npm - @cleocode/core - Versions diffs - 2026.7.2 → 2026.8.2 - Mend

@cleocode/core 2026.7.2 → 2026.8.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (297) hide show

package/dist/bootstrap.d.ts.map +1 -1
package/dist/bootstrap.js +57 -27
package/dist/bootstrap.js.map +1 -1
package/dist/conduit/local-transport.d.ts +3 -6
package/dist/conduit/local-transport.d.ts.map +1 -1
package/dist/conduit/local-transport.js +6 -7
package/dist/conduit/local-transport.js.map +1 -1
package/dist/db/index.d.ts +28 -1
package/dist/db/index.d.ts.map +1 -1
package/dist/db/index.js +28 -1
package/dist/db/index.js.map +1 -1
package/dist/docs/display-alias.js +1 -1
package/dist/docs/display-alias.js.map +1 -1
package/dist/docs/export-document.js +16292 -22315
package/dist/docs/export-document.js.map +3 -3
package/dist/docs/numbering.js +1 -1
package/dist/docs/numbering.js.map +1 -1
package/dist/docs/supersede.js +1 -1
package/dist/docs/supersede.js.map +1 -1
package/dist/goal/store.d.ts.map +1 -1
package/dist/goal/store.js.map +1 -1
package/dist/hooks/payload-schemas.d.ts +9 -9
package/dist/injection.d.ts.map +1 -1
package/dist/injection.js +44 -3
package/dist/injection.js.map +1 -1
package/dist/lifecycle/index.js +1 -1
package/dist/lifecycle/index.js.map +1 -1
package/dist/llm/pi/pi-session-storage.d.ts.map +1 -1
package/dist/llm/pi/pi-session-storage.js +6 -1
package/dist/llm/pi/pi-session-storage.js.map +1 -1
package/dist/llm/plugin-facade.js +5726 -16641
package/dist/llm/plugin-facade.js.map +3 -3
package/dist/memory/brain-backfill.js +3 -3
package/dist/memory/brain-backfill.js.map +1 -1
package/dist/memory/brain-consolidator.js +2 -2
package/dist/memory/brain-consolidator.js.map +1 -1
package/dist/memory/brain-doctor.js +1 -1
package/dist/memory/brain-doctor.js.map +1 -1
package/dist/memory/brain-health-dashboard.js +1 -1
package/dist/memory/brain-health-dashboard.js.map +1 -1
package/dist/memory/brain-lifecycle.js +10 -10
package/dist/memory/brain-lifecycle.js.map +1 -1
package/dist/memory/brain-links.d.ts +26 -2
package/dist/memory/brain-links.d.ts.map +1 -1
package/dist/memory/brain-links.js +65 -19
package/dist/memory/brain-links.js.map +1 -1
package/dist/memory/brain-maintenance.js +1 -1
package/dist/memory/brain-maintenance.js.map +1 -1
package/dist/memory/brain-page-nodes.js +4 -4
package/dist/memory/brain-page-nodes.js.map +1 -1
package/dist/memory/brain-reasoning.js +1 -1
package/dist/memory/brain-reasoning.js.map +1 -1
package/dist/memory/brain-search.js +1 -1
package/dist/memory/brain-search.js.map +1 -1
package/dist/memory/brain-similarity.js +1 -1
package/dist/memory/brain-similarity.js.map +1 -1
package/dist/memory/brain-stdp.js +6 -6
package/dist/memory/brain-stdp.js.map +1 -1
package/dist/memory/brain-sweep-executor.js +1 -1
package/dist/memory/brain-sweep-executor.js.map +1 -1
package/dist/memory/brain-writer-handlers.js +2 -2
package/dist/memory/brain-writer-handlers.js.map +1 -1
package/dist/memory/brain-writer-thread.d.ts.map +1 -1
package/dist/memory/brain-writer-thread.js +31 -40
package/dist/memory/brain-writer-thread.js.map +1 -1
package/dist/memory/claude-mem-migration.d.ts.map +1 -1
package/dist/memory/claude-mem-migration.js +9 -3
package/dist/memory/claude-mem-migration.js.map +1 -1
package/dist/memory/dialectic-evaluator.d.ts +11 -6
package/dist/memory/dialectic-evaluator.d.ts.map +1 -1
package/dist/memory/dialectic-evaluator.js +8 -2
package/dist/memory/dialectic-evaluator.js.map +1 -1
package/dist/memory/engine-compat.js +4 -4
package/dist/memory/engine-compat.js.map +1 -1
package/dist/memory/extraction-gate.js +3 -3
package/dist/memory/extraction-gate.js.map +1 -1
package/dist/memory/graph-memory-bridge.d.ts.map +1 -1
package/dist/memory/graph-memory-bridge.js +12 -10
package/dist/memory/graph-memory-bridge.js.map +1 -1
package/dist/memory/graph-queries.js +4 -4
package/dist/memory/graph-queries.js.map +1 -1
package/dist/memory/learnings.d.ts +8 -8
package/dist/memory/llm-extraction.js +1 -1
package/dist/memory/llm-extraction.js.map +1 -1
package/dist/memory/memory-bridge.js +1 -1
package/dist/memory/memory-bridge.js.map +1 -1
package/dist/memory/nexus-plasticity.js +1 -1
package/dist/memory/nexus-plasticity.js.map +1 -1
package/dist/memory/observer-reflector.js +1 -1
package/dist/memory/observer-reflector.js.map +1 -1
package/dist/memory/patterns.d.ts +14 -14
package/dist/memory/pipeline-manifest-sqlite.d.ts.map +1 -1
package/dist/memory/pipeline-manifest-sqlite.js +13 -3
package/dist/memory/pipeline-manifest-sqlite.js.map +1 -1
package/dist/memory/quality-feedback.js +4 -4
package/dist/memory/quality-feedback.js.map +1 -1
package/dist/memory/retrieval/build-retrieval-bundle.d.ts +1 -1
package/dist/memory/retrieval/build-retrieval-bundle.d.ts.map +1 -1
