAAqD;AACrD,MAAM,WAAW,qBAAqB;IACpC,kFAAkF;IAClF,WAAW,CAAC,EAAE,SAAS,MAAM,EAAE,CAAC;IAChC,iEAAiE;IACjE,WAAW,CAAC,EAAE,MAAM,CAAC;CACtB;AAED;;;GAGG;AACH,MAAM,WAAW,wBAAwB;IACvC,iCAAiC;IACjC,SAAS,EAAE,mBAAmB,CAAC;IAC/B,iEAAiE;IACjE,UAAU,EAAE,WAAW,CAAC,MAAM,CAAC,CAAC;CACjC;AAED;;;;;GAKG;AACH,wBAAgB,gBAAgB,CAC9B,UAAU,EAAE,wBAAwB,EACpC,KAAK,EAAE,SAAS,MAAM,EAAE,GACvB,mBAAmB,CASrB;AAED,gFAAgF;AAChF,MAAM,WAAW,sBAAsB;IACrC,uEAAuE;IACvE,OAAO,EAAE,OAAO,CAAC;IACjB,kEAAkE;IAClE,QAAQ,EAAE,MAAM,CAAC;IACjB,8FAA8F;IAC9F,QAAQ,EAAE,MAAM,CAAC;CAClB;AA6BD;;;;;;;;;;;GAWG;AACH,wBAAsB,yBAAyB,CAC7C,WAAW,EAAE,MAAM,EACnB,OAAO,GAAE,qBAA0B,GAClC,OAAO,CAAC,mBAAmB,CAAC,CAG9B;AA2GD;;;;GAIG;AACH,wBAAsB,0BAA0B,CAC9C,WAAW,EAAE,MAAM,GAClB,OAAO,CAAC,sBAAsB,CAAC,CAwBjC;AAED;;;;;;;;;;;;;;GAcG;AACH,wBAAsB,qBAAqB,CACzC,WAAW,EAAE,MAAM,EACnB,MAAM,CAAC,EAAE,sBAAsB,GAC9B,OAAO,CAAC,wBAAwB,CAAC,CA+DnC;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,gBAAgB,CAAC,IAAI,EAAE,OAAO,GAAG,MAAM,EAAE,CAyBxD;AAED;;;;;;;;GAQG;AACH,wBAAsB,4BAA4B,CAChD,WAAW,EAAE,MAAM,GAClB,OAAO,CAAC,wBAAwB,CAAC,CAoBnC;AAED;;;;;;;;;GASG;AACH,wBAAgB,sBAAsB,CAAC,OAAO,EAAE,MAAM,EAAE,SAAS,EAAE,mBAAmB,GAAG,IAAI,CA0B5F;AAED;;;;;GAKG;AACH,wBAAgB,sBAAsB,CACpC,UAAU,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EACnC,SAAS,EAAE,mBAAmB,GAC7B,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAOzB"}

package/dist/nexus/freshness.js

@@ -94,7 +94,7 @@ async function assessWithStaleSet(projectRoot, sampleLimit = 10) {
     let manifest;
     const none = new Set();
     try {
-        manifest = readFileManifest(db);
+        manifest = readFileManifest(db, projectRoot);
     }
     catch (error) {
         const freshness = {
@@ -130,10 +130,29 @@ async function assessWithStaleSet(projectRoot, sampleLimit = 10) {
         known.set(path, { size, mtimeMs, contentHash });
     const { walkRepositoryPaths } = await import('@cleocode/nexus/pipeline');
     const unreadable = [];
-    const current = await walkRepositoryPaths(manifest.sourceRoot, undefined, (report) => {
-        if (report.status === 'failed')
-            unreadable.push(report.path);
-    }, manifest.includedRepositories, { knownFiles: known });
+    let current;
+    try {
+        current = await walkRepositoryPaths(manifest.sourceRoot, undefined, (report) => {
+            if (report.status === 'failed')
+                unreadable.push(report.path);
+        }, manifest.includedRepositories, { knownFiles: known });
+    }
+    catch (error) {
+        // T12474: an unreachable source root is an unassessable index, never a crash.
+        const freshness = {
+            ...base,
+            indexed: true,
+            status: 'unknown',
+            lastIndexedAt: manifest.assessedAt,
+            fileCount: manifest.files.length,
+            staleFileCount: -1,
+            refreshEstimate: 'unknown',
+            checkMs: Math.round(performance.now() - started),
+            reason: `the recorded source root ${manifest.sourceRoot} could not be walked ` +
+                `(${error instanceof Error ? error.message : String(error)}); run ${NEXUS_REFRESH_COMMAND}`,
+        };
+        return { freshness, staleFiles: none };
+    }
     const stale = new Set(unreadable);
     const seen = new Set();
     for (const file of current) {
@@ -226,7 +245,7 @@ export async function ensureNexusIndexFresh(projectRoot, policy) {
     if (estimate !== null && estimate > effective.budgetMs)
         return skip(`estimated refresh ${Math.round(estimate / 1000)}s exceeds nexus.autoRefresh.budgetMs = ` +
             `${effective.budgetMs}; answered from the stale index`);
-    const manifest = readFileManifest(db);
+    const manifest = readFileManifest(db, projectRoot);
     const started = performance.now();
     try {
         const result = await runNexusAnalysis({

package/dist/nexus/freshness.js.map

@@ -1 +1 @@
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