package/dist/memory/retrieval/build-retrieval-bundle.js.map +1 -1
package/dist/memory/retrieval/increment-citation-counts.js +1 -1
package/dist/memory/retrieval/increment-citation-counts.js.map +1 -1
package/dist/memory/retrieval/log-retrieval.js +1 -1
package/dist/memory/retrieval/log-retrieval.js.map +1 -1
package/dist/memory/retrieval/observe.d.ts.map +1 -1
package/dist/memory/retrieval/observe.js +32 -17
package/dist/memory/retrieval/observe.js.map +1 -1
package/dist/memory/retrieval/search.js +1 -1
package/dist/memory/retrieval/search.js.map +1 -1
package/dist/memory/retrieval/timeline.js +1 -1
package/dist/memory/retrieval/timeline.js.map +1 -1
package/dist/memory/session-memory.d.ts.map +1 -1
package/dist/memory/session-memory.js +35 -1
package/dist/memory/session-memory.js.map +1 -1
package/dist/memory/sleep-consolidation.js +4 -4
package/dist/memory/sleep-consolidation.js.map +1 -1
package/dist/memory/temporal-supersession.js +5 -5
package/dist/memory/temporal-supersession.js.map +1 -1
package/dist/memory/transcript-extractor.js +1 -1
package/dist/memory/transcript-extractor.js.map +1 -1
package/dist/memory/transcript-ingestor.js +1 -1
package/dist/memory/transcript-ingestor.js.map +1 -1
package/dist/memory/transcript-scanner.js +1 -1
package/dist/memory/transcript-scanner.js.map +1 -1
package/dist/nexus/living-brain.js +7 -7
package/dist/nexus/living-brain.js.map +1 -1
package/dist/nexus/migrations/M-split-graph.d.ts.map +1 -1
package/dist/nexus/migrations/M-split-graph.js +4 -1
package/dist/nexus/migrations/M-split-graph.js.map +1 -1
package/dist/nexus/sigil.d.ts +1 -2
package/dist/nexus/sigil.d.ts.map +1 -1
package/dist/nexus/tasks-bridge.js +4 -4
package/dist/nexus/tasks-bridge.js.map +1 -1
package/dist/nexus/user-profile.d.ts +1 -2
package/dist/nexus/user-profile.d.ts.map +1 -1
package/dist/orchestration/spawn-prompt.d.ts.map +1 -1
package/dist/orchestration/spawn-prompt.js +4 -2
package/dist/orchestration/spawn-prompt.js.map +1 -1
package/dist/release/reconcile.d.ts.map +1 -1
package/dist/release/reconcile.js +5 -1
package/dist/release/reconcile.js.map +1 -1
package/dist/sagas/migrate-containment.d.ts.map +1 -1
package/dist/sagas/migrate-containment.js +4 -2
package/dist/sagas/migrate-containment.js.map +1 -1
package/dist/scaffold/ensure-dirs.js +1 -1
package/dist/scaffold/ensure-dirs.js.map +1 -1
package/dist/scaffold/ensure-skills.d.ts.map +1 -1
package/dist/scaffold/ensure-skills.js +67 -0
package/dist/scaffold/ensure-skills.js.map +1 -1
package/dist/selfimprove/dhq-adapter.d.ts.map +1 -1
package/dist/selfimprove/dhq-adapter.js +6 -2
package/dist/selfimprove/dhq-adapter.js.map +1 -1
package/dist/selfimprove/fix-gen.js +5833 -16627
package/dist/selfimprove/fix-gen.js.map +3 -3
package/dist/sentient/dream-cycle.js +1 -1
package/dist/sentient/dream-cycle.js.map +1 -1
package/dist/sentient/hygiene-scan.js +1 -1
package/dist/sentient/hygiene-scan.js.map +1 -1
package/dist/sentient/propose-tick.js +3 -3
package/dist/sentient/propose-tick.js.map +1 -1
package/dist/sentient/stage-drift-tick.js +1 -1
package/dist/sentient/stage-drift-tick.js.map +1 -1
package/dist/sequence/index.js +1 -1
package/dist/sequence/index.js.map +1 -1
package/dist/store/agent-registry-store.d.ts.map +1 -1
package/dist/store/agent-registry-store.js +72 -30
package/dist/store/agent-registry-store.js.map +1 -1
package/dist/store/attachment-store.js +3 -3
package/dist/store/attachment-store.js.map +1 -1
package/dist/store/background-jobs.d.ts +1 -2
package/dist/store/background-jobs.d.ts.map +1 -1
package/dist/store/background-jobs.js.map +1 -1
package/dist/store/conduit-sqlite.d.ts +21 -1
package/dist/store/conduit-sqlite.d.ts.map +1 -1
package/dist/store/conduit-sqlite.js +43 -58
package/dist/store/conduit-sqlite.js.map +1 -1
package/dist/store/cross-db-cleanup.d.ts +38 -0
package/dist/store/cross-db-cleanup.d.ts.map +1 -1
package/dist/store/cross-db-cleanup.js +125 -0
package/dist/store/cross-db-cleanup.js.map +1 -1
package/dist/store/db-helpers.d.ts +1 -2
package/dist/store/db-helpers.d.ts.map +1 -1
package/dist/store/dual-scope-db.d.ts +343 -4
package/dist/store/dual-scope-db.d.ts.map +1 -1
package/dist/store/dual-scope-db.js +665 -262
package/dist/store/dual-scope-db.js.map +1 -1
package/dist/store/memory-accessor.d.ts +1 -1
package/dist/store/memory-accessor.d.ts.map +1 -1
package/dist/store/memory-accessor.js.map +1 -1
package/dist/store/memory-sqlite.d.ts +58 -4
package/dist/store/memory-sqlite.d.ts.map +1 -1
package/dist/store/memory-sqlite.js +70 -78
package/dist/store/memory-sqlite.js.map +1 -1
package/dist/store/migration-manager.d.ts +7 -4
package/dist/store/migration-manager.d.ts.map +1 -1
package/dist/store/migration-manager.js +10 -10
package/dist/store/migration-manager.js.map +1 -1
package/dist/store/migration-sqlite.js +1 -1
package/dist/store/migration-sqlite.js.map +1 -1
package/dist/store/nexus-sqlite.d.ts +43 -1
package/dist/store/nexus-sqlite.d.ts.map +1 -1
package/dist/store/nexus-sqlite.js +80 -116
package/dist/store/nexus-sqlite.js.map +1 -1
package/dist/store/ports/domain-binding.d.ts +233 -0
package/dist/store/ports/domain-binding.d.ts.map +1 -0
package/dist/store/ports/domain-binding.js +500 -0
package/dist/store/ports/domain-binding.js.map +1 -0
package/dist/store/ports/fk-integrity.d.ts +155 -0
package/dist/store/ports/fk-integrity.d.ts.map +1 -0
package/dist/store/ports/fk-integrity.js +182 -0
package/dist/store/ports/fk-integrity.js.map +1 -0
package/dist/store/role-accessors-impl.js +2 -2
package/dist/store/role-accessors-impl.js.map +1 -1
package/dist/store/schema/attachments.d.ts +1 -1
package/dist/store/schema/audit.d.ts +2 -2
package/dist/store/schema/background-jobs.d.ts +1 -1
package/dist/store/schema/cleo-global/agent-registry.d.ts +1 -1
package/dist/store/schema/cleo-global/models-catalog.d.ts +1 -1
package/dist/store/schema/cleo-global/skills.d.ts +2 -2
package/dist/store/schema/cleo-project/audit.d.ts +2 -2
package/dist/store/schema/cleo-project/docs.d.ts +1 -1
package/dist/store/schema/cleo-project/lifecycle.d.ts +4 -4
package/dist/store/schema/cleo-project/nexus-graph.d.ts +2 -2
package/dist/store/schema/cleo-project/provenance-rest.d.ts +3 -3
package/dist/store/schema/cleo-project/runtime.d.ts +2 -2
package/dist/store/schema/cleo-project/tasks-core-batch2.d.ts +1 -1
package/dist/store/schema/cleo-project/tasks-core.d.ts +3 -3
package/dist/store/schema/cleo-shared/brain.d.ts +5 -5
package/dist/store/schema/jsonb.js +1 -1
package/dist/store/schema/jsonb.js.map +1 -1
package/dist/store/schema/lifecycle.d.ts +4 -4
package/dist/store/schema/memory-schema.d.ts +3 -3
package/dist/store/schema/nexus-schema.d.ts +1 -1
package/dist/store/schema/provenance/releases.d.ts +3 -3
package/dist/store/schema/skills-schema.d.ts +2 -2
package/dist/store/schema/tasks.d.ts +2 -2
package/dist/store/skills-db.d.ts +20 -1
package/dist/store/skills-db.d.ts.map +1 -1
package/dist/store/skills-db.js +80 -72
package/dist/store/skills-db.js.map +1 -1
package/dist/store/sqlite-backup.js +2 -2
package/dist/store/sqlite-backup.js.map +1 -1
package/dist/store/sqlite-data-accessor.js +1 -1
package/dist/store/sqlite-data-accessor.js.map +1 -1
package/dist/store/sqlite.d.ts +73 -11
package/dist/store/sqlite.d.ts.map +1 -1
package/dist/store/sqlite.js +173 -138
package/dist/store/sqlite.js.map +1 -1
package/dist/store/tasks-sqlite.js +2 -2
package/dist/store/tasks-sqlite.js.map +1 -1
package/dist/store/validation-schemas.d.ts +35 -35
package/dist/store/writer-lease.d.ts +85 -53
package/dist/store/writer-lease.d.ts.map +1 -1
package/dist/store/writer-lease.js +194 -112
package/dist/store/writer-lease.js.map +1 -1
package/dist/system/health.d.ts +0 -4
package/dist/system/health.d.ts.map +1 -1
package/dist/system/health.js +58 -2
package/dist/system/health.js.map +1 -1
package/dist/tasks/add.d.ts.map +1 -1
package/dist/tasks/add.js +9 -2
package/dist/tasks/add.js.map +1 -1
package/dist/tasks/backfill-child-projections.d.ts.map +1 -1
package/dist/tasks/backfill-child-projections.js +3 -1
package/dist/tasks/backfill-child-projections.js.map +1 -1
package/dist/tasks/evidence.d.ts +17 -0
package/dist/tasks/evidence.d.ts.map +1 -1
package/dist/tasks/evidence.js +145 -35
package/dist/tasks/evidence.js.map +1 -1
package/dist/tasks/infer-add-params.d.ts.map +1 -1
package/dist/tasks/infer-add-params.js +6 -1
package/dist/tasks/infer-add-params.js.map +1 -1
package/dist/tasks/tool-cache.d.ts +29 -0
package/dist/tasks/tool-cache.d.ts.map +1 -1
package/dist/tasks/tool-cache.js +166 -6
package/dist/tasks/tool-cache.js.map +1 -1
package/dist/tasks/tool-resolver.d.ts +5 -1
package/dist/tasks/tool-resolver.d.ts.map +1 -1
package/dist/tasks/tool-resolver.js +28 -20
package/dist/tasks/tool-resolver.js.map +1 -1
package/dist/telemetry/index.d.ts.map +1 -1
package/dist/telemetry/index.js +4 -1
package/dist/telemetry/index.js.map +1 -1
package/dist/telemetry/sqlite.d.ts +1 -2
package/dist/telemetry/sqlite.d.ts.map +1 -1
package/dist/telemetry/sqlite.js +1 -2
package/dist/telemetry/sqlite.js.map +1 -1
package/dist/upgrade.js +2 -2
package/dist/upgrade.js.map +1 -1
package/dist/validation/doctor/checks.d.ts +23 -1
package/dist/validation/doctor/checks.d.ts.map +1 -1
package/dist/validation/doctor/checks.js +79 -19
package/dist/validation/doctor/checks.js.map +1 -1
package/dist/worktree/list.js +1 -1
package/dist/worktree/list.js.map +1 -1
package/package.json +24 -14
package/schemas/project-context.schema.json +69 -0
package/templates/workflows/release-prepare.yml.tmpl +10 -0

package/dist/memory/retrieval/timeline.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/memory/session-memory.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/memory/session-memory.js CHANGED Viewed

@@ -102,16 +102,45 @@ export async function persistSessionMemory(projectRoot, sessionId, debrief) {
     // unless actually needed
     let observeBrain;
     let linkMemoryToTask;
+    let linkPrevalidatedMemoryToTask;
+    let tasksDb;
     try {
         const retrieval = await import('./brain-retrieval.js');
         observeBrain = retrieval.observeBrain;
         const links = await import('./brain-links.js');
         linkMemoryToTask = links.linkMemoryToTask;
+        linkPrevalidatedMemoryToTask = links.linkPrevalidatedMemoryToTask;
     }
     catch (err) {
         result.errors.push(`Failed to load brain modules: ${err instanceof Error ? err.message : String(err)}`);
         return result;
     }
+    try {
+        const store = await import('../store/sqlite.js');
+        tasksDb = await store.getDb(projectRoot);
+    }
+    catch {
+        // Link-level validation will attempt a fresh task handle when this open fails.
+    }
+    const prevalidatedTaskIds = new Set();
+    if (tasksDb) {
+        const taskIds = new Set(items.flatMap((item) => (item.linkTaskId ? [item.linkTaskId] : [])));
+        const { taskExistsInTasksDb, taskExistsInTasksDbFresh } = await import('../store/cross-db-cleanup.js');
+        for (const taskId of taskIds) {
+            let taskExists = false;
+            try {
+                taskExists = await taskExistsInTasksDb(taskId, tasksDb);
+            }
+            catch {
+                // The fresh probe below handles a closed shared handle.
+            }
+            if (!taskExists) {
+                taskExists = await taskExistsInTasksDbFresh(taskId, tasksDb, projectRoot).catch(() => false);
+            }
+            if (taskExists)
+                prevalidatedTaskIds.add(taskId);
+        }
+    }
     for (const item of items) {
         // Create observation
         let obsResult = null;
@@ -133,7 +162,12 @@ export async function persistSessionMemory(projectRoot, sessionId, debrief) {
         // Create cross-link if there's a task ID
         if (item.linkTaskId && obsResult) {
             try {
-                await linkMemoryToTask(projectRoot, 'observation', obsResult.id, item.linkTaskId, 'produced_by');
+                if (prevalidatedTaskIds.has(item.linkTaskId)) {
+                    await linkPrevalidatedMemoryToTask(projectRoot, 'observation', obsResult.id, item.linkTaskId, 'produced_by');
+                }
+                else {
+                    await linkMemoryToTask(projectRoot, 'observation', obsResult.id, item.linkTaskId, 'produced_by', tasksDb);
+                }
                 result.linksCreated++;
             }
             catch (err) {

package/dist/memory/session-memory.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/memory/sleep-consolidation.js CHANGED Viewed

@@ -213,7 +213,7 @@ function cosineSimilarity(a, b) {
 async function stepMergeDuplicates(projectRoot) {
     const { getBrainDb } = await import('../store/memory-sqlite.js');
     await getBrainDb(projectRoot);
-    const nativeDb = getBrainNativeDb();
+    const nativeDb = getBrainNativeDb(projectRoot);
     if (!nativeDb)
         return { merged: 0, llmDecisions: 0 };
     let merged = 0;
@@ -330,7 +330,7 @@ async function stepMergeDuplicates(projectRoot) {
 async function stepPruneStale(projectRoot) {
     const { getBrainDb } = await import('../store/memory-sqlite.js');
     await getBrainDb(projectRoot);
-    const nativeDb = getBrainNativeDb();
+    const nativeDb = getBrainNativeDb(projectRoot);
     if (!nativeDb)
         return { pruned: 0, preserved: 0 };
     const staleCutoff = new Date(Date.now() - STALE_AGE_DAYS * 24 * 60 * 60 * 1000)
@@ -423,7 +423,7 @@ async function stepPruneStale(projectRoot) {
 async function stepStrengthenPatterns(projectRoot, contextEngine) {
     const { getBrainDb } = await import('../store/memory-sqlite.js');
     await getBrainDb(projectRoot);
-    const nativeDb = getBrainNativeDb();
+    const nativeDb = getBrainNativeDb(projectRoot);
     if (!nativeDb)
         return { synthesized: 0, patternsGenerated: 0 };
     let candidates;
@@ -519,7 +519,7 @@ async function stepStrengthenPatterns(projectRoot, contextEngine) {
 async function stepGenerateInsights(projectRoot, contextEngine) {
     const { getBrainDb } = await import('../store/memory-sqlite.js');
     await getBrainDb(projectRoot);
-    const nativeDb = getBrainNativeDb();
+    const nativeDb = getBrainNativeDb(projectRoot);
     if (!nativeDb)
         return { clustersProcessed: 0, insightsStored: 0 };
     // Fetch recent non-sleep observations (last 14 days)

package/dist/memory/sleep-consolidation.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/memory/temporal-supersession.js CHANGED Viewed

@@ -152,7 +152,7 @@ function buildNodeId(type, entryId) {
  */
 async function locateEntry(projectRoot, entryId) {
     await getBrainDb(projectRoot);
-    const nativeDb = getBrainNativeDb();
+    const nativeDb = getBrainNativeDb(projectRoot);
     if (!nativeDb)
         return null;
     for (const tc of SUPERSEDABLE_TABLES) {
@@ -195,7 +195,7 @@ export async function supersedeMemory(projectRoot, oldId, newId, reason) {
     if (oldId === newId)
         throw new Error('oldId and newId must be different entries');
     await getBrainDb(projectRoot);
-    const nativeDb = getBrainNativeDb();
+    const nativeDb = getBrainNativeDb(projectRoot);
     if (!nativeDb)
         throw new Error('brain.db is unavailable');
     const now = new Date().toISOString().replace('T', ' ').slice(0, 19);
@@ -266,7 +266,7 @@ export async function supersedeMemory(projectRoot, oldId, newId, reason) {
 export async function detectSupersession(projectRoot, newEntry) {
     try {
         await getBrainDb(projectRoot);
-        const nativeDb = getBrainNativeDb();
+        const nativeDb = getBrainNativeDb(projectRoot);
         if (!nativeDb)
             return [];
         const newLocation = await locateEntry(projectRoot, newEntry.id);
@@ -355,7 +355,7 @@ export async function detectSupersession(projectRoot, newEntry) {
  */
 export async function getSupersessionChain(projectRoot, entryId) {
     await getBrainDb(projectRoot);
-    const nativeDb = getBrainNativeDb();
+    const nativeDb = getBrainNativeDb(projectRoot);
     if (!nativeDb) {
         return { entryId, chain: [] };
     }
@@ -432,7 +432,7 @@ export async function getSupersessionChain(projectRoot, entryId) {
  */
 export async function isLatest(projectRoot, entryId) {
     await getBrainDb(projectRoot);
-    const nativeDb = getBrainNativeDb();
+    const nativeDb = getBrainNativeDb(projectRoot);
     if (!nativeDb)
         return false;
     for (const tc of SUPERSEDABLE_TABLES) {

package/dist/memory/temporal-supersession.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/memory/transcript-extractor.js CHANGED Viewed

@@ -393,7 +393,7 @@ async function checkTombstone(projectRoot, sessionId) {
             const { getBrainDb } = await import('../store/memory-sqlite.js');
             await getBrainDb(projectRoot);
         }
-        const nativeDb = getBrainNativeDb();
+        const nativeDb = getBrainNativeDb(projectRoot);
         if (!nativeDb)
             return false;
         const existing = nativeDb

package/dist/memory/transcript-extractor.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/memory/transcript-ingestor.js CHANGED Viewed

@@ -179,7 +179,7 @@ export function deriveSessionId(filePath) {
 export async function ingestEvents(blocks, cwd) {
     // Ensure DB is initialised (creates tables if first run)
     await getBrainDb(cwd);
-    const nativeDb = getBrainNativeDb();
+    const nativeDb = getBrainNativeDb(cwd);
     if (!nativeDb)
         throw new Error('brain.db not initialised');
     const stmt = nativeDb.prepare(`INSERT OR IGNORE INTO brain_transcript_events

package/dist/memory/transcript-ingestor.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ {"version":3,"file":"transcript-ingestor.js","sourceRoot":"","sources":["../../src/memory/transcript-ingestor.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;GAoBG;AAEH,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AACzC,OAAO,EAAE,OAAO,EAAE,QAAQ,EAAE,MAAM,kBAAkB,CAAC;AACrD,OAAO,EAAE,QAAQ,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AAC3C,OAAO,EAAE,UAAU,EAAE,gBAAgB,EAAE,MAAM,2BAA2B,CAAC;AAEzE,OAAO,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AACrD,OAAO,EAAE,aAAa,EAAE,MAAM,gBAAgB,CAAC;AA8B/C,8EAA8E;AAC9E,gBAAgB;AAChB,8EAA8E;AAE9E;;;;;;;;;GASG;AACH,MAAM,UAAU,gBAAgB,CAAC,GAAW,EAAE,SAAiB;IAC7D,MAAM,KAAK,GAAG,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC;IACtD,MAAM,MAAM,GAA2B,EAAE,CAAC;IAC1C,IAAI,GAAG,GAAG,CAAC,CAAC;IAEZ,KAAK,MAAM,IAAI,IAAI,KAAK,EAAE,CAAC;QACzB,IAAI,CAAC;YACH,MAAM,KAAK,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,CAA4B,CAAC;YAE1D,2BAA2B;YAC3B,IAAI,KAAK,CAAC,MAAM,CAAC,KAAK,uBAAuB;gBAAE,SAAS;YAExD,MAAM,SAAS,GAAG,KAAK,CAAC,MAAM,CAAuB,CAAC;YACtD,IAAI,CAAC,SAAS;gBAAE,SAAS;YAEzB,wBAAwB;YACxB,IAAI,SAAS,KAAK,QAAQ,EAAE,CAAC;gBAC3B,MAAM,aAAa,GAAG,KAAK,CAAC,SAAS,CAAuB,CAAC;gBAC7D,IAAI,aAAa,EAAE,CAAC;oBAClB,MAAM,CAAC,IAAI,CAAC;wBACV,SAAS;wBACT,GAAG,EAAE,GAAG,EAAE;wBACV,IAAI,EAAE,QAAQ;wBACd,SAAS,EAAE,QAAQ;wBACnB,OAAO,EAAE,aAAa;qBACvB,CAAC,CAAC;gBACL,CAAC;gBACD,SAAS;YACX,CAAC;YAED,IAAI,SAAS,KAAK,MAAM,IAAI,SAAS,KAAK,WAAW;gBAAE,SAAS;YAEhE,MAAM,OAAO,GAAG,KAAK,CAAC,SAAS,CAAwC,CAAC;YACxE,IAAI,CAAC,OAAO;gBAAE,SAAS;YAEvB,MAAM,IAAI,GAAI,OAAO,CAAC,MAAM,CAAwB,IAAI,SAAS,CAAC;YAClE,MAAM,OAAO,GAAG,OAAO,CAAC,SAAS,CAAC,CAAC;YAEnC,IAAI,OAAO,OAAO,KAAK,QAAQ,EAAE,CAAC;gBAChC,uBAAuB;gBACvB,IAAI,OAAO,CAAC,IAAI,EAAE,EAAE,CAAC;oBACnB,MAAM,CAAC,IAAI,CAAC,EAAE,SAAS,EAAE,GAAG,EAAE,GAAG,EAAE,EAAE,IAAI,EAAE,SAAS,EAAE,MAAM,EAAE,OAAO,EAAE,OAAO,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC;gBAC3F,CAAC;YACH,CAAC;iBAAM,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE,CAAC;gBAClC,sCAAsC;gBACtC,KAAK,MAAM,QAAQ,IAAI,OAAO,EAAE,CAAC;oBAC/B,IAAI,OAAO,QAAQ,KAAK,QAAQ,EAAE,CAAC;wBACjC,IAAI,QAAQ,CAAC,IAAI,EAAE,EAAE,CAAC;4BACpB,MAAM,CAAC,IAAI,CAAC;gCACV,SAAS;gCACT,GAAG,EAAE,GAAG,EAAE;gCACV,IAAI;gCACJ,SAAS,EAAE,MAAM;gCACjB,OAAO,EAAE,QAAQ,CAAC,IAAI,EAAE;6BACzB,CAAC,CAAC;wBACL,CAAC;wBACD,SAAS;oBACX,CAAC;oBACD,IAAI,OAAO,QAAQ,KAAK,QAAQ,IAAI,QAAQ,KAAK,IAAI;wBAAE,SAAS;oBAEhE,MAAM,KAAK,GAAG,QAAmC,CAAC;oBAClD,MAAM,KAAK,GAAI,KAAK,CAAC,MAAM,CAAwB,IAAI,SAAS,CAAC;oBAEjE,IAAI,UAAU,GAAG,EAAE,CAAC;oBACpB,IAAI,KAAK,KAAK,MAAM,EAAE,CAAC;wBACrB,UAAU,GAAI,KAAK,CAAC,MAAM,CAAwB,IAAI,EAAE,CAAC;oBAC3D,CAAC;yBAAM,IAAI,KAAK,KAAK,UAAU,EAAE,CAAC;wBAChC,UAAU,GAAG,IAAI,CAAC,SAAS,CAAC;4BAC1B,EAAE,EAAE,KAAK,CAAC,IAAI,CAAC;4BACf,IAAI,EAAE,KAAK,CAAC,MAAM,CAAC;4BACnB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC;yBACtB,CAAC,CAAC;oBACL,CAAC;yBAAM,IAAI,KAAK,KAAK,aAAa,EAAE,CAAC;wBACnC,UAAU,GAAG,IAAI,CAAC,SAAS,CAAC;4BAC1B,WAAW,EAAE,KAAK,CAAC,aAAa,CAAC;4BACjC,OAAO,EAAE,KAAK,CAAC,SAAS,CAAC;4BACzB,QAAQ,EAAE,KAAK,CAAC,UAAU,CAAC;yBAC5B,CAAC,CAAC;oBACL,CAAC;yBAAM,IAAI,KAAK,KAAK,UAAU,EAAE,CAAC;wBAChC,UAAU,GAAG,IAAI,CAAC,SAAS,CAAC;4BAC1B,QAAQ,EAAE,KAAK,CAAC,UAAU,CAAC;yBAC5B,CAAC,CAAC;oBACL,CAAC;yBAAM,CAAC;wBACN,iDAAiD;wBACjD,UAAU,GAAG,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC,CAAC;oBACrC,CAAC;oBAED,IAAI,UAAU,CAAC,IAAI,EAAE,EAAE,CAAC;wBACtB,MAAM,CAAC,IAAI,CAAC;4BACV,SAAS;4BACT,GAAG,EAAE,GAAG,EAAE;4BACV,IAAI;4BACJ,SAAS,EAAE,KAAK;4BAChB,OAAO,EAAE,UAAU,CAAC,IAAI,EAAE;yBAC3B,CAAC,CAAC;oBACL,CAAC;gBACH,CAAC;YACH,CAAC;QACH,CAAC;QAAC,MAAM,CAAC;YACP,uBAAuB;QACzB,CAAC;IACH,CAAC;IAED,OAAO,MAAM,CAAC;AAChB,CAAC;AAED,8EAA8E;AAC9E,kCAAkC;AAClC,8EAA8E;AAE9E;;;;;;;;GAQG;AACH,MAAM,UAAU,eAAe,CAAC,QAAgB;IAC9C,MAAM,IAAI,GAAG,QAAQ,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAC;IAC1C,gEAAgE;IAChE,MAAM,KAAK,GAAG,IAAI,CAAC,KAAK,CAAC,sBAAsB,CAAC,CAAC;IACjD,OAAO,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAE,CAAC,CAAC,CAAC,IAAI,CAAC;AAClC,CAAC;AAED,8EAA8E;AAC9E,kBAAkB;AAClB,8EAA8E;AAE9E;;;;;;;;;;;;GAYG;AACH,MAAM,CAAC,KAAK,UAAU,YAAY,CAChC,MAA8B,EAC9B,GAAY;IAEZ,yDAAyD;IACzD,MAAM,UAAU,CAAC,GAAG,CAAC,CAAC;IACtB,MAAM,QAAQ,GAAG,gBAAgB,CAAC,GAAG,CAAC,CAAC;IACvC,IAAI,CAAC,QAAQ;QAAE,MAAM,IAAI,KAAK,CAAC,0BAA0B,CAAC,CAAC;IAE3D,MAAM,IAAI,GAAG,QAAQ,CAAC,OAAO,CAC3B;;sDAEkD,CACnD,CAAC;IAEF,IAAI,QAAQ,GAAG,CAAC,CAAC;IACjB,IAAI,OAAO,GAAG,CAAC,CAAC;IAEhB,KAAK,MAAM,KAAK,IAAI,MAAM,EAAE,CAAC;QAC3B,iCAAiC;QACjC,MAAM,EAAE,OAAO,EAAE,eAAe,EAAE,QAAQ,EAAE,GAAG,aAAa,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QAC5E,MAAM,UAAU,GAAG,QAAQ,CAAC,CAAC,CAAC,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC;QAC9D,MAAM,EAAE,GAAG,UAAU,EAAE,CAAC;QAExB,MAAM,MAAM,GAAG,IAAI,CAAC,GAAG,CACrB,EAAE,EACF,KAAK,CAAC,SAAS,EACf,KAAK,CAAC,GAAG,EACT,KAAK,CAAC,IAAI,EACV,KAAK,CAAC,SAAS,EACf,eAAe,EACf,KAAK,CAAC,MAAM,IAAI,IAAI,EACpB,UAAU,CACY,CAAC;QAEzB,IAAI,MAAM,CAAC,OAAO,GAAG,CAAC,EAAE,CAAC;YACvB,QAAQ,EAAE,CAAC;QACb,CAAC;aAAM,CAAC;YACN,OAAO,EAAE,CAAC;QACZ,CAAC;IACH,CAAC;IAED,OAAO,EAAE,QAAQ,EAAE,OAAO,EAAE,CAAC;AAC/B,CAAC;AAED,8EAA8E;AAC9E,oBAAoB;AACpB,8EAA8E;AAE9E;;;;;;;;;;;GAWG;AACH,MAAM,CAAC,KAAK,UAAU,qBAAqB,CACzC,SAAmB,EACnB,GAAY;IAEZ,MAAM,QAAQ,GAAa,EAAE,CAAC;IAC9B,MAAM,UAAU,GAAa,EAAE,CAAC;IAChC,IAAI,YAAY,GAAG,CAAC,CAAC;IACrB,IAAI,WAAW,GAAG,CAAC,CAAC;IAEpB,KAAK,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package/dist/memory/transcript-scanner.js CHANGED Viewed

@@ -69,7 +69,7 @@ export async function scanPendingTranscripts(projectRoot) {
     try {
         const { getBrainDb, getBrainNativeDb } = await import('../store/memory-sqlite.js');
         await getBrainDb(projectRoot);
-        const db = getBrainNativeDb();
+        const db = getBrainNativeDb(projectRoot);
         if (!db)
             return [];
         // Find all pending records that don't yet have a corresponding extracted tombstone

package/dist/memory/transcript-scanner.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/nexus/living-brain.js CHANGED Viewed

@@ -187,7 +187,7 @@ export async function getSymbolFullContext(symbolId, projectRoot) {
     // ---- BRAIN substrate ----
     try {
         await getBrainDb(projectRoot);
-        const brainNative = getBrainNativeDb();
+        const brainNative = getBrainNativeDb(projectRoot);
         if (brainNative) {
             // Query brain_page_edges for all edges connecting to this symbol
             // Covers: code_reference (memory→symbol), documents (decision→symbol),
@@ -266,7 +266,7 @@ export async function getSymbolFullContext(symbolId, projectRoot) {
     // ---- SENTIENT substrate ----
     try {
         await getBrainDb(projectRoot);
-        const brainNative = getBrainNativeDb();
+        const brainNative = getBrainNativeDb(projectRoot);
         if (brainNative) {
             // Query proposed tasks in tasks.db is not directly accessible here,
             // so we query the brain_page_nodes for sentient-tier2 nodes whose
@@ -370,7 +370,7 @@ export async function getTaskCodeImpact(taskId, projectRoot) {
         // Try to infer from task_touches_symbol edges
         try {
             await getBrainDb(projectRoot);
-            const brainNative = getBrainNativeDb();
+            const brainNative = getBrainNativeDb(projectRoot);
             await getNexusDb();
             const nexusNative = getNexusNativeDb();
             if (brainNative && nexusNative) {
@@ -489,7 +489,7 @@ export async function getTaskCodeImpact(taskId, projectRoot) {
     // ---- Brain observations with modified_by edges to task files ----
     try {
         await getBrainDb(projectRoot);
-        const brainNative = getBrainNativeDb();
+        const brainNative = getBrainNativeDb(projectRoot);
         await getNexusDb();
         const nexusNative = getNexusNativeDb();
         if (brainNative && nexusNative && result.files.length > 0) {
@@ -535,7 +535,7 @@ export async function getTaskCodeImpact(taskId, projectRoot) {
     // ---- Decisions from brain_memory_links ----
     try {
         await getBrainDb(projectRoot);
-        const brainNative = getBrainNativeDb();
+        const brainNative = getBrainNativeDb(projectRoot);
         if (brainNative) {
             const linkRows = typedAll(brainNative.prepare(`SELECT memory_id, memory_type, task_id, link_type
            FROM brain_memory_links
@@ -590,7 +590,7 @@ export async function getBrainEntryCodeAnchors(entryId, projectRoot) {
     ];
     try {
         await getBrainDb(projectRoot);
-        const brainNative = getBrainNativeDb();
+        const brainNative = getBrainNativeDb(projectRoot);
         await getNexusDb();
         const nexusNative = getNexusNativeDb();
         if (!brainNative || !nexusNative)
@@ -773,7 +773,7 @@ export async function reasonImpactOfChange(symbolId, projectRoot) {
     // ---- Brain risk notes via code_reference / documents / modified_by edges ----
     try {
         await getBrainDb(projectRoot);
-        const brainNative = getBrainNativeDb();
+        const brainNative = getBrainNativeDb(projectRoot);
         if (brainNative) {
             const riskEdgeTypes = [
                 EDGE_TYPES.CODE_REFERENCE,